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Search of human proteins with 164663805
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|164663805 methyltransferase like 7B [Homo sapiens]
(244 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|164663805 methyltransferase like 7B [Homo sapiens] 514 e-146
gi|89145417 methyltransferase like 7A [Homo sapiens] 311 3e-85
gi|9506741 glycine N-methyltransferase [Homo sapiens] 39 0.004
gi|93141204 methyltransferase like 2B [Homo sapiens] 39 0.004
gi|161377433 methyltransferase like 8 [Homo sapiens] 38 0.007
gi|165932358 methyltransferase like 2A [Homo sapiens] 38 0.009
gi|12758125 ribosomal RNA processing 8, methyltransferase, homol... 34 0.10
gi|30425549 hypothetical protein LOC153571 [Homo sapiens] 33 0.17
gi|109389364 arsenic (+3 oxidation state) methyltransferase [Hom... 33 0.23
gi|116014336 methyltransferase like 9 isoform 1 [Homo sapiens] 33 0.30
gi|116014334 methyltransferase like 9 isoform 2 [Homo sapiens] 33 0.30
gi|223029410 talin 1 [Homo sapiens] 32 0.50
gi|89274169 cytokine induced apoptosis inhibitor 1 [Homo sapiens] 32 0.66
gi|118442825 methyltransferase like 6 [Homo sapiens] 31 0.86
gi|40018642 hypothetical protein LOC79133 isoform 1 [Homo sapiens] 31 1.1
gi|190684671 mitogen-activated protein kinase binding protein 1 ... 30 2.5
gi|190684677 mitogen-activated protein kinase binding protein 1 ... 30 2.5
gi|41872631 fatty acid synthase [Homo sapiens] 29 4.3
gi|13129000 meteorin, glial cell differentiation regulator [Homo... 29 4.3
gi|6912662 sirtuin 4 [Homo sapiens] 28 5.6
gi|197313748 SET domain containing 2 [Homo sapiens] 28 9.5
gi|4505757 progastricsin (pepsinogen C) [Homo sapiens] 28 9.5
gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens] 28 9.5
gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens] 28 9.5
gi|41350216 beta-1,4-mannosyltransferase [Homo sapiens] 28 9.5
>gi|164663805 methyltransferase like 7B [Homo sapiens]
Length = 244
Score = 514 bits (1323), Expect = e-146
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MDILVPLLQLLVLLLTLPLHLMALLGCWQPLCKSYFPYLMAVLTPKSNRKMESKKRELFS 60
MDILVPLLQLLVLLLTLPLHLMALLGCWQPLCKSYFPYLMAVLTPKSNRKMESKKRELFS
Sbjct: 1 MDILVPLLQLLVLLLTLPLHLMALLGCWQPLCKSYFPYLMAVLTPKSNRKMESKKRELFS 60
Query: 61 QIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFLTKSMAENRHLQYE 120
QIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFLTKSMAENRHLQYE
Sbjct: 61 QIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFLTKSMAENRHLQYE 120
Query: 121 RFVVAPGEDMRQLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVLFFWEHVAEPY 180
RFVVAPGEDMRQLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVLFFWEHVAEPY
Sbjct: 121 RFVVAPGEDMRQLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVLFFWEHVAEPY 180
Query: 181 GSWAFMWQQVFEPTWKHIGDGCCLTRETWKDLENAQFSEIQMERQPPPLKWLPVGPHIMG 240
GSWAFMWQQVFEPTWKHIGDGCCLTRETWKDLENAQFSEIQMERQPPPLKWLPVGPHIMG
Sbjct: 181 GSWAFMWQQVFEPTWKHIGDGCCLTRETWKDLENAQFSEIQMERQPPPLKWLPVGPHIMG 240
Query: 241 KAVK 244
KAVK
Sbjct: 241 KAVK 244
>gi|89145417 methyltransferase like 7A [Homo sapiens]
Length = 244
Score = 311 bits (797), Expect = 3e-85
