Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GNMT Sequence: fasta or formatted (295aa) NCBI GI: 9506741
Description:

glycine N-methyltransferase

Referenced in:

Amino Acid Biosynthesis and Selected Derivatives

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         24           2
 C cysteine            2.7          8           1
 D aspartate           7.5         22           1
 E glutamate           4.1         12           2
 F phenylalanine       3.1          9           1
 G glycine             8.5         25           2
 H histidine           3.4         10           1
 I isoleucine          3.7         11           1
 K lysine              5.8         17           1
 L leucine             9.8         29           2
 M methionine          2.0          6           1
 N asparagine          2.7          8           2
 P proline             4.1         12           2
 Q glutamine           3.7         11           1
 R arginine            5.1         15           2
 S serine              6.4         19           1
 T threonine           5.1         15           2
 V valine              7.8         23           1
 W tryptophan          1.7          5           1
 Y tyrosine            4.7         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glycine N-methyltransferase 
METTL7B               0.024   methyltransferase like 7B 
WBSCR27               0.019   Williams-Beuren syndrome chromosome region 27 
COQ3                  0.019   hexaprenyldihydroxybenzoate methyltransferase [Homo...
WBSCR22               0.014   Williams Beuren syndrome chromosome region 22 protei...
PRMT6                 0.007   protein arginine methyltransferase 6 
SLC12A6               0.007   solute carrier family 12, member 6 isoform e 
SLC12A6               0.007   solute carrier family 12, member 6 isoform d 
SLC12A6               0.007   solute carrier family 12, member 6 isoform c 
SLC12A6               0.007   solute carrier family 12, member 6 isoform c 
SLC12A6               0.007   solute carrier family 12, member 6 isoform b 
SLC12A6               0.007   solute carrier family 12, member 6 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press