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Search of human proteins with 148528975
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148528975 LON peptidase N-terminal domain and ring finger 2
[Homo sapiens]
(754 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148528975 LON peptidase N-terminal domain and ring finger 2 [... 1522 0.0
gi|73747840 LON peptidase N-terminal domain and ring finger 3 is... 563 e-160
gi|87080813 LON peptidase N-terminal domain and ring finger 1 [H... 498 e-141
gi|37622896 LON peptidase N-terminal domain and ring finger 3 is... 457 e-128
gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo ... 218 1e-56
gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo ... 218 1e-56
gi|24025688 ligand of numb-protein X 2 [Homo sapiens] 56 1e-07
gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens] 54 5e-07
gi|237681119 breast cancer 1, early onset isoform 2 [Homo sapiens] 52 2e-06
gi|237681125 breast cancer 1, early onset isoform 5 [Homo sapiens] 52 2e-06
gi|237681123 breast cancer 1, early onset isoform 4 [Homo sapiens] 52 2e-06
gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens] 52 2e-06
gi|31377566 ring finger protein 168 [Homo sapiens] 52 2e-06
gi|37595555 ring finger protein 125 [Homo sapiens] 52 2e-06
gi|54792146 tripartite motif-containing 47 [Homo sapiens] 52 3e-06
gi|210147600 tripartite motif-containing 64 [Homo sapiens] 50 8e-06
gi|7706091 bifunctional apoptosis regulator [Homo sapiens] 50 8e-06
gi|239755486 PREDICTED: tripartite motif-containing protein 64C-... 50 1e-05
gi|239755484 PREDICTED: tripartite motif-containing protein 64C-... 50 1e-05
gi|239750044 PREDICTED: tripartite motif-containing protein 64C-... 50 1e-05
gi|239750042 PREDICTED: tripartite motif-containing protein 64C-... 50 1e-05
gi|239744355 PREDICTED: tripartite motif-containing protein 64C-... 50 1e-05
gi|239744353 PREDICTED: tripartite motif-containing protein 64C-... 50 1e-05
gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens] 50 1e-05
gi|157426898 tripartite motif-containing 10 isoform 1 [Homo sapi... 50 1e-05
gi|157426896 tripartite motif-containing 10 isoform 2 [Homo sapi... 50 1e-05
gi|109240538 polycomb group ring finger 1 [Homo sapiens] 49 1e-05
