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Search of human proteins with 149363632
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149363632 coiled-coil domain containing 29 [Homo sapiens]
(161 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149363632 coiled-coil domain containing 29 [Homo sapiens] 316 6e-87
gi|239743762 PREDICTED: hypothetical protein XP_002342954 [Homo ... 311 2e-85
gi|169217383 PREDICTED: similar to coiled-coil domain containing... 276 6e-75
gi|169178850 PREDICTED: similar to coiled-coil domain containing... 271 2e-73
gi|239750312 PREDICTED: similar to hCG1744891 [Homo sapiens] 256 8e-69
gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo ... 227 4e-60
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 219 1e-57
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 219 1e-57
gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 219 1e-57
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 214 2e-56
gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 214 2e-56
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 214 2e-56
gi|239742325 PREDICTED: similar to coiled-coil domain containing... 194 4e-50
gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens] 164 4e-41
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 145 1e-35
gi|169169660 PREDICTED: hypothetical protein [Homo sapiens] 101 3e-22
gi|169169929 PREDICTED: hypothetical protein [Homo sapiens] 101 3e-22
gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 84 5e-17
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 50 6e-07
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 49 2e-06
gi|217272804 hyaluronan-mediated motility receptor isoform d [Ho... 46 2e-05
gi|217272802 hyaluronan-mediated motility receptor isoform a [Ho... 46 2e-05
gi|217416398 hyaluronan-mediated motility receptor isoform c [Ho... 46 2e-05
gi|217416394 hyaluronan-mediated motility receptor isoform b [Ho... 46 2e-05
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 45 2e-05
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 44 5e-05
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 44 6e-05
gi|187761324 shootin1 isoform a [Homo sapiens] 44 6e-05
gi|50511340 shootin1 isoform b [Homo sapiens] 44 6e-05
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 44 8e-05
>gi|149363632 coiled-coil domain containing 29 [Homo sapiens]
Length = 161
Score = 316 bits (809), Expect = 6e-87
Identities = 161/161 (100%), Positives = 161/161 (100%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ
Sbjct: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ
Sbjct: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
Query: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 161
AVEKLEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL
Sbjct: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 161
>gi|239743762 PREDICTED: hypothetical protein XP_002342954 [Homo
sapiens]
Length = 183
Score = 311 bits (797), Expect = 2e-85
Identities = 157/161 (97%), Positives = 160/161 (99%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLNVFGNEDFDCHGDLK DQLKMDILIKKLKQKFDDLTA+KEALSSKCVNLAKDNQ
Sbjct: 23 MTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQ 82
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVE+SKLQEYKLELDEKAMQ
Sbjct: 83 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQ 142
Query: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 161
AVEK+EEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL
Sbjct: 143 AVEKIEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 183
>gi|169217383 PREDICTED: similar to coiled-coil domain containing 29
[Homo sapiens]
Length = 185
Score = 276 bits (706), Expect = 6e-75
Identities = 139/161 (86%), Positives = 150/161 (93%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLNVFGNEDF CH DLKTDQLKMDILIKKLKQKFDDLT ++EA+SSKCVNLAKDNQ
Sbjct: 1 MTINMLNVFGNEDFVCHEDLKTDQLKMDILIKKLKQKFDDLTPEEEAVSSKCVNLAKDNQ 60
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
V+QQE LSMKKVQQ+CEKLEEDKKML+EEILNLKTHMENN VE+SKLQEYK E DE+A+Q
Sbjct: 61 VIQQELLSMKKVQQECEKLEEDKKMLEEEILNLKTHMENNMVELSKLQEYKSETDERAIQ 120
Query: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 161
AVEKLEEIHLQME DCVEQI RETKR VAVL+TCS LL+SL
Sbjct: 121 AVEKLEEIHLQMEADCVEQIIRETKRTVAVLDTCSHLLSSL 161
>gi|169178850 PREDICTED: similar to coiled-coil domain containing 29
[Homo sapiens]
Length = 197
Score = 271 bits (693), Expect = 2e-73
Identities = 136/161 (84%), Positives = 151/161 (93%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLNVFGNEDF CH DLKTDQLKMDILIKKLKQKFDDL A++EA+SSKCVNL+KDNQ
Sbjct: 1 MTINMLNVFGNEDFVCHEDLKTDQLKMDILIKKLKQKFDDLMAEEEAVSSKCVNLSKDNQ 60
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
V+QQE LSMKKVQQ+CEKLEE++KML+EEILNLKTHMEN+ VE+SKLQEYK ELDE+AMQ
Sbjct: 61 VIQQELLSMKKVQQECEKLEENQKMLEEEILNLKTHMENSMVELSKLQEYKSELDERAMQ 120
Query: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 161
AVEKL+EIHLQMELDCVEQI RETKR VAVL+TC LL+SL
Sbjct: 121 AVEKLKEIHLQMELDCVEQIIRETKRTVAVLDTCCHLLSSL 161
>gi|239750312 PREDICTED: similar to hCG1744891 [Homo sapiens]
Length = 154
Score = 256 bits (653), Expect = 8e-69
Identities = 128/146 (87%), Positives = 137/146 (93%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLNVFGNEDF CH DLKTDQLKMDILIKKLKQKFDDLT ++EA+SSKCVNLAKDNQ
Sbjct: 1 MTINMLNVFGNEDFVCHEDLKTDQLKMDILIKKLKQKFDDLTPEEEAVSSKCVNLAKDNQ 60
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
V+QQE LSMKKVQQ+CEKLEEDKKML+EEILNLKTHMENN VE+SKLQEYK E DE+A+Q
Sbjct: 61 VIQQELLSMKKVQQECEKLEEDKKMLEEEILNLKTHMENNMVELSKLQEYKSEPDERAIQ 120
Query: 121 AVEKLEEIHLQMELDCVEQITRETKR 146
AVEKLEEIHLQME DCVEQI RETKR
Sbjct: 121 AVEKLEEIHLQMEADCVEQIIRETKR 146
>gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo
sapiens]
Length = 146
Score = 227 bits (578), Expect = 4e-60
Identities = 114/139 (82%), Positives = 129/139 (92%), Gaps = 2/139 (1%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLNVFGNEDF CH DLKTDQLKMDILIKKLKQKFDDL A++EA+SSKCVNL+KDNQ
Sbjct: 1 MTINMLNVFGNEDFVCHEDLKTDQLKMDILIKKLKQKFDDLMAEEEAVSSKCVNLSKDNQ 60
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
V+QQE LSMKKVQQ+CEKLEE++KML+EEILNLKTHMEN+ VE+SKLQEYK ELDE+AMQ
Sbjct: 61 VIQQELLSMKKVQQECEKLEENQKMLEEEILNLKTHMENSMVELSKLQEYKSELDERAMQ 120
Query: 121 AVEKLEEIHLQMELDCVEQ 139
AVEKL+EIHLQ + C+ Q
Sbjct: 121 AVEKLKEIHLQ--VTCLNQ 137
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 219 bits (557), Expect = 1e-57
Identities = 108/151 (71%), Positives = 127/151 (84%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLN F NEDF CHGDL TDQLKMDIL KKLKQKFDDL A+KEA+SSKCVNLAKDN+
Sbjct: 821 MTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFDDLMAEKEAVSSKCVNLAKDNE 880
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
VL QE LSM KVQ++CEKLE+DKKML+E++LNLKTHME + VE+ K+QEYK ELDE+AMQ
Sbjct: 881 VLHQELLSMGKVQEKCEKLEKDKKMLEEKVLNLKTHMEKDMVELGKVQEYKSELDERAMQ 940
Query: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVL 151
A+EKLEEIHLQ + + +Q+ + K A L
Sbjct: 941 AIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 971
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 219 bits (557), Expect = 1e-57
