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Search of human proteins with 156564398
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|156564398 target of EGR1, member 1 (nuclear) [Homo sapiens]
(510 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|156564398 target of EGR1, member 1 (nuclear) [Homo sapiens] 1048 0.0
gi|4505611 poly(A)-specific ribonuclease (deadenylation nuclease... 57 5e-08
gi|27735155 poly(A)-specific ribonuclease (PARN)-like domain con... 46 7e-05
gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo ... 42 0.001
gi|169162915 PREDICTED: hypothetical protein LOC728841 [Homo sap... 42 0.001
gi|12758125 ribosomal RNA processing 8, methyltransferase, homol... 39 0.011
gi|157266285 hypothetical protein LOC728936 [Homo sapiens] 38 0.019
gi|92110019 hypothetical protein LOC55672 [Homo sapiens] 38 0.025
gi|29789405 hypothetical protein LOC284565 [Homo sapiens] 37 0.033
gi|85067507 CCR4-NOT transcription complex, subunit 7 isoform 1 ... 37 0.043
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 37 0.056
gi|197333695 poly(A)-specific ribonuclease (deadenylation nuclea... 36 0.095
gi|85067505 CCR4-NOT transcription complex, subunit 7 isoform 2 ... 36 0.095
gi|122937492 SET domain containing 5 [Homo sapiens] 35 0.16
gi|11545835 TSPY-like 2 [Homo sapiens] 34 0.28
gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens] 34 0.36
gi|7661948 malectin [Homo sapiens] 33 0.62
gi|15812180 butyrate response factor 1 [Homo sapiens] 32 1.1
gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo s... 32 1.4
gi|187828880 calcium channel, alpha 1A subunit isoform 3 [Homo s... 32 1.4
gi|239753856 PREDICTED: hypothetical protein [Homo sapiens] 32 1.4
gi|239748415 PREDICTED: hypothetical protein [Homo sapiens] 32 1.4
gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo ... 32 1.4
gi|109633041 protein tyrosine phosphatase, receptor type, F isof... 32 1.8
gi|109633039 protein tyrosine phosphatase, receptor type, F isof... 32 1.8
gi|110431350 endo-beta-N-acetylglucosaminidase [Homo sapiens] 32 1.8
gi|157785645 SPEG complex locus [Homo sapiens] 32 1.8
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 32 1.8
gi|13375901 PRKR interacting protein 1 (IL11 inducible) [Homo sa... 32 1.8
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens] 31 2.3
>gi|156564398 target of EGR1, member 1 (nuclear) [Homo sapiens]
Length = 510
Score = 1048 bits (2709), Expect = 0.0
Identities = 510/510 (100%), Positives = 510/510 (100%)
Query: 1 MAADSDDGAVSAPAASDGGVSKSTTSGEELVVQVPVVDVQSNNFKEMWPSLLLAIKTANF 60
MAADSDDGAVSAPAASDGGVSKSTTSGEELVVQVPVVDVQSNNFKEMWPSLLLAIKTANF
Sbjct: 1 MAADSDDGAVSAPAASDGGVSKSTTSGEELVVQVPVVDVQSNNFKEMWPSLLLAIKTANF 60
Query: 61 VAVDTELSGLGDRKSLLNQCIEERYKAVCHAARTRSILSLGLACFKRQPDKGEHSYLAQV 120
VAVDTELSGLGDRKSLLNQCIEERYKAVCHAARTRSILSLGLACFKRQPDKGEHSYLAQV
Sbjct: 61 VAVDTELSGLGDRKSLLNQCIEERYKAVCHAARTRSILSLGLACFKRQPDKGEHSYLAQV 120
Query: 121 FNLTLLCMEEYVIEPKSVQFLIQHGFNFNQQYAQGIPYHKGNDKGDESQSQSVRTLFLEL 180
FNLTLLCMEEYVIEPKSVQFLIQHGFNFNQQYAQGIPYHKGNDKGDESQSQSVRTLFLEL
Sbjct: 121 FNLTLLCMEEYVIEPKSVQFLIQHGFNFNQQYAQGIPYHKGNDKGDESQSQSVRTLFLEL 180
Query: 181 IRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLCEMFPAGIYDTKYAAEFHARFV 240
IRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLCEMFPAGIYDTKYAAEFHARFV
Sbjct: 181 IRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLCEMFPAGIYDTKYAAEFHARFV 240
Query: 241 ASYLEYAFRKCERENGKQRAAGSPHLTLEFCNYPSSMRDHIDYRCCLPPATHRPHPTSIC 300
ASYLEYAFRKCERENGKQRAAGSPHLTLEFCNYPSSMRDHIDYRCCLPPATHRPHPTSIC
Sbjct: 241 ASYLEYAFRKCERENGKQRAAGSPHLTLEFCNYPSSMRDHIDYRCCLPPATHRPHPTSIC 300
Query: 301 DNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRRRRRRREKRKRALLNLPGTQTSGE 360
DNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRRRRRRREKRKRALLNLPGTQTSGE
Sbjct: 301 DNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRRRRRRREKRKRALLNLPGTQTSGE 360
