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Search of human proteins with 154426266
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154426266 hypothetical protein LOC55049 isoform 2 [Homo
sapiens]
(179 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154426266 hypothetical protein LOC55049 isoform 2 [Homo sapiens] 350 3e-97
gi|154426324 hypothetical protein LOC55049 isoform 1 [Homo sapiens] 338 2e-93
gi|239757046 PREDICTED: similar to hCG1790759 [Homo sapiens] 32 0.22
gi|239751558 PREDICTED: similar to hCG1790759 [Homo sapiens] 32 0.22
gi|169212818 PREDICTED: similar to hCG1790759 [Homo sapiens] 32 0.22
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 32 0.22
gi|203096856 kinesin family member 7 [Homo sapiens] 32 0.38
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 31 0.50
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 30 1.1
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 30 1.1
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 30 1.1
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 30 1.1
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 30 1.1
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 30 1.1
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 30 1.1
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 30 1.1
gi|93141029 paralemmin isoform 2 [Homo sapiens] 30 1.4
gi|93141031 paralemmin isoform 1 [Homo sapiens] 30 1.4
gi|239750255 PREDICTED: similar to ovostatin-2 [Homo sapiens] 29 1.9
gi|239744583 PREDICTED: ovostatin 2 [Homo sapiens] 29 1.9
gi|8659574 transcription factor E3 [Homo sapiens] 28 3.2
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 28 3.2
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 28 3.2
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 28 3.2
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 28 4.2
gi|32698866 spindle pole body component 24 homolog [Homo sapiens] 28 4.2
gi|116488398 keratin 32 [Homo sapiens] 28 5.5
gi|239747341 PREDICTED: hypothetical protein [Homo sapiens] 27 7.2
gi|169204289 PREDICTED: ovostatin [Homo sapiens] 27 7.2
gi|239741166 PREDICTED: hypothetical protein [Homo sapiens] 27 7.2
>gi|154426266 hypothetical protein LOC55049 isoform 2 [Homo sapiens]
Length = 179
Score = 350 bits (899), Expect = 3e-97
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MITETAAEPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLE 60
MITETAAEPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLE
Sbjct: 1 MITETAAEPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLE 60
Query: 61 EGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAELGGPRRQPLLAGHVRSLQ 120
EGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAELGGPRRQPLLAGHVRSLQ
Sbjct: 61 EGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAELGGPRRQPLLAGHVRSLQ 120
Query: 121 ELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEAISEVLQDLRFDAESAE 179
ELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEAISEVLQDLRFDAESAE
Sbjct: 121 ELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEAISEVLQDLRFDAESAE 179
>gi|154426324 hypothetical protein LOC55049 isoform 1 [Homo sapiens]
Length = 201
Score = 338 bits (866), Expect = 2e-93
Identities = 179/201 (89%), Positives = 179/201 (89%), Gaps = 22/201 (10%)
Query: 1 MITETAAEPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLE 60
MITETAAEPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLE
Sbjct: 1 MITETAAEPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLE 60
