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Search of human proteins with 14916485
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14916485 caspase 6 isoform beta [Homo sapiens]
(204 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14916485 caspase 6 isoform beta [Homo sapiens] 421 e-118
gi|14916483 caspase 6 isoform alpha preproprotein [Homo sapiens] 396 e-111
gi|14790115 caspase 3 preproprotein [Homo sapiens] 162 1e-40
gi|14790119 caspase 3 preproprotein [Homo sapiens] 162 1e-40
gi|15718698 caspase 7 isoform delta [Homo sapiens] 154 5e-38
gi|15718700 caspase 7 isoform alpha [Homo sapiens] 154 5e-38
gi|4502581 caspase 7 isoform alpha precursor [Homo sapiens] 154 5e-38
gi|122056476 caspase 8 isoform G precursor [Homo sapiens] 102 3e-22
gi|122056474 caspase 8 isoform C precursor [Homo sapiens] 102 3e-22
gi|15718708 caspase 8 isoform C precursor [Homo sapiens] 102 3e-22
gi|15718706 caspase 8 isoform B precursor [Homo sapiens] 102 3e-22
gi|15718704 caspase 8 isoform A precursor [Homo sapiens] 102 3e-22
gi|47078272 caspase 10 isoform d preproprotein [Homo sapiens] 99 2e-21
gi|47078267 caspase 10 isoform a preproprotein [Homo sapiens] 99 2e-21
gi|47078269 caspase 10 isoform b preproprotein [Homo sapiens] 88 6e-18
gi|14790124 caspase 9 isoform alpha preproprotein [Homo sapiens] 84 6e-17
gi|39995059 caspase 2 isoform 1 preproprotein [Homo sapiens] 83 1e-16
gi|6912286 caspase 14 precursor [Homo sapiens] 72 3e-13
gi|239756464 PREDICTED: hypothetical protein LOC197350 [Homo sap... 65 3e-11
gi|169210653 PREDICTED: hypothetical protein LOC197350 [Homo sap... 65 3e-11
gi|209870079 caspase 5 isoform f precursor [Homo sapiens] 54 7e-08
gi|209870075 caspase 5 isoform d [Homo sapiens] 54 7e-08
gi|209870073 caspase 5 isoform c [Homo sapiens] 54 7e-08
gi|209870071 caspase 5 isoform b precursor [Homo sapiens] 54 7e-08
gi|209870069 caspase 5 isoform a precursor [Homo sapiens] 54 7e-08
gi|15451910 caspase 4 isoform gamma precursor [Homo sapiens] 51 6e-07
gi|4502577 caspase 4 isoform alpha precursor [Homo sapiens] 51 6e-07
gi|187608577 CASP8 and FADD-like apoptosis regulator isoform 1 [... 50 2e-06
gi|187608571 CASP8 and FADD-like apoptosis regulator isoform 1 [... 50 2e-06
gi|15431330 caspase 1 isoform gamma precursor [Homo sapiens] 49 2e-06
>gi|14916485 caspase 6 isoform beta [Homo sapiens]
Length = 204
Score = 421 bits (1083), Expect = e-118
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MSSASGLRRGHPAVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCH 60
MSSASGLRRGHPAVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCH
Sbjct: 1 MSSASGLRRGHPAVSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCH 60
Query: 61 SLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMC 120
SLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMC
Sbjct: 61 SLVGKPKIFIIQACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMC 120
Query: 121 YSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSA 180
YSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSA
Sbjct: 121 YSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSA 180
Query: 181 IGKKQVPCFASMLTKKLHFFPKSN 204
IGKKQVPCFASMLTKKLHFFPKSN
Sbjct: 181 IGKKQVPCFASMLTKKLHFFPKSN 204
>gi|14916483 caspase 6 isoform alpha preproprotein [Homo sapiens]
Length = 293
Score = 396 bits (1017), Expect = e-111
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 14 VSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQA 73
VSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQA
Sbjct: 103 VSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQA 162
Query: 74 CRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRET 133
CRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRET
Sbjct: 163 CRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRET 222
Query: 134 VNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASML 193
VNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASML
Sbjct: 223 VNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASML 282
Query: 194 TKKLHFFPKSN 204
TKKLHFFPKSN
Sbjct: 283 TKKLHFFPKSN 293
Score = 32.7 bits (73), Expect = 0.22
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 1 MSSASGLRRGHPAVSTVSHADADCF 25
MSSASGLRRGHPA + + D F
Sbjct: 1 MSSASGLRRGHPAGGEENMTETDAF 25
>gi|14790115 caspase 3 preproprotein [Homo sapiens]
Length = 277
Score = 162 bits (411), Expect = 1e-40
Identities = 83/187 (44%), Positives = 110/187 (58%), Gaps = 13/187 (6%)
Query: 14 VSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQA 73
VS H+ FVCV LSHGE I+ + ++++ +T F+GD+C SL GKPK+FIIQA
Sbjct: 103 VSKEDHSKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQA 162
Query: 74 CRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRET 133
CRG + D + VD D + + +P ADFL YS A GYYS R +
Sbjct: 163 CRGTELDCGIETDSGVD-------------DDMACHKIPVEADFLYAYSTAPGYYSWRNS 209
Query: 134 VNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASML 193
+GSW+IQ LC ML +Y LEF +LT VNRKV+ F D + KKQ+PC SML
Sbjct: 210 KDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQIPCIVSML 269
Query: 194 TKKLHFF 200
TK+L+F+
Sbjct: 270 TKELYFY 276
>gi|14790119 caspase 3 preproprotein [Homo sapiens]
Length = 277
Score = 162 bits (411), Expect = 1e-40
Identities = 83/187 (44%), Positives = 110/187 (58%), Gaps = 13/187 (6%)
Query: 14 VSTVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQA 73
VS H+ FVCV LSHGE I+ + ++++ +T F+GD+C SL GKPK+FIIQA
Sbjct: 103 VSKEDHSKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQA 162
Query: 74 CRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRET 133
CRG + D + VD D + + +P ADFL YS A GYYS R +
Sbjct: 163 CRGTELDCGIETDSGVD-------------DDMACHKIPVEADFLYAYSTAPGYYSWRNS 209
Query: 134 VNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASML 193
+GSW+IQ LC ML +Y LEF +LT VNRKV+ F D + KKQ+PC SML
Sbjct: 210 KDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKKQIPCIVSML 269
Query: 194 TKKLHFF 200
TK+L+F+
Sbjct: 270 TKELYFY 276
>gi|15718698 caspase 7 isoform delta [Homo sapiens]
Length = 336
Score = 154 bits (389), Expect = 5e-38
Identities = 79/185 (42%), Positives = 106/185 (57%), Gaps = 10/185 (5%)
Query: 15 STVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC 74
S H +A CF C+ LSHGE N IY D I+ LT F+GD+C +L+ KPK+F IQAC
Sbjct: 160 SEEDHTNAACFACILLSHGEENVIYGKDGVTPIKDLTAHFRGDRCKTLLEKPKLFFIQAC 219
Query: 75 RGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETV 134
RG + +D+ + I + DA Y +P ADFL YS GYYS R
Sbjct: 220 RGTE----------LDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRSPG 269
Query: 135 NGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLT 194
GSW++Q LC +L ++G LE ++LT VN +V++ DP KKQ+PC SMLT
Sbjct: 270 RGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIPCVVSMLT 329
Query: 195 KKLHF 199
K+L+F
Sbjct: 330 KELYF 334
>gi|15718700 caspase 7 isoform alpha [Homo sapiens]
Length = 303
Score = 154 bits (389), Expect = 5e-38
