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Search of human proteins with 15011898
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15011898 regulatory factor X4 isoform b [Homo sapiens]
(563 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15011898 regulatory factor X4 isoform b [Homo sapiens] 1137 0.0
gi|47132527 regulatory factor X4 isoform c [Homo sapiens] 1075 0.0
gi|19743886 regulatory factor X4 isoform a [Homo sapiens] 841 0.0
gi|27734871 regulatory factor X, 6 [Homo sapiens] 427 e-119
gi|238859557 regulatory factor X1 [Homo sapiens] 288 7e-78
gi|19743879 regulatory factor X2 isoform b [Homo sapiens] 288 1e-77
gi|19743881 regulatory factor X2 isoform a [Homo sapiens] 279 6e-75
gi|4506495 regulatory factor X3 isoform a [Homo sapiens] 278 7e-75
gi|19743884 regulatory factor X3 isoform b [Homo sapiens] 277 2e-74
gi|224586784 hypothetical protein LOC731220 [Homo sapiens] 85 2e-16
gi|148613886 regulatory factor X domain containing 2 [Homo sapiens] 69 1e-11
gi|71040090 regulatory factor X, 5 [Homo sapiens] 67 3e-11
gi|4557843 regulatory factor X, 5 [Homo sapiens] 67 3e-11
gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ... 40 0.007
gi|7019381 fibronectin leucine rich transmembrane protein 2 [Hom... 35 0.24
gi|69885149 Fc receptor-like and mucin-like 1 [Homo sapiens] 35 0.24
gi|223633941 hypothetical protein LOC389730 [Homo sapiens] 34 0.31
gi|91206406 hypothetical protein LOC642265 [Homo sapiens] 34 0.31
gi|169174618 PREDICTED: family with sequence similarity 75, memb... 34 0.31
gi|239743732 PREDICTED: family with sequence similarity 75, memb... 34 0.31
gi|153791826 hypothetical protein LOC26165 [Homo sapiens] 34 0.31
gi|133892686 hypothetical protein LOC727830 [Homo sapiens] 34 0.31
gi|146231958 hypothetical protein LOC647060 [Homo sapiens] 34 0.31
gi|165377334 hypothetical protein LOC727905 [Homo sapiens] 34 0.31
gi|27883842 BMI1 polycomb ring finger oncogene [Homo sapiens] 33 0.70
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 33 0.70
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 33 0.70
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 33 0.70
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 33 0.70
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 33 0.91
>gi|15011898 regulatory factor X4 isoform b [Homo sapiens]
Length = 563
Score = 1137 bits (2941), Expect = 0.0
Identities = 563/563 (100%), Positives = 563/563 (100%)
Query: 1 MIKRRAHPGAGGDRTRPRRRRSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNR 60
MIKRRAHPGAGGDRTRPRRRRSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNR
Sbjct: 1 MIKRRAHPGAGGDRTRPRRRRSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNR 60
Query: 61 ASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQF 120
ASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQF
Sbjct: 61 ASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQF 120
Query: 121 PQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPR 180
PQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPR
Sbjct: 121 PQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPR 180
Query: 181 SKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHF 240
SKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHF
Sbjct: 181 SKLGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHF 240
Query: 241 WQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLD 300
WQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLD
Sbjct: 241 WQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLD 300
Query: 301 EWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWR 360
EWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWR
Sbjct: 301 EWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWR 360
Query: 361 NVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVK 420
NVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVK
Sbjct: 361 NVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVK 420
Query: 421 VAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL 480
VAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL
Sbjct: 421 VAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL 480
Query: 481 HCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPV 540
HCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPV
Sbjct: 481 HCQERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPV 540
Query: 541 SNPSPEYTGLSTTGNGKSFKNFG 563
SNPSPEYTGLSTTGNGKSFKNFG
Sbjct: 541 SNPSPEYTGLSTTGNGKSFKNFG 563
>gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
Length = 735
Score = 1075 bits (2781), Expect = 0.0
Identities = 534/538 (99%), Positives = 536/538 (99%)
Query: 22 STESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIA 81
STESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIA
Sbjct: 13 STESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIA 72
Query: 82 EGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGI 141
EGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGI
Sbjct: 73 EGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGI 132
Query: 142 AVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPAS 201
AVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPAS
Sbjct: 133 AVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPAS 192
Query: 202 LPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIV 261
LPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIV
Sbjct: 193 LPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIV 252
Query: 262 GVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL 321
GVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL
Sbjct: 253 GVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL 312
Query: 322 SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDE 381
SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDE
Sbjct: 313 SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDE 372
Query: 382 HRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWS 441
HRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWS
Sbjct: 373 HRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWS 432
Query: 442 CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAE 501
CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAE
Sbjct: 433 CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAE 492
Query: 502 VREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGNGKSF 559
VREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTG +S+
Sbjct: 493 VREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSY 550
>gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
Length = 641
Score = 841 bits (2173), Expect = 0.0
Identities = 420/424 (99%), Positives = 422/424 (99%)
Query: 136 YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD 195
YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD
Sbjct: 33 YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD 92
Query: 196 LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS 255
LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS
Sbjct: 93 LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS 152
Query: 256 TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR 315
TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR
Sbjct: 153 TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR 212
Query: 316 NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM 375
NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM
Sbjct: 213 NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM 272
Query: 376 EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ 435
EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ
Sbjct: 273 EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ 332
Query: 436 FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG 495
FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG
Sbjct: 333 FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG 392
Query: 496 EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGN 555
EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTG
Sbjct: 393 EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGA 452
Query: 556 GKSF 559
+S+
Sbjct: 453 MQSY 456
>gi|27734871 regulatory factor X, 6 [Homo sapiens]
Length = 928
Score = 427 bits (1098), Expect = e-119
Identities = 214/436 (49%), Positives = 285/436 (65%), Gaps = 5/436 (1%)
Query: 63 KPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQ 122
K T TLQWLEENY + EGVC+PR LY HYLDFC K +P AA+FGK IRQ+FP
Sbjct: 117 KKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPL 176
Query: 123 LTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSK 182
LTTRRLGTRG SKYHYYGI +KESS YY +YS KG S + K T YS SK
Sbjct: 177 LTTRRLGTRGHSKYHYYGIGIKESSAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSK 236
Query: 183 LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 242
GTLLPEFP+ + L + ++KV T IMMY+THCQ ILD I NF+E+Q FLLHFWQ
Sbjct: 237 TGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQ 296
Query: 243 GMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEW 302
GMP H+LP+L + +++I VCDSILYK ++ VL+P +Q +P+SL IR FAK ++W
Sbjct: 297 GMPDHLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQW 356
Query: 303 LKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNV 362
+ +L +LPE L + K + RRF L+RQTS HL Q +R + + M+ D V
Sbjct: 357 VVSSLENLPEALTDKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERV 416
Query: 363 DLNSITKQTLYTMEDSRDEHRKLITQ-----LYQEFDHLLEEQSPIESYIEWLDTMVDRC 417
DLNSI Q L T+ S D + T+ ++QE LL++ + +E++IEWLDT+V++
Sbjct: 417 DLNSIGSQALLTISGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQR 476