Query: 61 E----------------------GHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLA 98
E GHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLA
Sbjct: 61 EWLAPVQGLRAWGRGLRVPTCRRGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLA 120
Query: 99 VEAELGGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVI 158
VEAELGGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVI
Sbjct: 121 VEAELGGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVI 180
Query: 159 KTMEAISEVLQDLRFDAESAE 179
KTMEAISEVLQDLRFDAESAE
Sbjct: 181 KTMEAISEVLQDLRFDAESAE 201
>gi|239757046 PREDICTED: similar to hCG1790759 [Homo sapiens]
Length = 737
Score = 32.3 bits (72), Expect = 0.22
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 1 MITETAAEPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAE 51
++T +AA P PA PA +A + RG P API LV R+H Q E
Sbjct: 154 LLTPSAARPDPPAPPA--QAWDRRGSVTPT----GAPIWELVSRVHGYQKE 198
>gi|239751558 PREDICTED: similar to hCG1790759 [Homo sapiens]
Length = 771
Score = 32.3 bits (72), Expect = 0.22
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 1 MITETAAEPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAE 51
++T +AA P PA PA +A + RG P API LV R+H Q E
Sbjct: 188 LLTPSAARPDPPAPPA--QAWDRRGSVTPT----GAPIWELVSRVHGYQKE 232
>gi|169212818 PREDICTED: similar to hCG1790759 [Homo sapiens]
Length = 771
Score = 32.3 bits (72), Expect = 0.22
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 1 MITETAAEPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAE 51
++T +AA P PA PA +A + RG P API LV R+H Q E
Sbjct: 188 LLTPSAARPDPPAPPA--QAWDRRGSVTPT----GAPIWELVSRVHGYQKE 232
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 32.3 bits (72), Expect = 0.22
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 19 EATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLEEGHRQYLRSGPDYDFARY 78
+ TE + E + + I Q I Q Q E ++ FR+ E+ ++ + D D
Sbjct: 178 QTTEQQQETERSKEEAEHAISQFQQEIQQRQNEASREFRKKEKLEKELKQIQADMD--SR 235
Query: 79 RSTVHGVTQAFAAASREVLAVEAELGGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMET 138
++ + + Q + E+ +E +L + Q +L + R+ +ELEQ ++ L Q E
Sbjct: 236 QTEIKALQQYVQKSKEELQKLEQQL---KEQKIL--NERAAKELEQFQMRNAKLQQENEQ 290
Query: 139 PELAGQEDAVRMQQLKMKVIKTMEAISEVLQDL 171
L ++ + QQ +++ E + ++ D+
Sbjct: 291 HSLVCEQLSQENQQKALELKAKEEEVHQMRLDI 323
>gi|203096856 kinesin family member 7 [Homo sapiens]
Length = 1343
Score = 31.6 bits (70), Expect = 0.38
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 17/133 (12%)
Query: 43 QRIHQLQAERAQGFRRLEEGHRQYLR-SGPDYDFARYRSTVHGVTQAFAAASREVLAV-E 100
QRI +L+ E Q L EG RQ G + A RS + + AAA +V + E
Sbjct: 743 QRIRELEQEAEQVRAELSEGQRQLRELEGKELQDAGERSRLQEFRRRVAAAQSQVQVLKE 802
Query: 101 AELGGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQ------EDAVRMQQLK 154
+ R L A + LQELE+ +QLM + GQ E+ + ++L+
Sbjct: 803 KKQATERLVSLSAQSEKRLQELERN-------VQLMRQQQ--GQLQRRLREETEQKRRLE 853
Query: 155 MKVIKTMEAISEV 167
++ K + E+
Sbjct: 854 AEMSKRQHRVKEL 866
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 31.2 bits (69), Expect = 0.50
Identities = 44/179 (24%), Positives = 69/179 (38%), Gaps = 28/179 (15%)
Query: 18 EEATEARGREEPAWPWKDAPIRTLVQR---IHQLQAERAQGFRRLEEGHRQYLRSGPDYD 74
EE + R + E +A R L + +L E AQ R E HR+ ++
Sbjct: 732 EEVAQLRRKAEALGDELEAQARKLEAQNTEAARLSKELAQARRAEAEAHRE--AEAQAWE 789
Query: 75 FARYRSTVHGVTQ--------------AFAAASREV---------LAVEAELGGPRRQPL 111
AR R V Q A AAA RE L ++E R Q L
Sbjct: 790 QARLREAVEAAGQELESASQEREALVEALAAAGRERRQWEREGSRLRAQSEAAEERMQVL 849
Query: 112 LAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEAISEVLQD 170