Identities = 108/151 (71%), Positives = 127/151 (84%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLN F NEDF CHGDL TDQLKMDIL KKLKQKFDDL A+KEA+SSKCVNLAKDN+
Sbjct: 850 MTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFDDLMAEKEAVSSKCVNLAKDNE 909
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
VL QE LSM KVQ++CEKLE+DKKML+E++LNLKTHME + VE+ K+QEYK ELDE+AMQ
Sbjct: 910 VLHQELLSMGKVQEKCEKLEKDKKMLEEKVLNLKTHMEKDMVELGKVQEYKSELDERAMQ 969
Query: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVL 151
A+EKLEEIHLQ + + +Q+ + K A L
Sbjct: 970 AIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 1000
>gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1139
Score = 219 bits (557), Expect = 1e-57
Identities = 108/151 (71%), Positives = 127/151 (84%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLN F NEDF CHGDL TDQLKMDIL KKLKQKFDDL A+KEA+SSKCVNLAKDN+
Sbjct: 850 MTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFDDLMAEKEAVSSKCVNLAKDNE 909
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
VL QE LSM KVQ++CEKLE+DKKML+E++LNLKTHME + VE+ K+QEYK ELDE+AMQ
Sbjct: 910 VLHQELLSMGKVQEKCEKLEKDKKMLEEKVLNLKTHMEKDMVELGKVQEYKSELDERAMQ 969
Query: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVL 151
A+EKLEEIHLQ + + +Q+ + K A L
Sbjct: 970 AIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 1000
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 214 bits (546), Expect = 2e-56
Identities = 105/151 (69%), Positives = 126/151 (83%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLN F NEDF CHGDL TDQLKMDIL KKLKQKF+DL A+KEA+SS+CVNLAKDN+
Sbjct: 820 MTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFNDLVAEKEAVSSECVNLAKDNE 879
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
VL QE LSM+ VQ++CEKLE+DKKML+EE+LNLKTHME + VE+ KLQEYK ELDE+A+Q
Sbjct: 880 VLHQELLSMRNVQEKCEKLEKDKKMLEEEVLNLKTHMEKDMVELGKLQEYKSELDERAVQ 939
Query: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVL 151
+EKLEEIHLQ + + +Q+ + K A L
Sbjct: 940 EIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 970
>gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1002
Score = 214 bits (546), Expect = 2e-56
Identities = 105/151 (69%), Positives = 126/151 (83%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLN F NEDF CHGDL TDQLKMDIL KKLKQKF+DL A+KEA+SS+CVNLAKDN+
Sbjct: 713 MTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFNDLVAEKEAVSSECVNLAKDNE 772
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
VL QE LSM+ VQ++CEKLE+DKKML+EE+LNLKTHME + VE+ KLQEYK ELDE+A+Q
Sbjct: 773 VLHQELLSMRNVQEKCEKLEKDKKMLEEEVLNLKTHMEKDMVELGKLQEYKSELDERAVQ 832
Query: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVL 151
+EKLEEIHLQ + + +Q+ + K A L
Sbjct: 833 EIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 863
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 214 bits (546), Expect = 2e-56
Identities = 105/151 (69%), Positives = 126/151 (83%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MTINMLN F NEDF CHGDL TDQLKMDIL KKLKQKF+DL A+KEA+SS+CVNLAKDN+
Sbjct: 820 MTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFNDLVAEKEAVSSECVNLAKDNE 879
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
VL QE LSM+ VQ++CEKLE+DKKML+EE+LNLKTHME + VE+ KLQEYK ELDE+A+Q
Sbjct: 880 VLHQELLSMRNVQEKCEKLEKDKKMLEEEVLNLKTHMEKDMVELGKLQEYKSELDERAVQ 939
Query: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVL 151
+EKLEEIHLQ + + +Q+ + K A L
Sbjct: 940 EIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 970
>gi|239742325 PREDICTED: similar to coiled-coil domain containing 29
[Homo sapiens]
Length = 150
Score = 194 bits (492), Expect = 4e-50
Identities = 96/125 (76%), Positives = 115/125 (92%)
Query: 37 KFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTH 96
+FDDL A++EA+SSKCVNLAKDNQV+QQE LSMKKVQQ+CEKLEE++KML+EEILNLKTH
Sbjct: 2 RFDDLMAEEEAVSSKCVNLAKDNQVIQQELLSMKKVQQECEKLEENQKMLEEEILNLKTH 61
Query: 97 MENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVEQITRETKRIVAVLNTCSR 156
MEN+ VE+S+LQ+YK ELDE+AMQAVEKL+EI+L ME DC+EQI RETKR AVL+TCS
Sbjct: 62 MENSIVELSELQDYKSELDERAMQAVEKLKEINLHMEPDCIEQIIRETKRTAAVLDTCSH 121
Query: 157 LLTSL 161
LL+SL
Sbjct: 122 LLSSL 126
>gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens]
Length = 561
Score = 164 bits (414), Expect = 4e-41
Identities = 82/116 (70%), Positives = 100/116 (86%)
Query: 33 KLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILN 92
+++ +FDD A+KEA+SSKCVNLAK+ QV QQE LSMKKVQQ+CEKLEEDKKML+EEILN
Sbjct: 443 QVESQFDDFMAEKEAVSSKCVNLAKEIQVFQQELLSMKKVQQECEKLEEDKKMLEEEILN 502
Query: 93 LKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVEQITRETKRIV 148
LKTHMEN+ VE+SKLQEYK ELDE+AMQAVEKLEEIHLQ + + +Q+ + K I+
Sbjct: 503 LKTHMENSMVELSKLQEYKSELDERAMQAVEKLEEIHLQEQAEHKKQLEQLNKDII 558
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 145 bits (367), Expect = 1e-35
Identities = 71/147 (48%), Positives = 105/147 (71%), Gaps = 1/147 (0%)
Query: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
MT LN + N +F HGDLKT Q +MDI I KLK K DDLTA+ E SKC++L NQ
Sbjct: 1369 MTRKKLNEYENGEFSFHGDLKTSQFEMDIQINKLKHKIDDLTAELETAGSKCLHLDTKNQ 1428
Query: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
+LQ+E LSMK VQ++CEKL+++KK L++E++NL++H+E N VE+ ++++YK E++E+A Q
Sbjct: 1429 ILQEELLSMKTVQKKCEKLQKNKKKLEQEVINLRSHIERNMVELGQVKQYKQEIEERARQ 1488
Query: 121 AV-EKLEEIHLQMELDCVEQITRETKR 146
+ EKL+E++L ++ Q E R
Sbjct: 1489 EIAEKLKEVNLFLQAQAASQENLEQFR 1515
Score = 29.3 bits (64), Expect = 1.5
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 27 MDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQ--QEFLSMKKVQQQCEKLEEDKK 84
+ + IKK++ K + L Q+E +K + ++Q ++ +E S++ Q E+ +
Sbjct: 749 LTVKIKKMEDKVNVL--QRELSETKEIKSQLEHQKVEWERELCSLRFSLNQEEEKRRNAD 806
Query: 85 MLKEEI---LNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVEQIT 141
L E+I L K VE+ + E L+ E ++ V+ +Q D Q++
Sbjct: 807 TLYEKIREQLRRKEEQYRKEVEVKQQLELSLQTLEMELRTVKSNLNQVVQERNDAQRQLS 866
Query: 142 RE 143
RE
Sbjct: 867 RE 868
Score = 26.9 bits (58), Expect = 7.6
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 12/111 (10%)
Query: 16 CHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQ 75
C DLK + K + L K +KQ + LT + + L +N +L + + K+ +++
Sbjct: 942 CFEDLKIVKEKNEDLQKTIKQNEETLTQTISQYNGRLSVLTAENAMLNSKLENEKQSKER 1001
Query: 76 CEKLEE-----------DKKMLKEEILNLKTHMENNRVEISKLQEYKLELD 115
E E D+ + L+ + R E S+LQ+ K+ D
Sbjct: 1002 LEAEVESYHSRLAAAIHDRDQSETSKRELELAFQRARDECSRLQD-KMNFD 1051
>gi|169169660 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 101 bits (251), Expect = 3e-22
Identities = 53/100 (53%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 32 KKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEIL 91
K L++ +L + KC+ LAK NQV+QQE LSMK+VQQ+C+KLEE K+L++E++
Sbjct: 316 KFLRRHLMNLQQSWKLYLQKCLYLAKKNQVIQQELLSMKEVQQKCKKLEEVNKILEQEVV 375
Query: 92 NLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQ 131
NLKTH E N VE ++E KL+L+E+A Q +EKLEEI+LQ
Sbjct: 376 NLKTH-EKNMVEFGDVEECKLQLEERAGQEIEKLEEINLQ 414
>gi|169169929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 101 bits (251), Expect = 3e-22
Identities = 53/100 (53%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 32 KKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEIL 91
K L++ +L + KC+ LAK NQV+QQE LSMK+VQQ+C+KLEE K+L++E++
