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Search of human proteins with 153945852
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153945852 G7c protein [Homo sapiens]
(891 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153945852 G7c protein [Homo sapiens] 1801 0.0
gi|118572606 hemicentin 1 [Homo sapiens] 135 2e-31
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 121 3e-27
gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo ... 121 3e-27
gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens] 57 1e-07
gi|28395049 mitochondrial COX18 [Homo sapiens] 38 0.037
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 37 0.063
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 37 0.063
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 37 0.063
gi|239753487 PREDICTED: hypothetical protein [Homo sapiens] 37 0.082
gi|239748063 PREDICTED: hypothetical protein [Homo sapiens] 37 0.082
gi|239741956 PREDICTED: hypothetical protein XP_002342400 [Homo ... 37 0.082
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 36 0.14
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 35 0.24
gi|7662346 ADNP homeobox 2 [Homo sapiens] 35 0.24
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact... 35 0.31
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 35 0.31
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 35 0.31
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 35 0.31
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 35 0.31
gi|61742782 leucine rich repeat and death domain containing prot... 35 0.41
gi|116284392 mucin 2 precursor [Homo sapiens] 34 0.53
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 34 0.69
gi|33457316 pleckstrin homology domain containing, family O memb... 33 0.90
gi|24308241 zinc finger and BTB domain containing 2 [Homo sapiens] 33 0.90
gi|169205253 PREDICTED: hypothetical protein [Homo sapiens] 33 1.2
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 33 1.5
gi|215422388 death-domain associated protein isoform a [Homo sap... 33 1.5
gi|215422366 death-domain associated protein isoform b [Homo sap... 33 1.5
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 33 1.5
>gi|153945852 G7c protein [Homo sapiens]
Length = 891
Score = 1801 bits (4666), Expect = 0.0
Identities = 891/891 (100%), Positives = 891/891 (100%)
Query: 1 MLPTEVPQSHPGPSALLLLQLLLPPTSAFFPNIWSLLAAPGSITHQDLTEEAALNVTLQL 60
MLPTEVPQSHPGPSALLLLQLLLPPTSAFFPNIWSLLAAPGSITHQDLTEEAALNVTLQL
Sbjct: 1 MLPTEVPQSHPGPSALLLLQLLLPPTSAFFPNIWSLLAAPGSITHQDLTEEAALNVTLQL 60
Query: 61 FLEQPPPGRPPLRLEDFLGRTLLADDLFAAYFGPGSSRRFRAALGEVSRANAAQDFLPTS 120
FLEQPPPGRPPLRLEDFLGRTLLADDLFAAYFGPGSSRRFRAALGEVSRANAAQDFLPTS
Sbjct: 61 FLEQPPPGRPPLRLEDFLGRTLLADDLFAAYFGPGSSRRFRAALGEVSRANAAQDFLPTS 120
Query: 121 RNDPDLHFDAERLGQGRARLVGALRETVVAARALDHTLARQRLGAALHALQDFYSHSNWV 180
RNDPDLHFDAERLGQGRARLVGALRETVVAARALDHTLARQRLGAALHALQDFYSHSNWV
Sbjct: 121 RNDPDLHFDAERLGQGRARLVGALRETVVAARALDHTLARQRLGAALHALQDFYSHSNWV 180
Query: 181 ELGEQQPHPHLLWPRQELQNLAQVADPTCSDCEELSCPRNWLGFTLLTSGYFGTHPPKPP 240
ELGEQQPHPHLLWPRQELQNLAQVADPTCSDCEELSCPRNWLGFTLLTSGYFGTHPPKPP
Sbjct: 181 ELGEQQPHPHLLWPRQELQNLAQVADPTCSDCEELSCPRNWLGFTLLTSGYFGTHPPKPP 240
Query: 241 GKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALLASIQAFSLLRSRLG 300
GKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALLASIQAFSLLRSRLG
Sbjct: 241 GKCSHGGHFDRSSSQPPRGGINKDSTSPGFSPHHMLHLQAAKLALLASIQAFSLLRSRLG 300
Query: 301 DRDFSRLLDITPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPVHYVLVPFH 360
DRDFSRLLDITPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPVHYVLVPFH
Sbjct: 301 DRDFSRLLDITPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPVHYVLVPFH 360
Query: 361 DPGFGPVFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASP 420
DPGFGPVFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASP
Sbjct: 361 DPGFGPVFTTSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASP 420
Query: 421 KDAFLTNQVESLTQERRCRVTFLVTEDTSRVQGRARREILSPLRFEPYKAVALASGGEVI 480
KDAFLTNQVESLTQERRCRVTFLVTEDTSRVQGRARREILSPLRFEPYKAVALASGGEVI
Sbjct: 421 KDAFLTNQVESLTQERRCRVTFLVTEDTSRVQGRARREILSPLRFEPYKAVALASGGEVI 480
Query: 481 FTKDQHIRDVAAIVGESMAALVTLPLDPPVVVPGQPLVFSVDGLLQKITVRIHGDISSFW 540
FTKDQHIRDVAAIVGESMAALVTLPLDPPVVVPGQPLVFSVDGLLQKITVRIHGDISSFW
Sbjct: 481 FTKDQHIRDVAAIVGESMAALVTLPLDPPVVVPGQPLVFSVDGLLQKITVRIHGDISSFW 540
Query: 541 IKNPAGVSQGQEEGGGPLGHTRRFGQFWMVTMDDPPQTGTWEIQVTAEDTPGVRVQAQTS 600
IKNPAGVSQGQEEGGGPLGHTRRFGQFWMVTMDDPPQTGTWEIQVTAEDTPGVRVQAQTS
Sbjct: 541 IKNPAGVSQGQEEGGGPLGHTRRFGQFWMVTMDDPPQTGTWEIQVTAEDTPGVRVQAQTS 600
Query: 601 LDFLFHFGIPMEDGPHPGLYPLTQPVAGLQTQLLVEVTGLGSRANPGDPQPHFSHVILRG 660
LDFLFHFGIPMEDGPHPGLYPLTQPVAGLQTQLLVEVTGLGSRANPGDPQPHFSHVILRG
Sbjct: 601 LDFLFHFGIPMEDGPHPGLYPLTQPVAGLQTQLLVEVTGLGSRANPGDPQPHFSHVILRG 660
Query: 661 VPEGAELGQVPLEPVGPPERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHRAAPQPS 720
VPEGAELGQVPLEPVGPPERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHRAAPQPS
Sbjct: 661 VPEGAELGQVPLEPVGPPERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHRAAPQPS 720
Query: 721 TVVPVLLELSGPSGFLAPGSKVPLSLRIASFSGPQDLDLRTFVNPSFSLTSNLSRAHLEL 780
TVVPVLLELSGPSGFLAPGSKVPLSLRIASFSGPQDLDLRTFVNPSFSLTSNLSRAHLEL
Sbjct: 721 TVVPVLLELSGPSGFLAPGSKVPLSLRIASFSGPQDLDLRTFVNPSFSLTSNLSRAHLEL 780
Query: 781 NESAWGRLWLEVPDSAAPDSVVMVTVTAGGREANPVPPTHAFLRLLVSAPAPQDRHTTPT 840
NESAWGRLWLEVPDSAAPDSVVMVTVTAGGREANPVPPTHAFLRLLVSAPAPQDRHTTPT
Sbjct: 781 NESAWGRLWLEVPDSAAPDSVVMVTVTAGGREANPVPPTHAFLRLLVSAPAPQDRHTTPT 840
Query: 841 GSSDPILTTATPAFSPFTLVTQGRAGAGLAAGSPWWGTVGGVLLLLGLASW 891
GSSDPILTTATPAFSPFTLVTQGRAGAGLAAGSPWWGTVGGVLLLLGLASW
Sbjct: 841 GSSDPILTTATPAFSPFTLVTQGRAGAGLAAGSPWWGTVGGVLLLLGLASW 891
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 135 bits (339), Expect = 2e-31
Identities = 103/339 (30%), Positives = 171/339 (50%), Gaps = 27/339 (7%)
Query: 313 ASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPV-HYVLVPFHDPGFGPVFTTS 371
AS+L+FV D TGSM +++ A ++E P P+ ++ LVPFHDP GPV T+
Sbjct: 39 ASTLAFVFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLFNFALVPFHDPEIGPVTITT 98
Query: 372 DPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLTNQVES 431
DP F +L E++ GGGD PEM + A+++AL + P S I+VFTDA KD LT++V
Sbjct: 99 DPKKFQYELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYRLTHEVLQ 158
Query: 432 LTQERRCRVTFLVTEDTSRVQGRARREILSPLRFEPYKAVALASGGEVIFTKDQHIRDVA 491
L Q+++ +V F++T D + + + ++ Y+ +A S G+V + + +V
Sbjct: 159 LIQQKQSQVVFVLTGDC---------DDRTHIGYKVYEEIASTSSGQVFHLDKKQVNEVL 209
Query: 492 AIVGESMAA-----LVTLPLDPPVVVPGQPLVFSVDGLLQKITVRIHGDISSFWIKNPAG 546
V E++ A L T L+ V P D L+++TV + G I+NP G
Sbjct: 210 KWVEEAVQASKVHLLSTDHLEQAVNTWRIPF----DPSLKEVTVSLSGPSPMIEIRNPLG 265
Query: 547 VSQGQEEGGGPLGHTRRFGQFWMVTMDDPPQTGTWEIQVTAEDTPGVRVQAQTSLDFLFH 606
+ ++G G L V P+ G W ++ ++ VR+ +++DF
Sbjct: 266 --KLIKKGFG-LHELLNIHNSAKVVNVKEPEAGMWTVKTSSSGRHSVRITGLSTIDFRAG 322
Query: 607 FG-IPMEDGPHPGLYPLTQPVAGLQTQLLVEVTGLGSRA 644
F P D +++PV G+ T +L+ +G+ + A
Sbjct: 323 FSRKPTLDFKK----TVSRPVQGIPTYVLLNTSGISTPA 357