+ + L+E E+ R AL +E + G+E R++ L+ ++ + E L++
Sbjct: 850 ESEGRQHLEEAERERREKEALQAELEKAVVRGKELGARLEHLQRELEQAALERQEFLRE 908
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 30.0 bits (66), Expect = 1.1
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 43 QRIHQLQAERAQGFRRLEEGHRQ-YLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEA 101
+++ Q AE QGF+R E RQ L + + + R QA A + +A
Sbjct: 2351 EQMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQA 2410
Query: 102 ELGGPRRQPLLAGHVRSLQELEQTRLGT---VALLQLMETPELAGQEDAVRMQQLKMKVI 158
E G ++L +T L T V L+Q +E DA R+++ ++
Sbjct: 2411 EEIG--------------EKLHRTELATQEKVTLVQTLEIQRQQSDHDAERLREAIAELE 2456
Query: 159 KTMEAISEVLQDLRFDAESAE 179
+ E + + + L+ +E +
Sbjct: 2457 REKEKLQQEAKLLQLKSEEMQ 2477
Score = 27.7 bits (60), Expect = 5.5
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 44 RIHQLQAERAQGFRRLEEGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAEL 103
R QL AE + R EE ++ L + + + AR R AA EV ++A++
Sbjct: 1971 RQRQLAAEEERRRREAEERVQKSLAA--EEEAARQRK----------AALEEVERLKAKV 2018
Query: 104 GGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEA 163
RR +R E E R +A + + + A +QQ + ++ +T++
Sbjct: 2019 EEARR-------LRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ 2071
Query: 164 ISEVLQDLRFDAESA 178
VL LR +AE+A
Sbjct: 2072 EQSVLDQLRGEAEAA 2086
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 30.0 bits (66), Expect = 1.1
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 43 QRIHQLQAERAQGFRRLEEGHRQ-YLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEA 101
+++ Q AE QGF+R E RQ L + + + R QA A + +A
Sbjct: 2355 EQMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQA 2414
Query: 102 ELGGPRRQPLLAGHVRSLQELEQTRLGT---VALLQLMETPELAGQEDAVRMQQLKMKVI 158
E G ++L +T L T V L+Q +E DA R+++ ++
Sbjct: 2415 EEIG--------------EKLHRTELATQEKVTLVQTLEIQRQQSDHDAERLREAIAELE 2460
Query: 159 KTMEAISEVLQDLRFDAESAE 179
+ E + + + L+ +E +
Sbjct: 2461 REKEKLQQEAKLLQLKSEEMQ 2481
Score = 27.7 bits (60), Expect = 5.5
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 44 RIHQLQAERAQGFRRLEEGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAEL 103
R QL AE + R EE ++ L + + + AR R AA EV ++A++
Sbjct: 1975 RQRQLAAEEERRRREAEERVQKSLAA--EEEAARQRK----------AALEEVERLKAKV 2022
Query: 104 GGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEA 163
RR +R E E R +A + + + A +QQ + ++ +T++
Sbjct: 2023 EEARR-------LRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ 2075
Query: 164 ISEVLQDLRFDAESA 178
VL LR +AE+A
Sbjct: 2076 EQSVLDQLRGEAEAA 2090
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 30.0 bits (66), Expect = 1.1
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 43 QRIHQLQAERAQGFRRLEEGHRQ-YLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEA 101
+++ Q AE QGF+R E RQ L + + + R QA A + +A
Sbjct: 2351 EQMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQA 2410
Query: 102 ELGGPRRQPLLAGHVRSLQELEQTRLGT---VALLQLMETPELAGQEDAVRMQQLKMKVI 158
E G ++L +T L T V L+Q +E DA R+++ ++
Sbjct: 2411 EEIG--------------EKLHRTELATQEKVTLVQTLEIQRQQSDHDAERLREAIAELE 2456
Query: 159 KTMEAISEVLQDLRFDAESAE 179
+ E + + + L+ +E +
Sbjct: 2457 REKEKLQQEAKLLQLKSEEMQ 2477
Score = 27.7 bits (60), Expect = 5.5
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 44 RIHQLQAERAQGFRRLEEGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAEL 103
R QL AE + R EE ++ L + + + AR R AA EV ++A++
Sbjct: 1971 RQRQLAAEEERRRREAEERVQKSLAA--EEEAARQRK----------AALEEVERLKAKV 2018
Query: 104 GGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEA 163