Query: 361 AKDGPPKKQVCGDSIKPEETEQEVAADETRNLPHSKQGNKNDLEMGIKAARPEIADRATS 420
AKDGPPKKQVCGDSIKPEETEQEVAADETRNLPHSKQGNKNDLEMGIKAARPEIADRATS
Sbjct: 361 AKDGPPKKQVCGDSIKPEETEQEVAADETRNLPHSKQGNKNDLEMGIKAARPEIADRATS 420
Query: 421 EVPGSQASPNPVPGDGLHRAGFDAFMTGYVMAYVEVSQGPQPCSSGPWLPECHNKVYLSG 480
EVPGSQASPNPVPGDGLHRAGFDAFMTGYVMAYVEVSQGPQPCSSGPWLPECHNKVYLSG
Sbjct: 421 EVPGSQASPNPVPGDGLHRAGFDAFMTGYVMAYVEVSQGPQPCSSGPWLPECHNKVYLSG 480
Query: 481 KAVPLTVAKSQFSRSSKAHNQKMKLTWGSS 510
KAVPLTVAKSQFSRSSKAHNQKMKLTWGSS
Sbjct: 481 KAVPLTVAKSQFSRSSKAHNQKMKLTWGSS 510
>gi|4505611 poly(A)-specific ribonuclease (deadenylation nuclease)
isoform 1 [Homo sapiens]
Length = 639
Score = 56.6 bits (135), Expect = 5e-08
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 21/155 (13%)
Query: 37 VDVQSNNFKEMWPSLLLAIKTANFVAVDTELSGLGDRKS---LLN--QCIEERYKAVCHA 91
+++ +NFK + AI+ A+F A+D E SG+ D S L N EERY+ +
Sbjct: 1 MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKH 60
Query: 92 ARTRSILSLGLACFKRQPDKGEHSYLAQVFNLTLLCME--------EYVIEPKSVQFLIQ 143
+ + GL FK D + Y+ + FN + ++V + S+ FL
Sbjct: 61 SMDFLLFQFGLCTFKY--DYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLAS 118
Query: 144 HGFNFNQQYAQGIPY------HKGNDKGDESQSQS 172
GF+FN+ + GIPY + ++ DE +SQ+
Sbjct: 119 QGFDFNKVFRNGIPYLNQEEERQLREQYDEKRSQA 153
>gi|27735155 poly(A)-specific ribonuclease (PARN)-like domain
containing 1 [Homo sapiens]
Length = 520
Score = 46.2 bits (108), Expect = 7e-05
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 177 FLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLCEMFPAGIYDTK 230
F L++A++PLV HN ++DL+ L++ F+ LPES F ++ +FP + DTK
Sbjct: 242 FQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHSLFPV-LIDTK 294
Score = 40.4 bits (93), Expect = 0.004
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 18/128 (14%)
Query: 58 ANFVAVDTELSGL-----GDRKSLLNQCIEERYKAVCHAARTRSILSLGLACFKRQPDKG 112
A +D E +GL G ++ L E Y + + ++ +GL+ F +
Sbjct: 11 AFLAGLDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQSVQQFTVCQIGLSVFSAIEGEA 70
Query: 113 EHSYLAQVFNLTL------LCMEEYVIEPKSVQFLIQHGFNFNQQYAQGIPYHKGNDKGD 166
+ Y+A N L + E+ + SVQFL Q+GFN+N+ GIPY +
Sbjct: 71 -NKYIAHSCNFYLFPTTFGILDSEFSFQASSVQFLNQYGFNYNKFLKNGIPYM------N 123
Query: 167 ESQSQSVR 174
E Q + +R
Sbjct: 124 EEQEKKIR 131
>gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo
sapiens]
Length = 4621
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 31/230 (13%)
Query: 160 KGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLC 219
+G +G+E Q+ L EL+ + P VL + L D + + Y LP DL
Sbjct: 2799 RGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLG 2849
Query: 220 EMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSM 277
+ + + +Y +++ L+ K ++E + + P L+ E P +
Sbjct: 2850 QPYSSAVY------SLEEQYLGLALDVDRTKKDQEEEEDQGPPCPRLSRELLEVVEPEVL 2903
Query: 278 RDHIDYRCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRR 337
+D +D RC P++ P S C + + + S D+ I E + K+R
Sbjct: 2904 QDSLD-RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI----EKKGKGKKR 2957
Query: 338 RRRRREKRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETEQEVAAD 387
R RR +K +R + GE PP ++ + + +E E EV D
Sbjct: 2958 RGRRSKKERRR------GRKEGEEDQNPPCPRLSRELL--DEKEPEVLQD 2999
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 31/230 (13%)
Query: 160 KGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLC 219
+G +G+E Q+ L EL+ + P VL + L D + + Y LP DL
Sbjct: 2968 RGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLG 3018
Query: 220 EMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSM 277
+ + + +Y +++ L+ K ++E + + P L+ E P +
Sbjct: 3019 QPYSSAVY------SLEEQYLGLALDVDRTKKDQEEEEDQGPPCPRLSRELLEVVEPEVL 3072
Query: 278 RDHIDYRCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRR 337
+D +D RC P++ P S C + + + S D+ I E + K+R
Sbjct: 3073 QDSLD-RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI----EKKGKGKKR 3126