Identities = 79/185 (42%), Positives = 106/185 (57%), Gaps = 10/185 (5%)
Query: 15 STVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC 74
S H +A CF C+ LSHGE N IY D I+ LT F+GD+C +L+ KPK+F IQAC
Sbjct: 127 SEEDHTNAACFACILLSHGEENVIYGKDGVTPIKDLTAHFRGDRCKTLLEKPKLFFIQAC 186
Query: 75 RGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETV 134
RG + +D+ + I + DA Y +P ADFL YS GYYS R
Sbjct: 187 RGTE----------LDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRSPG 236
Query: 135 NGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLT 194
GSW++Q LC +L ++G LE ++LT VN +V++ DP KKQ+PC SMLT
Sbjct: 237 RGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIPCVVSMLT 296
Query: 195 KKLHF 199
K+L+F
Sbjct: 297 KELYF 301
>gi|4502581 caspase 7 isoform alpha precursor [Homo sapiens]
Length = 303
Score = 154 bits (389), Expect = 5e-38
Identities = 79/185 (42%), Positives = 106/185 (57%), Gaps = 10/185 (5%)
Query: 15 STVSHADADCFVCVFLSHGEGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQAC 74
S H +A CF C+ LSHGE N IY D I+ LT F+GD+C +L+ KPK+F IQAC
Sbjct: 127 SEEDHTNAACFACILLSHGEENVIYGKDGVTPIKDLTAHFRGDRCKTLLEKPKLFFIQAC 186
Query: 75 RGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETV 134
RG + +D+ + I + DA Y +P ADFL YS GYYS R
Sbjct: 187 RGTE----------LDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRSPG 236
Query: 135 NGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLT 194
GSW++Q LC +L ++G LE ++LT VN +V++ DP KKQ+PC SMLT
Sbjct: 237 RGSWFVQALCSILEEHGKDLEIMQILTRVNDRVARHFESQSDDPHFHEKKQIPCVVSMLT 296
Query: 195 KKLHF 199
K+L+F
Sbjct: 297 KELYF 301
>gi|122056476 caspase 8 isoform G precursor [Homo sapiens]
Length = 538
Score = 102 bits (253), Expect = 3e-22
Identities = 70/189 (37%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 17 VSHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQACR 75
+ H++ DCF+C LSHG+ IY D + I LT F G KC SL GKPK+F IQAC+
Sbjct: 361 MDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQ 420
Query: 76 GN--QHDVPVIPLDVVDNQTEKLDTNITEVDAASVYT--LPAGADFLMCYSVAEGYYSHR 131
G+ Q +PV +T+ + E+D +S T +P ADFL+ + S+R
Sbjct: 421 GDNYQKGIPV--------ETDSEEQPYLEMDLSSPQTRYIPDEADFLLGMATVNNCVSYR 472
Query: 132 ETVNGSWYIQDLCEML-GKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFA 190
G+WYIQ LC+ L + + +LT VN +VS KD KQ+P
Sbjct: 473 NPAEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSN------KDDKKNMGKQMPQPT 526
Query: 191 SMLTKKLHF 199
L KKL F
Sbjct: 527 FTLRKKLVF 535
>gi|122056474 caspase 8 isoform C precursor [Homo sapiens]
Length = 464
Score = 102 bits (253), Expect = 3e-22
Identities = 70/189 (37%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 17 VSHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQACR 75
+ H++ DCF+C LSHG+ IY D + I LT F G KC SL GKPK+F IQAC+
Sbjct: 287 MDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQ 346
Query: 76 GN--QHDVPVIPLDVVDNQTEKLDTNITEVDAASVYT--LPAGADFLMCYSVAEGYYSHR 131
G+ Q +PV +T+ + E+D +S T +P ADFL+ + S+R
Sbjct: 347 GDNYQKGIPV--------ETDSEEQPYLEMDLSSPQTRYIPDEADFLLGMATVNNCVSYR 398
Query: 132 ETVNGSWYIQDLCEML-GKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFA 190
G+WYIQ LC+ L + + +LT VN +VS KD KQ+P
Sbjct: 399 NPAEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSN------KDDKKNMGKQMPQPT 452
Query: 191 SMLTKKLHF 199
L KKL F
Sbjct: 453 FTLRKKLVF 461
>gi|15718708 caspase 8 isoform C precursor [Homo sapiens]
Length = 464
Score = 102 bits (253), Expect = 3e-22