gi|8923898 zinc finger protein 313 [Homo sapiens] 49 2e-05
gi|22749269 ring finger protein 129 [Homo sapiens] 49 2e-05
gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo s... 49 2e-05
>gi|148528975 LON peptidase N-terminal domain and ring finger 2
[Homo sapiens]
Length = 754
Score = 1522 bits (3941), Expect = 0.0
Identities = 754/754 (100%), Positives = 754/754 (100%)
Query: 1 MSPEPVPPPPPPQCPGCDRAEPIAQRLEEGDEAFRAGDYEMAAELFRSMLAGLAQPDRGL 60
MSPEPVPPPPPPQCPGCDRAEPIAQRLEEGDEAFRAGDYEMAAELFRSMLAGLAQPDRGL
Sbjct: 1 MSPEPVPPPPPPQCPGCDRAEPIAQRLEEGDEAFRAGDYEMAAELFRSMLAGLAQPDRGL 60
Query: 61 CLRLGDALARAGRLPEALGAFRGAARLGALRPEELEELAGGLVRAVGLRDRPLSAENPGG 120
CLRLGDALARAGRLPEALGAFRGAARLGALRPEELEELAGGLVRAVGLRDRPLSAENPGG
Sbjct: 61 CLRLGDALARAGRLPEALGAFRGAARLGALRPEELEELAGGLVRAVGLRDRPLSAENPGG 120
Query: 121 EPEAPGEGGPAPEPRAPRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVRRVN 180
EPEAPGEGGPAPEPRAPRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVRRVN
Sbjct: 121 EPEAPGEGGPAPEPRAPRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVRRVN 180
Query: 181 VVLSGLLEKCFPAECRLRRLAGQARSLQRQQQPEAALLRCDQALELAPDDNSLLLLRAEL 240
VVLSGLLEKCFPAECRLRRLAGQARSLQRQQQPEAALLRCDQALELAPDDNSLLLLRAEL
Sbjct: 181 VVLSGLLEKCFPAECRLRRLAGQARSLQRQQQPEAALLRCDQALELAPDDNSLLLLRAEL 240
Query: 241 YLTMKNYEQALQDASAACQNEPLLIKGHQVKAQALSGLGRSKEVLKEFLYCLALNPECNS 300
YLTMKNYEQALQDASAACQNEPLLIKGHQVKAQALSGLGRSKEVLKEFLYCLALNPECNS
Sbjct: 241 YLTMKNYEQALQDASAACQNEPLLIKGHQVKAQALSGLGRSKEVLKEFLYCLALNPECNS 300
Query: 301 VKKEAQKVMCEVLFSATANVHENLTSSIQSRLKAQGHSHMNAQALLEEGDAGSSENSSEK 360
VKKEAQKVMCEVLFSATANVHENLTSSIQSRLKAQGHSHMNAQALLEEGDAGSSENSSEK
Sbjct: 301 VKKEAQKVMCEVLFSATANVHENLTSSIQSRLKAQGHSHMNAQALLEEGDAGSSENSSEK 360
Query: 361 SDMLGNTNSSVLYFILGLHFEEDKKALESILPTAPSAGLKRQFPDDVEDAPDLNAPGKIP 420
SDMLGNTNSSVLYFILGLHFEEDKKALESILPTAPSAGLKRQFPDDVEDAPDLNAPGKIP
Sbjct: 361 SDMLGNTNSSVLYFILGLHFEEDKKALESILPTAPSAGLKRQFPDDVEDAPDLNAPGKIP 420
Query: 421 KKDLSLQRSPNSETEESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHA 480
KKDLSLQRSPNSETEESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHA
Sbjct: 421 KKDLSLQRSPNSETEESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHA 480
Query: 481 PHCPLCKDKLSELLASRNFNITVLAEELIFRYLPDELSDRKRIYDEEMSELSNLTRDVPI 540