Query: 338 RRRRREKRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETEQEVAAD 387
R RR +K +R + GE PP ++ + + +E E EV D
Sbjct: 3127 RGRRSKKERRR------GRKEGEEDQNPPCPRLSRELL--DEKEPEVLQD 3168
Score = 40.8 bits (94), Expect = 0.003
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 29/218 (13%)
Query: 166 DESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLCEMFPAG 225
+E Q S L EL+ + P VL + L D + + Y LP DL + + +
Sbjct: 4363 EEDQDPSCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLGQPYSSA 4413
Query: 226 IYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSMRDHIDY 283
+Y + +++ L+ K ++E + + P L+ E P ++D +D
Sbjct: 4414 VYSLE------EQYLGLALDVDRTKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLD- 4466
Query: 284 RCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRRRRRRRE 343
RC P++ P S C + + + S D+ I ++ KRR RR ++
Sbjct: 4467 RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI---EKKGKGKKRRGRRSKK 4522
Query: 344 KRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETE 381
KR+R + GE PP ++ G ++ EE E
Sbjct: 4523 KRRRG-------RKEGEEDQNPPCPRLNGVLMEVEEPE 4553
Score = 39.7 bits (91), Expect = 0.007
Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 29/209 (13%)
Query: 160 KGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLC 219
+G +G+E Q+ L EL+ + P VL + L D + + Y LP DL
Sbjct: 3137 RGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLG 3187
Query: 220 EMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSM 277
+ + + +Y +++ L+ K ++E + + P L+ E P +
Sbjct: 3188 QPYSSAVY------SLEEQYLGLALDVDRTKKDQEEEEDQGPPCPRLSRELLEVVEPEVL 3241
Query: 278 RDHIDYRCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRR 337
+D +D RC P++ P S C + + + S D+ I E + K+R
Sbjct: 3242 QDSLD-RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI----EKKGKGKKR 3295
Query: 338 RRRRREKRKRALLNLPGTQTSGEAKDGPP 366
R RR +K +R + GE PP
Sbjct: 3296 RGRRSKKERRR------GRKEGEEDQNPP 3318
>gi|169162915 PREDICTED: hypothetical protein LOC728841 [Homo sapiens]
Length = 3815
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 31/230 (13%)
Query: 160 KGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLC 219
+G +G+E Q+ L EL+ + P VL + L D + + Y LP DL
Sbjct: 1084 RGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLG 1134
Query: 220 EMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSM 277
+ + + +Y +++ L+ K ++E + + P L+ E P +
Sbjct: 1135 QPYSSAVY------SLEEQYLGLALDVDRTKKDQEEEEDQGPPCPRLSRELLEVVEPEVL 1188
Query: 278 RDHIDYRCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRR 337
+D +D RC P++ P S C + + + S D+ I E + K+R
Sbjct: 1189 QDSLD-RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI----EKKGKGKKR 1242
Query: 338 RRRRREKRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETEQEVAAD 387
R RR +K +R + GE PP ++ + + +E E EV D
Sbjct: 1243 RGRRSKKERRR------GRKEGEEDQNPPCPRLSRELL--DEKEPEVLQD 1284
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 31/230 (13%)
Query: 160 KGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLC 219
+G +G+E Q+ L EL+ + P VL + L D + + Y LP DL
Sbjct: 1253 RGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLG 1303
Query: 220 EMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSM 277
+ + + +Y +++ L+ K ++E + + P L+ E P +
Sbjct: 1304 QPYSSAVY------SLEEQYLGLALDVDRTKKDQEEEEDQGPPCPRLSRELLEVVEPEVL 1357
Query: 278 RDHIDYRCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRR 337
+D +D RC P++ P S C + + + S D+ I E + K+R
Sbjct: 1358 QDSLD-RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI----EKKGKGKKR 1411
Query: 338 RRRRREKRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETEQEVAAD 387
R RR +K +R + GE PP ++ + + +E E EV D
Sbjct: 1412 RGRRSKKERRR------GRKEGEEDQNPPCPRLSRELL--DEKEPEVLQD 1453
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 31/230 (13%)
Query: 160 KGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLC 219
+G +G+E Q+ L EL+ + P VL + L D + + Y LP DL