Identities = 70/189 (37%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 17 VSHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQACR 75
+ H++ DCF+C LSHG+ IY D + I LT F G KC SL GKPK+F IQAC+
Sbjct: 287 MDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQ 346
Query: 76 GN--QHDVPVIPLDVVDNQTEKLDTNITEVDAASVYT--LPAGADFLMCYSVAEGYYSHR 131
G+ Q +PV +T+ + E+D +S T +P ADFL+ + S+R
Sbjct: 347 GDNYQKGIPV--------ETDSEEQPYLEMDLSSPQTRYIPDEADFLLGMATVNNCVSYR 398
Query: 132 ETVNGSWYIQDLCEML-GKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFA 190
G+WYIQ LC+ L + + +LT VN +VS KD KQ+P
Sbjct: 399 NPAEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSN------KDDKKNMGKQMPQPT 452
Query: 191 SMLTKKLHF 199
L KKL F
Sbjct: 453 FTLRKKLVF 461
>gi|15718706 caspase 8 isoform B precursor [Homo sapiens]
Length = 479
Score = 102 bits (253), Expect = 3e-22
Identities = 70/189 (37%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 17 VSHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQACR 75
+ H++ DCF+C LSHG+ IY D + I LT F G KC SL GKPK+F IQAC+
Sbjct: 302 MDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQ 361
Query: 76 GN--QHDVPVIPLDVVDNQTEKLDTNITEVDAASVYT--LPAGADFLMCYSVAEGYYSHR 131
G+ Q +PV +T+ + E+D +S T +P ADFL+ + S+R
Sbjct: 362 GDNYQKGIPV--------ETDSEEQPYLEMDLSSPQTRYIPDEADFLLGMATVNNCVSYR 413
Query: 132 ETVNGSWYIQDLCEML-GKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFA 190
G+WYIQ LC+ L + + +LT VN +VS KD KQ+P
Sbjct: 414 NPAEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSN------KDDKKNMGKQMPQPT 467
Query: 191 SMLTKKLHF 199
L KKL F
Sbjct: 468 FTLRKKLVF 476
>gi|15718704 caspase 8 isoform A precursor [Homo sapiens]
Length = 496
Score = 102 bits (253), Expect = 3e-22
Identities = 70/189 (37%), Positives = 96/189 (50%), Gaps = 20/189 (10%)
Query: 17 VSHADADCFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQACR 75
+ H++ DCF+C LSHG+ IY D + I LT F G KC SL GKPK+F IQAC+
Sbjct: 319 MDHSNMDCFICCILSHGDKGIIYGTDGQEAPIYELTSQFTGLKCPSLAGKPKVFFIQACQ 378
Query: 76 GN--QHDVPVIPLDVVDNQTEKLDTNITEVDAASVYT--LPAGADFLMCYSVAEGYYSHR 131
G+ Q +PV +T+ + E+D +S T +P ADFL+ + S+R
Sbjct: 379 GDNYQKGIPV--------ETDSEEQPYLEMDLSSPQTRYIPDEADFLLGMATVNNCVSYR 430
Query: 132 ETVNGSWYIQDLCEML-GKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFA 190
G+WYIQ LC+ L + + +LT VN +VS KD KQ+P
Sbjct: 431 NPAEGTWYIQSLCQSLRERCPRGDDILTILTEVNYEVSN------KDDKKNMGKQMPQPT 484
Query: 191 SMLTKKLHF 199
L KKL F
Sbjct: 485 FTLRKKLVF 493
>gi|47078272 caspase 10 isoform d preproprotein [Homo sapiens]
Length = 522
Score = 99.4 bits (246), Expect = 2e-21
Identities = 71/184 (38%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 18 SHADADCFVCVFLSHGEGNHIYAYD-AKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRG 76
+HAD DCFV L+HG +Y+ D A I I+ + F +C L KPK+F IQAC+G
Sbjct: 344 AHADGDCFVFCILTHGRFGAVYSSDEALIPIREIMSHFTALQCPRLAEKPKLFFIQACQG 403
Query: 77 NQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNG 136
+ P + ++ E+ T++ + ++PA ADFL+ + GY S R G
Sbjct: 404 EEIQ-PSVSIEADALNPEQAPTSLQD-------SIPAEADFLLGLATVPGYVSFRHVEEG 455
Query: 137 SWYIQDLCEMLGKYGSSLE-FTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTK 195
SWYIQ LC L K E +LT VN VS RRVD KKQ+P A L K
Sbjct: 456 SWYIQSLCNHLKKLVPRHEDILSILTAVNDDVS-RRVD-----KQGTKKQMPQPAFTLRK 509
Query: 196 KLHF 199
KL F
Sbjct: 510 KLVF 513
>gi|47078267 caspase 10 isoform a preproprotein [Homo sapiens]
Length = 479
Score = 99.4 bits (246), Expect = 2e-21