RR +R E E R +A + + + A +QQ + ++ +T++
Sbjct: 2019 EEARR-------LRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ 2071
Query: 164 ISEVLQDLRFDAESA 178
VL LR +AE+A
Sbjct: 2072 EQSVLDQLRGEAEAA 2086
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 30.0 bits (66), Expect = 1.1
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 43 QRIHQLQAERAQGFRRLEEGHRQ-YLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEA 101
+++ Q AE QGF+R E RQ L + + + R QA A + +A
Sbjct: 2319 EQMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQA 2378
Query: 102 ELGGPRRQPLLAGHVRSLQELEQTRLGT---VALLQLMETPELAGQEDAVRMQQLKMKVI 158
E G ++L +T L T V L+Q +E DA R+++ ++
Sbjct: 2379 EEIG--------------EKLHRTELATQEKVTLVQTLEIQRQQSDHDAERLREAIAELE 2424
Query: 159 KTMEAISEVLQDLRFDAESAE 179
+ E + + + L+ +E +
Sbjct: 2425 REKEKLQQEAKLLQLKSEEMQ 2445
Score = 27.7 bits (60), Expect = 5.5
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 44 RIHQLQAERAQGFRRLEEGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAEL 103
R QL AE + R EE ++ L + + + AR R AA EV ++A++
Sbjct: 1939 RQRQLAAEEERRRREAEERVQKSLAA--EEEAARQRK----------AALEEVERLKAKV 1986
Query: 104 GGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEA 163
RR +R E E R +A + + + A +QQ + ++ +T++
Sbjct: 1987 EEARR-------LRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ 2039
Query: 164 ISEVLQDLRFDAESA 178
VL LR +AE+A
Sbjct: 2040 EQSVLDQLRGEAEAA 2054
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 30.0 bits (66), Expect = 1.1
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 43 QRIHQLQAERAQGFRRLEEGHRQ-YLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEA 101
+++ Q AE QGF+R E RQ L + + + R QA A + +A
Sbjct: 2488 EQMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQA 2547
Query: 102 ELGGPRRQPLLAGHVRSLQELEQTRLGT---VALLQLMETPELAGQEDAVRMQQLKMKVI 158
E G ++L +T L T V L+Q +E DA R+++ ++
Sbjct: 2548 EEIG--------------EKLHRTELATQEKVTLVQTLEIQRQQSDHDAERLREAIAELE 2593
Query: 159 KTMEAISEVLQDLRFDAESAE 179
+ E + + + L+ +E +
Sbjct: 2594 REKEKLQQEAKLLQLKSEEMQ 2614
Score = 27.7 bits (60), Expect = 5.5
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 44 RIHQLQAERAQGFRRLEEGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAEL 103
R QL AE + R EE ++ L + + + AR R AA EV ++A++
Sbjct: 2108 RQRQLAAEEERRRREAEERVQKSLAA--EEEAARQRK----------AALEEVERLKAKV 2155
Query: 104 GGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEA 163
RR +R E E R +A + + + A +QQ + ++ +T++
Sbjct: 2156 EEARR-------LRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ 2208
Query: 164 ISEVLQDLRFDAESA 178
VL LR +AE+A
Sbjct: 2209 EQSVLDQLRGEAEAA 2223
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 30.0 bits (66), Expect = 1.1
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 43 QRIHQLQAERAQGFRRLEEGHRQ-YLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEA 101
+++ Q AE QGF+R E RQ L + + + R QA A + +A
Sbjct: 2329 EQMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQA 2388
Query: 102 ELGGPRRQPLLAGHVRSLQELEQTRLGT---VALLQLMETPELAGQEDAVRMQQLKMKVI 158
E G ++L +T L T V L+Q +E DA R+++ ++
Sbjct: 2389 EEIG--------------EKLHRTELATQEKVTLVQTLEIQRQQSDHDAERLREAIAELE 2434
Query: 159 KTMEAISEVLQDLRFDAESAE 179
+ E + + + L+ +E +
Sbjct: 2435 REKEKLQQEAKLLQLKSEEMQ 2455
Score = 27.7 bits (60), Expect = 5.5
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 44 RIHQLQAERAQGFRRLEEGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAEL 103
R QL AE + R EE ++ L + + + AR R AA EV ++A++
Sbjct: 1949 RQRQLAAEEERRRREAEERVQKSLAA--EEEAARQRK----------AALEEVERLKAKV 1996