Sbjct: 2980 RGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLG 3030
Query: 220 EMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSM 277
+ + + +Y +++ L+ K ++E + + P L+ E P +
Sbjct: 3031 QPYSSAVY------SLEEQYLGLALDVDRTKKDQEEEEDQGPPCPRLSRELLEVVEPEVL 3084
Query: 278 RDHIDYRCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRR 337
+D +D RC P++ P S C + + + S D+ I E + K+R
Sbjct: 3085 QDSLD-RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI----EKKGKGKKR 3138
Query: 338 RRRRREKRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETEQEVAAD 387
R RR +K +R + GE PP ++ + + +E E EV D
Sbjct: 3139 RGRRSKKERRR------GRKEGEEDQNPPCPRLSRELL--DEKEPEVLQD 3180
Score = 42.4 bits (98), Expect = 0.001
Identities = 53/230 (23%), Positives = 94/230 (40%), Gaps = 31/230 (13%)
Query: 160 KGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLC 219
+G +G+E Q+ L EL+ + P VL + L D + + Y LP DL
Sbjct: 3149 RGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLG 3199
Query: 220 EMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSM 277
+ + + +Y +++ L+ K ++E + + P L+ E P +
Sbjct: 3200 QPYSSAVY------SLEEQYLGLALDVDRTKKDQEEEEDQGPPCPRLSRELLEVVEPEVL 3253
Query: 278 RDHIDYRCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRR 337
+D +D RC P++ P S C + + + S D+ I E + K+R
Sbjct: 3254 QDSLD-RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI----EKKGKGKKR 3307
Query: 338 RRRRREKRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETEQEVAAD 387
R RR +K +R + GE PP ++ + + +E E EV D
Sbjct: 3308 RGRRSKKERRR------GRKEGEEDQNPPCPRLSRELL--DEKEPEVLQD 3349
Score = 39.7 bits (91), Expect = 0.007
Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 29/209 (13%)
Query: 160 KGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLC 219
+G +G+E Q+ L EL+ + P VL + L D + + Y LP DL
Sbjct: 1422 RGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLG 1472
Query: 220 EMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSM 277
+ + + +Y +++ L+ K ++E + + P L+ E P +
Sbjct: 1473 QPYSSAVY------SLEEQYLGLALDVDRTKKDQEEEEDQGPPCPRLSRELLEVVEPEVL 1526
Query: 278 RDHIDYRCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRR 337
+D +D RC P++ P S C + + + S D+ I E + K+R
Sbjct: 1527 QDSLD-RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI----EKKGKGKKR 1580
Query: 338 RRRRREKRKRALLNLPGTQTSGEAKDGPP 366
R RR +K +R + GE PP
Sbjct: 1581 RGRRSKKERRR------GRKEGEEDQNPP 1603
Score = 39.7 bits (91), Expect = 0.007
Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 29/209 (13%)
Query: 160 KGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLC 219
+G +G+E Q+ L EL+ + P VL + L D + + Y LP DL
Sbjct: 2567 RGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLG 2617
Query: 220 EMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSM 277
+ + + +Y +++ L+ K ++E + + P L+ E P +
Sbjct: 2618 QPYSSAVY------SLEEQYLGLALDVDRTKKDQEEEEDQGPPCPRLSRELLEVVEPEVL 2671
Query: 278 RDHIDYRCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRR 337
+D +D RC P++ P S C + + + S D+ I E + K+R
Sbjct: 2672 QDSLD-RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI----EKKGKGKKR 2725
Query: 338 RRRRREKRKRALLNLPGTQTSGEAKDGPP 366
R RR +K +R + GE PP
Sbjct: 2726 RGRRSKKERRR------GRKEGEEDQNPP 2748
Score = 39.7 bits (91), Expect = 0.007
Identities = 48/209 (22%), Positives = 84/209 (40%), Gaps = 29/209 (13%)
Query: 160 KGNDKGDESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLC 219
+G +G+E Q+ L EL+ + P VL + L D + + Y LP DL
Sbjct: 3318 RGRKEGEEDQNPPCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLG 3368
Query: 220 EMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSM 277
+ + + +Y +++ L+ K ++E + + P L+ E P +
Sbjct: 3369 QPYSSAVY------SLEEQYLGLALDVDRTKKDQEEEEDQGPPCPRLSRELLEVVEPEVL 3422
Query: 278 RDHIDYRCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRR 337
+D +D RC P++ P S C + + + S D+ I E + K+R
Sbjct: 3423 QDSLD-RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI----EKKGKGKKR 3476
