Guide to the Human Genome
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Name: IFI44L Sequence: fasta or formatted (452aa) NCBI GI: 166706909
Description:

interferon-induced protein 44-like

Referenced in:

Interferon

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         19           2
 C cysteine            2.7         12           1
 D aspartate           7.5         34           2
 E glutamate           5.3         24           2
 F phenylalanine       2.9         13           2
 G glycine             5.3         24           2
 H histidine           2.7         12           1
 I isoleucine          8.6         39           2
 K lysine              6.0         27           2
 L leucine            11.5         52           3
 M methionine          4.0         18           1
 N asparagine          5.3         24           1
 P proline             3.1         14           1
 Q glutamine           2.4         11           1
 R arginine            6.0         27           1
 S serine              7.7         35           2
 T threonine           4.9         22           2
 V valine              6.0         27           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.5         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interferon-induced protein 44-like 
IFI44                 0.372   interferon-induced, hepatitis C-associated microtub...
GIMAP4                0.009   GTPase, IMAP family member 4 
ABCC2                 0.008   ATP-binding cassette, sub-family C (CFTR/MRP), member...
GIMAP7                0.008   GTPase, IMAP family member 7 
SLC24A4               0.007   solute carrier family 24 member 4 isoform 3 
SLC24A4               0.007   solute carrier family 24 member 4 isoform 2 precurso...
SLC24A4               0.007   solute carrier family 24 member 4 isoform 1 precurso...
GIMAP2                0.006   GTPase, IMAP family member 2 
SEPT9                 0.006   septin 9 isoform f 
SEPT9                 0.006   septin 9 isoform d 
SEPT9                 0.006   septin 9 isoform e 
SEPT9                 0.006   septin 9 isoform b 
SEPT9                 0.006   septin 9 isoform e 
SEPT9                 0.006   septin 9 isoform a 
SEPT9                 0.006   septin 9 isoform c 
GTPBP3                0.005   GTP binding protein 3 (mitochondrial) isoform III [...
GTPBP3                0.005   GTP binding protein 3 (mitochondrial) isoform V [Ho...
GNA11                 0.005   guanine nucleotide binding protein (G protein), alp...
GNA15                 0.005   guanine nucleotide binding protein (G protein), alp...
GIMAP8                0.005   GTPase, IMAP family member 8 
PCDHB7                0.005   protocadherin beta 7 precursor 
RALBP1                0.005   ralA binding protein 1 
ARHGAP4               0.005   Rho GTPase activating protein 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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