Query: 104 GGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEA 163
RR +R E E R +A + + + A +QQ + ++ +T++
Sbjct: 1997 EEARR-------LRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ 2049
Query: 164 ISEVLQDLRFDAESA 178
VL LR +AE+A
Sbjct: 2050 EQSVLDQLRGEAEAA 2064
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 30.0 bits (66), Expect = 1.1
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 43 QRIHQLQAERAQGFRRLEEGHRQ-YLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEA 101
+++ Q AE QGF+R E RQ L + + + R QA A + +A
Sbjct: 2337 EQMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQA 2396
Query: 102 ELGGPRRQPLLAGHVRSLQELEQTRLGT---VALLQLMETPELAGQEDAVRMQQLKMKVI 158
E G ++L +T L T V L+Q +E DA R+++ ++
Sbjct: 2397 EEIG--------------EKLHRTELATQEKVTLVQTLEIQRQQSDHDAERLREAIAELE 2442
Query: 159 KTMEAISEVLQDLRFDAESAE 179
+ E + + + L+ +E +
Sbjct: 2443 REKEKLQQEAKLLQLKSEEMQ 2463
Score = 27.7 bits (60), Expect = 5.5
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 44 RIHQLQAERAQGFRRLEEGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAEL 103
R QL AE + R EE ++ L + + + AR R AA EV ++A++
Sbjct: 1957 RQRQLAAEEERRRREAEERVQKSLAA--EEEAARQRK----------AALEEVERLKAKV 2004
Query: 104 GGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEA 163
RR +R E E R +A + + + A +QQ + ++ +T++
Sbjct: 2005 EEARR-------LRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ 2057
Query: 164 ISEVLQDLRFDAESA 178
VL LR +AE+A
Sbjct: 2058 EQSVLDQLRGEAEAA 2072
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 30.0 bits (66), Expect = 1.1
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 18/141 (12%)
Query: 43 QRIHQLQAERAQGFRRLEEGHRQ-YLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEA 101
+++ Q AE QGF+R E RQ L + + + R QA A + +A
Sbjct: 2378 EQMAQQLAEETQGFQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQA 2437
Query: 102 ELGGPRRQPLLAGHVRSLQELEQTRLGT---VALLQLMETPELAGQEDAVRMQQLKMKVI 158
E G ++L +T L T V L+Q +E DA R+++ ++
Sbjct: 2438 EEIG--------------EKLHRTELATQEKVTLVQTLEIQRQQSDHDAERLREAIAELE 2483
Query: 159 KTMEAISEVLQDLRFDAESAE 179
+ E + + + L+ +E +
Sbjct: 2484 REKEKLQQEAKLLQLKSEEMQ 2504
Score = 27.7 bits (60), Expect = 5.5
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 44 RIHQLQAERAQGFRRLEEGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAEL 103
R QL AE + R EE ++ L + + + AR R AA EV ++A++
Sbjct: 1998 RQRQLAAEEERRRREAEERVQKSLAA--EEEAARQRK----------AALEEVERLKAKV 2045
Query: 104 GGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQLKMKVIKTMEA 163
RR +R E E R +A + + + A +QQ + ++ +T++
Sbjct: 2046 EEARR-------LRERAEQESARQLQLAQEAAQKRLQAEEKAHAFAVQQKEQELQQTLQQ 2098
Query: 164 ISEVLQDLRFDAESA 178
VL LR +AE+A
Sbjct: 2099 EQSVLDQLRGEAEAA 2113
>gi|93141029 paralemmin isoform 2 [Homo sapiens]
Length = 343
Score = 29.6 bits (65), Expect = 1.4
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 1 MITETAAEPTVPAVP---AAEEATEARGREE 28
++ E AAEP PA P AAE TEA REE
Sbjct: 285 VVIEDAAEPKEPAPPNGSAAEPPTEAASREE 315
>gi|93141031 paralemmin isoform 1 [Homo sapiens]
Length = 387
Score = 29.6 bits (65), Expect = 1.4
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 1 MITETAAEPTVPAVP---AAEEATEARGREE 28
++ E AAEP PA P AAE TEA REE
Sbjct: 329 VVIEDAAEPKEPAPPNGSAAEPPTEAASREE 359
>gi|239750255 PREDICTED: similar to ovostatin-2 [Homo sapiens]
Length = 750
Score = 29.3 bits (64), Expect = 1.9
Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 13/125 (10%)
Query: 10 TVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLEEGHRQYLRS 69