Identities = 71/184 (38%), Positives = 94/184 (51%), Gaps = 16/184 (8%)
Query: 18 SHADADCFVCVFLSHGEGNHIYAYD-AKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRG 76
+HAD DCFV L+HG +Y+ D A I I+ + F +C L KPK+F IQAC+G
Sbjct: 301 AHADGDCFVFCILTHGRFGAVYSSDEALIPIREIMSHFTALQCPRLAEKPKLFFIQACQG 360
Query: 77 NQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNG 136
+ P + ++ E+ T++ + ++PA ADFL+ + GY S R G
Sbjct: 361 EEIQ-PSVSIEADALNPEQAPTSLQD-------SIPAEADFLLGLATVPGYVSFRHVEEG 412
Query: 137 SWYIQDLCEMLGKYGSSLE-FTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTK 195
SWYIQ LC L K E +LT VN VS RRVD KKQ+P A L K
Sbjct: 413 SWYIQSLCNHLKKLVPRHEDILSILTAVNDDVS-RRVD-----KQGTKKQMPQPAFTLRK 466
Query: 196 KLHF 199
KL F
Sbjct: 467 KLVF 470
>gi|47078269 caspase 10 isoform b preproprotein [Homo sapiens]
Length = 521
Score = 87.8 bits (216), Expect = 6e-18
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 9/133 (6%)
Query: 18 SHADADCFVCVFLSHGEGNHIYAYD-AKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRG 76
+HAD DCFV L+HG +Y+ D A I I+ + F +C L KPK+F IQAC+G
Sbjct: 344 AHADGDCFVFCILTHGRFGAVYSSDEALIPIREIMSHFTALQCPRLAEKPKLFFIQACQG 403
Query: 77 NQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNG 136
+ P + ++ E+ T++ + ++PA ADFL+ + GY S R G
Sbjct: 404 EEIQ-PSVSIEADALNPEQAPTSLQD-------SIPAEADFLLGLATVPGYVSFRHVEEG 455
Query: 137 SWYIQDLCEMLGK 149
SWYIQ LC L K
Sbjct: 456 SWYIQSLCNHLKK 468
>gi|14790124 caspase 9 isoform alpha preproprotein [Homo sapiens]
Length = 416
Score = 84.3 bits (207), Expect = 6e-17
Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 33/202 (16%)
Query: 19 HADADCFVCVFLSHG-EGNH------IYAYDA-KIEIQTLTGLFKGDKCHSLVGKPKIFI 70
H DC V V LSHG + +H +Y D + ++ + +F G C SL GKPK+F
Sbjct: 224 HGALDCCVVVILSHGCQASHLQFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFF 283
Query: 71 IQACRGNQHD-----VPVIPLDVVDNQTEKLDT--------NITEVDAASVYTLPAGADF 117
IQAC G Q D P D + D ++DA S +LP +D
Sbjct: 284 IQACGGEQKDHGFEVASTSPEDESPGSNPEPDATPFQEGLRTFDQLDAIS--SLPTPSDI 341
Query: 118 LMCYSVAEGYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKD 177
+ YS G+ S R+ +GSWY++ L ++ ++ S + LL V VS + +
Sbjct: 342 FVSYSTFPGFVSWRDPKSGSWYVETLDDIFEQWAHSEDLQSLLLRVANAVSVKGI----- 396
Query: 178 PSAIGKKQVPCFASMLTKKLHF 199
KQ+P + L KKL F
Sbjct: 397 -----YKQMPGCFNFLRKKLFF 413
>gi|39995059 caspase 2 isoform 1 preproprotein [Homo sapiens]
Length = 452
Score = 83.2 bits (204), Expect = 1e-16
Identities = 56/189 (29%), Positives = 85/189 (44%), Gaps = 9/189 (4%)
Query: 18 SHADADCFVCVFLSHGEGNHIYAYDAKI-EIQTLTGLFKGDKCHSLVGKPKIFIIQACRG 76
+H D + LSHG IY D K+ ++Q + LF C SL KPK+F IQACRG
Sbjct: 263 AHRVTDSCIVALLSHGVEGAIYGVDGKLLQLQEVFQLFDNANCPSLQNKPKMFFIQACRG 322
Query: 77 NQHDVPVIPLDVVDNQTEKLDTNITEVDAAS----VYTLPAGADFLMCYSVAEGYYSHRE 132
++ D V D D + E DA LP +D + Y+ +G + R
Sbjct: 323 DETDRGV---DQQDGKNHAGSPGCEESDAGKEKLPKMRLPTRSDMICGYACLKGTAAMRN 379
Query: 133 TVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASM 192
T GSWYI+ L ++ + + ++L VN + R + K++ + S
Sbjct: 380 TKRGSWYIEALAQVFSERACDMHVADMLVKVNALIKDRE-GYAPGTEFHRCKEMSEYCST 438
Query: 193 LTKKLHFFP 201
L + L+ FP
Sbjct: 439 LCRHLYLFP 447
>gi|6912286 caspase 14 precursor [Homo sapiens]
Length = 242
Score = 72.0 bits (175), Expect = 3e-13
Identities = 54/176 (30%), Positives = 83/176 (47%), Gaps = 17/176 (9%)
Query: 24 CFVCVFLSHGEGNHIYAYDAK-IEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDVP 82
C V ++HG + D + ++++ L C +L KPK++IIQACRG Q D
