Guide to the Human Genome
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Name: UBE2S Sequence: fasta or formatted (222aa) NCBI GI: 112382377
Description:

ubiquitin-conjugating enzyme E2S

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.4         23           2
 C cysteine            0.9          2           1
 D aspartate           4.1          9           1
 E glutamate           8.6         19           2
 F phenylalanine       2.3          5           1
 G glycine            11.3         25           2
 H histidine           2.7          6           1
 I isoleucine          4.5         10           2
 K lysine              7.7         17           3
 L leucine            11.7         26           3
 M methionine          1.4          3           1
 N asparagine          4.5         10           1
 P proline             8.1         18           2
 Q glutamine           0.5          1           1
 R arginine            5.9         13           2
 S serine              3.2          7           2
 T threonine           5.9         13           2
 V valine              4.1          9           1
 W tryptophan          0.5          1           1
 Y tyrosine            2.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-conjugating enzyme E2S 
UBE2B                 0.199   ubiquitin-conjugating enzyme E2B 
UBE2D2                0.199   ubiquitin-conjugating enzyme E2D 2 isoform 1 
UBE2N                 0.199   ubiquitin-conjugating enzyme E2N 
UBE2D4                0.197   ubiquitin-conjugating enzyme E2D 4 (putative) 
UBE2D3                0.197   ubiquitin-conjugating enzyme E2D 3 isoform 2 
UBE2A                 0.194   ubiquitin-conjugating enzyme E2A isoform 1 
UBE2D3                0.192   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.192   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.192   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.192   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.192   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.192   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.192   ubiquitin-conjugating enzyme E2D 3 isoform 1 
UBE2D3                0.187   ubiquitin-conjugating enzyme E2D 3 isoform 3 
UBE2D1                0.187   ubiquitin-conjugating enzyme E2D 1 
UBE2K                 0.169   ubiquitin-conjugating enzyme E2K isoform 1 
UBE2D2                0.166   ubiquitin-conjugating enzyme E2D 2 isoform 2 
UBE2T                 0.162   ubiquitin-conjugating enzyme E2T 
UBE2E3                0.162   ubiquitin-conjugating enzyme E2E 3 
UBE2E3                0.162   ubiquitin-conjugating enzyme E2E 3 
UBE2NL                0.162   ubiquitin-conjugating enzyme E2N-like 
UBE2E2                0.159   ubiquitin-conjugating enzyme E2E 2 
UBE2E1                0.155   ubiquitin-conjugating enzyme E2E 1 isoform 1 
UBE2I                 0.152   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.152   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.152   ubiquitin-conjugating enzyme E2I 
UBE2I                 0.152   ubiquitin-conjugating enzyme E2I 
UBE2K                 0.148   ubiquitin-conjugating enzyme E2K isoform 2 
UBE2G2                0.138   ubiquitin-conjugating enzyme E2G 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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