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Search of human proteins with 149588708
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149588708 transmembrane protein 91 isoform c [Homo sapiens]
(133 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149588708 transmembrane protein 91 isoform c [Homo sapiens] 284 1e-77
gi|149588687 transmembrane protein 91 isoform c [Homo sapiens] 284 1e-77
gi|154707844 transmembrane protein 91 isoform a [Homo sapiens] 254 2e-68
gi|110578660 transmembrane protein 91 isoform b [Homo sapiens] 254 2e-68
gi|149588874 transmembrane protein 91 isoform d [Homo sapiens] 252 7e-68
gi|149588540 transmembrane protein 91 isoform e [Homo sapiens] 252 7e-68
gi|13376347 hypothetical protein LOC79953 [Homo sapiens] 60 5e-10
gi|157743286 transmembrane protein 90A [Homo sapiens] 60 7e-10
gi|77681565 NG5 protein [Homo sapiens] 41 3e-04
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens] 35 0.018
gi|6912694 tumor necrosis factor receptor 13B [Homo sapiens] 32 0.15
gi|100913209 heat shock transcription factor 4 isoform b [Homo s... 31 0.33
gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain... 30 0.74
gi|239754046 PREDICTED: similar to hCG1654959 [Homo sapiens] 29 0.97
gi|239748575 PREDICTED: similar to hCG1654959 [Homo sapiens] 29 0.97
gi|239742592 PREDICTED: similar to hCG1654959 [Homo sapiens] 29 0.97
gi|20149563 stomatin (EPB72)-like 1 [Homo sapiens] 29 0.97
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 29 1.3
gi|22027651 adaptor-related protein complex 1 beta 1 subunit iso... 28 1.6
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens] 28 2.2
gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens] 28 2.2
gi|110578657 LOST1 [Homo sapiens] 28 2.2
gi|33457301 glycerophosphodiester phosphodiesterase domain conta... 28 2.2
gi|222136575 interleukin 10 receptor, alpha precursor [Homo sapi... 28 2.8
gi|239747398 PREDICTED: similar to hCG1648021 [Homo sapiens] 28 2.8
gi|239741224 PREDICTED: similar to hCG1648021 [Homo sapiens] 28 2.8
gi|21536468 AXL receptor tyrosine kinase isoform 2 [Homo sapiens] 28 2.8
gi|21536466 AXL receptor tyrosine kinase isoform 1 [Homo sapiens] 28 2.8
gi|30425506 transmembrane protein 52 [Homo sapiens] 28 2.8
gi|118918413 MICAL C-terminal like [Homo sapiens] 28 2.8
>gi|149588708 transmembrane protein 91 isoform c [Homo sapiens]
Length = 133
Score = 284 bits (727), Expect = 1e-77
Identities = 133/133 (100%), Positives = 133/133 (100%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
Query: 121 TRPSCPYSPHCEP 133
TRPSCPYSPHCEP
Sbjct: 121 TRPSCPYSPHCEP 133
>gi|149588687 transmembrane protein 91 isoform c [Homo sapiens]
Length = 133
Score = 284 bits (727), Expect = 1e-77
Identities = 133/133 (100%), Positives = 133/133 (100%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
Query: 121 TRPSCPYSPHCEP 133
TRPSCPYSPHCEP
Sbjct: 121 TRPSCPYSPHCEP 133
>gi|154707844 transmembrane protein 91 isoform a [Homo sapiens]
Length = 172
Score = 254 bits (648), Expect = 2e-68
Identities = 121/121 (100%), Positives = 121/121 (100%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|110578660 transmembrane protein 91 isoform b [Homo sapiens]
Length = 139
Score = 254 bits (648), Expect = 2e-68
Identities = 123/131 (93%), Positives = 123/131 (93%), Gaps = 1/131 (0%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
Query: 121 TRPSCPYSPHC 131
P C C
Sbjct: 121 -HPQCLTYSRC 130
>gi|149588874 transmembrane protein 91 isoform d [Homo sapiens]
