Search of human proteins with 166706909

Search of human proteins with 166706909

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|166706909 interferon-induced protein 44-like [Homo sapiens]
         (452 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|166706909 interferon-induced protein 44-like [Homo sapiens]        905   0.0  
gi|166706911 interferon-induced, hepatitis C-associated microtub...   352   3e-97
gi|8922873 GTPase, IMAP family member 4 [Homo sapiens]                 33   0.41 
gi|4557481 ATP-binding cassette, sub-family C (CFTR/MRP), member...    32   1.2  
gi|23397516 GTPase, IMAP family member 7 [Homo sapiens]                32   1.5  
gi|29788987 solute carrier family 24 member 4 isoform 3 [Homo sa...    31   2.6  
gi|29788985 solute carrier family 24 member 4 isoform 2 precurso...    31   2.6  
gi|24111228 solute carrier family 24 member 4 isoform 1 precurso...    31   2.6  
gi|28416431 GTPase, IMAP family member 2 [Homo sapiens]                30   3.4  
gi|164698504 septin 9 isoform f [Homo sapiens]                         30   5.9  
gi|164698502 septin 9 isoform d [Homo sapiens]                         30   5.9  
gi|164698500 septin 9 isoform e [Homo sapiens]                         30   5.9  
gi|164698498 septin 9 isoform b [Homo sapiens]                         30   5.9  
gi|164698496 septin 9 isoform e [Homo sapiens]                         30   5.9  
gi|164698494 septin 9 isoform a [Homo sapiens]                         30   5.9  
gi|116256489 septin 9 isoform c [Homo sapiens]                         30   5.9  
gi|193082993 GTP binding protein 3 (mitochondrial) isoform III [...    29   7.7  
gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Ho...    29   7.7  
gi|115511049 guanine nucleotide binding protein (G protein), alp...    29   7.7  
gi|156104883 guanine nucleotide binding protein (G protein), alp...    29   7.7  
gi|28416956 GTPase, IMAP family member 8 [Homo sapiens]                29   7.7  
gi|11036656 protocadherin beta 7 precursor [Homo sapiens]              29   7.7  
gi|5803145 ralA binding protein 1 [Homo sapiens]                       29   10.0 
gi|156071465 Rho GTPase activating protein 4 [Homo sapiens]            29   10.0 

>gi|166706909 interferon-induced protein 44-like [Homo sapiens]
          Length = 452

 Score =  905 bits (2339), Expect = 0.0
 Identities = 452/452 (100%), Positives = 452/452 (100%)

Query: 1   MEVTTRLTWNDENHLRKLLGNVSLSLLYKSSVHGGSIEDMVERCSRQGCTITMAYIDYNM 60
           MEVTTRLTWNDENHLRKLLGNVSLSLLYKSSVHGGSIEDMVERCSRQGCTITMAYIDYNM
Sbjct: 1   MEVTTRLTWNDENHLRKLLGNVSLSLLYKSSVHGGSIEDMVERCSRQGCTITMAYIDYNM 60

Query: 61  IVAFMLGNYINLHESSTEPNDSLWFSLQKKNDTTEIETLLLNTAPKIIDEQLVCRLSKTD 120
           IVAFMLGNYINLHESSTEPNDSLWFSLQKKNDTTEIETLLLNTAPKIIDEQLVCRLSKTD
Sbjct: 61  IVAFMLGNYINLHESSTEPNDSLWFSLQKKNDTTEIETLLLNTAPKIIDEQLVCRLSKTD 120

Query: 121 IFIICRDNKIYLDKMITRNLKLRFYGHRQYLECEVFRVEGIKDNLDDIKRIIKAREHRNR 180
           IFIICRDNKIYLDKMITRNLKLRFYGHRQYLECEVFRVEGIKDNLDDIKRIIKAREHRNR
Sbjct: 121 IFIICRDNKIYLDKMITRNLKLRFYGHRQYLECEVFRVEGIKDNLDDIKRIIKAREHRNR 180