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 121 bits (304), Expect = 3e-27
Identities = 96/333 (28%), Positives = 155/333 (46%), Gaps = 19/333 (5%)
Query: 311 TPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPV-HYVLVPFHDPGFGPVFT 369
T ++L+FV D TGSM +E+ A ++E+ + + +Y LVPFHDP GPV
Sbjct: 34 TGDATLAFVFDVTGSMWDELMQVIDGASRILERSLSRRSQAIANYALVPFHDPDIGPVTL 93
Query: 370 TSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLTNQV 429
T+DP F ++L E++ GGGD PEM + A++ A+ P S I+VF+DA KD ++
Sbjct: 94 TADPTVFQRELRELYVQGGGDCPEMSVGAIKAAVEVANPGSFIYVFSDARAKDYHKKEEL 153
Query: 430 ESLTQERRCRVTFLVTEDTSRVQGRARREILSPLRFEPYKAVALASGGEVIFTKDQHIRD 489
L Q ++ +V F++T D R L+ Y+ +A S G+V Q + +
Sbjct: 154 LRLLQLKQSQVVFVLTGDCG---DRTHPGYLA------YEEIAATSSGQVFHLDKQQVTE 204
Query: 490 VAAIVGESMAALVTLPLDPPVVVPGQ-PLVFSVDGLLQKITVRIHGDISSFWIKNPAGVS 548
V V ++ A L G+ D L+++T+ + G +++P G
Sbjct: 205 VLKWVESAIQASKVHLLSTDHEEEGEHTWRLPFDPSLKEVTISLSGPGPEIEVQDPLGRI 264
Query: 549 QGQEEGGGPLGHTRRFGQFWMVTMDDPPQTGTWEIQVTAEDTPGVRVQAQTSLDFLFHFG 608
++EG L V P G W I+V + VR+ +++DF F
Sbjct: 265 LQEDEG---LNVLLNIPDSAKVVAFKPEHPGLWSIKVYSSGRHSVRITGVSNIDFRAGFS 321
Query: 609 I-PMEDGPHPGLYPLTQPVAGLQTQLLVEVTGL 640
P+ D H L P+ G+ L++ TGL
Sbjct: 322 TQPLLDLNH----TLEWPLQGVPISLVINSTGL 350
>gi|239743951 PREDICTED: hypothetical protein XP_002342997 [Homo
sapiens]
Length = 790
Score = 121 bits (304), Expect = 3e-27
Identities = 96/333 (28%), Positives = 155/333 (46%), Gaps = 19/333 (5%)
Query: 311 TPASSLSFVLDTTGSMGEEINAAKIQARHLVEQRRGSPMEPV-HYVLVPFHDPGFGPVFT 369
T ++L+FV D TGSM +E+ A ++E+ + + +Y LVPFHDP GPV
Sbjct: 33 TGDATLAFVFDVTGSMWDELMQVIDGASRILERSLSRRSQAIANYALVPFHDPDIGPVTL 92
Query: 370 TSDPDSFWQQLNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLTNQV 429
T+DP F ++L E++ GGGD PEM + A++ A+ P S I+VF+DA KD ++
Sbjct: 93 TADPTVFQRELRELYVQGGGDCPEMSVGAIKAAVEVANPGSFIYVFSDARAKDYHKKEEL 152
Query: 430 ESLTQERRCRVTFLVTEDTSRVQGRARREILSPLRFEPYKAVALASGGEVIFTKDQHIRD 489
L Q ++ +V F++T D R L+ Y+ +A S G+V Q + +
Sbjct: 153 LRLLQLKQSQVVFVLTGDCG---DRTHPGYLA------YEEIAATSSGQVFHLDKQQVTE 203
Query: 490 VAAIVGESMAALVTLPLDPPVVVPGQ-PLVFSVDGLLQKITVRIHGDISSFWIKNPAGVS 548
V V ++ A L G+ D L+++T+ + G +++P G
Sbjct: 204 VLKWVESAIQASKVHLLSTDHEEEGEHTWRLPFDPSLKEVTISLSGPGPEIEVQDPLGRI 263
Query: 549 QGQEEGGGPLGHTRRFGQFWMVTMDDPPQTGTWEIQVTAEDTPGVRVQAQTSLDFLFHFG 608
++EG L V P G W I+V + VR+ +++DF F
Sbjct: 264 LQEDEG---LNVLLNIPDSAKVVAFKPEHPGLWSIKVYSSGRHSVRITGVSNIDFRAGFS 320
Query: 609 I-PMEDGPHPGLYPLTQPVAGLQTQLLVEVTGL 640
P+ D H L P+ G+ L++ TGL
Sbjct: 321 TQPLLDLNH----TLEWPLQGVPISLVINSTGL 349
>gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens]
Length = 1215
Score = 56.6 bits (135), Expect = 1e-07
Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 18/249 (7%)
Query: 394 MCLSALQLALLHTPPLSDIFVFTDASPKDAFLTNQVESLTQERRCRVTFLVTEDTSRVQG 453
M + A++ A+ P S I+VF+DA KD ++ L Q ++ +V F++T D
Sbjct: 1 MSVGAIKAAVEVANPGSFIYVFSDARAKDYHKKEELLRLLQLKQSQVVFVLTGDCG---- 56
Query: 454 RARREILSPLRFEPYKAVALASGGEVIFTKDQHIRDVAAIVGESMAALVTLPLDPPVVVP 513
+ P + Y+ +A S G+V Q + +V V ++ A L
Sbjct: 57 ----DHTHP-GYLAYEEIAATSSGQVFHLDKQQVTEVLKWVESAIQASKVHLLSTDHEEE 111
Query: 514 GQ-PLVFSVDGLLQKITVRIHGDISSFWIKNPAGVSQGQEEGGGPLGHTRRFGQFWMVTM 572
G+ D L+++T+ + G +++P G ++EG L V
Sbjct: 112 GEHTWRLPFDPSLKEVTISLSGPGPEIEVQDPLGRILQEDEG---LNVLLNIPDSAKVVA 168
Query: 573 DDPPQTGTWEIQVTAEDTPGVRVQAQTSLDFLFHFGI-PMEDGPHPGLYPLTQPVAGLQT 631
P G W I+V + VR+ +++DF F P+ D H L P+ G+
Sbjct: 169 FKPEHPGLWSIKVYSSGRHSVRITGVSNIDFRAGFSTQPLLDLNH----TLEWPLQGVPI 224
Query: 632 QLLVEVTGL 640
L++ TGL
Sbjct: 225 SLVINSTGL 233
