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Name: CAMKK2 Sequence: fasta or formatted (490aa) NCBI GI: 27437023
Description:

calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 6

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [588aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 1
alt prot [541aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 2
alt prot [498aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 4
alt prot [533aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 5
alt prot [545aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 3
alt prot [541aa] calcium/calmodulin-dependent protein kinase kinase 2 beta isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         24           2
 C cysteine            2.4         12           1
 D aspartate           5.3         26           2
 E glutamate           7.1         35           2
 F phenylalanine       3.1         15           1
 G glycine             7.6         37           2
 H histidine           2.0         10           2
 I isoleucine          5.3         26           2
 K lysine              6.1         30           3
 L leucine            10.0         49           2
 M methionine          2.7         13           1
 N asparagine          3.1         15           1
 P proline             7.8         38           3
 Q glutamine           4.5         22           1
 R arginine            6.1         30           2
 S serine              9.8         48           4
 T threonine           3.5         17           1
 V valine              6.1         30           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.4         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent protein kinase kinase 2... 
CAMKK2                0.998   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.979   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.977   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.972   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.951   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK2                0.951   calcium/calmodulin-dependent protein kinase kinase 2...
CAMKK1                0.495   calcium/calmodulin-dependent protein kinase 1 alpha ...
CAMKK1                0.495   calcium/calmodulin-dependent protein kinase 1 alpha ...
CAMKK1                0.473   calcium/calmodulin-dependent protein kinase 1 alpha...
SIK2                  0.130   SNF1-like kinase 2 
SIK1                  0.128   SNF1-like kinase 
STK11                 0.120   serine/threonine protein kinase 11 
CAMK2A                0.120   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.120   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2D                0.119   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.119   calcium/calmodulin-dependent protein kinase II delta...
TSSK1B                0.118   testis-specific serine kinase 1 
PNCK                  0.118   pregnancy upregulated non-ubiquitously expressed Ca...
PNCK                  0.118   pregnancy upregulated non-ubiquitously expressed Ca...
BRSK1                 0.118   BR serine/threonine kinase 1 
MARK2                 0.117   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.117   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.117   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.117   MAP/microtubule affinity-regulating kinase 2 isofor...
CAMK2G                0.117   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.117   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.117   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.117   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.117   calcium/calmodulin-dependent protein kinase II gamma...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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