Query: 181 LLADIRDYRPYADLVSEIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITE 240
           LLADIRDYRPYADLVSEIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITE
Sbjct: 181 LLADIRDYRPYADLVSEIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITE 240

Query: 241 RYRIYSVKDGKNGKSLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPIT 300
           RYRIYSVKDGKNGKSLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPIT
Sbjct: 241 RYRIYSVKDGKNGKSLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPIT 300

Query: 301 PEHSTFITSPSLKDRIHCVAYVLDINSIDNLYSKMLAKVKQVHKEVLNCGIAYVALLTKV 360
           PEHSTFITSPSLKDRIHCVAYVLDINSIDNLYSKMLAKVKQVHKEVLNCGIAYVALLTKV
Sbjct: 301 PEHSTFITSPSLKDRIHCVAYVLDINSIDNLYSKMLAKVKQVHKEVLNCGIAYVALLTKV 360

Query: 361 DDCSEVLQDNFLNMSRSMTSQSRVMNVHKMLGIPISNILMVGNYASDLELDPMKDILILS 420
           DDCSEVLQDNFLNMSRSMTSQSRVMNVHKMLGIPISNILMVGNYASDLELDPMKDILILS
Sbjct: 361 DDCSEVLQDNFLNMSRSMTSQSRVMNVHKMLGIPISNILMVGNYASDLELDPMKDILILS 420

Query: 421 ALRQMLRAADDFLEDLPLEETGAIERALQPCI 452
           ALRQMLRAADDFLEDLPLEETGAIERALQPCI
Sbjct: 421 ALRQMLRAADDFLEDLPLEETGAIERALQPCI 452


>gi|166706911 interferon-induced, hepatitis C-associated
           microtubular aggregate protein [Homo sapiens]
          Length = 444

 Score =  352 bits (904), Expect = 3e-97
 Identities = 205/455 (45%), Positives = 287/455 (63%), Gaps = 20/455 (4%)

Query: 1   MEVTTRLTWNDENHLRKLLGNVSLSLLYKSSVHGGSIEDMVERCSRQGCTITMAYIDYNM 60
           M VTTRLTW  E  L+   G   LSLLYK SVHG     +++RC  QG T+T+ Y + ++
Sbjct: 1   MAVTTRLTWLHEKILQNHFGGKRLSLLYKGSVHGFRNGVLLDRCCNQGPTLTVIYSEDHI 60

Query: 61  IVAFMLGNYINLHESSTEPNDSLWFSLQKKNDTTEIETLLLNTAPKIIDEQLVCRLSK-- 118
           I A+   +Y     +S      + F+LQ   DT   E  L    P+ +     C ++K  
Sbjct: 61  IGAYAEESYQEGKYASI-----ILFALQ---DTKISEWKLGLCTPETL---FCCDVTKYN 109

Query: 119 --TDIFIICRDNKIYLDKMITRNLKLRFYGHRQYLECEVFRVEGIKDNLDDIKRIIKARE 176
             T+  I  R+ K+ +D     NL L         + EVFR E   D+LD+ ++I    E
Sbjct: 110 SPTNFQIDGRNRKVIMDLKTMENLGLAQNCTISIQDYEVFRCE---DSLDE-RKIKGVIE 165

Query: 177 HRNRLLADIRDYRPYADLVSEIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDIT 236
            R  LL+ +R Y PY  LV +IRILL+GP+G+GKSSFFNSV+S+F GHVT QA+VG++ T
Sbjct: 166 LRKSLLSALRTYEPYGSLVQQIRILLLGPIGAGKSSFFNSVRSVFQGHVTHQALVGTNTT 225

Query: 237 SITERYRIYSVKDGKNGKSLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSR 296
            I+E+YR YS++DGK+GK LPF+LCD++GL   EG GLC DDI +IL G + DRYQFN  
Sbjct: 226 GISEKYRTYSIRDGKDGKYLPFILCDSLGLSEKEG-GLCRDDIFYILNGNIRDRYQFNPM 284