>gi|28395049 mitochondrial COX18 [Homo sapiens]
Length = 333
Score = 38.1 bits (87), Expect = 0.037
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
Query: 809 GGREANPVPPTHAFLRLLVSAPAPQD---RHTTPTGSSDPILTT-------ATPAFSPFT 858
GGR P+P + R L AP P R T P + P+ A A SP
Sbjct: 6 GGRWLRPLPALQLWARDLPLAPVPTSGAKRPTLPVWAVAPVSAVHANGWYEALAASSPVR 65
Query: 859 LVTQGRAGAGLAAGSPWWGTV 879
+ + G A G PWWG++
Sbjct: 66 VAEEVLLGVHAATGLPWWGSI 86
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 37.4 bits (85), Expect = 0.063
Identities = 71/287 (24%), Positives = 94/287 (32%), Gaps = 47/287 (16%)
Query: 610 PMEDGPHPGLYPLT----QPVAGLQTQLLVEVTGLGS---------RANPGDPQPHFSHV 656
P PHP L PLT QP A Q + G +PG PQP
Sbjct: 263 PPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF---- 318
Query: 657 ILRGVPEGAELGQVPL--EPVGPPERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHR 714
G+P A GQ PL P L S + L + +P + + A +
Sbjct: 319 ---GLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPL--PPAPLAMPH 373
Query: 715 AAPQPSTVVPVLLELSGPSGFLAPGSKVPLSLRIASFSGPQDLDLRTFVNPSFSL--TSN 772
P P+T +P +L P P SGP + + P +L S+
Sbjct: 374 IKPPPTTPIP---QLPAPQAHKHP----------PHLSGPSPFSMNANLPPPPALKPLSS 420
Query: 773 LSRAHLELNESAWGRLWLEVPDSAAPDSVVMVTVTAGGREANPVPPTHAFLRLLVSAPAP 832
LS H L L P S + P P +H L AP P
Sbjct: 421 LSTHHPPSAHPP--PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 478
Query: 833 Q-DRHTTPTGSSDPIL-----TTATPAFSPFTLVTQGRAGAGLAAGS 873
+H G PI +T+TP P T +GA + GS
Sbjct: 479 PFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGS 525
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 37.4 bits (85), Expect = 0.063
Identities = 71/287 (24%), Positives = 94/287 (32%), Gaps = 47/287 (16%)
Query: 610 PMEDGPHPGLYPLT----QPVAGLQTQLLVEVTGLGS---------RANPGDPQPHFSHV 656
P PHP L PLT QP A Q + G +PG PQP
Sbjct: 817 PPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF---- 872
Query: 657 ILRGVPEGAELGQVPL--EPVGPPERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHR 714
G+P A GQ PL P L S + L + +P + + A +
Sbjct: 873 ---GLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPL--PPAPLAMPH 927
Query: 715 AAPQPSTVVPVLLELSGPSGFLAPGSKVPLSLRIASFSGPQDLDLRTFVNPSFSL--TSN 772
P P+T +P +L P P SGP + + P +L S+
Sbjct: 928 IKPPPTTPIP---QLPAPQAHKHP----------PHLSGPSPFSMNANLPPPPALKPLSS 974
Query: 773 LSRAHLELNESAWGRLWLEVPDSAAPDSVVMVTVTAGGREANPVPPTHAFLRLLVSAPAP 832
LS H L L P S + P P +H L AP P
Sbjct: 975 LSTHHPPSAHPP--PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 1032
Query: 833 Q-DRHTTPTGSSDPIL-----TTATPAFSPFTLVTQGRAGAGLAAGS 873
+H G PI +T+TP P T +GA + GS
Sbjct: 1033 PFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGS 1079
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 37.4 bits (85), Expect = 0.063
Identities = 71/287 (24%), Positives = 94/287 (32%), Gaps = 47/287 (16%)
Query: 610 PMEDGPHPGLYPLT----QPVAGLQTQLLVEVTGLGS---------RANPGDPQPHFSHV 656
P PHP L PLT QP A Q + G +PG PQP
Sbjct: 817 PPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF---- 872
Query: 657 ILRGVPEGAELGQVPL--EPVGPPERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHR 714
G+P A GQ PL P L S + L + +P + + A +
Sbjct: 873 ---GLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPL--PPAPLAMPH 927
Query: 715 AAPQPSTVVPVLLELSGPSGFLAPGSKVPLSLRIASFSGPQDLDLRTFVNPSFSL--TSN 772
P P+T +P +L P P SGP + + P +L S+
Sbjct: 928 IKPPPTTPIP---QLPAPQAHKHP----------PHLSGPSPFSMNANLPPPPALKPLSS 974
Query: 773 LSRAHLELNESAWGRLWLEVPDSAAPDSVVMVTVTAGGREANPVPPTHAFLRLLVSAPAP 832
LS H L L P S + P P +H L AP P