Length = 127
Score = 252 bits (643), Expect = 7e-68
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
>gi|149588540 transmembrane protein 91 isoform e [Homo sapiens]
Length = 123
Score = 252 bits (643), Expect = 7e-68
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG
Sbjct: 1 MDSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAG 60
Query: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK
Sbjct: 61 LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQK 120
>gi|13376347 hypothetical protein LOC79953 [Homo sapiens]
Length = 258
Score = 60.1 bits (144), Expect = 5e-10
Identities = 27/47 (57%), Positives = 32/47 (68%)
Query: 75 SDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQKT 121
SD SD + P DHLGL+VFSMLCCFWP+GIAAF L+ +T
Sbjct: 161 SDYSSDTESEDNFLMMPPRDHLGLSVFSMLCCFWPLGIAAFYLSHET 207
>gi|157743286 transmembrane protein 90A [Homo sapiens]
Length = 238
Score = 59.7 bits (143), Expect = 7e-10
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 54 LPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFL---PHDHLGLAVFSMLCCFWPV 110
+ +VS G+ E +D +SD+ FL P DHLGL +FSMLCCFWP+
Sbjct: 117 IQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPL 176
Query: 111 GIAAFCLAQKT 121
GIAAF +Q T
Sbjct: 177 GIAAFYFSQGT 187
>gi|77681565 NG5 protein [Homo sapiens]
Length = 306
Score = 40.8 bits (94), Expect = 3e-04
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 92 PHDHLGLAVFSMLCCFWPVGIAAFCLAQKTR 122
PHD++ +AV + +CCFWP GI A A + R
Sbjct: 220 PHDYMPIAVLTTICCFWPTGIIAIFKAVQVR 250
>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
Length = 340
Score = 35.0 bits (79), Expect = 0.018
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 62 GEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQKT 121
G PR SS + +GG P D++ LA+ S C WPV I AF A +
Sbjct: 237 GSPRGSLSRHPSSQLAGPGVEGGEGTQK--PRDYIILAILSCFCPMWPVNIVAFAYAVMS 294
Query: 122 RPS 124
R S
Sbjct: 295 RNS 297
>gi|6912694 tumor necrosis factor receptor 13B [Homo sapiens]
Length = 293
Score = 32.0 bits (71), Expect = 0.15
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 21/89 (23%)
Query: 61 LGEPRPPDVEDMSSSDSDSDWDG----GSRLSPFLP------------HDHLGLAVFSML 104
L R +VE+ +SD+ + G GS SP LP + LGL + ++L
Sbjct: 118 LRRQRSGEVEN--NSDNSGRYQGLEHRGSEASPALPGLKLSADQVALVYSTLGLCLCAVL 175
Query: 105 CCFWPVGIAAFCLAQKTRPSCPYSPHCEP 133
CCF +A C +K C P P
Sbjct: 176 CCFL---VAVACFLKKRGDPCSCQPRSRP 201
>gi|100913209 heat shock transcription factor 4 isoform b [Homo
sapiens]
Length = 492
Score = 30.8 bits (68), Expect = 0.33
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 7 RELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG--EP 64
R+L L EG+ C TPA+ G+ L++ F +S PLP + GL
Sbjct: 207 RKLSLMLDEGSSCPTPAKFNTCPLPGALLQDPYFIQS---------PLPETNLGLSPHRA 257
Query: 65 RPPDVEDMSSSDSDSDWDGGSRLSP 89
R P + D+ DS G+RLSP
Sbjct: 258 RGPIISDI---PEDSPSPEGTRLSP 279
>gi|66392157 RGD motif, leucine rich repeats, tropomodulin domain and
proline-rich containing [Homo sapiens]
Length = 1435
Score = 29.6 bits (65), Expect = 0.74
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 9/60 (15%)
Query: 18 ECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG-EPRPPDVEDMSSSD 76
+ + PA++P R + L+ R + +PP PS+ +GLG EP PP + SS +
Sbjct: 1367 QLQAPAERPLRLQRSPVLK--------RRPKLEAPPSPSLGSGLGTEPLPPQPTEPSSPE 1418
>gi|239754046 PREDICTED: similar to hCG1654959 [Homo sapiens]
Length = 104
Score = 29.3 bits (64), Expect = 0.97