Sbjct: 316 KFLRRHLMNLQQSWKLYLQKCLYLAKKNQVIQQELLSMKEVQQKCKKLEEVNKILEQEVV 375
Query: 92 NLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQ 131
NLKTH E N VE ++E KL+L+E+A Q +EKLEEI+LQ
Sbjct: 376 NLKTH-EKNMVEFGDVEECKLQLEERAGQEIEKLEEINLQ 414
>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
Length = 1427
Score = 84.0 bits (206), Expect = 5e-17
Identities = 45/111 (40%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 26 KMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQ--QEFLSMKKVQQQCEKLEEDK 83
+MD K+ + DLT +E + S+C++L +N+VLQ Q SMK +Q+QCE L+++K
Sbjct: 1112 RMDQCEKEKAGRKIDLTEAQETVPSRCLHLDAENEVLQLQQTLFSMKAIQKQCETLQKNK 1171
Query: 84 KMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAV-EKLEEIHLQME 133
K LK+E++NLK++ME N +E K + +KL ++E+A + + EKL E L ++
Sbjct: 1172 KQLKQEVVNLKSYMERNMLERGKAEWHKLLIEERARKEIEEKLNEAILTLQ 1222
Score = 29.6 bits (65), Expect = 1.2
Identities = 31/136 (22%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 24 QLKMDI--LIKKLKQKFD--DLTAQKEALSSKCVNLAKDNQVLQQEFLSMK--------- 70
QLK ++ L+K+L+ + DL Q+ + K ++ +D ++LQ + L+ K
Sbjct: 742 QLKWNLRRLVKELRTVRNNLDLVVQERNDAQKQLSEEQDARILQDQILTSKQKELEMARK 801
Query: 71 KVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEE--I 128
K+ + + +K L E L+ + R+EI ++ + ++K + +E ++E
Sbjct: 802 KMNSEISHRHQKEKDLFHEDCMLQEEIALLRLEIDTIKNQNKQKEKKYFEDIEAVKEKND 861
Query: 129 HLQMELDCVEQITRET 144
+LQ + E+ ET
Sbjct: 862 NLQKIIKLNEETLTET 877
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 50.4 bits (119), Expect = 6e-07
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 19 DLKTDQLKMDILIK---KLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQ 75
DL+ ++ K++ L K KL+Q+ DDL E C++L + + L+ + +K Q+
Sbjct: 1013 DLQMEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLCMDLERAKRKLEGD---LKLAQES 1069
Query: 76 CEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELD 135
E DK+ L E++ + M N + +I Q ++L +K + ++EE+ ++E +
Sbjct: 1070 TMDTENDKQQLNEKLKKKEFEMSNLQGKIEDEQALAIQLQKKIKELQARIEELEEEIEAE 1129
Query: 136 CVEQITRETKR 146
+ E +R
Sbjct: 1130 RASRAKAEKQR 1140
Score = 46.2 bits (108), Expect = 1e-05
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 32 KKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQE----FLSMKKVQQQCEKLEEDKKMLK 87
KKL Q+ D EA++SKC +L K Q LQ E + +++ C L++ ++
Sbjct: 1395 KKLAQRLQDAEEHVEAVNSKCASLEKTKQRLQNEVEDLMIDVERSNAACIALDKKQRNFD 1454
Query: 88 EEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVEQITRETKRI 147
+ + K E + E+ Q+ L + + EE LD +E + RE K +
Sbjct: 1455 KVLAEWKQKYEETQAELEASQKESRSLSTELFKVKNAYEE-----SLDHLETLKRENKNL 1509
Score = 42.4 bits (98), Expect = 2e-04
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 23/139 (16%)
Query: 16 CHGDLKTDQLKMDILIKKLKQKFDD-------LTAQKEALSSKCVNLAKDNQVLQQEFLS 68
C +KT +++++ IK++ ++ +D LTA+K L +C L KD L+ L+
Sbjct: 909 CDQLIKT-KIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLE---LT 964
Query: 69 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
+ KV+++ E K L EE+ L I+KL + K L E Q ++ L
Sbjct: 965 LAKVEKEKHATENKVKNLTEEMAGLDE-------TIAKLTKEKKALQEAHQQTLDDL--- 1014
Query: 129 HLQMELDCVEQITRETKRI 147
QME D V +T+ ++
Sbjct: 1015 --QMEEDKVNTLTKAKTKL 1031
Score = 42.0 bits (97), Expect = 2e-04
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 20 LKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQC--- 76
L Q D ++ + KQK+++ A+ EA K+++ L E +K ++
Sbjct: 1446 LDKKQRNFDKVLAEWKQKYEETQAELEASQ-------KESRSLSTELFKVKNAYEESLDH 1498
Query: 77 -EKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQME 133
E L+ + K L++EI +L + I +L++ K +LD + + LEE +E
Sbjct: 1499 LETLKRENKNLQQEISDLTEQIAEGGKHIHELEKVKKQLDHEKSELQTSLEEAEASLE 1556
Score = 33.5 bits (75), Expect = 0.081
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 26 KMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQV-LQQEFLSMKKVQQQCEKLEEDKK 84
K + +K+++ ++ T Q EA ++ D+ L ++ S+++V+Q KLE++K
Sbjct: 1170 KREAEFQKMRRDLEESTLQHEATAAALRKKHADSVAELGEQIDSLQRVKQ---KLEKEKS 1226
Query: 85 MLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEE 127
LK EI +L ++ME + ++ L+++ + K EE
Sbjct: 1227 ELKMEINDLASNMETVSKAKANFEKMCRTLEDQLSEIKTKEEE 1269
Score = 32.7 bits (73), Expect = 0.14
Identities = 12/49 (24%), Positives = 31/49 (63%)
Query: 87 KEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELD 135
++E+ N+K E + E++K + + EL+EK + +++ ++ LQ++ +
Sbjct: 850 EKEMANMKEEFEKTKEELAKTEAKRKELEEKMVTLMQEKNDLQLQVQAE 898
Score = 29.3 bits (64), Expect = 1.5
Identities = 18/99 (18%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 30 LIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEE 89
++K + DD ++ L + + + ++Q E +++++ E+ E +KM ++E
Sbjct: 1653 ILKDTQLHLDDAIRGQDDLKEQLAMVERRANLMQAE---VEELRASLERTERGRKMAEQE 1709
Query: 90 ILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
+L+ ++ + + L K +L+ Q ++E+I
Sbjct: 1710 LLDASERVQLLHTQNTSLINTKKKLETDISQIQGEMEDI 1748
Score = 28.1 bits (61), Expect = 3.4
Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 8/117 (6%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTA----QKEALSSKCVNLAKDNQVLQQEF----LSMK 70
DL+ L+ + L++K D A Q ++L L K+ L+ E +M+
Sbjct: 1181 DLEESTLQHEATAAALRKKHADSVAELGEQIDSLQRVKQKLEKEKSELKMEINDLASNME 1240
Query: 71 KVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEE 127
V + E+ + L++++ +KT E + I++L K L ++ + +L+E
Sbjct: 1241 TVSKAKANFEKMCRTLEDQLSEIKTKEEEQQRLINELSAQKARLHTESGEFSRQLDE 1297
Score = 27.7 bits (60), Expect = 4.5
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 11/126 (8%)
Query: 26 KMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEK------- 78
K + + L+ K +D A L K L + L++E + + + + EK
Sbjct: 1086 KKEFEMSNLQGKIEDEQALAIQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSR 1145
Query: 79 -LEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ---AVEKLEEIHLQMEL 134
LEE + L+E +E N+ ++ Q+ + +L+E +Q L + H
Sbjct: 1146 ELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEESTLQHEATAAALRKKHADSVA 1205
Query: 135 DCVEQI 140
+ EQI
Sbjct: 1206 ELGEQI 1211
Score = 27.3 bits (59), Expect = 5.8
Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 31 IKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQ----------------- 73
I++LK++ ++ T K L+ + D +L++++ ++ +
Sbjct: 1316 IEELKRQLEEETKAKSTLAHALQSARHDCDLLREQYEEEQEAKAELQRGMSKANSEVAQW 1375
Query: 74 ---------QQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEK 117
Q+ E+LEE KK L + + + + H+E + + L++ K L +
Sbjct: 1376 RTKYETDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNSKCASLEKTKQRLQNE 1428
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 48.9 bits (115), Expect = 2e-06
Identities = 37/157 (23%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 17 HGDLKTDQLKMDILIKKLKQKFD---DLTAQK-EALSSKCVNLAKDNQVLQQEFLSM--- 69
+G+L+ Q K++ + KL+Q+ + +A+K + KC + A + + +Q+ + +
Sbjct: 925 NGELEDTQTKLEKQVSKLEQELQKQRESSAEKLRKMEEKCESAAHEADLKRQKVIELTGT 984
Query: 70 -KKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISK----LQEYKLELDEKAMQAVEK 124
++V+ + ++ +E+ +++EI++LK EN + +S+ L + K EL EK AV++
Sbjct: 985 ARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDMILDQTKTEL-EKKTNAVKE 1043
Query: 125 LEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 161
LE++ E + E + + + N L ++L
Sbjct: 1044 LEKLQHSTETELTEALQKREVLETELQNAHGELKSTL 1080