Sbjct: 975 LSTHHPPSAHPP--PLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQP 1032
Query: 833 Q-DRHTTPTGSSDPIL-----TTATPAFSPFTLVTQGRAGAGLAAGS 873
+H G PI +T+TP P T +GA + GS
Sbjct: 1033 PFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGS 1079
>gi|239753487 PREDICTED: hypothetical protein [Homo sapiens]
Length = 163
Score = 37.0 bits (84), Expect = 0.082
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 815 PVPPTHAFLRLLVSAPAPQDRHTTPTGSSDPILTTATPAFSPFTLVTQGRAGAGLAAGSP 874
P PTH L ++ + PA Q RHTT T + P + P + + Q G GLA +
Sbjct: 73 PRTPTH--LIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRGKGVGLAK-AM 129
Query: 875 WWGTVG 880
WW + G
Sbjct: 130 WWTSWG 135
>gi|239748063 PREDICTED: hypothetical protein [Homo sapiens]
Length = 163
Score = 37.0 bits (84), Expect = 0.082
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 815 PVPPTHAFLRLLVSAPAPQDRHTTPTGSSDPILTTATPAFSPFTLVTQGRAGAGLAAGSP 874
P PTH L ++ + PA Q RHTT T + P + P + + Q G GLA +
Sbjct: 73 PRTPTH--LIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRGKGVGLAK-AM 129
Query: 875 WWGTVG 880
WW + G
Sbjct: 130 WWTSWG 135
>gi|239741956 PREDICTED: hypothetical protein XP_002342400 [Homo
sapiens]
Length = 163
Score = 37.0 bits (84), Expect = 0.082
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 815 PVPPTHAFLRLLVSAPAPQDRHTTPTGSSDPILTTATPAFSPFTLVTQGRAGAGLAAGSP 874
P PTH L ++ + PA Q RHTT T + P + P + + Q G GLA +
Sbjct: 73 PRTPTH--LIIMATRPAQQARHTTFTAQNHPARGSYHPCLTKWESEAQRGKGVGLAK-AM 129
Query: 875 WWGTVG 880
WW + G
Sbjct: 130 WWTSWG 135
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 36.2 bits (82), Expect = 0.14
Identities = 39/141 (27%), Positives = 56/141 (39%), Gaps = 17/141 (12%)
Query: 720 STVVPVLLELSGPSGFLAPGSKVPLSLRIASFSGPQDLDLRTFVNPSFSLTSNLSRAHLE 779
+TV P +G +G S P++ S P+ +T + S LT S L
Sbjct: 1642 TTVTPTPTPTTGSTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLTE--STTLLS 1699
Query: 780 LNESAWGRLWLEVPDSAAPDSVVMVTVTAGGREANPVPPTHAFLRLLVSAPAPQDRHTTP 839
A +E+ +A P + T T+GG +P P T S P R TT
Sbjct: 1700 TLPPA-----IEMTSTAPPSTPTAPTTTSGGHTLSPPPST------TTSPPGTPTRGTTT 1748
Query: 840 TGSSDP----ILTTATPAFSP 856
SS P + TT T A++P
Sbjct: 1749 GSSSAPTPSTVQTTTTSAWTP 1769
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 35.4 bits (80), Expect = 0.24
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 597 AQTSLDFLFHFGIPMEDGPHPGLYPLTQPVAGLQTQLLVEVTGLGSRANPGDPQPHFSHV 656
A TS+ F P GP G L P+AG+ T+L G G PG P
Sbjct: 2825 AATSMRFAMSARFPSTPGPELGRQALGSPLAGISTRL----PGPGEPV-PGPAGPAQFIE 2879
Query: 657 ILRGVPEGAELGQVPLEPVGPPER 680
+ V +G G P GPP+R
Sbjct: 2880 LRHNVQKGLGPGGTPFPGQGPPQR 2903
>gi|7662346 ADNP homeobox 2 [Homo sapiens]
Length = 1131
Score = 35.4 bits (80), Expect = 0.24
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Query: 603 FLFHFGIPMEDGPHPGLYPLTQPVAGLQTQLLVEVTGLGSRANPGDPQPHFSHVILRGVP 662
FL H G+P+ +P + PL+QPV + + V + PG P V P
Sbjct: 356 FLSH-GVPLHQSVNPPVLPLSQPVGPVNKSVGTSVLPINQTVRPG-VLPLTQPVGPINRP 413
Query: 663 EGAELGQVPLEPVGPPERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHRAAPQPSTV 722
G G +P+ P P G+L A +SP +LS R ++ AG+ P+ V
Sbjct: 414 VGP--GVLPVSPSVTP--GVLQA-VSPGVLSVSRAVPSGVL---PAGQMTPAGQMTPAGV 465
Query: 723 VPVLLELSG--PSGFLAPGSKVPL 744
+P SG P+G + +P+
Sbjct: 466 IPGQTATSGVLPTGQMVQSGVLPV 489
>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform a [Homo sapiens]
Length = 6620
Score = 35.0 bits (79), Expect = 0.31
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 16/113 (14%)
Query: 380 LNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLTN------QVESLT 433
