Guide to the Human Genome
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Name: LOC100293905 Sequence: fasta or formatted (368aa) NCBI GI: 239757761
Description:

PREDICTED: similar to gastrin-releasing peptide receptor

Referenced in:

Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         25           2
 C cysteine            3.5         13           2
 D aspartate           2.7         10           2
 E glutamate           2.2          8           2
 F phenylalanine       5.7         21           1
 G glycine             3.5         13           1
 H histidine           4.1         15           1
 I isoleucine         10.1         37           2
 K lysine              4.1         15           2
 L leucine            12.0         44           4
 M methionine          2.2          8           1
 N asparagine          4.6         17           1
 P proline             4.9         18           1
 Q glutamine           2.2          8           1
 R arginine            3.8         14           1
 S serine             10.1         37           2
 T threonine           5.2         19           2
 V valine              7.1         26           1
 W tryptophan          1.1          4           1
 Y tyrosine            4.3         16           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to gastrin-releasing peptide rec... 
GRPR                  1.000   gastrin-releasing peptide receptor 
NMBR                  0.548   neuromedin B receptor 
BRS3                  0.502   bombesin-like receptor 3 
EDNRB                 0.213   endothelin receptor type B isoform 1 precursor [Hom...
EDNRB                 0.213   endothelin receptor type B isoform 1 precursor 
EDNRB                 0.207   endothelin receptor type B isoform 2 precursor 
EDNRA                 0.204   endothelin receptor type A 
GALR1                 0.181   galanin receptor 1 
PRLHR                 0.172   G protein-coupled receptor 10 
HCRTR2                0.160   orexin receptor 2 
NPY1R                 0.159   neuropeptide Y receptor Y1 
APLNR                 0.156   apelin receptor 
QRFPR                 0.156   G protein-coupled receptor 103 
TACR1                 0.152   tachykinin receptor 1 isoform long 
PPYR1                 0.152   pancreatic polypeptide receptor 1 
GALR2                 0.152   galanin receptor 2 
GPR83                 0.149   G protein-coupled receptor 83 
NPY2R                 0.146   neuropeptide Y receptor Y2 
GPR37                 0.140   G protein-coupled receptor 37 
TACR1                 0.139   tachykinin receptor 1 isoform short 
SSTR4                 0.135   somatostatin receptor 4 
TACR3                 0.135   tachykinin receptor 3 
AGTR2                 0.131   angiotensin II receptor, type 2 
OPRL1                 0.131   opiate receptor-like 1 
OPRL1                 0.131   opiate receptor-like 1 
NPFFR1                0.131   neuropeptide FF receptor 1 
NPFFR2                0.129   neuropeptide FF receptor 2 isoform 2 
NPFFR2                0.129   neuropeptide FF receptor 2 isoform 1 
NPFFR2                0.129   neuropeptide FF receptor 2 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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