Query: 297 KPITPEHSTFITSPSLKDRIHCVAYVLDINSIDNLYSKMLAKVKQVHKEVLNCGIAYVAL 356
           + I   H  +I SPSLKDRIHCVA+V D +SI    S+M+ K+K++ +E++N G+ +VAL
Sbjct: 285 ESIKLNHHDYIDSPSLKDRIHCVAFVFDASSIQYFSSQMIVKIKRIRRELVNAGVVHVAL 344

Query: 357 LTKVDDCSEVLQDNFLNMSRSMTSQSRVMNVHKMLGIPISNILMVGNYASDLELDPMKDI 416
           LT VD    + + + + + R    +S++  V + LG  +S+I +V NY+S+ ELDP+KD+
Sbjct: 345 LTHVDSMDLITKGDLIEIERCEPVRSKLEEVQRKLGFALSDISVVSNYSSEWELDPVKDV 404

Query: 417 LILSALRQMLRAADDFLEDLPLEETGAIERALQPC 451
           LILSALR+ML AADDFLEDLP E+ G +   +  C
Sbjct: 405 LILSALRRMLWAADDFLEDLPFEQIGNLREEIINC 439


>gi|8922873 GTPase, IMAP family member 4 [Homo sapiens]
          Length = 329

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 14/77 (18%)

Query: 196 SEIRILLVGPVGSGKSSFFNSV--KSIFHGHVTGQAVVGSDITSITERYRIYSVKDGKNG 253
           S++RI+LVG  G+GKS+  NS+  + +FH         G+   SIT++      K   + 
Sbjct: 29  SQLRIVLVGKTGAGKSATGNSILGRKVFHS--------GTAAKSITKKCE----KRSSSW 76

Query: 254 KSLPFMLCDTMGLDGAE 270
           K    ++ DT G+   E
Sbjct: 77  KETELVVVDTPGIFDTE 93


>gi|4557481 ATP-binding cassette, sub-family C (CFTR/MRP), member 2
           [Homo sapiens]
          Length = 1545

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 5/47 (10%)

Query: 183 ADIRDYRPYADLVSEIRILLVGPVGSGKSSFFNSV---KSIFHGHVT 226
           A +RD     D+++   + ++GPVGSGKSS  +++       HGH+T
Sbjct: 652 ATVRDVN--LDIMAGQLVAVIGPVGSGKSSLISAMLGEMENVHGHIT 696


>gi|23397516 GTPase, IMAP family member 7 [Homo sapiens]
          Length = 300

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 2/35 (5%)

Query: 198 IRILLVGPVGSGKSSFFNSV--KSIFHGHVTGQAV 230
           +RI+LVG  GSGKS+  N++  + IF   +  QAV
Sbjct: 9   LRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAV 43


>gi|29788987 solute carrier family 24 member 4 isoform 3 [Homo
           sapiens]
          Length = 558

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 350 GIAYVALLTKVDDCSE---VLQDNFLNMSRSMTSQSRVMNVHKMLGIPISNILMVGNYAS 406
           GI ++A  T V DC     V +    +M+ S T  S V ++   LG+P     MV NY S
Sbjct: 426 GITFLAAGTSVPDCMASLIVARQGLGDMAVSNTIGSNVFDILVGLGVPWGLQTMVVNYGS 485

Query: 407 DLELD 411
            ++++
Sbjct: 486 TVKIN 490


>gi|29788985 solute carrier family 24 member 4 isoform 2 precursor
           [Homo sapiens]
          Length = 586

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 350 GIAYVALLTKVDDCSE---VLQDNFLNMSRSMTSQSRVMNVHKMLGIPISNILMVGNYAS 406
           GI ++A  T V DC     V +    +M+ S T  S V ++   LG+P     MV NY S
Sbjct: 454 GITFLAAGTSVPDCMASLIVARQGLGDMAVSNTIGSNVFDILVGLGVPWGLQTMVVNYGS 513