Score = 41.2 bits (95), Expect = 4e-04
Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 32 KKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEIL 91
KK+ +K + + A++E L N K+N K++Q++C + + ++LKE++
Sbjct: 375 KKVAEKLEKVQAEEEILERNLTNCEKEN----------KRLQERCGLYKSELEILKEKLR 424
Query: 92 NLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI-HLQMELDCVEQITRE 143
LK N + KL+ ++ E Q E + I L+ EL+ ++I R+
Sbjct: 425 QLKEENNNGK---EKLRIMAVKNSEVMAQLTESRQSILKLESELENKDEILRD 474
Score = 36.2 bits (82), Expect = 0.013
Identities = 27/132 (20%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 11 NEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMK 70
N D + +T Q ++ + ++L +K + + + ++ KC L + L+++ ++
Sbjct: 657 NSDLKVNMAHRTSQFQL--IQEELLEKASNSSKLESEMTKKCSQLLTLEKQLEEKIVAYS 714
Query: 71 KVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHL 130
+ + +LE++ E+I +L+T++ EK A EK ++IHL
Sbjct: 715 SIAAKNAELEQELMEKNEKIRSLETNINTEH--------------EKICLAFEKAKKIHL 760
Query: 131 QMELDCVEQITR 142
+ + +QI R
Sbjct: 761 EQHKEMEKQIER 772
Score = 35.4 bits (80), Expect = 0.021
Identities = 22/105 (20%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 31 IKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEI 90
I++L+ K + A+ L + Q++Q+E L KLE + ++
Sbjct: 643 IEELRTKLIQIEAENSDLKVNMAHRTSQFQLIQEELLEKAS---NSSKLESEMTKKCSQL 699
Query: 91 LNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELD 135
L L+ +E V S + EL+++ M+ EK+ + + +
Sbjct: 700 LTLEKQLEEKIVAYSSIAAKNAELEQELMEKNEKIRSLETNINTE 744
Score = 33.9 bits (76), Expect = 0.062
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 19 DLKTDQLKMDILIKK----LKQKFDDLT----AQKEALSSKCVNLAKDNQVLQQEFLSMK 70
D K + L+MD +K+ LKQ+ +T +E + K L++ L +K
Sbjct: 1120 DKKQELLEMDQALKERNWELKQRAAQVTHLDMTIREHRGEMEQKIIKLEGTLEKSELELK 1179
Query: 71 KVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHL 130
+ +Q E L + + KE++ + M N EIS+L K E+ E+ Q ++++E +
Sbjct: 1180 ECNKQIESLNDKLQNAKEQLREKEFIMLQNEQEISQL---KKEI-ERTQQRMKEMESVMK 1235
Query: 131 QME 133
+ E
Sbjct: 1236 EQE 1238
Score = 29.3 bits (64), Expect = 1.5
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 15/139 (10%)
Query: 20 LKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKL 79
LK ++ L K+LK K L E L + Q+LQQE + +++ KL
Sbjct: 876 LKKKSEEVYCLQKELKIKNHSLQETSEQNVILQHTLQQQQQMLQQETIRNGELEDTQTKL 935
Query: 80 EEDKKMLKEEILNLKTHMENNRVEISKLQE----YKLELDEKAMQAVE--------KLEE 127
E+ L++E L+ E++ ++ K++E E D K + +E K+E
Sbjct: 936 EKQVSKLEQE---LQKQRESSAEKLRKMEEKCESAAHEADLKRQKVIELTGTARQVKIEM 992
Query: 128 IHLQMELDCVEQITRETKR 146
+ EL +E+ KR
Sbjct: 993 DQYKEELSKMEKEIMHLKR 1011
Score = 28.5 bits (62), Expect = 2.6
Identities = 20/106 (18%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMK-KVQQQCE 77
D+ DQ K ++ +K +L + + ++ + +VL+ E + +++
Sbjct: 1024 DMILDQTKTEL--EKKTNAVKELEKLQHSTETELTEALQKREVLETELQNAHGELKSTLR 1081
Query: 78 KLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVE 123
+L+E + +L++ L+L+ + ++L+E K+E+++K + +E
Sbjct: 1082 QLQELRDVLQKAQLSLEEKYTTIKDLTAELRECKMEIEDKKQELLE 1127
>gi|217272804 hyaluronan-mediated motility receptor isoform d [Homo
sapiens]
Length = 638
Score = 45.8 bits (107), Expect = 2e-05
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 12 EDFDCHGDLKTDQLKMDI--LIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEF-LS 68
E+ C D + ++ K+DI L + LK+K D++ + K++L V L+K + L + L
Sbjct: 152 EEISCASD-QVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLL 210
Query: 69 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
K+ + + E + L E+ NLK + E KLQ+ +L++D Q E +
Sbjct: 211 EKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSL 270
Query: 129 HLQM 132
H ++
Sbjct: 271 HQKL 274
Score = 34.7 bits (78), Expect = 0.036
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 69 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
++K + +LEE+ K +EIL+LK +E N V +SK E +L+ K Q +EK +E
Sbjct: 161 VEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVE---DLNVKC-QLLEKEKED 216
Query: 129 HLQMELDCVEQITRETKRI 147
H+ + E + E + +
Sbjct: 217 HVNRNREHNENLNAEMQNL 235
Score = 34.3 bits (77), Expect = 0.048
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Query: 20 LKTDQLKMDILIKKLKQKFDDL-----TAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQ 74
L+ +L++D L+++ K+ L + Q+E + K NL ++ L+Q + K+QQ
Sbjct: 249 LQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEK--NLFEEE--LKQTLDELDKLQQ 304
Query: 75 QCEK-------LEEDKKMLKEEILNLKTHMENNRVEISKLQ----EYKLELDEKAMQAVE 123
+ E+ LEE+ K EE+ L+ ++ E+ K + L L EK V+
Sbjct: 305 KEEQAERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQATLLLQEKYDSMVQ 364
Query: 124 KLEEIHLQME 133
LE++ Q E
Sbjct: 365 SLEDVTAQFE 374
Score = 33.1 bits (74), Expect = 0.11
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 31 IKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQC---EKLEEDKKMLK 87
++ LKQKF ++E L K L D+ + Q++ LS Q+ C E++ ++K + +
Sbjct: 232 MQNLKQKFILEQQEREKLQQK--ELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFE 289
Query: 88 EEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLE 126
EE+ ++ + + + + +L+E+A E+L+
Sbjct: 290 EELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELK 328
Score = 30.8 bits (68), Expect = 0.53
Identities = 26/135 (19%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEF------LSMKKV 72
DL+T+ KM+ + ++ L+A L + + L + N++L+ +F +++ +
Sbjct: 21 DLETELEKMEARLNAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRIL 80
Query: 73 QQQCEKLEEDKK------MLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLE 126
+ KL ++ M K+E + +K + +E S+ + +LE +++ + E
Sbjct: 81 SLELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDE 140
Query: 127 EIHLQMELDCVEQIT 141
+ + L+ +E+I+
Sbjct: 141 KSETEKLLEYIEEIS 155
Score = 29.6 bits (65), Expect = 1.2
Identities = 29/139 (20%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEK 78
+L+ L++ L K + K + A++E + K L + L++ + +++ +
Sbjct: 76 NLRILSLELMKLRNKRETKMRGMMAKQEGMEMK---LQVTQRSLEESQGKIAQLEGKLVS 132
Query: 79 LEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVE 138
+E++K K E L ++E ++++YKL++ + EK +EI L ++ E
Sbjct: 133 IEKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEI-LSLKQSLEE 191
Query: 139 QITRETKRIVAVLNTCSRL 157
I +K++ + C L
Sbjct: 192 NIVILSKQVEDLNVKCQLL 210
>gi|217272802 hyaluronan-mediated motility receptor isoform a [Homo
sapiens]
Length = 725
Score = 45.8 bits (107), Expect = 2e-05
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 12 EDFDCHGDLKTDQLKMDI--LIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEF-LS 68
E+ C D + ++ K+DI L + LK+K D++ + K++L V L+K + L + L
Sbjct: 239 EEISCASD-QVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLL 297
Query: 69 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
K+ + + E + L E+ NLK + E KLQ+ +L++D Q E +
Sbjct: 298 EKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSL 357
Query: 129 HLQM 132
H ++
Sbjct: 358 HQKL 361
Score = 34.7 bits (78), Expect = 0.036
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 69 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
++K + +LEE+ K +EIL+LK +E N V +SK E +L+ K Q +EK +E
Sbjct: 248 VEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVE---DLNVKC-QLLEKEKED 303
Query: 129 HLQMELDCVEQITRETKRI 147
H+ + E + E + +
