Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SLC5A10 Sequence: fasta or formatted (596aa) NCBI GI: 109659836
Description:

solute carrier family 5 (sodium/glucose cotransporter), member 10 isoform 2

Referenced in:

Solute Carrier Families

Other entries for this name:
alt prot [612aa] solute carrier family 5 (sodium/glucose cotransporter), member 10...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         66           2
 C cysteine            1.8         11           1
 D aspartate           3.0         18           2
 E glutamate           2.3         14           1
 F phenylalanine       4.5         27           2
 G glycine             8.7         52           2
 H histidine           1.5          9           1
 I isoleucine          7.2         43           2
 K lysine              1.3          8           1
 L leucine            12.6         75           3
 M methionine          3.4         20           1
 N asparagine          2.7         16           1
 P proline             4.7         28           3
 Q glutamine           3.0         18           1
 R arginine            4.2         25           2
 S serine              7.2         43           3
 T threonine           6.4         38           2
 V valine              8.2         49           3
 W tryptophan          2.7         16           2
 Y tyrosine            3.4         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 5 (sodium/glucose cotransport... 
SLC5A10               0.991   solute carrier family 5 (sodium/glucose cotransport...
SLC5A9                0.612   solute carrier family 5 (sodium/glucose cotransport...
SLC5A9                0.601   solute carrier family 5 (sodium/glucose cotransport...
SLC5A1                0.549   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A2                0.538   solute carrier family 5 (sodium/glucose cotransporter...
SLC5A11               0.527   solute carrier family 5 (sodium/glucose cotransporte...
SLC5A4                0.493   solute carrier family 5 (low affinity glucose cotran...
SLC5A3                0.489   solute carrier family 5 (inositol transporters), me...
SLC5A6                0.095   solute carrier family 5 (sodium-dependent vitamin tr...
SLC5A12               0.083   solute carrier family 5 (sodium/glucose cotransport...
SLC5A5                0.070   solute carrier family 5 (sodium iodide symporter), me...
SLC5A8                0.068   solute carrier family 5 (iodide transporter), membe...
SLC5A7                0.050   solute carrier family 5 (choline transporter), membe...
DAGLB                 0.010   diacylglycerol lipase, beta isoform 2 
LOC100293101          0.006   PREDICTED: similar to Uncharacterized protein LP905...
LOC100290734          0.006   PREDICTED: hypothetical protein XP_002346661 
LOC100288413          0.006   PREDICTED: hypothetical protein XP_002342492 
SLC2A11               0.005   glucose transporter protein 10 isoform a 
SLC2A11               0.005   glucose transporter protein 10 isoform c 
SLC2A11               0.005   glucose transporter protein 10 isoform b 
SLC6A12               0.005   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.005   solute carrier family 6 (neurotransmitter transport...
SLC6A12               0.005   solute carrier family 6 (neurotransmitter transport...
MFSD9                 0.004   major facilitator superfamily domain containing 9 [...
GPR172B               0.004   G protein-coupled receptor 172B 
GPR172B               0.004   G protein-coupled receptor 172B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press