Query: 407 DLELD 411
            ++++
Sbjct: 514 TVKIN 518


>gi|24111228 solute carrier family 24 member 4 isoform 1 precursor
           [Homo sapiens]
          Length = 605

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)

Query: 350 GIAYVALLTKVDDCSE---VLQDNFLNMSRSMTSQSRVMNVHKMLGIPISNILMVGNYAS 406
           GI ++A  T V DC     V +    +M+ S T  S V ++   LG+P     MV NY S
Sbjct: 473 GITFLAAGTSVPDCMASLIVARQGLGDMAVSNTIGSNVFDILVGLGVPWGLQTMVVNYGS 532

Query: 407 DLELD 411
            ++++
Sbjct: 533 TVKIN 537


>gi|28416431 GTPase, IMAP family member 2 [Homo sapiens]
          Length = 337

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)

Query: 196 SEIRILLVGPVGSGKSSFFNSV--KSIFHGHVTGQAV 230
           SE+RI+LVG  G+GKS+  NS+  K  F   +  Q +
Sbjct: 21  SELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTL 57


>gi|164698504 septin 9 isoform f [Homo sapiens]
          Length = 335

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 18/153 (11%)

Query: 197 EIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITERYRIYSVKDG--KNGK 254
           E  I++VG  G GKS+  N   ++F   ++ ++V  +    I +   I S+     + G 
Sbjct: 47  EFNIMVVGQSGLGKSTLIN---TLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGV 103

Query: 255 SLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPITPEHSTFITSPSLKD 314
            +   + DT G         C   I   +     D+Y+   ++ +       I       
Sbjct: 104 RMKLTVIDTPGFGDHINNENCWQPIMKFIN----DQYEKYLQEEVNINRKKRIPD----T 155

Query: 315 RIHCVAYVL-----DINSIDNLYSKMLAKVKQV 342
           R+HC  Y +      +  +D  + K L+KV  +
Sbjct: 156 RVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI 188


>gi|164698502 septin 9 isoform d [Homo sapiens]
          Length = 474

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 18/153 (11%)

Query: 197 EIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITERYRIYSVKDG--KNGK 254
           E  I++VG  G GKS+  N   ++F   ++ ++V  +    I +   I S+     + G 
Sbjct: 186 EFNIMVVGQSGLGKSTLIN---TLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGV 242

Query: 255 SLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPITPEHSTFITSPSLKD 314
            +   + DT G         C   I   +     D+Y+   ++ +       I       
Sbjct: 243 RMKLTVIDTPGFGDHINNENCWQPIMKFIN----DQYEKYLQEEVNINRKKRIPD----T 294

Query: 315 RIHCVAYVL-----DINSIDNLYSKMLAKVKQV 342
           R+HC  Y +      +  +D  + K L+KV  +
Sbjct: 295 RVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI 327


>gi|164698500 septin 9 isoform e [Homo sapiens]
          Length = 422

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 18/153 (11%)

Query: 197 EIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITERYRIYSVKDG--KNGK 254
           E  I++VG  G GKS+  N   ++F   ++ ++V  +    I +   I S+     + G 
Sbjct: 134 EFNIMVVGQSGLGKSTLIN---TLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGV 190

Query: 255 SLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPITPEHSTFITSPSLKD 314
            +   + DT G         C   I   +     D+Y+   ++ +       I       
Sbjct: 191 RMKLTVIDTPGFGDHINNENCWQPIMKFIN----DQYEKYLQEEVNINRKKRIPD----T 242

Query: 315 RIHCVAYVL-----DINSIDNLYSKMLAKVKQV 342
           R+HC  Y +      +  +D  + K L+KV  +
Sbjct: 243 RVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI 275


>gi|164698498 septin 9 isoform b [Homo sapiens]
          Length = 579

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 18/153 (11%)

Query: 197 EIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITERYRIYSVKDG--KNGK 254
           E  I++VG  G GKS+  N   ++F   ++ ++V  +    I +   I S+     + G 
Sbjct: 291 EFNIMVVGQSGLGKSTLIN---TLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGV 347

