Guide to the Human Genome
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Name: CAMKK1 Sequence: fasta or formatted (520aa) NCBI GI: 148806859
Description:

calcium/calmodulin-dependent protein kinase 1 alpha isoform b

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [505aa] calcium/calmodulin-dependent protein kinase 1 alpha isoform a
alt prot [505aa] calcium/calmodulin-dependent protein kinase 1 alpha isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         43           2
 C cysteine            1.5          8           2
 D aspartate           5.4         28           2
 E glutamate           8.3         43           3
 F phenylalanine       2.5         13           1
 G glycine             6.2         32           2
 H histidine           2.5         13           2
 I isoleucine          4.8         25           1
 K lysine              5.8         30           3
 L leucine            10.2         53           3
 M methionine          1.3          7           1
 N asparagine          3.3         17           1
 P proline             8.3         43           3
 Q glutamine           4.4         23           2
 R arginine            6.0         31           2
 S serine              7.5         39           2
 T threonine           3.1         16           2
 V valine              7.3         38           2
 W tryptophan          1.0          5           1
 Y tyrosine            2.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent protein kinase 1 alpha... 
CAMKK1                0.909   calcium/calmodulin-dependent protein kinase 1 alpha ...
CAMKK1                0.909   calcium/calmodulin-dependent protein kinase 1 alpha ...
CAMKK2                0.530   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.530   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.530   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.530   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.446   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.446   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.446   calcium/calmodulin-dependent protein kinase kinase 2...
BRSK1                 0.105   BR serine/threonine kinase 1 
STK11                 0.103   serine/threonine protein kinase 11 
SIK2                  0.100   SNF1-like kinase 2 
PRKAA1                0.098   protein kinase, AMP-activated, alpha 1 catalytic sub...
PRKACA                0.098   cAMP-dependent protein kinase catalytic subunit alph...
PRKACA                0.098   cAMP-dependent protein kinase catalytic subunit alpha...
CAMK2G                0.098   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2D                0.097   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.097   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.097   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.097   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.097   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.097   calcium/calmodulin-dependent protein kinase II delta...
CAMK2A                0.096   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.096   calcium/calmodulin-dependent protein kinase II alpha...
PRKAA2                0.096   AMP-activated protein kinase alpha 2 catalytic subun...
CAMK2G                0.095   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.095   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.095   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.095   calcium/calmodulin-dependent protein kinase II gamma...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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