Guide to the Human Genome
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Name: CHRM2 Sequence: fasta or formatted (466aa) NCBI GI: 54792105
Description:

cholinergic receptor, muscarinic 2

Referenced in:

Acetylcholine

Other entries for this name:
alt mRNA [466aa] cholinergic receptor, muscarinic 2
alt mRNA [466aa] cholinergic receptor, muscarinic 2
alt mRNA [466aa] cholinergic receptor, muscarinic 2
alt mRNA [466aa] cholinergic receptor, muscarinic 2
alt mRNA [466aa] cholinergic receptor, muscarinic 2
alt mRNA [466aa] cholinergic receptor, muscarinic 2
alt mRNA [466aa] cholinergic receptor, muscarinic 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         32           3
 C cysteine            2.8         13           1
 D aspartate           3.6         17           2
 E glutamate           3.2         15           2
 F phenylalanine       3.9         18           2
 G glycine             4.3         20           1
 H histidine           1.3          6           1
 I isoleucine          7.9         37           2
 K lysine              6.7         31           3
 L leucine             7.5         35           2
 M methionine          2.8         13           2
 N asparagine          7.5         35           4
 P proline             5.2         24           3
 Q glutamine           2.6         12           1
 R arginine            3.0         14           1
 S serine              8.2         38           2
 T threonine           8.2         38           2
 V valine              9.2         43           2
 W tryptophan          1.9          9           1
 Y tyrosine            3.4         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cholinergic receptor, muscarinic 2 
CHRM2                 1.000   cholinergic receptor, muscarinic 2 
CHRM2                 1.000   cholinergic receptor, muscarinic 2 
CHRM2                 1.000   cholinergic receptor, muscarinic 2 
CHRM2                 1.000   cholinergic receptor, muscarinic 2 
CHRM2                 1.000   cholinergic receptor, muscarinic 2 
CHRM2                 1.000   cholinergic receptor, muscarinic 2 
CHRM2                 1.000   cholinergic receptor, muscarinic 2 
CHRM4                 0.542   cholinergic receptor, muscarinic 4 
CHRM3                 0.417   cholinergic receptor, muscarinic 3 
CHRM1                 0.398   cholinergic receptor, muscarinic 1 
CHRM5                 0.395   cholinergic receptor, muscarinic 5 
HRH1                  0.178   histamine receptor H1 
HRH1                  0.178   histamine receptor H1 
HRH1                  0.178   histamine receptor H1 
HRH1                  0.178   histamine receptor H1 
HRH3                  0.175   histamine receptor H3 
HTR1A                 0.161   5-hydroxytryptamine (serotonin) receptor 1A 
DRD2                  0.136   dopamine receptor D2 isoform short 
DRD2                  0.135   dopamine receptor D2 isoform long 
ADRA2A                0.135   alpha-2A-adrenergic receptor 
ADRA2C                0.122   alpha-2C-adrenergic receptor 
ADRA2B                0.121   alpha-2B-adrenergic receptor 
ADRA1A                0.118   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.118   alpha-1A-adrenergic receptor isoform 1 
ADRA1A                0.118   alpha-1A-adrenergic receptor isoform 2 
ADRA1A                0.118   alpha-1A-adrenergic receptor isoform 3 
HTR1B                 0.115   5-hydroxytryptamine (serotonin) receptor 1B 
DRD4                  0.111   dopamine receptor D4 
HTR1D                 0.109   5-hydroxytryptamine (serotonin) receptor 1D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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