PHCPLCKDKLSELLASRNFNITVLAEELIFRYLPDELSDRKRIYDEEMSELSNLTRDVPI
Sbjct: 481 PHCPLCKDKLSELLASRNFNITVLAEELIFRYLPDELSDRKRIYDEEMSELSNLTRDVPI 540
Query: 541 FVCAMAFPTVPCPLHVFEPRYRLMIRRCMETGTKRFGMCLSAEHAGLSEYGCMLEIKDVR 600
FVCAMAFPTVPCPLHVFEPRYRLMIRRCMETGTKRFGMCLSAEHAGLSEYGCMLEIKDVR
Sbjct: 541 FVCAMAFPTVPCPLHVFEPRYRLMIRRCMETGTKRFGMCLSAEHAGLSEYGCMLEIKDVR 600
Query: 601 TFPDGSSVVDAIGISRFRVLSHRHRDGYNTADIEYLEDEKVEGPEYEELAALHDSVHQQS 660
TFPDGSSVVDAIGISRFRVLSHRHRDGYNTADIEYLEDEKVEGPEYEELAALHDSVHQQS
Sbjct: 601 TFPDGSSVVDAIGISRFRVLSHRHRDGYNTADIEYLEDEKVEGPEYEELAALHDSVHQQS 660
Query: 661 VSWFASLQDRMKEQILSHFGVMPDREPEPQSNPSGPAWSWWILAVLPLERKAQLAILGMT 720
VSWFASLQDRMKEQILSHFGVMPDREPEPQSNPSGPAWSWWILAVLPLERKAQLAILGMT
Sbjct: 661 VSWFASLQDRMKEQILSHFGVMPDREPEPQSNPSGPAWSWWILAVLPLERKAQLAILGMT 720
Query: 721 SLKERLLAIRRILVIITRKMNSRQELANARERNN 754
SLKERLLAIRRILVIITRKMNSRQELANARERNN
Sbjct: 721 SLKERLLAIRRILVIITRKMNSRQELANARERNN 754
>gi|73747840 LON peptidase N-terminal domain and ring finger 3
isoform 1 [Homo sapiens]
Length = 759
Score = 563 bits (1452), Expect = e-160
Identities = 318/730 (43%), Positives = 428/730 (58%), Gaps = 71/730 (9%)
Query: 52 GLAQPDRGLCLRLGDALARAGRLPEALGAFRGAARLGALRPEELEELAGGLVRAV----G 107
G + P+ + L DALA GR+ EAL +R + L E+LE+L L V
Sbjct: 61 GTSTPESKVLLTQADALASRGRIREALEVYRQLSERQQLVAEQLEQLVRCLAEKVPQGEA 120
Query: 108 LRDRPLSAENPGGEPEAPGEGGPAPEPRAPR--DLLGCPRCRRLLHKPVTLPCGLTVCKR 165
L P + A E G A A D C +C L PV+L CG T CK
Sbjct: 121 LAPAPPDEGSTASGTVAAEETGAAAAAAATEVWDGFKCRKCHGFLSDPVSLSCGHTFCKL 180
Query: 166 CVEPGPAR-------------------------------PQVRRVNVVLSGLLEKCFPAE 194
C+E G A P RVNVVLSGLL K FP
Sbjct: 181 CLERGRAADRRCALCGVKLSALMVATGRARGARRAGQQPPPPLRVNVVLSGLLGKLFPGP 240
Query: 195 CRLRRLAGQARSLQRQQQPEAALLRCDQALELAPDDNSLLLLRAELYLTMKNYEQALQDA 254
R +L + L R++Q EAALL+ ++A++LAP+D+ L R+++Y T++++E AL DA
Sbjct: 241 ARASQLRHEGNRLYRERQVEAALLKYNEAVKLAPNDHLLYSNRSQIYFTLESHENALHDA 300
Query: 255 SAACQNEPLLIKGHQVKAQALSGLGRSKEVLKEFLYCLALNPECNSVKKEAQKVMCEVLF 314
AC+ P+ K H KAQAL+ LG+ +E L+EFLYC++L+ + + EAQ+ E+
Sbjct: 301 EIACKLRPMGFKAHFRKAQALATLGKVEEALREFLYCVSLDGKNKRARCEAQRDNLEL-- 358
Query: 315 SATANVHENLTSSIQSRLKAQGHSHMNAQALLEEGDAGSSENSSEKSDMLGNTNSSVLYF 374
+ +S ++ + G S M+ + +G ++ E+ + T+