Sbjct: 304 HVNRNREHNENLNAEMQNL 322
Score = 34.3 bits (77), Expect = 0.048
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Query: 20 LKTDQLKMDILIKKLKQKFDDL-----TAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQ 74
L+ +L++D L+++ K+ L + Q+E + K NL ++ L+Q + K+QQ
Sbjct: 336 LQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEK--NLFEEE--LKQTLDELDKLQQ 391
Query: 75 QCEK-------LEEDKKMLKEEILNLKTHMENNRVEISKLQ----EYKLELDEKAMQAVE 123
+ E+ LEE+ K EE+ L+ ++ E+ K + L L EK V+
Sbjct: 392 KEEQAERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQATLLLQEKYDSMVQ 451
Query: 124 KLEEIHLQME 133
LE++ Q E
Sbjct: 452 SLEDVTAQFE 461
Score = 33.1 bits (74), Expect = 0.11
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 31 IKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQC---EKLEEDKKMLK 87
++ LKQKF ++E L K L D+ + Q++ LS Q+ C E++ ++K + +
Sbjct: 319 MQNLKQKFILEQQEREKLQQK--ELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFE 376
Query: 88 EEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLE 126
EE+ ++ + + + + +L+E+A E+L+
Sbjct: 377 EELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELK 415
Score = 30.8 bits (68), Expect = 0.53
Identities = 26/135 (19%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEF------LSMKKV 72
DL+T+ KM+ + ++ L+A L + + L + N++L+ +F +++ +
Sbjct: 108 DLETELEKMEARLNAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRIL 167
Query: 73 QQQCEKLEEDKK------MLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLE 126
+ KL ++ M K+E + +K + +E S+ + +LE +++ + E
Sbjct: 168 SLELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDE 227
Query: 127 EIHLQMELDCVEQIT 141
+ + L+ +E+I+
Sbjct: 228 KSETEKLLEYIEEIS 242
Score = 29.6 bits (65), Expect = 1.2
Identities = 29/139 (20%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEK 78
+L+ L++ L K + K + A++E + K L + L++ + +++ +
Sbjct: 163 NLRILSLELMKLRNKRETKMRGMMAKQEGMEMK---LQVTQRSLEESQGKIAQLEGKLVS 219
Query: 79 LEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVE 138
+E++K K E L ++E ++++YKL++ + EK +EI L ++ E
Sbjct: 220 IEKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEI-LSLKQSLEE 278
Query: 139 QITRETKRIVAVLNTCSRL 157
I +K++ + C L
Sbjct: 279 NIVILSKQVEDLNVKCQLL 297
>gi|217416398 hyaluronan-mediated motility receptor isoform c [Homo
sapiens]
Length = 709
Score = 45.8 bits (107), Expect = 2e-05
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 12 EDFDCHGDLKTDQLKMDI--LIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEF-LS 68
E+ C D + ++ K+DI L + LK+K D++ + K++L V L+K + L + L
Sbjct: 223 EEISCASD-QVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLL 281
Query: 69 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
K+ + + E + L E+ NLK + E KLQ+ +L++D Q E +
Sbjct: 282 EKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSL 341
Query: 129 HLQM 132
H ++
Sbjct: 342 HQKL 345
Score = 34.7 bits (78), Expect = 0.036
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 69 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
++K + +LEE+ K +EIL+LK +E N V +SK E +L+ K Q +EK +E
Sbjct: 232 VEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVE---DLNVKC-QLLEKEKED 287
Query: 129 HLQMELDCVEQITRETKRI 147
H+ + E + E + +
Sbjct: 288 HVNRNREHNENLNAEMQNL 306
Score = 34.3 bits (77), Expect = 0.048
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Query: 20 LKTDQLKMDILIKKLKQKFDDL-----TAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQ 74
L+ +L++D L+++ K+ L + Q+E + K NL ++ L+Q + K+QQ
Sbjct: 320 LQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEK--NLFEEE--LKQTLDELDKLQQ 375
Query: 75 QCEK-------LEEDKKMLKEEILNLKTHMENNRVEISKLQ----EYKLELDEKAMQAVE 123
+ E+ LEE+ K EE+ L+ ++ E+ K + L L EK V+
Sbjct: 376 KEEQAERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQATLLLQEKYDSMVQ 435
Query: 124 KLEEIHLQME 133
LE++ Q E
Sbjct: 436 SLEDVTAQFE 445
Score = 33.1 bits (74), Expect = 0.11
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 31 IKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQC---EKLEEDKKMLK 87
++ LKQKF ++E L K L D+ + Q++ LS Q+ C E++ ++K + +
Sbjct: 303 MQNLKQKFILEQQEREKLQQK--ELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFE 360
Query: 88 EEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLE 126
EE+ ++ + + + + +L+E+A E+L+
Sbjct: 361 EELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELK 399
Score = 30.8 bits (68), Expect = 0.53
Identities = 26/135 (19%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEF------LSMKKV 72
DL+T+ KM+ + ++ L+A L + + L + N++L+ +F +++ +
Sbjct: 92 DLETELEKMEARLNAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRIL 151
Query: 73 QQQCEKLEEDKK------MLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLE 126
+ KL ++ M K+E + +K + +E S+ + +LE +++ + E
Sbjct: 152 SLELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDE 211
Query: 127 EIHLQMELDCVEQIT 141
+ + L+ +E+I+
Sbjct: 212 KSETEKLLEYIEEIS 226
Score = 29.6 bits (65), Expect = 1.2
Identities = 29/139 (20%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEK 78
+L+ L++ L K + K + A++E + K L + L++ + +++ +
Sbjct: 147 NLRILSLELMKLRNKRETKMRGMMAKQEGMEMK---LQVTQRSLEESQGKIAQLEGKLVS 203
Query: 79 LEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVE 138
+E++K K E L ++E ++++YKL++ + EK +EI L ++ E
Sbjct: 204 IEKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEI-LSLKQSLEE 262
Query: 139 QITRETKRIVAVLNTCSRL 157
I +K++ + C L
Sbjct: 263 NIVILSKQVEDLNVKCQLL 281
>gi|217416394 hyaluronan-mediated motility receptor isoform b [Homo
sapiens]
Length = 724
Score = 45.8 bits (107), Expect = 2e-05
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 12 EDFDCHGDLKTDQLKMDI--LIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEF-LS 68
E+ C D + ++ K+DI L + LK+K D++ + K++L V L+K + L + L
Sbjct: 238 EEISCASD-QVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLL 296
Query: 69 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
K+ + + E + L E+ NLK + E KLQ+ +L++D Q E +
Sbjct: 297 EKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSL 356
Query: 129 HLQM 132
H ++
Sbjct: 357 HQKL 360
Score = 34.7 bits (78), Expect = 0.036
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 69 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
++K + +LEE+ K +EIL+LK +E N V +SK E +L+ K Q +EK +E
Sbjct: 247 VEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVE---DLNVKC-QLLEKEKED 302
Query: 129 HLQMELDCVEQITRETKRI 147
H+ + E + E + +
Sbjct: 303 HVNRNREHNENLNAEMQNL 321
Score = 34.3 bits (77), Expect = 0.048
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 20/130 (15%)
Query: 20 LKTDQLKMDILIKKLKQKFDDL-----TAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQ 74
L+ +L++D L+++ K+ L + Q+E + K NL ++ L+Q + K+QQ
Sbjct: 335 LQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEK--NLFEEE--LKQTLDELDKLQQ 390
Query: 75 QCEK-------LEEDKKMLKEEILNLKTHMENNRVEISKLQ----EYKLELDEKAMQAVE 123
+ E+ LEE+ K EE+ L+ ++ E+ K + L L EK V+
Sbjct: 391 KEEQAERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQATLLLQEKYDSMVQ 450
Query: 124 KLEEIHLQME 133
LE++ Q E
Sbjct: 451 SLEDVTAQFE 460
Score = 33.1 bits (74), Expect = 0.11
Identities = 24/99 (24%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 31 IKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQC---EKLEEDKKMLK 87