Sbjct: 81 CAFVVLMAHGREGFLKGEDGEMVKLENLFEALNNKNCQALRAKPKVYIIQACRGEQRD-- 138
Query: 83 VIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRETVNGSWYIQD 142
P + V I V S T+P D L YS EGY ++R GS +IQ
Sbjct: 139 --PGETVGGD------EIVMVIKDSPQTIPTYTDALHVYSTVEGYIAYRHDQKGSCFIQT 190
Query: 143 LCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASMLTKKLH 198
L ++ K + ELLT V R++++ + ++ A +K P S L K+L+
Sbjct: 191 LVDVFTKRKGHI--LELLTEVTRRMAE--AELVQEGKA--RKTNPEIQSTLRKRLY 240
>gi|239756464 PREDICTED: hypothetical protein LOC197350 [Homo
sapiens]
Length = 432
Score = 65.5 bits (158), Expect = 3e-11
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 23/167 (13%)
Query: 24 CFVCVFLSHG--EGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDV 81
C + ++HG G + A +++ + L + + +C L G+PKIF++QACRG D
Sbjct: 244 CALVALMAHGGPRGQLLGADGQEVQPEAL--MQELSRCQVLQGRPKIFLLQACRGGNRDA 301
Query: 82 PVIPLDV------------VDNQTEKLDTNITEVDAASVYTLPAG----ADFLMCYSVAE 125
V P + V + + L E +S P G AD L YS AE
Sbjct: 302 GVGPTALPWYWSWLRAPPSVPSHADVLQI-YAEAQGSSCRGTPPGSSDQADILTVYSAAE 360
Query: 126 GYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRV 172
GY ++R+ GS +IQ L E+L + + ELLT VNR+V ++ V
Sbjct: 361 GYVAYRDD-KGSDFIQTLVEVL-RANPGRDLLELLTEVNRRVCEQEV 405
>gi|169210653 PREDICTED: hypothetical protein LOC197350 [Homo
sapiens]
Length = 432
Score = 65.5 bits (158), Expect = 3e-11
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 23/167 (13%)
Query: 24 CFVCVFLSHG--EGNHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACRGNQHDV 81
C + ++HG G + A +++ + L + + +C L G+PKIF++QACRG D
Sbjct: 244 CALVALMAHGGPRGQLLGADGQEVQPEAL--MQELSRCQVLQGRPKIFLLQACRGGNRDA 301
Query: 82 PVIPLDV------------VDNQTEKLDTNITEVDAASVYTLPAG----ADFLMCYSVAE 125
V P + V + + L E +S P G AD L YS AE
Sbjct: 302 GVGPTALPWYWSWLRAPPSVPSHADVLQI-YAEAQGSSCRGTPPGSSDQADILTVYSAAE 360
Query: 126 GYYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRV 172
GY ++R+ GS +IQ L E+L + + ELLT VNR+V ++ V
Sbjct: 361 GYVAYRDD-KGSDFIQTLVEVL-RANPGRDLLELLTEVNRRVCEQEV 405
>gi|209870079 caspase 5 isoform f precursor [Homo sapiens]
Length = 447
Score = 54.3 bits (129), Expect = 7e-08
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 19 HADADCFVCVFLSHG--EGNHIYAYDAK----IEIQTLTGLFKGDKCHSLVGKPKIFIIQ 72
H +D V +SHG EG A+ K + T+ +F C SL KPK+ I+Q
Sbjct: 267 HKSSDSTFLVLMSHGILEGICGTAHKKKKPDVLLYDTIFQIFNNRNCLSLKDKPKVIIVQ 326
Query: 73 ACRGNQH------DVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEG 126
ACRG +H D P L ++ +Q+ + ++A SV + DF+ S
Sbjct: 327 ACRGEKHGELWVRDSPA-SLALISSQSSE------NLEADSVCKIHEEKDFIAFCSSTPH 379
Query: 127 YYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQV 186
S R+ GS +I +L KY E+ V + + P A K Q+
Sbjct: 380 NVSWRDRTRGSIFITELITCFQKYSCCCHLMEIFRKVQKSF--------EVPQA--KAQM 429
Query: 187 PCF-ASMLTKKLHFFP 201
P + LT+ + FP
Sbjct: 430 PTIERATLTRDFYLFP 445
>gi|209870075 caspase 5 isoform d [Homo sapiens]
Length = 216
Score = 54.3 bits (129), Expect = 7e-08
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 19 HADADCFVCVFLSHG--EGNHIYAYDAK----IEIQTLTGLFKGDKCHSLVGKPKIFIIQ 72
H +D V +SHG EG A+ K + T+ +F C SL KPK+ I+Q
Sbjct: 36 HKSSDSTFLVLMSHGILEGICGTAHKKKKPDVLLYDTIFQIFNNRNCLSLKDKPKVIIVQ 95
Query: 73 ACRGNQH------DVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEG 126
ACRG +H D P L ++ +Q+ + ++A SV + DF+ S
Sbjct: 96 ACRGEKHGELWVRDSPA-SLALISSQSSE------NLEADSVCKIHEEKDFIAFCSSTPH 148
