ZCCHC16 6989

Name: ZCCHC16	Sequence: fasta or formatted (310aa)		NCBI GI: 167466262
Description: zinc finger, CCHC domain containing 16		Referenced in: DNA Transposon and Retrovirus-related Sequences Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.8 21 1 C cysteine 2.6 8 1 D aspartate 5.2 16 1 E glutamate 5.8 18 2 F phenylalanine 3.9 12 2 G glycine 3.2 10 1 H histidine 2.6 8 1 I isoleucine 3.9 12 2 K lysine 5.5 17 2 L leucine 12.3 38 2 M methionine 2.6 8 2 N asparagine 5.2 16 2 P proline 7.4 23 3 Q glutamine 11.0 34 2 R arginine 2.9 9 1 S serine 7.4 23 3 T threonine 8.4 26 2 V valine 1.9 6 1 W tryptophan 0.0 0 0 Y tyrosine 1.6 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 zinc finger, CCHC domain containing 16 ZCCHC5 0.111 zinc finger, CCHC domain containing 5 PEG10 0.100 paternally expressed 10 isoform RF1 PEG10 0.095 paternally expressed 10 isoform RF1/2 RGAG4 0.048 retrotransposon gag domain containing 4 COBLL1 0.017 COBL-like 1 HIPK2 0.013 homeodomain interacting protein kinase 2 isoform 2 ... HIPK2 0.013 homeodomain interacting protein kinase 2 isoform 1 ... TMEM163 0.012 transmembrane protein 163 LDOC1L 0.010 leucine zipper, down-regulated in cancer 1-like [Hom... NES 0.008 nestin KIAA1967 0.008 p30 DBC protein KIAA1967 0.008 p30 DBC protein LDOC1 0.008 leucine zipper, down-regulated in cancer 1 LOC100133567 0.007 PREDICTED: similar to Rap guanine nucleotide exchan... CCDC27 0.007 coiled-coil domain containing 27 SERPINE3 0.007 nexin-related serine protease inhibitor C1orf27 0.007 hypothetical protein LOC54953 EMILIN2 0.007 elastin microfibril interfacer 2 RAPGEF2 0.007 Rap guanine nucleotide exchange factor 2 FOXJ3 0.007 forkhead box J3 ABI2 0.007 abl interactor 2 GOLGA3 0.007 Golgi autoantigen, golgin subfamily a, 3 SPDYE6 0.005 speedy homolog E6 LOC442609 0.005 PREDICTED: similar to speedy homolog A isoform 1 [H... SPDYE6 0.005 PREDICTED: speedy homolog E6 LOC442609 0.005 PREDICTED: similar to speedy homolog A isoform 7 [H... SPDYE2 0.005 speedy homolog E2 PLXND1 0.005 plexin D1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.