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Search of human proteins with 15834621
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15834621 F-box only protein 4 isoform 2 [Homo sapiens]
(307 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15834621 F-box only protein 4 isoform 2 [Homo sapiens] 630 0.0
gi|15834619 F-box only protein 4 isoform 1 [Homo sapiens] 613 e-176
gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [H... 50 3e-06
gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [H... 50 3e-06
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H... 45 1e-04
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 45 1e-04
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H... 45 1e-04
gi|27312027 F-box only protein 16 [Homo sapiens] 38 0.010
gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens] 37 0.017
gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens] 37 0.017
gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens] 37 0.017
gi|118150678 epithelial cell transforming sequence 2 oncogene-li... 36 0.037
gi|30520327 F-box protein 27 [Homo sapiens] 36 0.037
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens] 35 0.11
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens] 34 0.14
gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens] 34 0.19
gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens] 33 0.32
gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens] 33 0.32
gi|16306588 F-box and leucine-rich repeat protein 4 [Homo sapiens] 32 0.92
gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens] 31 1.2
gi|51988914 fibroblast growth factor receptor-like 1 precursor [... 30 2.1
gi|51988910 fibroblast growth factor receptor-like 1 precursor [... 30 2.1
gi|51988912 fibroblast growth factor receptor-like 1 precursor [... 30 2.1
gi|48928044 F-box only protein 8 [Homo sapiens] 30 2.7
gi|54607118 leucine-rich repeats and immunoglobulin-like domains... 30 2.7
gi|229576894 F-box and WD repeat domain containing 12 isoform 2 ... 30 3.5
gi|229576873 F-box and WD repeat domain containing 12 isoform 1 ... 30 3.5
gi|24308129 F-box and WD repeat domain containing 5 [Homo sapiens] 30 3.5
gi|15812186 F-box only protein 3 isoform 1 [Homo sapiens] 30 3.5
gi|15812188 F-box only protein 3 isoform 2 [Homo sapiens] 30 3.5
>gi|15834621 F-box only protein 4 isoform 2 [Homo sapiens]
Length = 307
Score = 630 bits (1626), Expect = 0.0
Identities = 307/307 (100%), Positives = 307/307 (100%)
Query: 1 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT 60
MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT
Sbjct: 1 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT 60
Query: 61 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD 120
RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD
Sbjct: 61 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD 120
Query: 121 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA 180
LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA
Sbjct: 121 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA 180
Query: 181 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT 240
MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT
Sbjct: 181 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT 240
Query: 241 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKS 300
RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKS
Sbjct: 241 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHKS 300
Query: 301 KYSYVHF 307
KYSYVHF
Sbjct: 301 KYSYVHF 307
>gi|15834619 F-box only protein 4 isoform 1 [Homo sapiens]
Length = 387
Score = 613 bits (1581), Expect = e-176
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT 60
MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT
Sbjct: 1 MAGSEPRSGTNSPPPPFSDWGRLEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT 60
Query: 61 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD 120
RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD
Sbjct: 61 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD 120
Query: 121 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA 180
LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA
Sbjct: 121 LEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQNEPRFA 180
Query: 181 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT 240
MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT
Sbjct: 181 MFGPGLEELNTSLVLSLMSSEELCPTAGLPQRQIDGIGSGVNFQLNNQHKFNILILYSTT 240
Query: 241 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHK 299
RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHK
Sbjct: 241 RKERDRAREEHTSAVNKMFSRHNEGDDQQGSRYSVIPQIQKVCEVVDGFIYVANAEAHK 299
>gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [Homo
sapiens]
Length = 565
Score = 50.1 bits (118), Expect = 3e-06
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 45 RTTSREEVDEAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLL 104
++ EV E ++ +T LP +V L I S+L+P +LC+ + W++ + LW++
Sbjct: 65 KSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLY- 123
Query: 105 RDLPSWSSVDWKSLPDLEILKKPISE 130
W+ DW S P E+ +P E
Sbjct: 124 --PVHWARGDWYSGPATELDTEPDDE 147
>gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [Homo
sapiens]
Length = 691
Score = 50.1 bits (118), Expect = 3e-06
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 45 RTTSREEVDEAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLL 104
++ EV E ++ +T LP +V L I S+L+P +LC+ + W++ + LW++
Sbjct: 191 KSDKEAEVSEHSTGITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLY- 249
Query: 105 RDLPSWSSVDWKSLPDLEILKKPISE 130
W+ DW S P E+ +P E
Sbjct: 250 --PVHWARGDWYSGPATELDTEPDDE 273
>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
sapiens]
Length = 589
Score = 44.7 bits (104), Expect = 1e-04
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 59 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR 100
++ LP ++ LY+LSFL P DL Q T YW D +LWR
Sbjct: 163 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWR 204
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 44.7 bits (104), Expect = 1e-04
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 59 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR 100
++ LP ++ LY+LSFL P DL Q T YW D +LWR
Sbjct: 281 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWR 322
>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
sapiens]
Length = 627
Score = 44.7 bits (104), Expect = 1e-04
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 59 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR 100
++ LP ++ LY+LSFL P DL Q T YW D +LWR
Sbjct: 201 ISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWR 242
>gi|27312027 F-box only protein 16 [Homo sapiens]
Length = 292
Score = 38.1 bits (87), Expect = 0.010
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 37 SVSKERVARTTSREEVD-EAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRD 95
S+S+++ +E++ EA T+LP + LYI SFL P LC+ +W
Sbjct: 66 SLSQQKFCCRKLQEKIPAEALDFTTKLPRVLSLYIFSFLDPRSLCRCAQVCWHWKNLAEL 125
Query: 96 PILWRYFLLR 105
LW LR
Sbjct: 126 DQLWMLKCLR 135
>gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]
Length = 843
Score = 37.4 bits (85), Expect = 0.017
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 23 LEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT-RLPIDVQLYILSFLSPHDLCQ 81
+E A S + F + RV+ + A L +LP +V L I S+L DLC+
Sbjct: 35 MEGASTSTTENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQDLCR 94
Query: 82 LGSTNHYWNETVRDPILWR 100
++E DPILW+
Sbjct: 95 AACVCKRFSELANDPILWK 113
>gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]
Length = 686
Score = 37.4 bits (85), Expect = 0.017
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 23 LEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT-RLPIDVQLYILSFLSPHDLCQ 81
+E A S + F + RV+ + A L +LP +V L I S+L DLC+
Sbjct: 35 MEGASTSTTENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQDLCR 94
Query: 82 LGSTNHYWNETVRDPILWR 100
++E DPILW+
Sbjct: 95 AACVCKRFSELANDPILWK 113
>gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]
Length = 585
Score = 37.4 bits (85), Expect = 0.017
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 23 LEAAILSGWKTFWQSVSKERVARTTSREEVDEAASTLT-RLPIDVQLYILSFLSPHDLCQ 81
+E A S + F + RV+ + A L +LP +V L I S+L DLC+