Query: 338 RRRRREKRKRALLNLPGTQTSGEAKDGPP 366
R RR +K +R + GE PP
Sbjct: 3477 RGRRSKKERRR------GRKEGEEDQNPP 3499
>gi|12758125 ribosomal RNA processing 8, methyltransferase, homolog
[Homo sapiens]
Length = 456
Score = 38.9 bits (89), Expect = 0.011
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 15/118 (12%)
Query: 329 EAAAEDKRRRRRRREKRKRALLNLPGTQTSG------EAKDGPPKKQVCGDSIKPEETEQ 382
++A ++KR+R+ ++ + +L +G + PPK+ S KP T
Sbjct: 125 DSAEDEKRKRKCQKHAPINSAQHLDNVDQTGPKAWKGSTTNDPPKQSPGSTSPKPPHT-- 182
Query: 383 EVAADETRNLPHSKQGNKNDLEMGIKAARPEIADRATSEVPGSQASPNPVPGDGLHRA 440
++ + RN +K+ KN K P++ D+A +E P + +PVP H A
Sbjct: 183 -LSRKQWRNRQKNKRRCKN------KFQPPQVPDQAPAEAPTEKTEVSPVPRTDSHEA 233
>gi|157266285 hypothetical protein LOC728936 [Homo sapiens]
Length = 670
Score = 38.1 bits (87), Expect = 0.019
Identities = 52/218 (23%), Positives = 91/218 (41%), Gaps = 30/218 (13%)
Query: 166 DESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLCEMFPAG 225
+E Q S L EL+ + P VL + L D + + Y LP DL + + +
Sbjct: 413 EEDQDPSCPRLSRELLDEKEPEVLQDSL-DRCYSTPSDYLELP--------DLGQPYSSA 463
Query: 226 IYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSMRDHIDY 283
+Y + +++ L+ K ++E + + P L+ E P ++D +D
Sbjct: 464 VYSLE------EQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLD- 516
Query: 284 RCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRRRRRRRE 343
RC P++ P S C + + + S D+ I ++ KRR RR ++
Sbjct: 517 RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI---EKKGKGKKRRGRRSKK 572
Query: 344 KRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETE 381
KR+R + GE D PP ++ G ++ EE E
Sbjct: 573 KRRRG-------RKEGE-DDNPPCPRLNGVLMEVEEPE 602
>gi|92110019 hypothetical protein LOC55672 [Homo sapiens]
Length = 1214
Score = 37.7 bits (86), Expect = 0.025
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 30/219 (13%)
Query: 166 DESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLCEMFPAG 225
+E Q S L EL+ + P VL + L D + + Y LP DL + + +
Sbjct: 955 EEDQDPSCPRLSRELLDEKEPEVLQDSL-DRCYSTPSGYLELP--------DLGQPYRSA 1005
Query: 226 IYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSMRDHIDY 283
+Y + +++ L+ K ++E + + P L+ E P ++D +D
Sbjct: 1006 VYSLE------EQYLGLALDVDRIKKDQEEEEDQGPPCPRLSRELLEAVEPEVLQDSLD- 1058
Query: 284 RCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRRRRR-RR 342
RC P++ P S S++ + + +D E + K ++RR RR
Sbjct: 1059 RCYSTPSSCLEQPDSCLPYGSSF-------YALEEKHVGFSLDVGEIEKKGKGKKRRGRR 1111
Query: 343 EKRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETE 381
+KR + GE PP ++ G ++ EE E
Sbjct: 1112 STKKRRRRG----RKEGEEDQNPPCPRLSGMLMEVEEPE 1146
>gi|29789405 hypothetical protein LOC284565 [Homo sapiens]
Length = 670
Score = 37.4 bits (85), Expect = 0.033
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 166 DESQSQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNFYAHLPESLGTFTADLCEMFPAG 225
+E Q S L EL+ + P VL + L D + + Y LP DL + + +
Sbjct: 413 EEDQDPSCPRLSRELLDEKEPEVLQDSL-DRCYSTPSDYLELP--------DLGQPYSSA 463
Query: 226 IYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTLEFCNY--PSSMRDHIDY 283
+Y + +++ L K ++E + + P L+ E P ++D +D
Sbjct: 464 VYSLE------EQYLGLALAVDRIKKDQEEEEDQGPPCPRLSRELLEVVEPEVLQDSLD- 516
Query: 284 RCCLPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRRRRRRRE 343
RC P++ P S C + + + S D+ I ++ KRR RR ++
Sbjct: 517 RCYSTPSSCLEQPDS-CQPYGSSFYALEEKHVGFSLDVGEI---EKKGKGKKRRGRRSKK 572
Query: 344 KRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETE 381
KR+R + GE D PP ++ G ++ EE E
Sbjct: 573 KRRRG-------RKEGE-DDNPPCPRLYGVLMEVEEPE 602
>gi|85067507 CCR4-NOT transcription complex, subunit 7 isoform 1
[Homo sapiens]
Length = 285
Score = 37.0 bits (84), Expect = 0.043
Identities = 63/257 (24%), Positives = 98/257 (38%), Gaps = 27/257 (10%)
Query: 36 VVDVQSNNFKEMWPSLLLAIKTANFVAVDTELSGLGDRK-SLLNQCIEERYKAVCHAART 94
+ +V + N E + I+ N+VA+DTE G+ R + +Y+ +