Sbjct: 359 -------PHCSSQEEAAARGDGSSLMDPAKVKGDGQQHHMKDQEEEEEKWDATSPKAASS 411
Query: 375 ILGLHFEEDKK--ALESILPTA-PSAGLKRQFPDDVEDAPDLNAPGKIPKKDLSLQRSPN 431
G E+ +K +ES T P+ K+ P D D P L+ P
Sbjct: 412 KTGKCQEKKRKHCQIESQEETGMPNKASKQDPPTDQGDKPALSLPLA------------- 458
Query: 432 SETEESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLS 491
S D +D ECALCMRL +EPVTTPCGHTFCLKCLERCLDH CPLCKD LS
Sbjct: 459 ---------SFDASDLECALCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLS 509
Query: 492 ELLASRNFNITVLAEELIFRYLPDELSDRKRIYDEEMSELSNLTRDVPIFVCAMAFPTVP 551
+ LASR ++ V+ EELI ++LP+EL +R+++Y+EEM ELSNL ++VPIFVC MA+PTVP
Sbjct: 510 QCLASRKYSKNVIMEELIAKFLPEELKERRKLYEEEMEELSNLNKNVPIFVCTMAYPTVP 569
Query: 552 CPLHVFEPRYRLMIRRCMETGTKRFGMCLSAEHAGLSEYGCMLEIKDVRTFPDGSSVVDA 611
CPLH+FEP YRLMIRRC+ETGT++FGMCL G +EYGC+LEI++V+ F DG SVVD+
Sbjct: 570 CPLHIFEPCYRLMIRRCIETGTRQFGMCLGDPVKGFAEYGCILEIRNVQFFADGRSVVDS 629
Query: 612 IGISRFRVLSHRHRDGYNTADIEYLEDEKVEGPEYEELAALHDSVHQQSVSWFASLQDRM 671
IG RFRVL RDGYNTADIEY+ED+KV+G + EL LH+ V+QQ+ WF SL+ +
Sbjct: 630 IGKRRFRVLHQSQRDGYNTADIEYIEDQKVQGEDCAELMGLHNCVYQQASLWFHSLKLSL 689
Query: 672 KEQILSHFGVMPDREPEPQSNPSGPAWSWWILAVLPLERKAQLAILGMTSLKERLLAIRR 731
K +IL+HFG MP+++ +PQ NP+GPAW WW+LAVLPLE +AQL L M SLK+RL IRR
Sbjct: 690 KNRILNHFGPMPEKDADPQMNPNGPAWCWWMLAVLPLESRAQLPFLAMRSLKDRLNGIRR 749
Query: 732 ILVIITRKMN 741
+L I+R N
Sbjct: 750 VLAFISRNQN 759
>gi|87080813 LON peptidase N-terminal domain and ring finger 1 [Homo
sapiens]
Length = 773
Score = 498 bits (1283), Expect = e-141
Identities = 305/739 (41%), Positives = 409/739 (55%), Gaps = 79/739 (10%)
Query: 60 LCLRLGDALARAGRLPEALGAFRGAARLGA-LRPEELEELAGGLVRAVGLRDRPLSAENP 118
L LR G+ LA G L AL AF A R GA RPE L G LV + R
Sbjct: 50 LLLRRGELLALGGHLKGALEAFAAALRRGAPARPECL----GALVDCLVFNYRLRHGLGW 105
Query: 119 GGEPEAPGEGGPAPEPRAPRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVE---------- 168
P A +GG LL C CR L +PVT+PCG + C+RC+
Sbjct: 106 SAAPVAGADGGAG-------GLLRCLGCRGFLSEPVTVPCGHSYCRRCLRRELRARCRLC 158
Query: 169 --------------------PGPARPQVR----RVNVVLSGLLEKCFPAECRLRRLAGQA 204
P P + R +VVL+ L EK FP + R AG+
Sbjct: 159 RDRLPPATASATDAEGTAPRPPPLAAAIAASDFRTSVVLNHLAEKWFPGQRERARAAGRL 218
Query: 205 RSLQRQQQPEAALLRCDQALELAPDDNSLLLLRAELYLTMKNYEQALQDASAACQNEPLL 264