Query: 127 YYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQV 186
S R+ GS +I +L KY E+ V + + P A K Q+
Sbjct: 149 NVSWRDRTRGSIFITELITCFQKYSCCCHLMEIFRKVQKSF--------EVPQA--KAQM 198
Query: 187 PCF-ASMLTKKLHFFP 201
P + LT+ + FP
Sbjct: 199 PTIERATLTRDFYLFP 214
>gi|209870073 caspase 5 isoform c [Homo sapiens]
Length = 292
Score = 54.3 bits (129), Expect = 7e-08
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 19 HADADCFVCVFLSHG--EGNHIYAYDAK----IEIQTLTGLFKGDKCHSLVGKPKIFIIQ 72
H +D V +SHG EG A+ K + T+ +F C SL KPK+ I+Q
Sbjct: 112 HKSSDSTFLVLMSHGILEGICGTAHKKKKPDVLLYDTIFQIFNNRNCLSLKDKPKVIIVQ 171
Query: 73 ACRGNQH------DVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEG 126
ACRG +H D P L ++ +Q+ + ++A SV + DF+ S
Sbjct: 172 ACRGEKHGELWVRDSPA-SLALISSQSSE------NLEADSVCKIHEEKDFIAFCSSTPH 224
Query: 127 YYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQV 186
S R+ GS +I +L KY E+ V + + P A K Q+
Sbjct: 225 NVSWRDRTRGSIFITELITCFQKYSCCCHLMEIFRKVQKSF--------EVPQA--KAQM 274
Query: 187 PCF-ASMLTKKLHFFP 201
P + LT+ + FP
Sbjct: 275 PTIERATLTRDFYLFP 290
>gi|209870071 caspase 5 isoform b precursor [Homo sapiens]
Length = 376
Score = 54.3 bits (129), Expect = 7e-08
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 19 HADADCFVCVFLSHG--EGNHIYAYDAK----IEIQTLTGLFKGDKCHSLVGKPKIFIIQ 72
H +D V +SHG EG A+ K + T+ +F C SL KPK+ I+Q
Sbjct: 196 HKSSDSTFLVLMSHGILEGICGTAHKKKKPDVLLYDTIFQIFNNRNCLSLKDKPKVIIVQ 255
Query: 73 ACRGNQH------DVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEG 126
ACRG +H D P L ++ +Q+ + ++A SV + DF+ S
Sbjct: 256 ACRGEKHGELWVRDSPA-SLALISSQSSE------NLEADSVCKIHEEKDFIAFCSSTPH 308
Query: 127 YYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQV 186
S R+ GS +I +L KY E+ V + + P A K Q+
Sbjct: 309 NVSWRDRTRGSIFITELITCFQKYSCCCHLMEIFRKVQKSF--------EVPQA--KAQM 358
Query: 187 PCF-ASMLTKKLHFFP 201
P + LT+ + FP
Sbjct: 359 PTIERATLTRDFYLFP 374
>gi|209870069 caspase 5 isoform a precursor [Homo sapiens]
Length = 434
Score = 54.3 bits (129), Expect = 7e-08
Identities = 54/196 (27%), Positives = 82/196 (41%), Gaps = 30/196 (15%)
Query: 19 HADADCFVCVFLSHG--EGNHIYAYDAK----IEIQTLTGLFKGDKCHSLVGKPKIFIIQ 72
H +D V +SHG EG A+ K + T+ +F C SL KPK+ I+Q
Sbjct: 254 HKSSDSTFLVLMSHGILEGICGTAHKKKKPDVLLYDTIFQIFNNRNCLSLKDKPKVIIVQ 313
Query: 73 ACRGNQH------DVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEG 126
ACRG +H D P L ++ +Q+ + ++A SV + DF+ S
Sbjct: 314 ACRGEKHGELWVRDSPA-SLALISSQSSE------NLEADSVCKIHEEKDFIAFCSSTPH 366
Query: 127 YYSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQV 186
S R+ GS +I +L KY E+ V + + P A K Q+
Sbjct: 367 NVSWRDRTRGSIFITELITCFQKYSCCCHLMEIFRKVQKSF--------EVPQA--KAQM 416
Query: 187 PCF-ASMLTKKLHFFP 201
P + LT+ + FP
Sbjct: 417 PTIERATLTRDFYLFP 432
>gi|15451910 caspase 4 isoform gamma precursor [Homo sapiens]
Length = 321
Score = 51.2 bits (121), Expect = 6e-07
Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 28/195 (14%)
Query: 19 HADADCFVCVFLSHG--EGNHIYAYDAK----IEIQTLTGLFKGDKCHSLVGKPKIFIIQ 72
H +D V +SHG EG +D K + T+ +F C SL KPK+ I+Q
Sbjct: 141 HKSSDSTFLVLMSHGILEGICGTVHDEKKPDVLLYDTIFQIFNNRNCLSLKDKPKVIIVQ 200
Query: 73 ACRG-NQHDVPV----IPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGY 127
ACRG N+ ++ V L+V +Q+ + ++ +VY DF+ S
Sbjct: 201 ACRGANRGELWVRDSPASLEVASSQSSE------NLEEDAVYKTHVEKDFIAFCSSTPHN 254
Query: 128 YSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVP 187
S R++ GS +I L KY E V RKV Q + P A K Q+P