Sbjct: 35 MEGASTSTTENFGHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQDLCR 94
Query: 82 LGSTNHYWNETVRDPILWR 100
++E DPILW+
Sbjct: 95 AACVCKRFSELANDPILWK 113
>gi|118150678 epithelial cell transforming sequence 2 oncogene-like
[Homo sapiens]
Length = 904
Score = 36.2 bits (82), Expect = 0.037
Identities = 17/40 (42%), Positives = 19/40 (47%)
Query: 60 TRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILW 99
T LP + LYI SFLSP DLC + W LW
Sbjct: 79 TVLPRFISLYIFSFLSPKDLCAAAQVSWPWKFLTEQDCLW 118
>gi|30520327 F-box protein 27 [Homo sapiens]
Length = 283
Score = 36.2 bits (82), Expect = 0.037
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 37 SVSKERVARTTSREEVDEAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHY---WNETV 93
SVS+ R AR + E E A L++LP ++ L +LS + P L LG W V
Sbjct: 4 SVSRGRAARVPAPEPEPEEALDLSQLPPELLLVVLSHVPPRTL--LGRCRQVCRGWRALV 61
Query: 94 RDPILWRYFLLRD 106
LW L RD
Sbjct: 62 DGQALWLLILARD 74
>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
Length = 491
Score = 34.7 bits (78), Expect = 0.11
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 45 RTTSREEVDEAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR 100
R SR + ++A+ + RLP + I SFL + LC+ W DP LWR
Sbjct: 102 RLASRPQKEQAS--IDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWR 155
>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens]
Length = 326
Score = 34.3 bits (77), Expect = 0.14
Identities = 17/45 (37%), Positives = 22/45 (48%)
Query: 57 STLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRY 101
+TL LP V L I S+L D ++ H W V D LWR+
Sbjct: 2 ATLVELPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRH 46
>gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens]
Length = 318
Score = 33.9 bits (76), Expect = 0.19
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
Query: 63 PIDVQLY-------ILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDW 115
PI +QL+ I+SFL DL LG T Y++E +WR R P D
Sbjct: 36 PISIQLFPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRICRRLSPRLQDQDT 95
Query: 116 KSL 118
K L
Sbjct: 96 KGL 98
>gi|74229029 F-box only protein 7 isoform 2 [Homo sapiens]
Length = 443
Score = 33.1 bits (74), Expect = 0.32
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 59 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPS----WSSVD 114
L LP++++L I L + L + DP+LWR+ LRD D
Sbjct: 253 LVVLPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVRVQDTD 312
Query: 115 WKSL 118
WK L
Sbjct: 313 WKEL 316
>gi|74229027 F-box only protein 7 isoform 1 [Homo sapiens]
Length = 522
Score = 33.1 bits (74), Expect = 0.32
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 59 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPS----WSSVD 114
L LP++++L I L + L + DP+LWR+ LRD D
Sbjct: 332 LVVLPLELKLRIFRLLDVRSVLSLSAVCRDLFTASNDPLLWRFLYLRDFRDNTVRVQDTD 391
Query: 115 WKSL 118
WK L
Sbjct: 392 WKEL 395
>gi|16306588 F-box and leucine-rich repeat protein 4 [Homo sapiens]
Length = 621
Score = 31.6 bits (70), Expect = 0.92
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 61 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVDWKSLPD 120
+LP ++ IL+ L+ DLC+L T ++ DP+ +Y L P W+ +D SL
Sbjct: 282 KLPYELIQLILNHLTLPDLCRLAQTCKLLSQHCCDPL--QYIHLNLQPYWAKLDDTSLEF 339
Query: 121 LE 122
L+
Sbjct: 340 LQ 341
>gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]
Length = 580
Score = 31.2 bits (69), Expect = 1.2
Identities = 31/110 (28%), Positives = 40/110 (36%), Gaps = 26/110 (23%)
Query: 63 PIDVQLY-------ILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSV-- 113
PI +QL+ I+SFL DL LG T Y++E +WR R P
Sbjct: 36 PISIQLFPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRICRRLSPRLQDQGS 95
Query: 114 ---DWKSLPDLEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPM 160
WK + I T G +F R C SKS P+
Sbjct: 96 GVRPWK--------RAAILNYTKGLYFQAFGGRRRC------LSKSVAPL 131
>gi|51988914 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 30.4 bits (67), Expect = 2.1
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 14 PPPFSDWGRLEAAILSGWKTFW---QSVSKERVARTTSREEVDEAASTLTRLPIDVQLYI 70
PPP + W + I SGW F Q + ++V R + V +A + L ++ L +