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 95 RSILSLGLACFKRQPDKGEHSYLAQV---FNLTLLCMEEYVIEPKSVQFLIQHGFNFNQQ 151
I+ LGL Q + + Q FNLT E + S++ L
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLT-----EDMYAQDSIELLT--------- 117
Query: 152 YAQGIPYHKGNDKGDESQ--SQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNF-YAHLP 208
GI + K ++G E+Q ++ + T + L + L H+G D +L + ++LP
Sbjct: 118 -TSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSG-YDFGYLIKILTNSNLP 175
Query: 209 ESLGTFTADLCEMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHLTL 268
E F L FP IYD KY + E A + G Q AGS L
Sbjct: 176 EEELDFFEILRLFFPV-IYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLT 234
Query: 269 EFCNYPSS---MRDHID 282
+ DHID
Sbjct: 235 GMAFFKMREMFFEDHID 251
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 36.6 bits (83), Expect = 0.056
Identities = 35/130 (26%), Positives = 52/130 (40%), Gaps = 16/130 (12%)
Query: 287 LPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLIIDTDEAAAEDKRRRRRRREKRK 346
LPP+ PTS DN GP P + D + T A ++ + R+ KR+
Sbjct: 995 LPPSA----PTSADDNIKTPAERLRGPLPPSADDN---LKTPPLATQEAEAEKPRKPKRQ 1047
Query: 347 RALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETEQEVAADETRNLPHSKQGNKNDLEMG 406
RA P + PK++ GD + ++ AAD + P K+ D+E
Sbjct: 1048 RAAEMEPPPE---------PKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDVEPS 1098
Query: 407 IKAARPEIAD 416
K R AD
Sbjct: 1099 RKPKRRRAAD 1108
>gi|197333695 poly(A)-specific ribonuclease (deadenylation nuclease)
isoform 2 [Homo sapiens]
Length = 578
Score = 35.8 bits (81), Expect = 0.095
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 16/90 (17%)
Query: 97 ILSLGLACFKRQPDKGEHSYLAQVFNLTLLCME--------EYVIEPKSVQFLIQHGFNF 148
+ GL FK D + Y+ + FN + ++V + S+ FL GF+F
Sbjct: 5 LFQFGLCTFKY--DYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQGFDF 62
Query: 149 NQQYAQGIPY------HKGNDKGDESQSQS 172
N+ + GIPY + ++ DE +SQ+
Sbjct: 63 NKVFRNGIPYLNQEEERQLREQYDEKRSQA 92
>gi|85067505 CCR4-NOT transcription complex, subunit 7 isoform 2
[Homo sapiens]
Length = 244
Score = 35.8 bits (81), Expect = 0.095
Identities = 59/238 (24%), Positives = 93/238 (39%), Gaps = 24/238 (10%)
Query: 36 VVDVQSNNFKEMWPSLLLAIKTANFVAVDTELSGLGDRK-SLLNQCIEERYKAVCHAART 94
+ +V + N E + I+ N+VA+DTE G+ R + +Y+ +
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCNVDL 71
Query: 95 RSILSLGLACFKRQPDKGEHSYLAQV---FNLTLLCMEEYVIEPKSVQFLIQHGFNFNQQ 151
I+ LGL Q + + Q FNLT E + S++ L
Sbjct: 72 LKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLT-----EDMYAQDSIELLT--------- 117
Query: 152 YAQGIPYHKGNDKGDESQ--SQSVRTLFLELIRARRPLVLHNGLIDLVFLYQNF-YAHLP 208
GI + K ++G E+Q ++ + T + L + L H+G D +L + ++LP
Sbjct: 118 -TSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSG-YDFGYLIKILTNSNLP 175
Query: 209 ESLGTFTADLCEMFPAGIYDTKYAAEFHARFVASYLEYAFRKCERENGKQRAAGSPHL 266
E F L FP IYD KY + E A + G Q AGS L
Sbjct: 176 EEELDFFEILRLFFPV-IYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSL 232
>gi|122937492 SET domain containing 5 [Homo sapiens]
Length = 1442
Score = 35.0 bits (79), Expect = 0.16
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 309 CPLGPQCPQSHDIDLIIDTDEA---AAEDKRRRRRRREKRKRALLNLPGTQTSGEAKDGP 365
CP+ + P + ++ L+ AE +RR+ RR+E ++++ P
Sbjct: 411 CPIQKRNPNATELPLLPPPPSLPTIGAETRRRKARRKELEMEQQNEASEENNDQQSQEVP 470
Query: 366 PKKQVCGD-------SIKPEETEQEVAADETRNLPHSKQ 397
K V D KPEE ++EV D+ NL HS++
Sbjct: 471 EKVTVSSDHEEVDNPEEKPEEEKEEVI-DDQENLAHSRR 508
>gi|11545835 TSPY-like 2 [Homo sapiens]
Length = 693
Score = 34.3 bits (77), Expect = 0.28
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 304 SAYGWCPLGPQCPQSHDIDLII--DTDEAAAEDKRRRRRRREKRKR 347
SA GW P P+S + +II D DE E R RRRR +R+R
Sbjct: 150 SAVGWAPQRLVDPKSKEEAIIIVEDEDEDERESMRSSRRRRRRRRR 195
>gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens]
Length = 494
Score = 33.9 bits (76), Expect = 0.36