Identities = 143/244 (58%), Positives = 185/244 (75%)
Query: 1 MDILVPLLQLLVLLLTLPLHLMALLGCWQPLCKSYFPYLMAVLTPKSNRKMESKKRELFS 60
M++ + +L+L + +LT PL+L+ LG W +CK +FPY + T N +M SKKRELFS
Sbjct: 1 MELTIFILRLAIYILTFPLYLLNFLGLWSWICKKWFPYFLVRFTVIYNEQMASKKRELFS 60
Query: 61 QIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFLTKSMAENRHLQYE 120
++ G SGK++LLE+GCGTGANF+FYPPGCRVTC+DPNP+FEKFL KS+AENRHLQ+E
Sbjct: 61 NLQEFAGPSGKLSLLEVGCGTGANFKFYPPGCRVTCIDPNPNFEKFLIKSIAENRHLQFE 120
Query: 121 RFVVAPGEDMRQLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVLFFWEHVAEPY 180
RFVVA GE+M Q+ADGS+DVVVCTLVLCSV++ ++L+EV RVLRPGG +F EHVA
Sbjct: 121 RFVVAAGENMHQVADGSVDVVVCTLVLCSVKNQERILREVCRVLRPGGAFYFMEHVAAEC 180
Query: 181 GSWAFMWQQVFEPTWKHIGDGCCLTRETWKDLENAQFSEIQMERQPPPLKWLPVGPHIMG 240
+W + WQQV +P W + DGC LTRE+WK LE A FS+++++ PL W V PHI G
Sbjct: 181 STWNYFWQQVLDPAWHLLFDGCNLTRESWKALERASFSKLKLQHIQAPLSWELVRPHIYG 240
Query: 241 KAVK 244
AVK
Sbjct: 241 YAVK 244
>gi|9506741 glycine N-methyltransferase [Homo sapiens]
Length = 295
Score = 38.9 bits (89), Expect = 0.004
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 16/134 (11%)
Query: 53 SKKRELFSQIKGLTGASGKVALLELGCGTGA-NFQFYPPGCRVTCLDPNPHFEKFLTKSM 111
S+ E + + GL G +L++ CGTG + G VT +D + K+ K
Sbjct: 40 SRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKER 99
Query: 112 AENRH-LQYERFVVAPG------EDMRQLADGSMDVVVCT------LVLC--SVQSPRKV 156
RH ++++V+ +D+ Q A+G D V+C L C R
Sbjct: 100 WNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLA 159
Query: 157 LQEVRRVLRPGGVL 170
L+ + ++R GG+L
Sbjct: 160 LKNIASMVRAGGLL 173
>gi|93141204 methyltransferase like 2B [Homo sapiens]
Length = 378
Score = 38.9 bits (89), Expect = 0.004
Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 18/183 (9%)
Query: 44 TPKSNRKMESKKRELFSQIKGLTGASGKVALLELGCGTGANFQF------YPPGCRVTCL 97
TP + K +L G+S +LE+GCG G N F PG V C
Sbjct: 154 TPPVEENVTQKISDLEICADEFPGSSATYRILEVGCGVG-NTVFPILQTNNDPGLFVYCC 212
Query: 98 DPNPHFEKFLTKSMAENRHLQYER---FV--VAPGEDMRQLADGSMDVVVCTLVLCSV-- 150
D F + + N R FV + E + GS+D+++ VL +V
Sbjct: 213 D----FSSTAIELVQTNSEYDPSRCFAFVHDLCDEEKSYPVPKGSLDIIILIFVLSAVVP 268
Query: 151 QSPRKVLQEVRRVLRPGGVLFFWEHVAEPYGSWAFMWQQVFEPTWKHIGDGCCLTRETWK 210
+K + + R+L+PGG++ ++ F Q + GDG + T +
Sbjct: 269 DKMQKAINRLSRLLKPGGMVLLRDYGRYDMAQLRFKKGQCLSGNFYVRGDGTRVYFFTQE 328
Query: 211 DLE 213
+L+
Sbjct: 329 ELD 331
>gi|161377433 methyltransferase like 8 [Homo sapiens]
Length = 407
Score = 38.1 bits (87), Expect = 0.007
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 51 MESKKRELFSQIKGL-TGASGKVALLELGCGTG------ANFQFYPPGCRVTCLDPNPHF 103
++S+K + GL G++ +LE+GCG G N P + C D
Sbjct: 176 LDSEKHKKGPMETGLFPGSNATFRILEVGCGAGNSVFPILNTLENSPESFLYCCDFASGA 235
Query: 104 EKFLTKSMAENRHLQYERFVVAPGED--MRQLADGSMDVVVCTLVLCSVQSPRK--VLQE 159
+ L KS + R Q FV +D DG +DV++ VL S+ R V+
Sbjct: 236 VE-LVKSHSSYRATQCFAFVHDVCDDGLPYPFPDGILDVILLVFVLSSIHPDRMQGVVNR 294
Query: 160 VRRVLRPGGVLFFWEH 175
+ ++L+PGG+L F ++
Sbjct: 295 LSKLLKPGGMLLFRDY 310
>gi|165932358 methyltransferase like 2A [Homo sapiens]
Length = 378
Score = 37.7 bits (86), Expect = 0.009
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 67 GASGKVALLELGCGTGANFQF------YPPGCRVTCLDPNPHFEKFLTKSMAENRHLQYE 120