Query: 418 VVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLL 477
V+K + + SLKK AQ FLL WS FG RV+ ++TL++A SFGSFHLI ++ D+Y+L +
Sbjct: 477 VIKTSKQNGRSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAM 536
Query: 478 ESLHCQERANELMRAM 493
E+ ++ EL +
Sbjct: 537 ETQFNNDKEQELQNLL 552
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 288 bits (738), Expect = 7e-78
Identities = 179/485 (36%), Positives = 259/485 (53%), Gaps = 64/485 (13%)
Query: 66 STPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTT 125
++PAT+QWL +NYE AEGV +PRS LY HYL C++ +PVNAASFGK+IR F L T
Sbjct: 434 ASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRT 493
Query: 126 RRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSE--------------------- 164
RRLGTRG SKYHYYG+ +K SS +M ++ A +
Sbjct: 494 RRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGMTNGV 553
Query: 165 -------TGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLN---LPASLPEEKVSTFIMMY 214
TG ++S Q Y LP+F + DL LP + + F ++Y
Sbjct: 554 AVGQQPSTGLSDISAQVQQYQQFLDASRSLPDFTEL-DLQGKVLPEGVGPGDIKAFQVLY 612
Query: 215 RTHCQRILDTVIRANFDEVQSFLLHFW--------------------QGMPPHMLPVLGS 254
R HC+ I+D ++ F V++ FW + +P +L +L
Sbjct: 613 REHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKAILVLLSK 672
Query: 255 -STVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPEN 313
V+ CD++LY+ + +L+P VL+ +P +LTQ IR FAK L+ WL A+ ++PE
Sbjct: 673 FEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEE 732
Query: 314 LRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLY 373
+ +K + F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q +
Sbjct: 733 MLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASW 792
Query: 374 TMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGS--LKK 431
R E R ++ +L Q+F L++Q+ +E + WLD +V +V QGS K
Sbjct: 793 V---CRCEDR-VVQRLEQDFKVTLQQQNSLEQWAAWLDGVVS----QVLKPYQGSAGFPK 844
Query: 432 VAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMR 491
A+ FLL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E Q + E
Sbjct: 845 AAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAK-GETPI 903
Query: 492 AMKGE 496
A+ GE
Sbjct: 904 AVMGE 908
>gi|19743879 regulatory factor X2 isoform b [Homo sapiens]
Length = 698
Score = 288 bits (736), Expect = 1e-77
Identities = 177/496 (35%), Positives = 261/496 (52%), Gaps = 60/496 (12%)
Query: 54 EEKENNRASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFG 113
+ ++ A S+PATLQWL +NYE AEGV +PRS+LY HYL C+++ PVNAASFG
Sbjct: 158 DSTRHSLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFG 217
Query: 114 KIIRQQFPQLTTRRLGTRGQSKYHYYGIAVK---------ESSQYY-------------- 150
K+IR F L TRRLGTRG SKYHYYGI +K E +QY
Sbjct: 218 KLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYR 277
Query: 151 -----DVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEF--PNVKDLNLPASLP 203
D + + + T ++ ++ Q+ + + + PEF P++ L +
Sbjct: 278 PAQKTDSLGDSGSHSGLHSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVT 337
Query: 204 EEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMP-----PHMLP-------- 250
V ++YR HC+ +D V+ F ++ L FW P LP
Sbjct: 338 LHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEG 397
Query: 251 -VLGSSTVVNI---------VGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLD 300
VL ++++ + CD ILY+A+ +L+P VL+ +P +LTQ IR FAK L+
Sbjct: 398 AVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLE 457
Query: 301 EWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWR 360
WL A+ D P+ + K + F+Q LRR TSLNHL QA+R V+ + QML D
Sbjct: 458 GWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLN 517
Query: 361 NVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVK 420
VD ++ +Q + + ++ +L Q+F L++QS ++ + WLD++V + + +
Sbjct: 518 RVDFANVQEQASWVCQC----EESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQ 573
Query: 421 VAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL 480
A S K A+QFLL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 574 HAG--SPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH- 630
Query: 481 HCQERANELMRAMKGE 496
E E A+ GE
Sbjct: 631 RVAEATGETPIAVMGE 646
>gi|19743881 regulatory factor X2 isoform a [Homo sapiens]
Length = 723
Score = 279 bits (713), Expect = 6e-75
Identities = 172/479 (35%), Positives = 252/479 (52%), Gaps = 60/479 (12%)
Query: 71 LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 130
LQWL +NYE AEGV +PRS+LY HYL C+++ PVNAASFGK+IR F L TRRLGT
Sbjct: 200 LQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLRTRRLGT 259
Query: 131 RGQSKYHYYGIAVK---------ESSQYY-------------------DVMYSKKGAAWV 162
RG SKYHYYGI +K E +QY D + + +
Sbjct: 260 RGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGL 319
Query: 163 SETGKKEVSKQTVAYSPRSKLGTLLPEF--PNVKDLNLPASLPEEKVSTFIMMYRTHCQR 220