Sbjct: 57 PPPLTMWTKDGRTIHSGWSRFRVLPQGLKVKQVEREDAGVYVCKATNGFGSLSVNYTLVV 116
Query: 71 LSFLSP 76
L +SP
Sbjct: 117 LDDISP 122
>gi|51988910 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 30.4 bits (67), Expect = 2.1
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 14 PPPFSDWGRLEAAILSGWKTFW---QSVSKERVARTTSREEVDEAASTLTRLPIDVQLYI 70
PPP + W + I SGW F Q + ++V R + V +A + L ++ L +
Sbjct: 57 PPPLTMWTKDGRTIHSGWSRFRVLPQGLKVKQVEREDAGVYVCKATNGFGSLSVNYTLVV 116
Query: 71 LSFLSP 76
L +SP
Sbjct: 117 LDDISP 122
>gi|51988912 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 30.4 bits (67), Expect = 2.1
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 14 PPPFSDWGRLEAAILSGWKTFW---QSVSKERVARTTSREEVDEAASTLTRLPIDVQLYI 70
PPP + W + I SGW F Q + ++V R + V +A + L ++ L +
Sbjct: 57 PPPLTMWTKDGRTIHSGWSRFRVLPQGLKVKQVEREDAGVYVCKATNGFGSLSVNYTLVV 116
Query: 71 LSFLSP 76
L +SP
Sbjct: 117 LDDISP 122
>gi|48928044 F-box only protein 8 [Homo sapiens]
Length = 319
Score = 30.0 bits (66), Expect = 2.7
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 49 REEVDEAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR 100
+ + E L LP ++ ILS+L+ DLC W + D +LW+
Sbjct: 61 KSKEQEGFINLEMLPPELSFTILSYLNATDLCLASCV---WQDLANDELLWQ 109
>gi|54607118 leucine-rich repeats and immunoglobulin-like domains 1
[Homo sapiens]
Length = 1093
Score = 30.0 bits (66), Expect = 2.7
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 117 SLPDLEILKKPISEVTDGAFFDYMAVYRMCCPYTRRASKSSRPMYGAVTSFLHSLIIQN 175
SL L++ + IS++TDGAF+ ++ + Y +S +YG LH L + N
Sbjct: 236 SLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTA--LHQLHLSN 292
>gi|229576894 F-box and WD repeat domain containing 12 isoform 2
[Homo sapiens]
Length = 394
Score = 29.6 bits (65), Expect = 3.5
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 61 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLR 105
RLP I SFL L Q+ N +WN LWR L+
Sbjct: 4 RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQ 48
>gi|229576873 F-box and WD repeat domain containing 12 isoform 1
[Homo sapiens]
Length = 464
Score = 29.6 bits (65), Expect = 3.5
Identities = 16/45 (35%), Positives = 19/45 (42%)
Query: 61 RLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLR 105
RLP I SFL L Q+ N +WN LWR L+
Sbjct: 4 RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQ 48
>gi|24308129 F-box and WD repeat domain containing 5 [Homo sapiens]
Length = 566
Score = 29.6 bits (65), Expect = 3.5
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 8/63 (12%)
Query: 52 VDEAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR------YFLLR 105
+DE + L LP + I L P D+ G W RD LWR Y + R
Sbjct: 1 MDEGGTPL--LPDSLVYQIFLSLGPADVLAAGLVCRQWQAVSRDEFLWREQFYRYYQVAR 58
Query: 106 DLP 108
D+P
Sbjct: 59 DVP 61
>gi|15812186 F-box only protein 3 isoform 1 [Homo sapiens]
Length = 471
Score = 29.6 bits (65), Expect = 3.5
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 51 EVDEAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR-----YFLL- 104
E + A TL LP D L ILSFL DL + ++ LWR Y+L+
Sbjct: 5 ETETAPLTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKYWLIS 64
Query: 105 RDLPSWSSVDWKSL 118
+ + + WKSL
Sbjct: 65 EEEKTQKNQCWKSL 78
>gi|15812188 F-box only protein 3 isoform 2 [Homo sapiens]
Length = 415
Score = 29.6 bits (65), Expect = 3.5
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 51 EVDEAASTLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR-----YFLL- 104
E + A TL LP D L ILSFL DL + ++ LWR Y+L+
Sbjct: 5 ETETAPLTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKYWLIS 64
Query: 105 RDLPSWSSVDWKSL 118
+ + + WKSL
Sbjct: 65 EEEKTQKNQCWKSL 78
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,270,565
Number of Sequences: 37866
Number of extensions: 518909
Number of successful extensions: 1322
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1299
Number of HSP's gapped (non-prelim): 33
length of query: 307
length of database: 18,247,518
effective HSP length: 102
effective length of query: 205
effective length of database: 14,385,186
effective search space: 2948963130
effective search space used: 2948963130
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.