L + AL GG+ C + HT L D V T + + F N +++L
Sbjct: 4346 LENVEALEGGEALFECQLSQPEVAAHTWLLDDEPVHTSENAEVVFFENGLRHLLLLKNLR 4405
Query: 434 QERRCRVTFL----VTEDTSRVQGRARREILSPLRFEPYKAVALASGGEVIFT 482
+ CRVTFL VT V+G R EIL EP K A+ +G + FT
Sbjct: 4406 PQDSCRVTFLAGDMVTSAFLTVRG-WRLEIL-----EPLKNAAVRAGAQACFT 4452
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 35.0 bits (79), Expect = 0.31
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 16/113 (14%)
Query: 380 LNEIHALGGGDEPEMCLSALQLALLHTPPLSDIFVFTDASPKDAFLTN------QVESLT 433
L + AL GG+ C + HT L D V T + + F N +++L
Sbjct: 4346 LENVEALEGGEALFECQLSQPEVAAHTWLLDDEPVHTSENAEVVFFENGLRHLLLLKNLR 4405
Query: 434 QERRCRVTFL----VTEDTSRVQGRARREILSPLRFEPYKAVALASGGEVIFT 482
+ CRVTFL VT V+G R EIL EP K A+ +G + FT
Sbjct: 4406 PQDSCRVTFLAGDMVTSAFLTVRG-WRLEIL-----EPLKNAAVRAGAQACFT 4452
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 35.0 bits (79), Expect = 0.31
Identities = 70/275 (25%), Positives = 95/275 (34%), Gaps = 32/275 (11%)
Query: 642 SRANPGDPQPHFSHVILRGVPEGA--ELGQVPLEPVGPPERGLLAASLSPTLL-STPRPF 698
S P + P S PE + E ++P +PV P ++ P L P+
Sbjct: 309 SSETPTEVYPEPSTSTTMDFPESSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPKTT 368
Query: 699 SLELIGQDAAGRRLHRAAPQPSTVVPVL--------LELSGPSGFLAPGSKVPLSLRIAS 750
+LEL Q+++ P+T +P L LEL GPS P PLS +
Sbjct: 369 ALEL--QESSVASAMELPGPPATSMPELQGPPVTPVLELPGPSATPVPELPGPLSTPVPE 426
Query: 751 FSGPQDLDLRTFVNPSFSLTSNLSRAHLELNESAWGRLWLEVPDSAAPDSVVMVTVTAG- 809
GP + PS + LS+ L + G LE P P+ VM G
Sbjct: 427 LPGPPATAVPELPGPSVTPVPQLSQELPGLPAPSMG---LE-PPQEVPEPPVMAQELPGL 482
Query: 810 ----GREANPVPPTHAFLRLLVSAPAPQDRHTTPTGSS------DPILTTATPAF----S 855
P P L P P G + P +TTAT +
Sbjct: 483 PLVTAAVELPEQPAVTVAMELTEQPVTTTELEQPVGMTTVEHPGHPEVTTATGLLGQPEA 542
Query: 856 PFTLVTQGRAGAGLAAGSPWWGTVGGVLLLLGLAS 890
L G+ A A P +V GV L GL S
Sbjct: 543 TMVLELPGQPVATTALELPGQPSVTGVPELPGLPS 577
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 35.0 bits (79), Expect = 0.31
Identities = 70/275 (25%), Positives = 95/275 (34%), Gaps = 32/275 (11%)
Query: 642 SRANPGDPQPHFSHVILRGVPEGA--ELGQVPLEPVGPPERGLLAASLSPTLL-STPRPF 698
S P + P S PE + E ++P +PV P ++ P L P+
Sbjct: 309 SSETPTEVYPEPSTSTTMDFPESSAIEALRLPEQPVDVPSEIADSSMTRPQELPELPKTT 368
Query: 699 SLELIGQDAAGRRLHRAAPQPSTVVPVL--------LELSGPSGFLAPGSKVPLSLRIAS 750
+LEL Q+++ P+T +P L LEL GPS P PLS +
Sbjct: 369 ALEL--QESSVASAMELPGPPATSMPELQGPPVTPVLELPGPSATPVPELPGPLSTPVPE 426
Query: 751 FSGPQDLDLRTFVNPSFSLTSNLSRAHLELNESAWGRLWLEVPDSAAPDSVVMVTVTAG- 809
GP + PS + LS+ L + G LE P P+ VM G
Sbjct: 427 LPGPPATAVPELPGPSVTPVPQLSQELPGLPAPSMG---LE-PPQEVPEPPVMAQELPGL 482
Query: 810 ----GREANPVPPTHAFLRLLVSAPAPQDRHTTPTGSS------DPILTTATPAF----S 855
P P L P P G + P +TTAT +
Sbjct: 483 PLVTAAVELPEQPAVTVAMELTEQPVTTTELEQPVGMTTVEHPGHPEVTTATGLLGQPEA 542
Query: 856 PFTLVTQGRAGAGLAAGSPWWGTVGGVLLLLGLAS 890
L G+ A A P +V GV L GL S
Sbjct: 543 TMVLELPGQPVATTALELPGQPSVTGVPELPGLPS 577
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 35.0 bits (79), Expect = 0.31
Identities = 57/253 (22%), Positives = 91/253 (35%), Gaps = 23/253 (9%)
Query: 622 LTQPVAGLQTQLLVEVTGLGSRANPGDPQPHFSHV-ILRGVPEGAELGQVPLEPVGPPER 680
L VA + +LV + L S P P P + +L ++ PL P+ P+
Sbjct: 1537 LNSTVAPACSPVLVPASALASPF-PSAPNPAPAQASLLAPASSASQALATPLAPMAAPQT 1595
Query: 681 GLLAASLSPTL----LSTPRPFSLELIGQDAAGRRLHRAAPQPSTVVPVLLELSGPSGFL 736
+LA S +P L + P P + ++ + + P T + + P+ L
Sbjct: 1596 AILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPVL 1655
Query: 737 APGSK-----VPLSLRIASFSGPQDLDLRTFVNPSFSLTSNLSRAHLELNESAWG----R 787