T ++ ++ Q+ + + + PEF P++ L + V ++YR HC+
Sbjct: 320 HSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHCEA 379
Query: 221 ILDTVIRANFDEVQSFLLHFWQGMP-----PHMLP---------VLGSSTVVNI------ 260
+D V+ F ++ L FW P LP VL ++++
Sbjct: 380 TVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPI 439
Query: 261 ---VGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNI 317
+ CD ILY+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A+ D P+ +
Sbjct: 440 LRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQT 499
Query: 318 KFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMED 377
K + F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 500 KVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQC 559
Query: 378 SRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFL 437
++ +L Q+F L++QS ++ + WLD++V + + + A S K A+QFL
Sbjct: 560 ----EESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHAG--SPSFPKAARQFL 613
Query: 438 LMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 496
L WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E E E A+ GE
Sbjct: 614 LKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAEATGETPIAVMGE 671
>gi|4506495 regulatory factor X3 isoform a [Homo sapiens]
Length = 707
Score = 278 bits (712), Expect = 7e-75
Identities = 172/485 (35%), Positives = 251/485 (51%), Gaps = 61/485 (12%)
Query: 71 LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 130
LQWL +NYE AEGV +PRS LY HYL C+++ PVNAASFGK+IR F L TRRLGT
Sbjct: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
Query: 131 RGQSKYHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGK 167
RG SKYHYYGI VK S Q Y M G A + +G+
Sbjct: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
Query: 168 K---EVSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQR 220
+ V + +A S + LPEF V+ +LP E + + +YR HC+
Sbjct: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
Query: 221 ILDTVIRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSST 256
ILD V+ F ++ FW+ P ++ + +
Sbjct: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
Query: 257 VVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRN 316
++ + CD +Y+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A++++P+ +
Sbjct: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
Query: 317 IKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTME 376
K F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
Query: 377 DSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQF 436
+ ++ +L +F L++QS +E + WLD ++ + + + S K A+QF
Sbjct: 544 CDDN----MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQF 597
Query: 437 LLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 496
LL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E + E A+ GE
Sbjct: 598 LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAQATGETPIAVMGE 656
Query: 497 GSTAE 501
AE
Sbjct: 657 VREAE 661
>gi|19743884 regulatory factor X3 isoform b [Homo sapiens]
Length = 749
Score = 277 bits (708), Expect = 2e-74
Identities = 166/462 (35%), Positives = 243/462 (52%), Gaps = 60/462 (12%)
Query: 71 LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 130
LQWL +NYE AEGV +PRS LY HYL C+++ PVNAASFGK+IR F L TRRLGT
Sbjct: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
Query: 131 RGQSKYHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGK 167
RG SKYHYYGI VK S Q Y M G A + +G+
Sbjct: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
Query: 168 K---EVSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQR 220
+ V + +A S + LPEF V+ +LP E + + +YR HC+
Sbjct: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
Query: 221 ILDTVIRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSST 256
ILD V+ F ++ FW+ P ++ + +
Sbjct: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
Query: 257 VVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRN 316
++ + CD +Y+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A++++P+ +
Sbjct: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
Query: 317 IKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTME 376
K F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
Query: 377 DSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQF 436
+ ++ +L +F L++QS +E + WLD ++ + + + S K A+QF
Sbjct: 544 CDDN----MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQF 597
Query: 437 LLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 478
LL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 598 LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 639
>gi|224586784 hypothetical protein LOC731220 [Homo sapiens]
Length = 473
Score = 85.1 bits (209), Expect = 2e-16
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 13/285 (4%)
Query: 214 YRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAIS 273
Y +C+ IL V + L FW+ + + ++ V + D LYK I