G+S +LE+GCG G N F PG V C D F + + N
Sbjct: 177 GSSATYRILEVGCGVG-NTVFPILQTNNDPGLFVYCCD----FSSTAIELVQTNSEYDPS 231
Query: 121 R---FV--VAPGEDMRQLADGSMDVVVCTLVLCSV--QSPRKVLQEVRRVLRPGGVLFFW 173
R FV + E + GS+D+++ VL ++ +K + + R+L+PGG++
Sbjct: 232 RCFAFVHDLCDEEKSYPVPKGSLDIIILIFVLSAIVPDKMQKAINRLSRLLKPGGMMLLR 291
Query: 174 EHVAEPYGSWAFMWQQVFEPTWKHIGDGCCLTRETWKDLE 213
++ F Q + GDG + T ++L+
Sbjct: 292 DYGRYDMAQLRFKKGQCLSGNFYVRGDGTRVYFFTQEELD 331
>gi|12758125 ribosomal RNA processing 8, methyltransferase, homolog
[Homo sapiens]
Length = 456
Score = 34.3 bits (77), Expect = 0.10
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 18/110 (16%)
Query: 129 DMRQ--LADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVLFFWEHVAEPYGSWAFM 186
DM Q L D S+DV V L L R L+E RVL+PGG+L E V+ +
Sbjct: 346 DMAQVPLEDESVDVAVFCLSLMGTNI-RDFLEEANRVLKPGGLLKVAE-VSSRFEDVRTF 403
Query: 187 WQQVFEPTWKHIGDGCCLTRETWKDLENAQFSEIQMERQPPPLKWLPVGP 236
+ V + +K + KDL N+ F ++ PPL VGP
Sbjct: 404 LRAVTKLGFKIVS----------KDLTNSHFFLFDFQKTGPPL----VGP 439
>gi|30425549 hypothetical protein LOC153571 [Homo sapiens]
Length = 138
Score = 33.5 bits (75), Expect = 0.17
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 196 KHIGDGCCLTRETWKDLENAQFSEIQME-RQPPPLKW 231
KH GD C LT W+DL+ E E R PP++W
Sbjct: 72 KHWGDDCYLTNRLWQDLKPPSHVENGQELRLAPPVQW 108
>gi|109389364 arsenic (+3 oxidation state) methyltransferase [Homo
sapiens]
Length = 375
Score = 33.1 bits (74), Expect = 0.23
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 137 SMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVLFF 172
S D+VV V+ V ++VLQE RVL+ GG L+F
Sbjct: 148 SHDIVVSNCVINLVPDKQQVLQEAYRVLKHGGELYF 183
>gi|116014336 methyltransferase like 9 isoform 1 [Homo sapiens]
Length = 318
Score = 32.7 bits (73), Expect = 0.30
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 21/119 (17%)
Query: 74 LLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFLTKSMAENR--HLQYERFVVAPGEDMR 131
LL+LG G G VT + +PHFE+ ++E LQ +++ V G +
Sbjct: 149 LLDLGAGDG----------EVTKI-MSPHFEEIYATELSETMIWQLQKKKYRVL-GINEW 196
Query: 132 QLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRP-------GGVLFFWEHVAEPYGSW 183
Q DV+ C +L P +L+++R VL P VL F +V G W
Sbjct: 197 QNTGFQYDVISCLNLLDRCDQPLTLLKDIRSVLEPTRGRVILALVLPFHPYVENVGGKW 255
>gi|116014334 methyltransferase like 9 isoform 2 [Homo sapiens]
Length = 317
Score = 32.7 bits (73), Expect = 0.30
Identities = 34/123 (27%), Positives = 53/123 (43%), Gaps = 16/123 (13%)
Query: 74 LLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFLTKSMAENR--HLQYERFVVAPGEDMR 131
LL+LG G G VT + +PHFE+ ++E LQ +++ V G +
Sbjct: 149 LLDLGAGDG----------EVTKI-MSPHFEEIYATELSETMIWQLQKKKYRVL-GINEW 196
Query: 132 QLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRP--GGVLFFWEHVAEPYGSWAFMWQQ 189
Q DV+ C +L P +L+++R VL P G V+ PY W++
Sbjct: 197 QNTGFQYDVISCLNLLDRCDQPLTLLKDIRSVLEPTRGRVILALVLPFHPYVENGGKWEK 256
Query: 190 VFE 192
E
Sbjct: 257 PSE 259
>gi|223029410 talin 1 [Homo sapiens]
Length = 2541
Score = 32.0 bits (71), Expect = 0.50
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 50 KMESKKRELFSQIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPN 100