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 292 HRPHPTSICDNFSAYGWCPLGPQCPQSHDID 322
H + T +C F G+CP GP+C H+ D
Sbjct: 189 HPKYKTELCRTFHTIGFCPYGPRCHFIHNAD 219
>gi|7661948 malectin [Homo sapiens]
Length = 292
Score = 33.1 bits (74), Expect = 0.62
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 363 DGPPKKQVCGDSIKPEETEQEVAADETRNLPHSKQGNKNDLEMGIKAARPEIADRATSEV 422
D PK Q K EE E+E DE NL KQ NKN ++ G + P +D ++
Sbjct: 216 DDVPKLQPHPGLEKKEEEEEEEEYDEGSNL--KKQTNKNRVQSGPRTPNPYASDNSSLMF 273
Query: 423 P 423
P
Sbjct: 274 P 274
>gi|15812180 butyrate response factor 1 [Homo sapiens]
Length = 338
Score = 32.3 bits (72), Expect = 1.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 292 HRPHPTSICDNFSAYGWCPLGPQCPQSHDID 322
H + T +C F G+CP GP+C H+ +
Sbjct: 150 HPKYKTELCRTFHTIGFCPYGPRCHFIHNAE 180
>gi|187828892 calcium channel, alpha 1A subunit isoform 4 [Homo
sapiens]
Length = 2506
Score = 32.0 bits (71), Expect = 1.4
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 20/122 (16%)
Query: 329 EAAAEDKRRRRRRREKRKRALLNLPGTQTSGE-------AKDGPPKKQVCGDSIKPEETE 381
+A EDK RR RRR++ + + + + G S + PP + D++K +
Sbjct: 1016 DARREDKERRHRRRKENQGSGVPVSGPNLSTTRPIQQDLGRQDPPLAEDI-DNMKNNKLA 1074
Query: 382 QEVAADETRNLPH-------SKQGNKND----LEMGIKAARPE-IADRATSEVPGSQASP 429
+A +L H +K GN D L + A P+ A R T PG+ ++P
Sbjct: 1075 TAESAAPHGSLGHAGLPQSPAKMGNSTDPGPMLAIPAMATNPQNAASRRTPNNPGNPSNP 1134
Query: 430 NP 431
P
Sbjct: 1135 GP 1136
>gi|187828880 calcium channel, alpha 1A subunit isoform 3 [Homo
sapiens]
Length = 2261
Score = 32.0 bits (71), Expect = 1.4
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 20/122 (16%)
Query: 329 EAAAEDKRRRRRRREKRKRALLNLPGTQTSGE-------AKDGPPKKQVCGDSIKPEETE 381
+A EDK RR RRR++ + + + + G S + PP + D++K +
Sbjct: 1017 DARREDKERRHRRRKENQGSGVPVSGPNLSTTRPIQQDLGRQDPPLAEDI-DNMKNNKLA 1075
Query: 382 QEVAADETRNLPH-------SKQGNKND----LEMGIKAARPE-IADRATSEVPGSQASP 429
+A +L H +K GN D L + A P+ A R T PG+ ++P
Sbjct: 1076 TAESAAPHGSLGHAGLPQSPAKMGNSTDPGPMLAIPAMATNPQNAASRRTPNNPGNPSNP 1135
Query: 430 NP 431
P
Sbjct: 1136 GP 1137
>gi|239753856 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 32.0 bits (71), Expect = 1.4
Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 40/169 (23%)
Query: 309 CPLGPQCPQSHDIDLIIDTDEAAAEDKRRRRRRREKRKRALLNLPGTQTSGE------AK 362
C GP+ P + + A + +RRR R+R+ P GE +
Sbjct: 30 CGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRD---------PPADREGEREVLRGQR 80
Query: 363 DGPPKKQVCGDSI-KPEETEQEVAADETRNLPHSKQGNKNDLEMGIKAARPEIADRATSE 421
+ PP Q+ + + P + + + R +P G + L G+ + A
Sbjct: 81 ESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLPKGV-----PLRPGAEPP 135
Query: 422 VPGSQASPNPVPGDGLHRAGFDAFMTGYVMAYVEVSQGPQPCSSGPWLP 470
P S P P GL P PC+SG +P
Sbjct: 136 APASDPDLEPTPPGGL-------------------KSPPLPCASGQGVP 165
>gi|239748415 PREDICTED: hypothetical protein [Homo sapiens]
Length = 208
Score = 32.0 bits (71), Expect = 1.4
Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 40/169 (23%)
Query: 309 CPLGPQCPQSHDIDLIIDTDEAAAEDKRRRRRRREKRKRALLNLPGTQTSGE------AK 362
C GP+ P + + A + +RRR R+R+ P GE +
Sbjct: 30 CGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRD---------PPADREGEREVLRGQR 80
Query: 363 DGPPKKQVCGDSI-KPEETEQEVAADETRNLPHSKQGNKNDLEMGIKAARPEIADRATSE 421
+ PP Q+ + + P + + + R +P G + L G+ + A
Sbjct: 81 ESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLAKGV-----PLRPGAEPP 135
Query: 422 VPGSQASPNPVPGDGLHRAGFDAFMTGYVMAYVEVSQGPQPCSSGPWLP 470
P S P P GL P PC+SG +P
Sbjct: 136 APASDPDLEPTPPGGL-------------------KSPPLPCASGQGVP 165
>gi|239742343 PREDICTED: hypothetical protein XP_002342497 [Homo
sapiens]
Length = 208
Score = 32.0 bits (71), Expect = 1.4
Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 40/169 (23%)
Query: 309 CPLGPQCPQSHDIDLIIDTDEAAAEDKRRRRRRREKRKRALLNLPGTQTSGE------AK 362
C GP+ P + + A + +RRR R+R+ P GE +
Sbjct: 30 CGRGPETPSRSQSPKLRRVAKVAGQLRRRRLRQRD---------PPADREGEREVLRGQR 80