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 24 QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
QKP H P + F L +S GLG P +SD W
Sbjct: 38 QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90
Query: 84 GSRLSPFLPHDHLG 97
P+ P HLG
Sbjct: 91 ACPSFPWCPQTHLG 104
>gi|239748575 PREDICTED: similar to hCG1654959 [Homo sapiens]
Length = 104
Score = 29.3 bits (64), Expect = 0.97
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 24 QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
QKP H P + F L +S GLG P +SD W
Sbjct: 38 QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90
Query: 84 GSRLSPFLPHDHLG 97
P+ P HLG
Sbjct: 91 ACPSFPWCPQTHLG 104
>gi|239742592 PREDICTED: similar to hCG1654959 [Homo sapiens]
Length = 104
Score = 29.3 bits (64), Expect = 0.97
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 24 QKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDG 83
QKP H P + F L +S GLG P +SD W
Sbjct: 38 QKPAPHSQSHPKNALEFG-------VLKKREEGLSKGLGTKLDPTSASAHASDGAHRWRA 90
Query: 84 GSRLSPFLPHDHLG 97
P+ P HLG
Sbjct: 91 ACPSFPWCPQTHLG 104
>gi|20149563 stomatin (EPB72)-like 1 [Homo sapiens]
Length = 398
Score = 29.3 bits (64), Expect = 0.97
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 20 ETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDS 79
+ P P L S L+++A L FL + S++ G P P D +M S
Sbjct: 224 QPPQDSPAGPNLDSTLQQLA-------LHFLGGSMNSMAGGAPSPGPADTVEMVSEVEPP 276
Query: 80 DWDGGSRLSPFLP 92
G+R SP P
Sbjct: 277 APQVGARSSPKQP 289
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 28.9 bits (63), Expect = 1.3
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
Query: 22 PAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLG-----EPRPPDVEDMSSSD 76
P P R SP A E+ L L PP PSV G EP PP +E +S +
Sbjct: 1519 PPPSPRRSVPPSPTSPRASEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFE 1578
Query: 77 SDSDWDGGSRLSPFLPH 93
S L+P PH
Sbjct: 1579 KPE-----SPLTPGPPH 1590
>gi|22027651 adaptor-related protein complex 1 beta 1 subunit
isoform a [Homo sapiens]
Length = 949
Score = 28.5 bits (62), Expect = 1.6
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 42 ESLRGLQFLSPPLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSP 89
E + G F++PP +V A LG P + D+ S GS ++P
Sbjct: 672 EGIGGTNFVAPPTAAVPANLGAPIGSGLSDLFDLTSGVGTLSGSYVAP 719
>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens]
Length = 548
Score = 28.1 bits (61), Expect = 2.2
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 17 TECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVED 71
TE ETP P E PL ++ + +PP S GLG+ PP ED
Sbjct: 424 TESETPV--PAAAETADPLFYPSWYKGQTRKATTNPPCTPGSEGLGQIGPPGSED 476
>gi|34878821 tripartite motif-containing 55 isoform 2 [Homo sapiens]
Length = 540
Score = 28.1 bits (61), Expect = 2.2
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 17 TECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPPDVED 71
TE ETP P E PL ++ + +PP S GLG+ PP ED
Sbjct: 424 TESETPV--PAAAETADPLFYPSWYKGQTRKATTNPPCTPGSEGLGQIGPPGSED 476
>gi|110578657 LOST1 [Homo sapiens]
Length = 177
Score = 28.1 bits (61), Expect = 2.2
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 53 PLPSVSAG-LGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHLGLAVFSMLCCFWPVG 111
P ++S G L P P SS + S P D+L LAV + C WP+
Sbjct: 61 PFKAISEGHLEAPLPRSPSRASSRRASSIATTSYAQDQEAPRDYLILAVVACFCPVWPLN 120
Query: 112 IAAFCLAQKTRPS 124
+ ++ +R S
Sbjct: 121 LIPLIISIMSRSS 133
>gi|33457301 glycerophosphodiester phosphodiesterase domain
containing 4 [Homo sapiens]
Length = 520
