Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CAMKK2 Sequence: fasta or formatted (545aa) NCBI GI: 27437025
Description:

calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 3

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [588aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 1
alt prot [541aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 2
alt prot [498aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 4
alt prot [533aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 5
alt prot [490aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 6
alt prot [541aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         31           2
 C cysteine            2.6         14           1
 D aspartate           4.8         26           2
 E glutamate           7.5         41           2
 F phenylalanine       2.8         15           1
 G glycine             8.1         44           4
 H histidine           2.2         12           2
 I isoleucine          4.8         26           2
 K lysine              5.5         30           3
 L leucine             9.4         51           2
 M methionine          2.8         15           1
 N asparagine          2.8         15           1
 P proline             9.0         49           3
 Q glutamine           4.4         24           1
 R arginine            7.0         38           2
 S serine              9.5         52           4
 T threonine           2.9         16           1
 V valine              5.9         32           2
 W tryptophan          0.4          2           1
 Y tyrosine            2.2         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent protein kinase kinase 2... 
CAMKK2                0.981   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.888   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.869   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.865   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.846   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.846   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK1                0.441   calcium/calmodulin-dependent protein kinase 1 alpha ...
CAMKK1                0.441   calcium/calmodulin-dependent protein kinase 1 alpha ...
CAMKK1                0.421   calcium/calmodulin-dependent protein kinase 1 alpha...
SIK2                  0.116   SNF1-like kinase 2 
SIK1                  0.114   SNF1-like kinase 
TSSK1B                0.107   testis-specific serine kinase 1 
STK11                 0.106   serine/threonine protein kinase 11 
CAMK2A                0.106   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.106   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2D                0.106   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.106   calcium/calmodulin-dependent protein kinase II delta...
PNCK                  0.105   pregnancy upregulated non-ubiquitously expressed Ca...
PNCK                  0.105   pregnancy upregulated non-ubiquitously expressed Ca...
BRSK1                 0.105   BR serine/threonine kinase 1 
MARK2                 0.104   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.104   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.104   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.104   MAP/microtubule affinity-regulating kinase 2 isofor...
CAMK2G                0.104   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.104   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.104   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.104   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.104   calcium/calmodulin-dependent protein kinase II gamma...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press