++ LKQKF ++E L K L D+ + Q++ LS Q+ C E++ ++K + +
Sbjct: 318 MQNLKQKFILEQQEREKLQQK--ELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFE 375
Query: 88 EEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLE 126
EE+ ++ + + + + +L+E+A E+L+
Sbjct: 376 EELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELK 414
Score = 30.8 bits (68), Expect = 0.53
Identities = 26/135 (19%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEF------LSMKKV 72
DL+T+ KM+ + ++ L+A L + + L + N++L+ +F +++ +
Sbjct: 107 DLETELEKMEARLNAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRIL 166
Query: 73 QQQCEKLEEDKK------MLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLE 126
+ KL ++ M K+E + +K + +E S+ + +LE +++ + E
Sbjct: 167 SLELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDE 226
Query: 127 EIHLQMELDCVEQIT 141
+ + L+ +E+I+
Sbjct: 227 KSETEKLLEYIEEIS 241
Score = 29.6 bits (65), Expect = 1.2
Identities = 29/139 (20%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEK 78
+L+ L++ L K + K + A++E + K L + L++ + +++ +
Sbjct: 162 NLRILSLELMKLRNKRETKMRGMMAKQEGMEMK---LQVTQRSLEESQGKIAQLEGKLVS 218
Query: 79 LEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVE 138
+E++K K E L ++E ++++YKL++ + EK +EI L ++ E
Sbjct: 219 IEKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEI-LSLKQSLEE 277
Query: 139 QITRETKRIVAVLNTCSRL 157
I +K++ + C L
Sbjct: 278 NIVILSKQVEDLNVKCQLL 296
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 45.4 bits (106), Expect = 2e-05
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 32 KKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQE----FLSMKKVQQQCEKLEEDKKMLK 87
KKL Q+ D EA+++KC +L K Q LQ E + +++ C L++ ++
Sbjct: 1395 KKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDVERTNAACAALDKKQRNFD 1454
Query: 88 EEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVEQITRETKRI 147
+ + K E E+ Q+ L + + EE LD +E + RE K +
Sbjct: 1455 KILAEWKQKCEETHAELEASQKESRSLSTELFKIKNAYEE-----SLDQLETLKRENKNL 1509
Score = 42.0 bits (97), Expect = 2e-04
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 30/162 (18%)
Query: 16 CHGDLKTDQLKMDILIKKLKQKFDD-------LTAQKEALSSKCVNLAKDNQVLQQEFLS 68
C +KT +++++ IK++ ++ +D LTA+K L +C L KD L+ L+
Sbjct: 909 CDQLIKT-KIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLE---LT 964
Query: 69 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLE-- 126
+ KV+++ E K L EE+ L I+KL + K L E Q ++ L+
Sbjct: 965 LAKVEKEKHATENKVKNLTEEMAGLDE-------TIAKLTKEKKALQEAHQQTLDDLQAE 1017
Query: 127 ----------EIHLQMELDCVEQITRETKRIVAVLNTCSRLL 158
+I L+ ++D +E + K+I L R L
Sbjct: 1018 EDKVNTLTKAKIKLEQQVDDLEGSLEQEKKIRMDLERAKRKL 1059
Score = 38.9 bits (89), Expect = 0.002
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 20 LKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQ----Q 75
L Q D ++ + KQK ++ A+ EA K+++ L E +K + Q
Sbjct: 1446 LDKKQRNFDKILAEWKQKCEETHAELEASQ-------KESRSLSTELFKIKNAYEESLDQ 1498
Query: 76 CEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQME 133
E L+ + K L++EI +L + I +L++ K +++++ + LEE +E
Sbjct: 1499 LETLKRENKNLQQEISDLTEQIAEGGKRIHELEKIKKQVEQEKSELQAALEEAEASLE 1556
Score = 32.7 bits (73), Expect = 0.14
Identities = 12/49 (24%), Positives = 31/49 (63%)
Query: 87 KEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELD 135
++E+ N+K E + E++K + + EL+EK + +++ ++ LQ++ +
Sbjct: 850 EKEMANMKEEFEKTKEELAKTEAKRKELEEKMVTLMQEKNDLQLQVQAE 898
Score = 32.7 bits (73), Expect = 0.14
Identities = 25/103 (24%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 26 KMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQV-LQQEFLSMKKVQQQCEKLEEDKK 84
K + +K+++ ++ T Q EA ++ D+ L ++ ++++V+Q KLE++K
Sbjct: 1170 KREAEFQKMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQ---KLEKEKS 1226
Query: 85 MLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEE 127
+K EI +L ++ME L++ L+++ + K EE
Sbjct: 1227 EMKMEIDDLASNMETVSKAKGNLEKMCRALEDQLSEIKTKEEE 1269
Score = 31.2 bits (69), Expect = 0.40
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 18/140 (12%)
Query: 19 DLKTDQLKMDILIKK-------LKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKK 71
D++ D+ ++D +KK L+ K +D A L K L + L++E + +
Sbjct: 1072 DIENDKQQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERA 1131
Query: 72 VQQQCEK--------LEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ--- 120
+ + EK LEE + L+E +E N+ ++ Q+ + +L+E +Q
Sbjct: 1132 SRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATLQHEA 1191
Query: 121 AVEKLEEIHLQMELDCVEQI 140
L + H + EQI
Sbjct: 1192 TAATLRKKHADSVAELGEQI 1211
Score = 30.0 bits (66), Expect = 0.90
Identities = 19/99 (19%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 30 LIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEE 89
++K + DD +E L + + + +LQ E +++++ E+ E +K+ ++E
Sbjct: 1653 ILKDTQLHLDDALRSQEDLKEQLAMVERRANLLQAE---IEELRATLEQTERSRKIAEQE 1709
Query: 90 ILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
+L+ ++ + + L K +L+ Q ++E+I
Sbjct: 1710 LLDASERVQLLHTQNTSLINTKKKLETDISQIQGEMEDI 1748
Score = 27.7 bits (60), Expect = 4.5
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 74 QQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEK 117
Q+ E+LEE KK L + + + + H+E + + L++ K L +
Sbjct: 1385 QRTEELEEAKKKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNE 1428
Score = 27.3 bits (59), Expect = 5.8
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 35/147 (23%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKK------- 71
DL+ L+ + L++K D A+ L + NL + Q L++E MK
Sbjct: 1181 DLEEATLQHEATAATLRKKHADSVAE---LGEQIDNLQRVKQKLEKEKSEMKMEIDDLAS 1237
Query: 72 ----VQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQ-----------EYKLELDE 116
V + LE+ + L++++ +KT E + I+ L EY +LDE
Sbjct: 1238 NMETVSKAKGNLEKMCRALEDQLSEIKTKEEEQQRLINDLTAQRARLQTESGEYSRQLDE 1297
Query: 117 K---------AMQA-VEKLEEIHLQME 133
K QA +++EE+ Q+E
Sbjct: 1298 KDTLVSQLSRGKQAFTQQIEELKRQLE 1324
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 44.3 bits (103), Expect = 5e-05
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 32 KKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQE----FLSMKKVQQQCEKLEEDKKMLK 87
KKL Q+ + EA+++KC +L K Q LQ E L +++ C L++ ++
Sbjct: 1394 KKLAQRLQEAEEHVEAVNAKCASLEKTKQRLQNEVEDLMLDVERSNAACAALDKKQRNFD 1453
Query: 88 EEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVEQITRETKRI 147
+ + K E + E+ Q+ L + + EE LD +E + RE K +
Sbjct: 1454 KVLSEWKQKYEETQAELEASQKESRSLSTELFKVKNVYEE-----SLDQLETLRRENKNL 1508
Score = 43.1 bits (100), Expect = 1e-04
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 20 LKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQ----Q 75
L Q D ++ + KQK+++ A+ EA K+++ L E +K V + Q
Sbjct: 1445 LDKKQRNFDKVLSEWKQKYEETQAELEASQ-------KESRSLSTELFKVKNVYEESLDQ 1497
Query: 76 CEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQME 133
E L + K L++EI +L + +I +L++ K +++++ + LEE +E
Sbjct: 1498 LETLRRENKNLQQEISDLTEQIAEGGKQIHELEKIKKQVEQEKCEIQAALEEAEASLE 1555
Score = 37.7 bits (86), Expect = 0.004
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 22/132 (16%)
Query: 23 DQLKMDILIKKLKQKFDD-------LTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQ 75
++++++ IK++ ++ ++ LTA+K L +C L KD L+ L++ KV+++