Score = 28.1 bits (61), Expect = 2.2
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 84 GSRLSPFLPHDHLGLAVFSMLCCFWPVGIAAFCLAQKTR 122
G + F P+ HL +++ M+ FWPV CL ++ R
Sbjct: 98 GLSMQIFAPYVHL-VSITVMVILFWPVAFYVACLEREVR 135
>gi|222136575 interleukin 10 receptor, alpha precursor [Homo
sapiens]
Length = 578
Score = 27.7 bits (60), Expect = 2.8
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 48 QFLSP-PLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGG 84
QFL P P P LG PP + D SS S + D G
Sbjct: 334 QFLLPDPHPQADRTLGNREPPVLGDSCSSGSSNSTDSG 371
>gi|239747398 PREDICTED: similar to hCG1648021 [Homo sapiens]
Length = 183
Score = 27.7 bits (60), Expect = 2.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 82 DGGSRLSPFLP-HDHLGLAVFSMLCCFWPVGIAAFCLAQKTRPSCPYSPHCEP 133
DG + FLP DHLG++ S L + +A FC + P +P C+P
Sbjct: 42 DGTDPGTLFLPASDHLGIS--SPLAISGTIFLAIFCFWDQPTPFLWLAPSCQP 92
>gi|239741224 PREDICTED: similar to hCG1648021 [Homo sapiens]
Length = 183
Score = 27.7 bits (60), Expect = 2.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 82 DGGSRLSPFLP-HDHLGLAVFSMLCCFWPVGIAAFCLAQKTRPSCPYSPHCEP 133
DG + FLP DHLG++ S L + +A FC + P +P C+P
Sbjct: 42 DGTDPGTLFLPASDHLGIS--SPLAISGTIFLAIFCFWDQPTPFLWLAPSCQP 92
>gi|21536468 AXL receptor tyrosine kinase isoform 2 [Homo sapiens]
Length = 885
Score = 27.7 bits (60), Expect = 2.8
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
Query: 2 DSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGL 61
D PS EL++ L + PAQ+P EI + G + P P + G
Sbjct: 783 DRPSFTELREDLENTLKALPPAQEPD---------EILYVNMDEGGGYPEP--PGAAGGA 831
Query: 62 GEPRPPDVEDMSS 74
P PD +D S
Sbjct: 832 DPPTQPDPKDSCS 844
>gi|21536466 AXL receptor tyrosine kinase isoform 1 [Homo sapiens]
Length = 894
Score = 27.7 bits (60), Expect = 2.8
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 11/73 (15%)
Query: 2 DSPSLRELQQPLLEGTECETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGL 61
D PS EL++ L + PAQ+P EI + G + P P + G
Sbjct: 792 DRPSFTELREDLENTLKALPPAQEPD---------EILYVNMDEGGGYPEP--PGAAGGA 840
Query: 62 GEPRPPDVEDMSS 74
P PD +D S
Sbjct: 841 DPPTQPDPKDSCS 853
>gi|30425506 transmembrane protein 52 [Homo sapiens]
Length = 209
Score = 27.7 bits (60), Expect = 2.8
Identities = 25/93 (26%), Positives = 34/93 (36%), Gaps = 17/93 (18%)
Query: 45 RGLQFLSP--------PLPSVSAGLGEPRPPDVEDMSSSDSDSDWDGGSRLSPFLPHDHL 96
RGL+ L P PLP V+ G + S D +R S +
Sbjct: 9 RGLRLLLPLLPLLPLLPLPQVALGFAD---------GSCDPSDQCPPQARWSSLWHVGLI 59
Query: 97 GLAVFSMLCCFWPVGIAAFCLAQKTRPSCPYSP 129
LAV +L C G FC +K + P+ P
Sbjct: 60 LLAVLLLLLCGVTAGCVRFCCLRKQAQAQPHLP 92
>gi|118918413 MICAL C-terminal like [Homo sapiens]
Length = 695
Score = 27.7 bits (60), Expect = 2.8
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 20 ETPAQKPGRHELGSPLREIAFAESLRGLQFLSPPLPSVSAGLGEPRPP 67
E+ +K R GSP R++ +S + L+ L P S S P PP
Sbjct: 413 ESRQRKDIRDLFGSPKRKVLPEDSAQALEKLLQPFKSTSLRQAAPPPP 460
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.445
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,663,731
Number of Sequences: 37866
Number of extensions: 340135
Number of successful extensions: 1486
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1442
Number of HSP's gapped (non-prelim): 102
length of query: 133
length of database: 18,247,518
effective HSP length: 91
effective length of query: 42
effective length of database: 14,801,712
effective search space: 621671904
effective search space used: 621671904
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.