KM+ K E+ SQ+ +T +G +++ L G A + GC VT + N
Sbjct: 535 KMDESKHEIHSQVDAIT--AGTASVVNLTAGDPAETDYTAVGCAVTTISSN 583
>gi|89274169 cytokine induced apoptosis inhibitor 1 [Homo sapiens]
Length = 312
Score = 31.6 bits (70), Expect = 0.66
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 6/55 (10%)
Query: 128 EDMRQLA-----DGSMDVVVCTLVLCSVQ-SPRKVLQEVRRVLRPGGVLFFWEHV 176
E+++QL + S D+++ LV S ++L E+ R+LRPGG LF E V
Sbjct: 45 ENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 99
>gi|118442825 methyltransferase like 6 [Homo sapiens]
Length = 284
Score = 31.2 bits (69), Expect = 0.86
Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 22/119 (18%)
Query: 71 KVALLELGCGTGANFQFYPPGCRVTCLDPNPH-------FEKFLTKSMAENRHLQYERFV 123
K+ +LE GCG G C L+ +P+ F + + +N ER
Sbjct: 80 KLTMLEAGCGVG--------NCLFPLLEEDPNIFAYACDFSPRAIEYVKQNPLYDTERCK 131
Query: 124 V-----APGEDMRQLADGSMDVVVCTLVLCSVQSPRK--VLQEVRRVLRPGGVLFFWEH 175
V + + + S+DVV+ VL +V + VLQ + +VL+PG + F ++
Sbjct: 132 VFQCDLTKDDLLDHVPPESVDVVMLIFVLSAVHPDKMHLVLQNIYKVLKPGKSVLFRDY 190
>gi|40018642 hypothetical protein LOC79133 isoform 1 [Homo sapiens]
Length = 345
Score = 30.8 bits (68), Expect = 1.1
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 15/100 (15%)
Query: 75 LELGCGTGANFQFYPPGCRVTCLDPNPHFEKFLTKSMAENR-----HLQYERFVVAPGED 129
L+LGCG G Q+ KF +AEN + V E+
Sbjct: 94 LDLGCGRGYIAQYLN----------KETIGKFFQADIAENALKNSSETEIPTVSVLADEE 143
Query: 130 MRQLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGV 169
+ + D+VV +L L V + L+++ +L+P GV
Sbjct: 144 FLPFKENTFDLVVSSLSLHWVNDLPRALEQIHYILKPDGV 183
>gi|190684671 mitogen-activated protein kinase binding protein 1
isoform a [Homo sapiens]
Length = 1508
Score = 29.6 bits (65), Expect = 2.5
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 48 NRKMESKKRELFSQIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFL 107
NR+ + + ++ G+T + G+ L C + YP GC V +P H + +
Sbjct: 30 NRREDLSSKVTLEKVLGITVSGGR----GLACDPRSGLVAYPAGCVVVLFNPRKHKQHHI 85
Query: 108 TKS 110
S
Sbjct: 86 LNS 88
>gi|190684677 mitogen-activated protein kinase binding protein 1
isoform b [Homo sapiens]
Length = 1514
Score = 29.6 bits (65), Expect = 2.5
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 48 NRKMESKKRELFSQIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFL 107
NR+ + + ++ G+T + G+ L C + YP GC V +P H + +
Sbjct: 30 NRREDLSSKVTLEKVLGITVSGGR----GLACDPRSGLVAYPAGCVVVLFNPRKHKQHHI 85
Query: 108 TKS 110
S
Sbjct: 86 LNS 88
>gi|41872631 fatty acid synthase [Homo sapiens]
Length = 2511
Score = 28.9 bits (63), Expect = 4.3
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 20/112 (17%)
Query: 71 KVALLELGCGTGANFQFYPPGCRVTCLDPNPHFEKFLTKSMAENRHLQ--------YERF 122
K+ ++E+ G G + P L P+P + T A +RH Q ++
Sbjct: 1239 KMKVVEVLAGHGHLYSRIPG-----LLSPHPLLQLSYT---ATDRHPQALEAAQAELQQH 1290
Query: 123 VVAPGE----DMRQLADGSMDVVVCTLVLCSVQSPRKVLQEVRRVLRPGGVL 170
VA G+ D A GS D++VC + ++ P L + LR GG L
Sbjct: 1291 DVAQGQWDPADPAPSALGSADLLVCNCAVAALGDPASALSNMVAALREGGFL 1342
>gi|13129000 meteorin, glial cell differentiation regulator [Homo
sapiens]
Length = 293
Score = 28.9 bits (63), Expect = 4.3