L Q + AL +AL P D + + RAE Y ++ ++ A++D +A P
Sbjct: 219 GELLHQGRYREALAAACEALRAEPSDLIVKIYRAESYAGLQEFKAAIEDLNAVLFQLPDW 278
Query: 265 IKGHQVKAQALSGLGRSKEVLKEFLYCLALNPECNSVKKEAQKVMCEVLFSATANVHENL 324
+ + K + L G + L+ FL CLAL+ + K + QK++C++L N+ E L
Sbjct: 279 PEVYFRKGKVLCDAGFLGDALQLFLQCLALDEDFAPAKLQVQKILCDLLLPE--NLKEGL 336
Query: 325 TSSIQSRLKAQGHSHMNAQALLEEGDAGSSENSSEKSDMLGNTNSSVLYFILGLHFEEDK 384
S S L + + +++EE + +E S ++S+ + S + L+ +
Sbjct: 337 KESSWSSLPCTKNRPFDFHSVMEESQS-LNEPSPKQSEEIPEVTSEPVKG--SLNRAQSA 393
Query: 385 KALESILPTAPSAGLKRQFPDDVEDAPDLNAPGKIPKKDLSLQRSPNSETEES------Q 438
+++ S A LKR + V + G + K+ LSL E+ Q
Sbjct: 394 QSINSTEMPAREDCLKRVSSEPVLSVQE---KGVLLKRKLSLLEQDVIVNEDGRNKLKKQ 450
Query: 439 GLS------------------LDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHA 480
G + +DV+DFEC+LCMRL FEPVTTPCGH+FC CLERCLDHA
Sbjct: 451 GETPNEVCMFSLAYGDIPEELIDVSDFECSLCMRLFFEPVTTPCGHSFCKNCLERCLDHA 510
Query: 481 PHCPLCKDKLSELLASRNFNITVLAEELIFRYLPDELSDRKRIYDEEMSELSNLTRDVPI 540
P+CPLCK+ L E LA R + +T L EELI +YLPDELS+RK+IYDEE +ELS+LT++VPI
Sbjct: 511 PYCPLCKESLKEYLADRRYCVTQLLEELIVKYLPDELSERKKIYDEETAELSHLTKNVPI 570
Query: 541 FVCAMAFPTVPCPLHVFEPRYRLMIRRCMETGTKRFGMCLSAEHAGLSEYGCMLEIKDVR 600
FVC MA+PTVPCPLHVFEPRYRLMIRR ++TGTK+FGMC+S ++YGCML+I++V
Sbjct: 571 FVCTMAYPTVPCPLHVFEPRYRLMIRRSIQTGTKQFGMCVSDTQNSFADYGCMLQIRNVH 630
Query: 601 TFPDGSSVVDAIGISRFRVLSHRHRDGYNTADIEYLEDEKVEG-PEYEELAALHDSVHQQ 659
PDG SVVD +G RFRVL +DGY TADIEYLED KVE E + L LHD V+ Q
Sbjct: 631 FLPDGRSVVDTVGGKRFRVLKRGMKDGYCTADIEYLEDVKVENEDEIKNLRELHDLVYSQ 690
Query: 660 SVSWFASLQDRMKEQILSHFGVMPDREPEPQSNPSGPAWSWWILAVLPLERKAQLAILGM 719
+ SWF +L+DR + QIL HFG MP+RE Q+ P+GPAW WW+LAVLP++ + QL++L M
Sbjct: 691 ACSWFQNLRDRFRSQILQHFGSMPEREENLQAAPNGPAWCWWLLAVLPVDPRYQLSVLSM 750
Query: 720 TSLKERLLAIRRILVIITR 738
SLKERL I+ IL +R
Sbjct: 751 KSLKERLTKIQHILTYFSR 769
>gi|37622896 LON peptidase N-terminal domain and ring finger 3
isoform 2 [Homo sapiens]
Length = 718
Score = 457 bits (1177), Expect = e-128
Identities = 289/711 (40%), Positives = 381/711 (53%), Gaps = 74/711 (10%)
Query: 52 GLAQPDRGLCLRLGDALARAGRLPEALGAFRGAARLGALRPEELEELAGGLVRAV----G 107
G + P+ + L DALA GR+ EAL +R + L E+LE+L L V