TV A A G E+ WKD +++ + ++ ER Q F EG + +
Sbjct: 503 TVVAESKQSSACPNEGMEQQKLNWKDTVVKSFLVEPEGIEKERTQSFLICTEGAKASKQG 562
Query: 70 GPDYDFARYRSTVHGVTQAFAAASREVLAVEAEL---------GGPRRQPLLAGHVRSLQ 120
D V G + F ++L + + GG + LLA L
Sbjct: 563 VLDLP----NDVVEGSARGFFTVVGDILGLAMQNLVVLQMPYGGGEQNAALLASDTYVLD 618
Query: 121 ELEQT 125
L+ T
Sbjct: 619 YLKST 623
>gi|239744583 PREDICTED: ovostatin 2 [Homo sapiens]
Length = 1394
Score = 29.3 bits (64), Expect = 1.9
Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 13/125 (10%)
Query: 10 TVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLEEGHRQYLRS 69
TV A A G E+ WKD +++ + ++ ER Q F EG + +
Sbjct: 860 TVVAESKQSSACPNEGMEQQKLNWKDTVVKSFLVEPEGIEKERTQSFLICTEGAKASKQG 919
Query: 70 GPDYDFARYRSTVHGVTQAFAAASREVLAVEAEL---------GGPRRQPLLAGHVRSLQ 120
D V G + F ++L + + GG + LLA L
Sbjct: 920 VLDLP----NDVVEGSARGFFTVVGDILGLAMQNLVVLQMPYGGGEQNAALLASDTYVLD 975
Query: 121 ELEQT 125
L+ T
Sbjct: 976 YLKST 980
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 28.5 bits (62), Expect = 3.2
Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 10/136 (7%)
Query: 12 PAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLEEGHRQYLRSGP 71
PA PA A+ + G + R L+++ QL +AQ R E + P
Sbjct: 86 PATPATLSASSSAGGSRTPAMSSSSSSRVLLRQ--QLMRAQAQEQERRERREQAAAAPFP 143
Query: 72 DYDFARYRSTVHGVTQAF--------AAASREVLAVEAELGGPRRQPLLAGHVRSLQELE 123
A +V GV+ A REVL V+ L P R L + +++
Sbjct: 144 SPAPASPAISVVGVSAGGHTLSRPPPAQVPREVLKVQTHLENPTRYHLQQARRQQVKQYL 203
Query: 124 QTRLGTVALLQLMETP 139
T LG Q + P
Sbjct: 204 STTLGPKLASQALTPP 219
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 28.5 bits (62), Expect = 3.2
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 25/140 (17%)
Query: 8 EPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLEEGHRQYL 67
EP V ++P A + + EE P +D P+ + ++QAE + EEG +
Sbjct: 1190 EPIV-SIPKAGRKPKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEA----EEGEEEDA 1244
Query: 68 RSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAELGGPRRQPLLAGHVRSLQELEQTRL 127
S S V + A ++ S E E E+ +P ++ R +E +Q
Sbjct: 1245 AS----------SEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQE-- 1292
Query: 128 GTVALLQLMETPELAGQEDA 147
+E PE +EDA
Sbjct: 1293 --------LEEPEPEEEEDA 1304
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 28.5 bits (62), Expect = 3.2
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 25/140 (17%)
Query: 8 EPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLEEGHRQYL 67
EP V ++P A + + EE P +D P+ + ++QAE + EEG +
Sbjct: 1190 EPIV-SIPKAGRKPKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEA----EEGEEEDA 1244
Query: 68 RSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAELGGPRRQPLLAGHVRSLQELEQTRL 127
S S V + A ++ S E E E+ +P ++ R +E +Q
Sbjct: 1245 AS----------SEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQE-- 1292
Query: 128 GTVALLQLMETPELAGQEDA 147
+E PE +EDA
Sbjct: 1293 --------LEEPEPEEEEDA 1304
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 28.5 bits (62), Expect = 3.2
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 25/140 (17%)
Query: 8 EPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLEEGHRQYL 67
EP V ++P A + + EE P +D P+ + ++QAE + EEG +
Sbjct: 1190 EPIV-SIPKAGRKPKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEA----EEGEEEDA 1244
Query: 68 RSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAELGGPRRQPLLAGHVRSLQELEQTRL 127
S S V + A ++ S E E E+ +P ++ R +E +Q
Sbjct: 1245 AS----------SEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQE-- 1292