AP S P+ + S + Q L L + P+ +S L
Sbjct: 1656 APSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQT 1715
Query: 788 LWLEVPDSAAPDSVVMVTVTAGGREANPVPPTHAFLRLLVSAPAPQDRHTTPTGSSDPIL 847
L L S P +++ G P+ PT L APAP +P G +
Sbjct: 1716 LSLTPASSLVPTPAQTLSLAPGP----PLGPTQT----LSLAPAPPLAPASPVGPAPAHT 1767
Query: 848 TTATPAFSPFTLV 860
T PA S +L+
Sbjct: 1768 LTLAPASSSASLL 1780
Score = 34.7 bits (78), Expect = 0.41
Identities = 56/242 (23%), Positives = 85/242 (35%), Gaps = 48/242 (19%)
Query: 656 VILRGVPEGAELGQVPLEPVGPPERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHRA 715
+++R P PL P P L A L+P TP +G A
Sbjct: 1311 IVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARA------P 1364
Query: 716 APQPSTVVPVLLELSGPSGFLAPGSKVPLSLRIASFSGPQDLDLRTFVNPSFSLTSNLSR 775
P P+ V P+L + PS ++ AS G L + + ++ SL S
Sbjct: 1365 MPTPTLVRPLLKLVHSPSPEVS-----------ASAPGAAPLTISSPLHVPSSLPGPASS 1413
Query: 776 AHLELNESAWGRLWLEVPDSAAPDSVVMVTVTAGGREANPVP-------PTHAFLRLLVS 828
+ +P+S+ S V TV+ + P+ P A L + +S
Sbjct: 1414 P-------------MPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPIS 1460
Query: 829 APAPQDRHTTPTGSSDPILTTATPAFSPFTLVTQGRAGAGLAAGSPWWGTVGGVLLLLGL 888
AP T + S +LT+ TP +P G + SP L LGL
Sbjct: 1461 APL------TVSASGPALLTSVTPPLAPVVPAAPGPPSLAPSGASP-----SASALTLGL 1509
Query: 889 AS 890
A+
Sbjct: 1510 AT 1511
>gi|61742782 leucine rich repeat and death domain containing protein
isoform 2 [Homo sapiens]
Length = 753
Score = 34.7 bits (78), Expect = 0.41
Identities = 44/151 (29%), Positives = 62/151 (41%), Gaps = 23/151 (15%)
Query: 651 PHFSHVILRGVPEGAELGQVPLEPVGPPERGLLAAS--------LSPTLLSTPRPFSLEL 702
PHFS ++ P V + PPE LL +S P PR S+++
Sbjct: 297 PHFSWFLVVSRP-------VSNACLVPPEGTLLCSSGHPGVKVIFPPGATEEPRRVSMQV 349
Query: 703 IGQDAAGRRLHRAAPQPSTVVPVLLELS--GPSGFLAPGS-KVPLSLRIASFSGPQD-LD 758
+ AGR L +P V LL LS GP FL P + ++PL I S + L
Sbjct: 350 VRM--AGRELQALLGEPEAAVSPLLCLSQSGPPSFLQPVTVQLPLPSGITGLSLDRSRLH 407
Query: 759 LRTFVNPSFSLTSNLSRAHLELNESAWGRLW 789
L + P+ + ++ LEL W LW
Sbjct: 408 LLYWAPPAATWDDITAQVVLELTHLYW--LW 436
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 34.3 bits (77), Expect = 0.53
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 10/71 (14%)
Query: 790 LEVPDSAAPDSVVMVTVTAGGREANPVPPTHAFLRLLVSAPAPQDRHTTPTGSSDP---- 845
+E+ +A P + T T+GG +P P T S P R TT SS P
Sbjct: 4245 IEMTSTAPPSTPTAPTTTSGGHTLSPPPST------TTSPPGTPTRGTTTGSSSAPTPST 4298
Query: 846 ILTTATPAFSP 856
+ TT T A++P
Sbjct: 4299 VQTTTTSAWTP 4309
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 33.9 bits (76), Expect = 0.69
Identities = 50/190 (26%), Positives = 74/190 (38%), Gaps = 24/190 (12%)
Query: 689 PTLLSTPRPFSLELIGQDAAGRRLHRAAPQPSTVVPVLLELSGPSGFLAPGSKVPLSLRI 748
P L S P P S +A +AP P+T+ PV P+ AP L+ +
Sbjct: 1747 PPLASAPLPPST------SASVPASTSAPLPATLTPV------PASTSAPVPASTLAPVL 1794
Query: 749 ASFSGPQDLDLRTFVNPSFSLTSNLSRAHLELNESAWGRLWLEVPDSAAPDSVVMVTVTA 808
AS S P V+ S S++ A + + SA P SA + ++ +V+
Sbjct: 1795 ASTSAPVPASPLAPVSASASVS-----ASVPASTSAAAITSSSAPASAPAPTPILASVST 1849
Query: 809 GGRE---ANPVPPTHAFLRLLVSAPAPQDRHTTPTGSSDPILTTAT-PAFSPFTLVTQGR 864
A+ P A SAP P ++P P++T T PA +P V
Sbjct: 1850 PASVTILASASIPILASALASTSAPTPAPAASSPAA---PVITAPTIPASAPTASVPLAP 1906
Query: 865 AGAGLAAGSP 874
A A A +P
Sbjct: 1907 ASASAPAPAP 1916
>gi|33457316 pleckstrin homology domain containing, family O member
2 [Homo sapiens]
Length = 490
Score = 33.5 bits (75), Expect = 0.90
Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 774 SRAHLELNESAWG----RLWLEVPDSAAPDSVVMVTVTAGGREANP---VPPTHAFLRLL 826
