Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MLEC Sequence: fasta or formatted (292aa) NCBI GI: 7661948
Description:

malectin

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         21           2
 C cysteine            1.0          3           1
 D aspartate           5.1         15           2
 E glutamate           8.6         25           8
 F phenylalanine       4.1         12           1
 G glycine             9.6         28           2
 H histidine           2.4          7           1
 I isoleucine          4.8         14           2
 K lysine              5.8         17           2
 L leucine            10.3         30           6
 M methionine          1.7          5           1
 N asparagine          3.4         10           1
 P proline             6.2         18           2
 Q glutamine           3.1          9           2
 R arginine            4.5         13           1
 S serine              4.5         13           2
 T threonine           3.4         10           1
 V valine              9.6         28           3
 W tryptophan          0.7          2           1
 Y tyrosine            4.1         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   malectin 
INO80B                0.014   high mobility group AT-hook 1-like 4 
BCL11A                0.014   B-cell CLL/lymphoma 11A isoform 1 
BCL11A                0.014   B-cell CLL/lymphoma 11A isoform 2 
TOE1                  0.014   target of EGR1, member 1 (nuclear) 
CNKSR2                0.014   connector enhancer of kinase suppressor of Ras 2 [Ho...
DNAJC14               0.012   dopamine receptor interacting protein 
ITGAE                 0.011   integrin, alpha E precursor 
PRUNE2                0.011   prune homolog 2 
MMP24                 0.011   matrix metalloproteinase 24 preproprotein 
LOC100294088          0.011   PREDICTED: hypothetical protein, partial 
MYST4                 0.011   MYST histone acetyltransferase (monocytic leukemia)...
FAM177A1              0.011   hypothetical protein LOC283635 isoform 2 
FAM177A1              0.011   hypothetical protein LOC283635 isoform 1 
PLEKHG5               0.011   pleckstrin homology domain containing family G membe...
PLEKHG5               0.011   pleckstrin homology domain containing family G memb...
PLEKHG5               0.011   pleckstrin homology domain containing family G memb...
PLEKHG5               0.011   pleckstrin homology domain containing family G memb...
PLEKHG5               0.011   pleckstrin homology domain containing family G memb...
ADAM11                0.011   ADAM metallopeptidase domain 11 preproprotein 
PROCA1                0.009   protein interacting with cyclin A1 
KIAA1429              0.009   hypothetical protein LOC25962 isoform 1 
KIAA1429              0.009   hypothetical protein LOC25962 isoform 2 
SLC4A1AP              0.009   solute carrier family 4 (anion exchanger), member 1...
RANGAP1               0.009   Ran GTPase activating protein 1 
CACNA1A               0.009   calcium channel, alpha 1A subunit isoform 4 
CACNA1A               0.009   calcium channel, alpha 1A subunit isoform 3 
ALK                   0.009   anaplastic lymphoma kinase 
ANP32A                0.009   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
LOC647020             0.009   PREDICTED: similar to acidic (leucine-rich) nuclear...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press