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 64 GLTGASGKVALLELGCGTGANFQFYPPGC-RVTCLDPNP 101
GLT G V L L C GA YP G R+T P+P
Sbjct: 36 GLTQEPGSVGQLALACAEGAVEWLYPAGALRLTLGGPDP 74
>gi|6912662 sirtuin 4 [Homo sapiens]
Length = 314
Score = 28.5 bits (62), Expect = 5.6
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 136 GSMDVVVCTLVLCSVQSPRKVLQEVRRVLRP 166
G MD V+C + C Q+PR VLQE +VL P
Sbjct: 162 GCMDRVLC--LDCGEQTPRGVLQERFQVLNP 190
>gi|197313748 SET domain containing 2 [Homo sapiens]
Length = 2564
Score = 27.7 bits (60), Expect = 9.5
Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 15/111 (13%)
Query: 123 VVAPGEDMRQLADGSMDVVVCTLVLCSVQSPRK----VLQEVRRVLR-PGGVLFFWEHVA 177
+VAPG+ Q S VV L+ SP K VL + R P G ++++ HV
Sbjct: 2355 IVAPGQP--QPLQPSEMVVTNNLLDLPPPSPPKPKTIVLPPNWKTARDPEGKIYYY-HVI 2411
Query: 178 EPYGSWAFMWQQVFEPTWKHIGDGCCLTRETWKDLENAQFSEIQMERQPPP 228
W PTW+ GD L E DL + E M+ P
Sbjct: 2412 TRQTQWD-------PPTWESPGDDASLEHEAEMDLGTPTYDENPMKASKKP 2455
>gi|4505757 progastricsin (pepsinogen C) [Homo sapiens]
Length = 388
Score = 27.7 bits (60), Expect = 9.5
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 14/89 (15%)
Query: 140 VVVCTLVL--CSVQSPRKVLQEVRRVLRPGGVLFFWEHVAEPYGSWAFMWQQVFEPTWKH 197
V+VC +L V+ P K + +R ++ G+L F+ ++P WK+
Sbjct: 7 VLVCLQLLEAAVVKVPLKKFKSIRETMKEKGLL------------GEFLRTHKYDPAWKY 54
Query: 198 IGDGCCLTRETWKDLENAQFSEIQMERQP 226
+T E ++ A F EI + P
Sbjct: 55 RFGDLSVTYEPMAYMDAAYFGEISIGTPP 83
>gi|91992162 mutL homolog 3 isoform 1 [Homo sapiens]
Length = 1453
Score = 27.7 bits (60), Expect = 9.5
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 43 LTPKSNRKMESKKRELFSQIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPNPH 102
++ K NR M++ + LF K L V G FY R C+DP
Sbjct: 109 ISSKKNRTMKTFVK-LFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMDPRLE 167
Query: 103 FEK 105
FEK
Sbjct: 168 FEK 170
>gi|91992160 mutL homolog 3 isoform 2 [Homo sapiens]
Length = 1429
Score = 27.7 bits (60), Expect = 9.5
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 43 LTPKSNRKMESKKRELFSQIKGLTGASGKVALLELGCGTGANFQFYPPGCRVTCLDPNPH 102
++ K NR M++ + LF K L V G FY R C+DP
Sbjct: 109 ISSKKNRTMKTFVK-LFQSGKALKACEADVTRASAGTTVTVYNLFYQLPVRRKCMDPRLE 167
Query: 103 FEK 105
FEK
Sbjct: 168 FEK 170
>gi|41350216 beta-1,4-mannosyltransferase [Homo sapiens]
Length = 464
Score = 27.7 bits (60), Expect = 9.5
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 15 LTLPLHLMALLGCWQPLCKSYFPYLMAVLTPKSNRKMESKKRELFSQIKGL 65
L LP+ ++ + GC P+C F L ++ + N + EL +Q++ L
Sbjct: 373 LDLPMKVVDMFGCCLPVCAVNFKCLHELVKHEENGLVFEDSEELAAQLQML 423
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.140 0.460
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,134,475
Number of Sequences: 37866
Number of extensions: 511019
Number of successful extensions: 1300
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1283
Number of HSP's gapped (non-prelim): 28
length of query: 244
length of database: 18,247,518
effective HSP length: 99
effective length of query: 145
effective length of database: 14,498,784
effective search space: 2102323680
effective search space used: 2102323680
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.