+R HL+ SA RL L+VPDS P V+ P +PPT FL
Sbjct: 155 TRVHLKEVASAASDGLLRLDLDVPDSGPPVFAPSNHVSEAQPRETPRPLMPPTKPFLAPE 214
Query: 827 VSAPAPQDRHTTPTGSSDPILTTATPAFSP 856
++P DR TP G P +A+ SP
Sbjct: 215 TTSPG--DRVETPVGERAPTPVSASSEVSP 242
>gi|24308241 zinc finger and BTB domain containing 2 [Homo sapiens]
Length = 514
Score = 33.5 bits (75), Expect = 0.90
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 20/97 (20%)
Query: 616 HPG-LYPLTQPVAGLQT--QLLVEVTGLGSRANP--GDPQPHFSHVILRGVPEGAELGQV 670
HP ++PL + G+Q L + T + S DP+P S + VPE ++L Q+
Sbjct: 121 HPDQVFPLASSLYGIQIADHQLRQATKIASAPEKLGRDPRPQTSRISQEQVPEASQLSQL 180
Query: 671 P----------LEPVGPPERGLLAASLSPTLLSTPRP 697
+ P P L SLSP L+STP P
Sbjct: 181 TSNLAQVNRTNMTPSDP-----LQTSLSPELVSTPVP 212
>gi|169205253 PREDICTED: hypothetical protein [Homo sapiens]
Length = 3859
Score = 33.1 bits (74), Expect = 1.2
Identities = 58/209 (27%), Positives = 83/209 (39%), Gaps = 31/209 (14%)
Query: 671 PLEPVGPPERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHRAAPQPSTVVPVLLELS 730
P+ PV P + +L+ +L+ + + P + A + P S VVPV
Sbjct: 326 PIVPVTPADSPVLSVTLADSPVVPVTPADSPFVPAIPADGPVVPVTPADSPVVPVT-PAD 384
Query: 731 GPSGFLAPGSK--VPLSLRIASFSGPQDLDLRTFVNPSFSLTSNLSRAHLELNE--SAWG 786
GP +A VP++ P D D V P+ S ++ A L +A G
Sbjct: 385 GPVVSVASADSPFVPVT--------PAD-DPIVSVTPADSPVVPVTSADSPLIPVTTADG 435
Query: 787 RLWLEVPDSAAPDSVVMVTV--TAGG----REANPVPPTHAFLRLLVSAP--------AP 832
R+ VP +AA D +V VT T G + VP T A + L+ P
Sbjct: 436 RV---VPVTAAGDPIVPVTPADTPGSPVTSADGPVVPVTSADIPLVPVTPPDGPVVPVTS 492
Query: 833 QDRHTTPTGSSDPILTTATPAFSPFTLVT 861
D P S+D + TPA SPF VT
Sbjct: 493 ADGPVAPVSSADGPVVPVTPADSPFIPVT 521
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 32.7 bits (73), Expect = 1.5
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 582 EIQVTAEDT---PGVRVQAQTSLDFLFHFGIPMEDGPHPGLYP-LTQPV 626
++Q+ A+D G+R+Q + LD +++FG + D PG+ P L+ PV
Sbjct: 308 QLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPV 356
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 32.7 bits (73), Expect = 1.5
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 582 EIQVTAEDT---PGVRVQAQTSLDFLFHFGIPMEDGPHPGLYP-LTQPV 626
++Q+ A+D G+R+Q + LD +++FG + D PG+ P L+ PV
Sbjct: 308 QLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPV 356
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 32.7 bits (73), Expect = 1.5
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 582 EIQVTAEDT---PGVRVQAQTSLDFLFHFGIPMEDGPHPGLYP-LTQPV 626
++Q+ A+D G+R+Q + LD +++FG + D PG+ P L+ PV
Sbjct: 320 QLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPV 368
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 32.7 bits (73), Expect = 1.5
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 673 EPVGPPERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHRAAPQPSTVVPVLLELSGP 732
EPV P A L P+ ST +P + E Q GR+ + P TVVP LEL
Sbjct: 1159 EPVVPT-----APELQPST-STDQPVTSEPTSQVTRGRKSRSSVKTPETVVPTALELQPS 1212
Query: 733 SGFLAPGSKVPLS 745
+ P + P S
Sbjct: 1213 TSTDRPVTSEPTS 1225
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,507,330
Number of Sequences: 37866
Number of extensions: 2277823
Number of successful extensions: 6447
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 6326
Number of HSP's gapped (non-prelim): 195
length of query: 891
length of database: 18,247,518
effective HSP length: 111
effective length of query: 780
effective length of database: 14,044,392
effective search space: 10954625760
effective search space used: 10954625760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.