Guide to the Human Genome
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Name: EDNRB Sequence: fasta or formatted (442aa) NCBI GI: 4557547
Description:

endothelin receptor type B isoform 1 precursor

Referenced in:

Cardiovascular System
Peptide and Protein G-coupled Signals

Other entries for this name:
alt mRNA [442aa] endothelin receptor type B isoform 1 precursor
alt prot [436aa] endothelin receptor type B isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         31           1
 C cysteine            4.5         20           2
 D aspartate           3.2         14           1
 E glutamate           3.8         17           2
 F phenylalanine       4.8         21           2
 G glycine             4.8         21           1
 H histidine           1.1          5           1
 I isoleucine          7.7         34           2
 K lysine              6.6         29           2
 L leucine            12.9         57           2
 M methionine          2.3         10           1
 N asparagine          4.1         18           1
 P proline             6.3         28           3
 Q glutamine           2.7         12           1
 R arginine            4.5         20           2
 S serine              7.5         33           3
 T threonine           4.5         20           1
 V valine              6.3         28           2
 W tryptophan          2.3         10           2
 Y tyrosine            3.2         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   endothelin receptor type B isoform 1 precursor 
EDNRB                 1.000   endothelin receptor type B isoform 1 precursor [Hom...
EDNRB                 0.892   endothelin receptor type B isoform 2 precursor 
EDNRA                 0.515   endothelin receptor type A 
NMBR                  0.183   neuromedin B receptor 
GRPR                  0.174   gastrin-releasing peptide receptor 
LOC100293905          0.174   PREDICTED: similar to gastrin-releasing peptide rec...
BRS3                  0.164   bombesin-like receptor 3 
GPR37                 0.128   G protein-coupled receptor 37 
GPR37L1               0.119   G-protein coupled receptor 37 like 1 
SSTR4                 0.102   somatostatin receptor 4 
NPY2R                 0.102   neuropeptide Y receptor Y2 
OPRK1                 0.101   opioid receptor, kappa 1 
OPRM1                 0.100   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.100   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.100   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.100   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.100   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.100   opioid receptor, mu 1 isoform MOR-1B1 
OPRM1                 0.100   opioid receptor, mu 1 isoform MOR-1A 
OPRM1                 0.100   opioid receptor, mu 1 isoform MOR-1B4 
OPRM1                 0.100   opioid receptor, mu 1 isoform MOR-1O 
OPRM1                 0.100   opioid receptor, mu 1 isoform MOR-1X 
PRLHR                 0.100   G protein-coupled receptor 10 
QRFPR                 0.099   G protein-coupled receptor 103 
GALR1                 0.097   galanin receptor 1 
OPRL1                 0.097   opiate receptor-like 1 
OPRL1                 0.097   opiate receptor-like 1 
SSTR2                 0.095   somatostatin receptor 2 
SSTR1                 0.093   somatostatin receptor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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