Query: 255 SLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPITPEHSTFITSPSLKD 314
            +   + DT G         C   I   +     D+Y+   ++ +       I       
Sbjct: 348 RMKLTVIDTPGFGDHINNENCWQPIMKFIN----DQYEKYLQEEVNINRKKRIPD----T 399

Query: 315 RIHCVAYVL-----DINSIDNLYSKMLAKVKQV 342
           R+HC  Y +      +  +D  + K L+KV  +
Sbjct: 400 RVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI 432


>gi|164698496 septin 9 isoform e [Homo sapiens]
          Length = 422

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 18/153 (11%)

Query: 197 EIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITERYRIYSVKDG--KNGK 254
           E  I++VG  G GKS+  N   ++F   ++ ++V  +    I +   I S+     + G 
Sbjct: 134 EFNIMVVGQSGLGKSTLIN---TLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGV 190

Query: 255 SLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPITPEHSTFITSPSLKD 314
            +   + DT G         C   I   +     D+Y+   ++ +       I       
Sbjct: 191 RMKLTVIDTPGFGDHINNENCWQPIMKFIN----DQYEKYLQEEVNINRKKRIPD----T 242

Query: 315 RIHCVAYVL-----DINSIDNLYSKMLAKVKQV 342
           R+HC  Y +      +  +D  + K L+KV  +
Sbjct: 243 RVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI 275


>gi|164698494 septin 9 isoform a [Homo sapiens]
          Length = 586

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 18/153 (11%)

Query: 197 EIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITERYRIYSVKDG--KNGK 254
           E  I++VG  G GKS+  N   ++F   ++ ++V  +    I +   I S+     + G 
Sbjct: 298 EFNIMVVGQSGLGKSTLIN---TLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGV 354

Query: 255 SLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPITPEHSTFITSPSLKD 314
            +   + DT G         C   I   +     D+Y+   ++ +       I       
Sbjct: 355 RMKLTVIDTPGFGDHINNENCWQPIMKFIN----DQYEKYLQEEVNINRKKRIPD----T 406

Query: 315 RIHCVAYVL-----DINSIDNLYSKMLAKVKQV 342
           R+HC  Y +      +  +D  + K L+KV  +
Sbjct: 407 RVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI 439


>gi|116256489 septin 9 isoform c [Homo sapiens]
          Length = 568

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 18/153 (11%)

Query: 197 EIRILLVGPVGSGKSSFFNSVKSIFHGHVTGQAVVGSDITSITERYRIYSVKDG--KNGK 254
           E  I++VG  G GKS+  N   ++F   ++ ++V  +    I +   I S+     + G 
Sbjct: 280 EFNIMVVGQSGLGKSTLIN---TLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGV 336

Query: 255 SLPFMLCDTMGLDGAEGAGLCMDDIPHILKGCMPDRYQFNSRKPITPEHSTFITSPSLKD 314
            +   + DT G         C   I   +     D+Y+   ++ +       I       
Sbjct: 337 RMKLTVIDTPGFGDHINNENCWQPIMKFIN----DQYEKYLQEEVNINRKKRIPD----T 388

Query: 315 RIHCVAYVL-----DINSIDNLYSKMLAKVKQV 342
           R+HC  Y +      +  +D  + K L+KV  +
Sbjct: 389 RVHCCLYFIPATGHSLRPLDIEFMKRLSKVVNI 421


>gi|193082993 GTP binding protein 3 (mitochondrial) isoform III
           [Homo sapiens]
          Length = 471

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)

Query: 159 EGIKDNLDDIKRIIKAREHRNRLLADIRDYRPYADLVSEIRILLVGPVGSGKSSFFN 215
           EG+ +  D     I+ R  +  L A +RD R    L S + +++ GP  +GKSS  N
Sbjct: 216 EGVLEQAD-----IEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVN 267


>gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Homo
           sapiens]
          Length = 492

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)