Sbjct: 255 VSWRDSTMGSIFITQLITCFQKYSWCCHLEE----VFRKVQQS----FETPRA--KAQMP 304
Query: 188 CFASM-LTKKLHFFP 201
+ +T+ + FP
Sbjct: 305 TIERLSMTRYFYLFP 319
>gi|4502577 caspase 4 isoform alpha precursor [Homo sapiens]
Length = 377
Score = 51.2 bits (121), Expect = 6e-07
Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 28/195 (14%)
Query: 19 HADADCFVCVFLSHG--EGNHIYAYDAK----IEIQTLTGLFKGDKCHSLVGKPKIFIIQ 72
H +D V +SHG EG +D K + T+ +F C SL KPK+ I+Q
Sbjct: 197 HKSSDSTFLVLMSHGILEGICGTVHDEKKPDVLLYDTIFQIFNNRNCLSLKDKPKVIIVQ 256
Query: 73 ACRG-NQHDVPV----IPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGY 127
ACRG N+ ++ V L+V +Q+ + ++ +VY DF+ S
Sbjct: 257 ACRGANRGELWVRDSPASLEVASSQSSE------NLEEDAVYKTHVEKDFIAFCSSTPHN 310
Query: 128 YSHRETVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVP 187
S R++ GS +I L KY E V RKV Q + P A K Q+P
Sbjct: 311 VSWRDSTMGSIFITQLITCFQKYSWCCHLEE----VFRKVQQS----FETPRA--KAQMP 360
Query: 188 CFASM-LTKKLHFFP 201
+ +T+ + FP
Sbjct: 361 TIERLSMTRYFYLFP 375
>gi|187608577 CASP8 and FADD-like apoptosis regulator isoform 1
[Homo sapiens]
Length = 480
Score = 49.7 bits (117), Expect = 2e-06
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Query: 19 HADADCFVCVFLSHGEGNHIYAYD---AKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACR 75
H D D FVCV +S G +Y D + + + + +F GD C L GKPK+F IQ
Sbjct: 302 HRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPKMFFIQNYV 361
Query: 76 GNQHDVPVIPLDVVDNQTEKLDTNIT-EVDAASVYTLPAGADFLMCYSVAEGYYSHRETV 134
++ + L VD K N+ + + T+ ADF A+ +
Sbjct: 362 VSEGQLEDSSLLEVDGPAMK---NVEFKAQKRGLCTVHREADFFWSLCTADMSLLEQSHS 418
Query: 135 NGSWYIQDLCEML 147
+ S Y+Q L + L
Sbjct: 419 SPSLYLQCLSQKL 431
>gi|187608571 CASP8 and FADD-like apoptosis regulator isoform 1
[Homo sapiens]
Length = 480
Score = 49.7 bits (117), Expect = 2e-06
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Query: 19 HADADCFVCVFLSHGEGNHIYAYD---AKIEIQTLTGLFKGDKCHSLVGKPKIFIIQACR 75
H D D FVCV +S G +Y D + + + + +F GD C L GKPK+F IQ
Sbjct: 302 HRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFMGDSCPYLAGKPKMFFIQNYV 361
Query: 76 GNQHDVPVIPLDVVDNQTEKLDTNIT-EVDAASVYTLPAGADFLMCYSVAEGYYSHRETV 134
++ + L VD K N+ + + T+ ADF A+ +
Sbjct: 362 VSEGQLEDSSLLEVDGPAMK---NVEFKAQKRGLCTVHREADFFWSLCTADMSLLEQSHS 418
Query: 135 NGSWYIQDLCEML 147
+ S Y+Q L + L
Sbjct: 419 SPSLYLQCLSQKL 431
>gi|15431330 caspase 1 isoform gamma precursor [Homo sapiens]
Length = 311
Score = 49.3 bits (116), Expect = 2e-06
Identities = 54/190 (28%), Positives = 79/190 (41%), Gaps = 18/190 (9%)
Query: 19 HADADCFVCVFLSHG--EG----NHIYAYDAKIEIQTLTGLFKGDKCHSLVGKPKIFIIQ 72
H +D VF+SHG EG H +++ + + C SL KPK+ IIQ
Sbjct: 131 HKTSDSTFLVFMSHGIREGICGKKHSEQVPDILQLNAIFNMLNTKNCPSLKDKPKVIIIQ 190
Query: 73 ACRGNQHDVPVIPLDVVDNQTEKLDTNITEVDAASVYTLPAGADFLMCYSVAEGYYSHRE 132
ACRG+ V V + L T E + ++ DF+ S S R
Sbjct: 191 ACRGDSPGVVWFKDSVGVSGNLSLPTT-EEFEDDAIKKAHIEKDFIAFCSSTPDNVSWRH 249
Query: 133 TVNGSWYIQDLCEMLGKYGSSLEFTELLTLVNRKVSQRRVDFCKDPSAIGKKQVPCFASM 192
GS +I L E + +Y S + E+ RKV R F + P G+ Q+P +
Sbjct: 250 PTMGSVFIGRLIEHMQEYACSCDVEEIF----RKV---RFSF-EQPD--GRAQMPTTERV 299
Query: 193 -LTKKLHFFP 201
LT+ + FP
Sbjct: 300 TLTRCFYLFP 309
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,526,116
Number of Sequences: 37866
Number of extensions: 308339
Number of successful extensions: 563
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 487
Number of HSP's gapped (non-prelim): 37
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.