Sbjct: 69 YCNYCRDILRNV--------EDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIE 120
Query: 274 GVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQT 333
VL+ L+ + + ++ F+K+ WL AL +P L+ K + F + LRR+T
Sbjct: 121 DVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKT 180
Query: 334 SLNHLCQASRTVIHSADITFQMLEDWR---NVDLNSITKQTLYTMEDSRDE-HRKLITQL 389
L+++ + R V+ S + D + N + +K+ L + DE +
Sbjct: 181 YLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKC 240
Query: 390 YQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIR 449
+ LL + + ++ L + + V + + ++ K+A F L W+ T V +
Sbjct: 241 LRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKE-EFTKLAASFQLRWNLLLTAVSK 299
Query: 450 DMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMK 494
MTL SFGS+HL HL+ +Y++++L+S +E E M +K
Sbjct: 300 AMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVK 344
>gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]
Length = 1460
Score = 68.6 bits (166), Expect = 1e-11
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 43 TSLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKN 102
+ L N + ++RA + H+ W+ E +P+ +Y Y +C+
Sbjct: 85 SGLSNGEKSDQNAMSSSRAQQMHA----FSWIRNTLEEHPETSLPKQEVYDEYKSYCDNL 140
Query: 103 DTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVK 144
P++AA FGKI++ FP + RRLGTRG+SKY Y G+ K
Sbjct: 141 GYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKK 182
>gi|71040090 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 67.4 bits (163), Expect = 3e-11
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 5 RAHPG---AGGDRTRPRRRRST-----ESWIERCLNE----SENKRYSSHTSLGNVSNDE 52
RA PG AG T +R R T ++ +E L + S+N + + L +
Sbjct: 16 RAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSGPTTG 75
Query: 53 NEEKENNRASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDT-QPVNAAS 111
++ E + S A +W+ + E C+P+ ++Y Y +CE +P++ A+
Sbjct: 76 DKSSEPSTLSNEEYMYA-YRWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTAN 134
Query: 112 FGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVK 144
FGKIIR+ FP + RRLG RGQSKY Y GI K
Sbjct: 135 FGKIIREIFPDIKARRLGGRGQSKYCYSGIRRK 167
>gi|4557843 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 67.4 bits (163), Expect = 3e-11
Identities = 50/153 (32%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 5 RAHPG---AGGDRTRPRRRRST-----ESWIERCLNE----SENKRYSSHTSLGNVSNDE 52
RA PG AG T +R R T ++ +E L + S+N + + L +
Sbjct: 16 RAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSGPTTG 75
Query: 53 NEEKENNRASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDT-QPVNAAS 111
++ E + S A +W+ + E C+P+ ++Y Y +CE +P++ A+
Sbjct: 76 DKSSEPSTLSNEEYMYA-YRWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTAN 134
Query: 112 FGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVK 144
FGKIIR+ FP + RRLG RGQSKY Y GI K
Sbjct: 135 FGKIIREIFPDIKARRLGGRGQSKYCYSGIRRK 167
>gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo
sapiens]
Length = 1835
Score = 39.7 bits (91), Expect = 0.007
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 72 QWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPV-NAASFGKIIRQQFPQLTTRRL-- 128
QWL ++E+ + R+ +Y YL C K + + F K +R FP T +R+
Sbjct: 526 QWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVED 585
Query: 129 -GTRGQSKYHYYGI 141
+ GQ+ H G+
Sbjct: 586 SSSNGQAHIHVVGV 599
>gi|7019381 fibronectin leucine rich transmembrane protein 2 [Homo
sapiens]
Length = 660
Score = 34.7 bits (78), Expect = 0.24
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 505 EIILTEAAAPTPSP-VPSFSPAKSATSVEVPPPSSPVSNPSPEYT 548
E+ + + PT +P +P F+PA S S PP+ + NPS YT
Sbjct: 352 ELNMNLLSCPTTTPGLPLFTPAPSTASPTTQPPTLSIPNPSRSYT 396
>gi|69885149 Fc receptor-like and mucin-like 1 [Homo sapiens]
Length = 376
Score = 34.7 bits (78), Expect = 0.24
Identities = 19/52 (36%), Positives = 24/52 (46%)
Query: 501 EVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLST 552
E+R + + AA PT +P P S A E P P P PS E G S+
Sbjct: 274 EIRVQGASSSAAPPTLNPAPQKSAAPGTAPEEAPGPLPPPPTPSSEDPGFSS 325
>gi|223633941 hypothetical protein LOC389730 [Homo sapiens]
Length = 1343
Score = 34.3 bits (77), Expect = 0.31
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 513 APTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPE 546
A TPSP P + S ++ + P PS P+ +PSPE
Sbjct: 166 ASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPE 199
>gi|91206406 hypothetical protein LOC642265 [Homo sapiens]
Length = 1347
Score = 34.3 bits (77), Expect = 0.31
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 513 APTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPE 546
A TPSP P + S ++ + P PS P+ +PSPE
Sbjct: 166 ASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPE 199
>gi|169174618 PREDICTED: family with sequence similarity 75, member