Sbjct: 914 NKIQLEAKIKEVTERAEEEEEINAELTAKKRKLEDECSELKKDIDDLE---LTLAKVEKE 970
Query: 76 CEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELD 135
E K L EE+ L I+KL + K L E Q ++ LQ E D
Sbjct: 971 KHATENKVKNLTEEMAGLDE-------TIAKLSKEKKALQETHQQTLD-----DLQAEED 1018
Query: 136 CVEQITRETKRI 147
V +T+ ++
Sbjct: 1019 KVNILTKAKTKL 1030
Score = 35.0 bits (79), Expect = 0.028
Identities = 25/115 (21%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 19 DLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEK 78
+L+ + K++ +LK + DDL++ EA+S NL K + L+ + +K +++ ++
Sbjct: 1212 NLQRVKQKLEKEKSELKMETDDLSSNAEAISKAKGNLEKMCRSLEDQVSELKTKEEEQQR 1271
Query: 79 LEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQME 133
L D L + L+T ++ + +L + +++EE+ Q+E
Sbjct: 1272 LIND---LTAQRARLQTEAGEYSRQLDEKDALVSQLSRSKQASTQQIEELKHQLE 1323
Score = 30.4 bits (67), Expect = 0.69
Identities = 19/99 (19%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 30 LIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEE 89
++K+ + DD +E L + + + +LQ E ++++ E+ E +K+ ++E
Sbjct: 1652 ILKETQLHLDDALRGQEDLKEQLAIVERRANLLQAE---IEELWATLEQTERSRKIAEQE 1708
Query: 90 ILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI 128
+L+ ++ + + L K +L+ Q ++EE+
Sbjct: 1709 LLDASERVQLLHTQNTSLINTKKKLENDVSQLQSEVEEV 1747
Score = 28.1 bits (61), Expect = 3.4
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 18/140 (12%)
Query: 19 DLKTDQLKMDILIKK-------LKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKK 71
D++ D+ ++D ++K L K +D A + L K L + L +E + +
Sbjct: 1071 DMENDKQQLDEKLEKKEFEISNLISKIEDEQAVEIQLQKKIKELQARIEELGEEIEAERA 1130
Query: 72 VQQQCEK--------LEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ--- 120
+ + EK LEE + L+E +E N+ ++ Q+ + +L+E +Q
Sbjct: 1131 SRAKAEKQRSDLSRELEEISERLEEAGGATSAQVELNKKREAEFQKLRRDLEEATLQHEA 1190
Query: 121 AVEKLEEIHLQMELDCVEQI 140
V L + H + EQI
Sbjct: 1191 MVAALRKKHADSMAELGEQI 1210
Score = 27.7 bits (60), Expect = 4.5
Identities = 21/98 (21%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 20 LKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKL 79
L++ + D+L ++ +++ + + ALS +++V Q Q+ E+L
Sbjct: 1336 LQSSRHDCDLLREQYEEEQEGKAELQRALSKA------NSEVAQWRTKYETDAIQRTEEL 1389
Query: 80 EEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEK 117
EE KK L + + + H+E + + L++ K L +
Sbjct: 1390 EEAKKKLAQRLQEAEEHVEAVNAKCASLEKTKQRLQNE 1427
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 43.9 bits (102), Expect = 6e-05
Identities = 26/104 (25%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 26 KMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKM 85
++++L ++L++ D L A++E + +A+ +++++ +M V + + L E+K+
Sbjct: 1227 RVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTE-TMNVVMETNKMLREEKER 1285
Query: 86 LKEEILNLKTHMENNRVEISKLQEYKLELDEKA--MQAVEKLEE 127
L++++ ++ + ++I LQE EL EK+ +QA +KL E
Sbjct: 1286 LEQDLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKKLLE 1329
Score = 40.4 bits (93), Expect = 7e-04
Identities = 27/127 (21%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 32 KKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEIL 91
++ K ++++L AQ++ + + D+Q M+++++ + E K L+ ++
Sbjct: 1439 RRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLNQAETKSKSLESQVE 1498
Query: 92 NLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVEQIT-RETKRIVAV 150
NL+ + E LQE ++L + + + L++ Q E +QIT +E K A+
Sbjct: 1499 NLQKTLSEKETEARNLQEQTVQLQSELSRLRQDLQDRTTQEE-QLRQQITEKEEKTRKAI 1557
Query: 151 LNTCSRL 157
+ S++
Sbjct: 1558 VAAKSKI 1564
Score = 32.7 bits (73), Expect = 0.14
Identities = 24/114 (21%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Query: 33 KLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMK-KVQQQCEKLEEDKKMLKEEIL 91
+L+ K D+L A ++ + L ++ ++L + + +++ + ++L + EIL
Sbjct: 161 ELQLKLDELQASDVSVKYREKRLEQEKELLHSQNTWLNTELKTKTDELLALGREKGNEIL 220
Query: 92 NLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVEQITRETK 145
LK ++EN + E+S+L+E L + +E++ +++ +Q + E K
Sbjct: 221 ELKCNLENKKEEVSRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEK 274
Score = 30.0 bits (66), Expect = 0.90
Identities = 28/141 (19%), Positives = 57/141 (40%), Gaps = 31/141 (21%)
Query: 27 MDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKML 86
+D L+ +L+Q + + KE L + N+ + ++ S+ K +Q E++ ++ ++
Sbjct: 934 VDDLVSQLRQTEEQVNDLKERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVR 993
Query: 87 KEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEI------------------ 128
+E +T +E +E+ K K EL + +A+E +E+
Sbjct: 994 LKESAEFQTQLEKKLMEVEK---EKQELQDDKRRAIESMEQQLSELKKTLSSVQNEVQEA 1050
Query: 129 ----------HLQMELDCVEQ 139
Q DC EQ
Sbjct: 1051 LQRASTALSNEQQARRDCQEQ 1071
Score = 29.6 bits (65), Expect = 1.2
Identities = 23/125 (18%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 30 LIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEE 89
++K+ +++++ +LS K K+ Q LQ++ K +Q LE D + ++ +
Sbjct: 436 ILKRQREEYERAQKAVASLSVKLEQAMKEIQRLQED---TDKANKQSSVLERDNRRMEIQ 492
Query: 90 ILNLKTHMENNRVEISKLQEYKLELDEKAMQA-VEKLEEIHLQ--MELDCVEQITRETKR 146
+ +L + +E+ + + + DE+ A + E+ Q + +E++ ++ +R
Sbjct: 493 VKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQR 552
Query: 147 IVAVL 151
++ L
Sbjct: 553 LLVAL 557
Score = 29.3 bits (64), Expect = 1.5
Identities = 21/104 (20%), Positives = 44/104 (42%)
Query: 30 LIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEE 89
LI+ LK+ + + +KE + D Q + +KK+ ++ + E+ K +++
Sbjct: 1395 LIQSLKEDLNKVRTEKETIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEELKAQQDK 1454
Query: 90 ILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQME 133
++ + E + EL E QA K + + Q+E
Sbjct: 1455 VMETSAQSSGDHQEQHVSVQEMQELKETLNQAETKSKSLESQVE 1498
Score = 27.7 bits (60), Expect = 4.5
Identities = 21/112 (18%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 34 LKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNL 93
LK ++ K+ LS+ V +A +Q Q+ ++ + L + +E++ +L
Sbjct: 894 LKNAQKEIATLKQHLSNMEVQVA--SQSSQRTGKGQPSNKEDVDDLVSQLRQTEEQVNDL 951
Query: 94 KTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVEQITRETK 145
K ++ + + + Q L+E + + EE+ +E+ E +T+
Sbjct: 952 KERLKTSTSNVEQYQAMVTSLEESLNKEKQVTEEVRKNIEVRLKESAEFQTQ 1003
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 43.9 bits (102), Expect = 6e-05
Identities = 29/126 (23%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 24 QLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDK 83
+L D++ +++ +D T + + CV++ Q+ K+++ Q ++E+K
Sbjct: 107 KLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQI--------KELRDQIVSVQEEK 158
Query: 84 KMLKEEILNLKTHMENNRVEISKLQEYKLELDEK--------------AMQAVEKLEEIH 129
K+L E+ NLK+ + E++K+++ K L+ + +M AVE+ EE+
Sbjct: 159 KILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQ 218
Query: 130 LQMELD 135
+ +EL+
Sbjct: 219 VNLELE 224
Score = 31.2 bits (69), Expect = 0.40
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 58 DNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQE 109
+N+ L +E ++K QQ E LEEDKK L+ + N + N + + +LQ+
Sbjct: 295 ENETLHKEIHNLK---QQLELLEEDKKELELKYQNSEEKARNLKHSVDELQK 343
Score = 29.6 bits (65), Expect = 1.2
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 3 INMLNVFGNEDFDCHGDLKTDQLK--------MDILIKKLKQKFDDLTAQKEALSSKCVN 54