Query: 128 GTVALLQLMETPELAGQEDA 147
+E PE +EDA
Sbjct: 1293 --------LEEPEPEEEEDA 1304
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 28.1 bits (61), Expect = 4.2
Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 11/115 (9%)
Query: 2 ITETAAEPTVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAE---------- 51
+ E E P + A E + R A W+DA R +R +L+AE
Sbjct: 269 LLEEEGEGQEPPLEAERAPREEQQRSLEAPGWEDAERREREER-ERLEAEEERRRLQAQA 327
Query: 52 RAQGFRRLEEGHRQYLRSGPDYDFARYRSTVHGVTQAFAAASREVLAVEAELGGP 106
+A+ RRLEE R R + + R + + A E+ EAE+ GP
Sbjct: 328 QAEERRRLEEDARLEERRRQEEEEGRCAEELKRQEEEEAEGWEELEQQEAEVQGP 382
>gi|32698866 spindle pole body component 24 homolog [Homo sapiens]
Length = 197
Score = 28.1 bits (61), Expect = 4.2
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 94 REVLAVEAELGGPRRQPLLAGHVRSLQELEQTRLGTVALLQLMETPELAGQEDAVRMQQL 153
RE+L +E E+ Q LL EQ G V L QL + AG+ED R++
Sbjct: 53 REILTMEKEVA----QSLLNAK-------EQVHQGGVELQQLEAGLQEAGEED-TRLKAS 100
Query: 154 KMKVIKTMEAISEVLQDL 171
+++ + +E + E+ DL
Sbjct: 101 LLQLTRELEELKEIEADL 118
>gi|116488398 keratin 32 [Homo sapiens]
Length = 448
Score = 27.7 bits (60), Expect = 5.5
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 25 GREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLEE-GHRQYLRSGPDY 73
G E+ + + + + + R+ QL+ E A+ R++E H Q L PDY
Sbjct: 94 GNEKETMQFLNDRLASYLTRVRQLEQENAELESRIQEASHSQVLTMTPDY 143
>gi|239747341 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 27.3 bits (59), Expect = 7.2
Identities = 35/134 (26%), Positives = 49/134 (36%), Gaps = 30/134 (22%)
Query: 30 AWP--WKDAPIRTLVQRIHQLQAERAQGFRRLEEGHRQYLRSGPDYDFARYRSTVHGVTQ 87
AWP D P R LV+ H +RA G +++ R R V VT+
Sbjct: 20 AWPPTHTDVPARVLVRARHLRSRDRAAGPYAVDQAER---------GARRPCQAVELVTE 70
Query: 88 AFAAASR----EVLAVEAELGGPRR---QPLLAGHVR------------SLQELEQTRLG 128
F R V+A +A G + Q LL G + + + + LG
Sbjct: 71 TFDVVKRVQDDHVVATQAPFHGGSQSSTQCLLTGRIAVHRWVLCAQDSCVVHHVHRAALG 130
Query: 129 TVALLQLMETPELA 142
+ QL TP LA
Sbjct: 131 SQRHAQLFSTPALA 144
>gi|169204289 PREDICTED: ovostatin [Homo sapiens]
Length = 1353
Score = 27.3 bits (59), Expect = 7.2
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 10 TVPAVPAAEEATEARGREEPAWPWKDAPIRTLVQRIHQLQAERAQGFRRLEEG 62
TV A A G E+ WKD +++ + ++ ER Q F EG
Sbjct: 811 TVVAESKQSSACPNEGMEQQKLNWKDTVVQSFLVEPEGIEKERTQSFLICTEG 863
>gi|239741166 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 27.3 bits (59), Expect = 7.2
Identities = 35/134 (26%), Positives = 49/134 (36%), Gaps = 30/134 (22%)
Query: 30 AWP--WKDAPIRTLVQRIHQLQAERAQGFRRLEEGHRQYLRSGPDYDFARYRSTVHGVTQ 87
AWP D P R LV+ H +RA G +++ R R V VT+
Sbjct: 20 AWPPTHTDVPARVLVRARHLRSRDRAAGPYAVDQAER---------GARRPCQAVELVTE 70
Query: 88 AFAAASR----EVLAVEAELGGPRR---QPLLAGHVR------------SLQELEQTRLG 128
F R V+A +A G + Q LL G + + + + LG
Sbjct: 71 TFDVVKRVQDDHVVATQAPFHGGSQSSTQCLLTGRIAVHRWVLCAQDSCVVHHVHRAALG 130
Query: 129 TVALLQLMETPELA 142
+ QL TP LA
Sbjct: 131 SQRHAQLFSTPALA 144
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.129 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,078,662
Number of Sequences: 37866
Number of extensions: 242996
Number of successful extensions: 1167
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1136
Number of HSP's gapped (non-prelim): 72
length of query: 179
length of database: 18,247,518
effective HSP length: 96
effective length of query: 83
effective length of database: 14,612,382
effective search space: 1212827706
effective search space used: 1212827706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.