Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: FKSG83 Sequence: fasta or formatted (189aa) NCBI GI: 157151767
Description:

FKSG83

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6          5           1
 C cysteine            3.2          6           1
 D aspartate           1.1          2           1
 E glutamate           2.1          4           1
 F phenylalanine      10.1         19           2
 G glycine             1.6          3           1
 H histidine           4.2          8           1
 I isoleucine         10.1         19           2
 K lysine              3.2          6           1
 L leucine            10.6         20           2
 M methionine          4.2          8           1
 N asparagine          5.3         10           1
 P proline             3.2          6           1
 Q glutamine           2.6          5           1
 R arginine            3.2          6           1
 S serine             12.2         23           3
 T threonine           7.4         14           1
 V valine              6.3         12           1
 W tryptophan          1.1          2           1
 Y tyrosine            5.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FKSG83 
VN1R4                 0.099   vomeronasal 1 receptor 4 
VN1R1                 0.097   vomeronasal 1 receptor 1 
VN1R2                 0.088   vomeronasal 1 receptor 2 
LOC100129315          0.080   PREDICTED: similar to vomeronasal 1 receptor, C3 [H...
LOC100129315          0.080   PREDICTED: similar to vomeronasal 1 receptor, C3 [H...
LOC100129315          0.080   PREDICTED: similar to vomeronasal 1 receptor, C3 [H...
LOC100294489          0.075   PREDICTED: similar to hCG1817096 
LOC100129126          0.047   PREDICTED: hypothetical LOC100129126 
LOC100129126          0.047   PREDICTED: hypothetical LOC100129126 
LOC100129126          0.047   PREDICTED: hypothetical LOC100129126 
LOC100129126          0.047   PREDICTED: hypothetical LOC100129126 
VN1R5                 0.028   vomeronasal 1 receptor 5 
TAS2R39               0.022   taste receptor, type 2, member 39 
LOC134505             0.008   PREDICTED: similar to hCG39609 
LOC134505             0.008   PREDICTED: similar to hCG39609 
LOC134505             0.008   PREDICTED: similar to hCG39609 
CCRL1                 0.008   chemokine (C-C motif) receptor-like 1 
CCRL1                 0.008   chemokine (C-C motif) receptor-like 1 
SLC6A9                0.008   solute carrier family 6 member 9 isoform 3 
SLC6A9                0.008   solute carrier family 6 member 9 isoform 2 
SLC6A9                0.008   solute carrier family 6 member 9 isoform 1 
LOC100133515          0.008   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press