++ML V E+ + +L+ D K M I KLK++ L Q + +
Sbjct: 206 VSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQ-SHLLLQSSIPDQQLLK 264
Query: 55 LAKDNQVLQQEFLSMK-KVQQQCEKLEE--DKKMLKEEILNLKTHMENNRVEISKLQEYK 111
+N L Q+ + + QQ+ ++LEE + + L +EI NLK +E L+E K
Sbjct: 265 ALDENAKLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLE-------LLEEDK 317
Query: 112 LELDEKAMQAVEKLEEI 128
EL+ K + EK +
Sbjct: 318 KELELKYQNSEEKARNL 334
>gi|50511340 shootin1 isoform b [Homo sapiens]
Length = 456
Score = 43.9 bits (102), Expect = 6e-05
Identities = 29/126 (23%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 24 QLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDK 83
+L D++ +++ +D T + + CV++ Q+ K+++ Q ++E+K
Sbjct: 107 KLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQI--------KELRDQIVSVQEEK 158
Query: 84 KMLKEEILNLKTHMENNRVEISKLQEYKLELDEK--------------AMQAVEKLEEIH 129
K+L E+ NLK+ + E++K+++ K L+ + +M AVE+ EE+
Sbjct: 159 KILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQ 218
Query: 130 LQMELD 135
+ +EL+
Sbjct: 219 VNLELE 224
Score = 31.2 bits (69), Expect = 0.40
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 58 DNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQE 109
+N+ L +E ++K QQ E LEEDKK L+ + N + N + + +LQ+
Sbjct: 295 ENETLHKEIHNLK---QQLELLEEDKKELELKYQNSEEKARNLKHSVDELQK 343
Score = 29.6 bits (65), Expect = 1.2
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 3 INMLNVFGNEDFDCHGDLKTDQLK--------MDILIKKLKQKFDDLTAQKEALSSKCVN 54
++ML V E+ + +L+ D K M I KLK++ L Q + +
Sbjct: 206 VSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQ-SHLLLQSSIPDQQLLK 264
Query: 55 LAKDNQVLQQEFLSMK-KVQQQCEKLEE--DKKMLKEEILNLKTHMENNRVEISKLQEYK 111
+N L Q+ + + QQ+ ++LEE + + L +EI NLK +E L+E K
Sbjct: 265 ALDENAKLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLE-------LLEEDK 317
Query: 112 LELDEKAMQAVEKLEEI 128
EL+ K + EK +
Sbjct: 318 KELELKYQNSEEKARNL 334
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 43.5 bits (101), Expect = 8e-05
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 2 TINMLNVFGNEDFDCHGDLKTD-QLKMDILIK----KLKQKFD---DLTAQKEALSSKCV 53
++N LN NE + L + K ++L+ K Q+ D L + AL K
Sbjct: 622 SVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQDKQQ 681
Query: 54 NLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLE 113
L K L Q ++ Q+ C +LE K KE+ L+L+ E +I KL+ LE
Sbjct: 682 ELNKITTQLDQVTAKLQDKQEHCSQLESHLKEYKEKYLSLEQKTEELEGQIKKLEADSLE 741
Query: 114 L---DEKAMQAVEKLEEIHLQMELDCVE 138
+ E+A+Q +++ +++ +EL E
Sbjct: 742 VKASKEQALQDLQQQRQLNTDLELRATE 769
Score = 38.9 bits (89), Expect = 0.002
Identities = 24/117 (20%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 20 LKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEF----LSMKKVQQQ 75
L + LK + KL++K ++ + K+ + + D Q LQ S+ ++ +
Sbjct: 307 LTENLLKKEQDYTKLEEKHNEESVSKKNIQATLHQKDLDCQQLQSRLSASETSLHRIHVE 366
Query: 76 CEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQM 132
+ E + LKEE+ ++T ++ + E +LQ+ + E ++ +Q ++ ++H ++
Sbjct: 367 LSEKGEATQKLKEELSEVETKYQHLKAEFKQLQQQREEKEQHGLQLQSEINQLHSKL 423
Score = 37.7 bits (86), Expect = 0.004
Identities = 27/120 (22%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 31 IKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQ----QEFLSMKKVQQQCEKLEEDKKML 86
++KLK ++LT + + L+ + +D L+ +E +S K +Q + + D + L
Sbjct: 290 LQKLKSSVNELTQKNQTLTENLLKKEQDYTKLEEKHNEESVSKKNIQATLHQKDLDCQQL 349
Query: 87 KEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMELDCVEQITRETKR 146
+ + +T + VE+S+ E +L E+ + K + HL+ E ++Q E ++
Sbjct: 350 QSRLSASETSLHRIHVELSEKGEATQKLKEELSEVETKYQ--HLKAEFKQLQQQREEKEQ 407
Score = 37.0 bits (84), Expect = 0.007
Identities = 30/115 (26%), Positives = 64/115 (55%), Gaps = 21/115 (18%)
Query: 12 EDFDCHGDLKTD-QLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMK 70
+D L TD +L+ L K+L+ +KE +SS ++L K ++ L+
Sbjct: 751 QDLQQQRQLNTDLELRATELSKQLEM-------EKEIVSSTRLDLQKKSEALES------ 797
Query: 71 KVQQQCEKLEEDKKMLKE--EILNLKTHME----NNRVEISKLQEYKLELDEKAM 119
++Q+ K EE+K++LK+ E L+ +T ++ NNR++ + + K++++++A+
Sbjct: 798 -IKQKLTKQEEEKQILKQDFETLSQETKIQHEELNNRIQTTVTELQKVKMEKEAL 851
Score = 36.2 bits (82), Expect = 0.013
Identities = 25/127 (19%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 18 GDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCV----------NLAKDNQVLQQEFL 67
GD ++ L++K K+ L ++E L +K L + N LQ++
Sbjct: 519 GDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAGEGETAVLNQLQEKNHTLQEQVT 578
Query: 68 SM-KKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLE 126
+ +K++ Q E ++ ++ L +++ K H+ + + L+ EL+ + ++ EK+
Sbjct: 579 QLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLETSVNELNSQLNESKEKVS 638
Query: 127 EIHLQME 133
++ +Q++
Sbjct: 639 QLDIQIK 645
Score = 32.3 bits (72), Expect = 0.18
Identities = 30/131 (22%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 24 QLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLS-MKKVQQQCEKLEED 82
QLK+ L ++LK+K + T + L K ++ Q LQQ + +++ Q E++
Sbjct: 459 QLKLSRLEEQLKEKVTNSTELQHQL-DKTKQQHQEQQALQQSTTAKLREAQNDLEQVLRQ 517
Query: 83 KKMLKEEILNLKTHMENNRVEISKLQE------YKLELDEKAMQAVEKLEEIHLQMELDC 136
++I NL+ ++ ++ IS L++ K++ E + +L+E + ++
Sbjct: 518 IGDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAGEGETAVLNQLQEKNHTLQ--- 574
Query: 137 VEQITRETKRI 147
EQ+T+ T+++
Sbjct: 575 -EQVTQLTEKL 584
Score = 31.2 bits (69), Expect = 0.40
Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 31 IKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLE--EDKKMLKE 88
I +K K+D+ + +EA K L ++ L +E ++ ++ + + ED +LK+
Sbjct: 172 IADIKSKYDEERSLREAAEQKVTRLTEE---LNKEATVIQDLKTELLQRPGIEDVAVLKK 228
Query: 89 EILNLKTHMENNRVEISKLQEYKLELDEKAMQA 121
E++ ++T M+N +E + E KL+ + K +Q+
Sbjct: 229 ELVQVQTLMDNMTLERERESE-KLKDECKKLQS 260
Score = 29.3 bits (64), Expect = 1.5
Identities = 23/97 (23%), Positives = 47/97 (48%)
Query: 24 QLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDK 83
Q++M+ +K+ K+ L +KEA + L + L Q ++K+ +++ ++L+ +
Sbjct: 902 QVQMENTLKEQKELKKSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQGNI 961
Query: 84 KMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
LK+ K +E + E+ K EL+ K Q
Sbjct: 962 NELKQSSEQKKKQIEALQGELKIAVLQKTELENKLQQ 998
Score = 27.3 bits (59), Expect = 5.8
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 31 IKKLKQKFDDLTAQKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEI 90
I +LKQ + Q EAL + + +A VLQ+ L K+QQQ + ++ KE+I
Sbjct: 961 INELKQSSEQKKKQIEALQGE-LKIA----VLQKTELE-NKLQQQLTQAAQELAAEKEKI 1014
Query: 91 LNLKTHMENNRVEISKLQEYKLELDEKAMQAVEKLEEIHLQMEL 134
L+ + E ++ +LQ + + + + L+ + ++ L
Sbjct: 1015 SVLQNNYEKSQETFKQLQSDFYGRESELLATRQDLKSVEEKLSL 1058
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,050,911
Number of Sequences: 37866
Number of extensions: 207733
Number of successful extensions: 4401
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 509
Number of HSP's that attempted gapping in prelim test: 2047
Number of HSP's gapped (non-prelim): 2420
length of query: 161
length of database: 18,247,518
effective HSP length: 94
effective length of query: 67
effective length of database: 14,688,114
effective search space: 984103638
effective search space used: 984103638
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.