Query: 159 EGIKDNLDDIKRIIKAREHRNRLLADIRDYRPYADLVSEIRILLVGPVGSGKSSFFN 215
           EG+ +  D     I+ R  +  L A +RD R    L S + +++ GP  +GKSS  N
Sbjct: 216 EGVLEQAD-----IEVRALQVALGAHLRDARRGQRLRSGVHVVVTGPPNAGKSSLVN 267


>gi|115511049 guanine nucleotide binding protein (G protein), alpha
           11 (Gq class) [Homo sapiens]
          Length = 359

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 9/63 (14%)

Query: 161 IKDNLDDIKRIIKAREHRNRLLADIRDYRPYADLVSEIRILLVGPVGSGKSSFFNSVKSI 220
           + D + + KRI    E   +L  D RD R       E+++LL+G   SGKS+F   ++ I
Sbjct: 11  LSDEVKESKRI--NAEIEKQLRRDKRDAR------RELKLLLLGTGESGKSTFIKQMR-I 61

Query: 221 FHG 223
            HG
Sbjct: 62  IHG 64


>gi|156104883 guanine nucleotide binding protein (G protein), alpha
           15 (Gq class) [Homo sapiens]
          Length = 374

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)

Query: 166 DDIKRIIKAREHRNRLLADIRDYRPYADLVSEIRILLVGPVGSGKSSFFNSVKSIFHG 223
           +D K   +  +  NR+L + +          E+++LL+GP  SGKS+F   ++ I HG
Sbjct: 16  EDEKAAARVDQEINRILLEQKKQDR-----GELKLLLLGPGESGKSTFIKQMR-IIHG 67


>gi|28416956 GTPase, IMAP family member 8 [Homo sapiens]
          Length = 665

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)

Query: 195 VSEIRILLVGPVGSGKSSFFNSV--KSIFHGHVTGQAVV 231
           +SE+R+LL+G   SGKS+  N++  K +F    + Q V+
Sbjct: 8   MSELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVI 46


>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
          Length = 793

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 11/70 (15%)

Query: 268 GAEGAGLC--MDDIPHILKGCMPDRYQFNSRKPITPEHS---------TFITSPSLKDRI 316
           G  G  +C   DD+P ILK  + + Y   + KP+  E +         T + +P LK   
Sbjct: 376 GNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNITITVTDLGTPRLKTEH 435

Query: 317 HCVAYVLDIN 326
           +    V D+N
Sbjct: 436 NITVLVSDVN 445


>gi|5803145 ralA binding protein 1 [Homo sapiens]
          Length = 655

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 6/47 (12%)

Query: 145 YGHRQYLECE-VFRVEGIKDNLDDIKRIIKAREHRNRLLADIRDYRP 190
           Y  +  ++CE ++RV GIK  +D++K      E  N     + DY P
Sbjct: 219 YVEKYGMKCEGIYRVSGIKSKVDELKAAYDREESTN-----LEDYEP 260


>gi|156071465 Rho GTPase activating protein 4 [Homo sapiens]
          Length = 946

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 8/94 (8%)

Query: 302 EHSTFITSPSLKDRIHCVAYVLDINSIDNLYSKMLAKVKQVHKEVLNCGIAYVA-----L 356
           EH +F   PSL   +HC A +L         S+  A + +V    L   ++++A     L
Sbjct: 86  EHQSFRKEPSLLSPLHCWAVLLQHT---RQQSRESAALSEVLAGPLAQRLSHIAEDVGRL 142

Query: 357 LTKVDDCSEVLQDNFLNMSRSMTSQSRVMNVHKM 390
           + K  D  + LQD  L +   + +  +    + M
Sbjct: 143 VKKSRDLEQQLQDELLEVVSELQTAKKTYQAYHM 176


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,573,619
Number of Sequences: 37866
Number of extensions: 650897
Number of successful extensions: 1690
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1683
Number of HSP's gapped (non-prelim): 27
length of query: 452
length of database: 18,247,518
effective HSP length: 106
effective length of query: 346
effective length of database: 14,233,722
effective search space: 4924867812
effective search space used: 4924867812
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.