A4 isoform 2 [Homo sapiens]
Length = 1272
Score = 34.3 bits (77), Expect = 0.31
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 513 APTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPE 546
A TPSP P + S ++ + P PS P+ +PSPE
Sbjct: 91 ASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPE 124
>gi|239743732 PREDICTED: family with sequence similarity 75, member
A4 isoform 1 [Homo sapiens]
Length = 1361
Score = 34.3 bits (77), Expect = 0.31
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 513 APTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPE 546
A TPSP P + S ++ + P PS P+ +PSPE
Sbjct: 180 ASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPE 213
>gi|153791826 hypothetical protein LOC26165 [Homo sapiens]
Length = 1347
Score = 34.3 bits (77), Expect = 0.31
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 513 APTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPE 546
A TPSP P + S ++ + P PS P+ +PSPE
Sbjct: 166 ASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPE 199
>gi|133892686 hypothetical protein LOC727830 [Homo sapiens]
Length = 1347
Score = 34.3 bits (77), Expect = 0.31
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 513 APTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPE 546
A TPSP P + S ++ + P PS P+ +PSPE
Sbjct: 166 ASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPE 199
>gi|146231958 hypothetical protein LOC647060 [Homo sapiens]
Length = 1347
Score = 34.3 bits (77), Expect = 0.31
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 513 APTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPE 546
A TPSP P + S ++ + P PS P+ +PSPE
Sbjct: 166 ASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPE 199
>gi|165377334 hypothetical protein LOC727905 [Homo sapiens]
Length = 1347
Score = 34.3 bits (77), Expect = 0.31
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 513 APTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPE 546
A TPSP P + S ++ + P PS P+ +PSPE
Sbjct: 166 ASTPSPGPMTTSVSSLSASQPPEPSLPLEHPSPE 199
>gi|27883842 BMI1 polycomb ring finger oncogene [Homo sapiens]
Length = 326
Score = 33.1 bits (74), Expect = 0.70
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 528 ATSVEVPPPSSPVSNPSPEYTGLSTTGNGKS 558
+TS +P PS+PV +P P++ +S+T NG S
Sbjct: 267 STSSCLPSPSTPVQSPHPQFPHISSTMNGTS 297
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 0.70
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 510 EAAAPTPS-----PVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGNGKS 558
EA P P PVPS +P SA+S + PPP P S P P S++GN ++
Sbjct: 280 EAVPPPPPQNNKPPVPS-TPRPSASS-QAPPPPPPPSRPGPPPLPPSSSGNDET 331
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 0.70
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 510 EAAAPTPS-----PVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGNGKS 558
EA P P PVPS +P SA+S + PPP P S P P S++GN ++
Sbjct: 280 EAVPPPPPQNNKPPVPS-TPRPSASS-QAPPPPPPPSRPGPPPLPPSSSGNDET 331
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 33.1 bits (74), Expect = 0.70
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 16/110 (14%)
Query: 447 VIRDMTLHSAPS----------FGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 496
++ DM SAP GS+ L M +L L + CQ E +++
Sbjct: 558 LLLDMARRSAPERPSAAEAIKVCGSYLLQRGMDSRKILAHLRASICQVYQEEETISLQNA 617
Query: 497 GSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPE 546
S E++ + AP P P P F P S T + P P +P E
Sbjct: 618 FSVVELKPSV------APAPEPSPGFLPVNSDTGLVAVPGPVPGQHPCGE 661
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 33.1 bits (74), Expect = 0.70
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 9/60 (15%)
Query: 498 STAEVREEIILTEAAAPTPSPVPSFSPA--------KSATSVEVPP-PSSPVSNPSPEYT 548
++ E+ + T A P P+P P+ +PA K T EVPP P+SP SP T
Sbjct: 495 ASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPET 554
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 32.7 bits (73), Expect = 0.91
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 507 ILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGNGKS 558
IL+ +P+PSP+P P SA S PP S S+ S + S++ + S
Sbjct: 821 ILSPTVSPSPSPIPPVEPLMSAAS-PGPPTLSSSSSSSSSSSSFSSSSSSSS 871
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.131 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,398,516
Number of Sequences: 37866
Number of extensions: 1047869
Number of successful extensions: 8799
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 7809
Number of HSP's gapped (non-prelim): 777
length of query: 563
length of database: 18,247,518
effective HSP length: 107
effective length of query: 456
effective length of database: 14,195,856
effective search space: 6473310336
effective search space used: 6473310336
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.