Query: 363 DGPPKKQVCGDSI-KPEETEQEVAADETRNLPHSKQGNKNDLEMGIKAARPEIADRATSE 421
+ PP Q+ + + P + + + R +P G + L G+ + A
Sbjct: 81 ESPPPPQLPPELLTNPSGSAIQSSPSRFRRVPADNAGPRRQLAKGV-----PLRPGAEPP 135
Query: 422 VPGSQASPNPVPGDGLHRAGFDAFMTGYVMAYVEVSQGPQPCSSGPWLP 470
P S P P GL P PC+SG +P
Sbjct: 136 APASDPDLEPTPPGGL-------------------KSPPLPCASGQGVP 165
>gi|109633041 protein tyrosine phosphatase, receptor type, F isoform 1
precursor [Homo sapiens]
Length = 1907
Score = 31.6 bits (70), Expect = 1.8
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 316 PQSHDIDLIIDTDEAAAEDKRRRRRRREKRK----RALLNLPGTQTSGEAKD 363
P+ ++D +++ E E++RRRRR+ E+ K L LP T T G+ K+
Sbjct: 1154 PEELELDELLEAIEQGGEEQRRRRRQAERLKPYVAAQLDVLPETFTLGDKKN 1205
>gi|109633039 protein tyrosine phosphatase, receptor type, F isoform 2
precursor [Homo sapiens]
Length = 1898
Score = 31.6 bits (70), Expect = 1.8
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 316 PQSHDIDLIIDTDEAAAEDKRRRRRRREKRK----RALLNLPGTQTSGEAKD 363
P+ ++D +++ E E++RRRRR+ E+ K L LP T T G+ K+
Sbjct: 1145 PEELELDELLEAIEQGGEEQRRRRRQAERLKPYVAAQLDVLPETFTLGDKKN 1196
>gi|110431350 endo-beta-N-acetylglucosaminidase [Homo sapiens]
Length = 743
Score = 31.6 bits (70), Expect = 1.8
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 329 EAAAEDKRRRRRRREKRKRALLNLP--GTQTSGEAKDGPPKKQVCGDSIKPEETE 381
EAAA R RR +R+ L P GTQ E ++ P+++ G SIK EE E
Sbjct: 2 EAAAVTVTRSATRRRRRQLQGLAAPEAGTQEEQEDQEPRPRRRRPGRSIKDEEEE 56
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 31.6 bits (70), Expect = 1.8
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 326 DTDEAAAEDKRRRRRRREKRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETEQEVA 385
D A + RR + K ALL P + + GPP + + T++ V
Sbjct: 285 DLQPQLASEAPRRPAQPPPSKSALLPPPSPRVGKRSPPGPPAQPAATPTSPHRRTQEPVL 344
Query: 386 ADETRNLPHSKQGNKNDLEMGIKAARPEIADRATS--EVPGSQAS 428
++T K+G K+ K++ P +A A S + P S+AS
Sbjct: 345 PEDTTT--EEKRGKKS------KSSGPSLAGTAESRPQTPLSEAS 381
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 31.6 bits (70), Expect = 1.8
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 367 KKQVCGDSIKPEETEQEVAADETRNLPHSKQGNKNDLEMGIKAARPEIADRATS 420
+++VC D+++ E E +ETR+L HS Q LE +K+ + ++ D + S
Sbjct: 2275 QQKVC-DTLQGENKELLSQLEETRHLYHSSQNELAKLESELKSLKDQLTDLSNS 2327
>gi|13375901 PRKR interacting protein 1 (IL11 inducible) [Homo
sapiens]
Length = 184
Score = 31.6 bits (70), Expect = 1.8
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 325 IDTDEAAAED---KRRRRRRREKRKRALLNLPGTQTSGEAKDGPPKKQVCGDSIKPEETE 381
++ ++ AAE+ KRR++R++ K K+ L + + G PK+Q S + TE
Sbjct: 113 LEKNKIAAEEQTAKRRKKRQKLKEKKLLAKKMKLEQKKQEGPGQPKEQGSSSSAEASGTE 172
Query: 382 QE 383
+E
Sbjct: 173 EE 174
>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
Length = 1133
Score = 31.2 bits (69), Expect = 2.3
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 23/148 (15%)
Query: 287 LPPATHRPHPTSICDNFSAYGWCPLGPQCPQSHDIDLI---IDTDEAAAEDKRRRRRRR- 342
LPP+ P S DN GP P S D +L + T EA AE R+ +R+R
Sbjct: 977 LPPSA----PPSADDNIKTPAERLRGP-LPPSADDNLKTPPLATQEAEAEKPRKPKRQRA 1031
Query: 343 -------EKRKRALLNLPGTQ-------TSGEAKDGPPKKQVCGDSIKPEETEQEVAADE 388
E ++R + ++ ++ E PK++ GD + ++ AAD
Sbjct: 1032 AEMEPPPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVGDVEPSRKPKRRRAADV 1091
Query: 389 TRNLPHSKQGNKNDLEMGIKAARPEIAD 416
+ P K+ D+E K R AD
Sbjct: 1092 EPSSPEPKRRRVGDVEPSRKPKRRRAAD 1119
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,227,826
Number of Sequences: 37866
Number of extensions: 1043924
Number of successful extensions: 3896
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 3780
Number of HSP's gapped (non-prelim): 180
length of query: 510
length of database: 18,247,518
effective HSP length: 107
effective length of query: 403
effective length of database: 14,195,856
effective search space: 5720929968
effective search space used: 5720929968
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.