Sbjct: 61 GTSTPESKVLLTQADALASRGRIREALEVYRQLSERQQLVAEQLEQLVRCLAEKVPQGEA 120
Query: 108 LRDRPLSAENPGGEPEAPGEGGPAPEPRAPR--DLLGCPRCRRLLHKPVTLPCGLTVCKR 165
L P + A E G A A D C +C L PV+L CG T CK
Sbjct: 121 LAPAPPDEGSTASGTVAAEETGAAAAAAATEVWDGFKCRKCHGFLSDPVSLSCGHTFCKL 180
Query: 166 CVEPGPARPQ-VRRVNVVLSGLLEKCFPAECRLRRLAGQARSLQRQQQPEAALLRCDQAL 224
C+E G A + V LS L+ G+AR +R Q LR + L
Sbjct: 181 CLERGRAADRRCALCGVKLSALMVA-----------TGRARGARRAGQQPPPPLRVNVVL 229
Query: 225 -----ELAPDDNSLLLLRAE---LYLTMKNYEQAL---QDASAACQNEPLLIKGHQVKAQ 273
+L P LR E LY + E AL +A N+ LL ++Q
Sbjct: 230 SGLLGKLFPGPARASQLRHEGNRLYRE-RQVEAALLKYNEAVKLAPNDHLLYSN---RSQ 285
Query: 274 ALSGLGRSKEVLKEFLYCLALNPECNSVKKEAQKVMCEVLFSATANVHENLTSSIQSRLK 333
L + L + L P K + C +S ++ +
Sbjct: 286 IYFTLESHENALHDAEIACKLRPM--GFKDNLELPHC--------------SSQEEAAAR 329
Query: 334 AQGHSHMNAQALLEEGDAGSSENSSEKSDMLGNTNSSVLYFILGLHFEEDKK--ALESIL 391
G S M+ + +G ++ E+ + T+ G E+ +K +ES
Sbjct: 330 GDGSSLMDPAKVKGDGQQHHMKDQEEEEEKWDATSPKAASSKTGKCQEKKRKHCQIESQE 389
Query: 392 PTA-PSAGLKRQFPDDVEDAPDLNAPGKIPKKDLSLQRSPNSETEESQGLSLDVTDFECA 450
T P+ K+ P D D P L+ P S D +D ECA
Sbjct: 390 ETGMPNKASKQDPPTDQGDKPALSLPLA----------------------SFDASDLECA 427
Query: 451 LCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVLAEELIF 510
LCMRL +EPVTTPCGHTFCLKCLERCLDH CPLCKD LS+ LASR ++ V+ EELI
Sbjct: 428 LCMRLFYEPVTTPCGHTFCLKCLERCLDHNAKCPLCKDGLSQCLASRKYSKNVIMEELIA 487
Query: 511 RYLPDELSDRKRIYDEEMSELSNLTRDVPIFVCAMAFPTVPCPLHVFEPRYRLMIRRCME 570
++LP+EL +R+++Y+EEM ELSNL ++VPIFVC MA+PTVPCPLH+FEP YRLMIRRC+E
Sbjct: 488 KFLPEELKERRKLYEEEMEELSNLNKNVPIFVCTMAYPTVPCPLHIFEPCYRLMIRRCIE 547
Query: 571 TGTKRFGMCLSAEHAGLSEYGCMLEIKDVRTFPDGSSVVDAIGISRFRVLSHRHRDGYNT 630
TGT++FGMCL G +EYGC+LEI++V+ F DG SVVD+IG RFRVL RDGYNT
Sbjct: 548 TGTRQFGMCLGDPVKGFAEYGCILEIRNVQFFADGRSVVDSIGKRRFRVLHQSQRDGYNT 607
Query: 631 ADIEYLEDEKVEGPEYEELAALHDSVHQQSVSWFASLQDRMKEQILSHFGVMPDREPEPQ 690
ADIEY+ED+KV+G + EL LH+ V+QQ+ WF SL+ +K +IL+HFG MP+++ +PQ
Sbjct: 608 ADIEYIEDQKVQGEDCAELMGLHNCVYQQASLWFHSLKLSLKNRILNHFGPMPEKDADPQ 667
Query: 691 SNPSGPAWSWWILAVLPLERKAQLAILGMTSLKERLLAIRRILVIITRKMN 741
NP+GPAW WW+LAVLPLE +AQL L M SLK+RL IRR+L I+R N
Sbjct: 668 MNPNGPAWCWWMLAVLPLESRAQLPFLAMRSLKDRLNGIRRVLAFISRNQN 718
>gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo
sapiens]
Length = 598
Score = 218 bits (556), Expect = 1e-56
Identities = 133/222 (59%), Positives = 140/222 (63%), Gaps = 45/222 (20%)
Query: 1 MSPEPVPPPPPPQCPGCDRAEPIAQRLEEGDEAFRAGDYEMAAELFRSMLAGLAQPDRGL 60
+S EPVPPPP QCPGCD EPIAQRLEEGDEAFR +Y+ AA LFRS LA LAQPDRG
Sbjct: 49 ISTEPVPPPP--QCPGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQ 106
Query: 61 CLRLGDALARAGRLPEALGAFRGAARLGALRPE---ELEELAGGLVRAVGLRDRPLSAEN 117
CLRLG+ALARA RLP ALGAF A RL ALRPE EL ELAGGLV GLR+RPL
Sbjct: 107 CLRLGNALARADRLPVALGAFCVALRLEALRPEELGELAELAGGLV-CPGLRERPLFTGK 165
Query: 118 PGGEPEAPGEGGPAPEPRAPRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVR 177
PGGE EAP G G RPQ
Sbjct: 166 PGGELEAPALRG---------------------------------------AGAERPQAL 186
Query: 178 RVNVVLSGLLEKCFPAECRLRRLAGQARSLQRQQQPEAALLR 219
RVNVVLS LE+CFPA+C L RL GQARSLQRQQQPEAALLR
Sbjct: 187 RVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLR 228
>gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo
sapiens]
Length = 616
Score = 218 bits (556), Expect = 1e-56
Identities = 133/222 (59%), Positives = 140/222 (63%), Gaps = 45/222 (20%)
Query: 1 MSPEPVPPPPPPQCPGCDRAEPIAQRLEEGDEAFRAGDYEMAAELFRSMLAGLAQPDRGL 60
+S EPVPPPP QCPGCD EPIAQRLEEGDEAFR +Y+ AA LFRS LA LAQPDRG
Sbjct: 67 ISTEPVPPPP--QCPGCDCGEPIAQRLEEGDEAFRQSEYQKAAGLFRSTLARLAQPDRGQ 124
Query: 61 CLRLGDALARAGRLPEALGAFRGAARLGALRPE---ELEELAGGLVRAVGLRDRPLSAEN 117
CLRLG+ALARA RLP ALGAF A RL ALRPE EL ELAGGLV GLR+RPL
Sbjct: 125 CLRLGNALARADRLPVALGAFCVALRLEALRPEELGELAELAGGLV-CPGLRERPLFTGK 183
Query: 118 PGGEPEAPGEGGPAPEPRAPRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVR 177
PGGE EAP G G RPQ
Sbjct: 184 PGGELEAPALRG---------------------------------------AGAERPQAL 204
Query: 178 RVNVVLSGLLEKCFPAECRLRRLAGQARSLQRQQQPEAALLR 219
RVNVVLS LE+CFPA+C L RL GQARSLQRQQQPEAALLR
Sbjct: 205 RVNVVLSRKLERCFPAKCPLLRLEGQARSLQRQQQPEAALLR 246
>gi|24025688 ligand of numb-protein X 2 [Homo sapiens]
Length = 690
Score = 56.2 bits (134), Expect = 1e-07
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 446 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVLA 505
D C +C++ L +P+ TPCGHTFC KCL L CPL + +L L ++ ++L
Sbjct: 47 DLVCHICLQPLLQPLDTPCGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKS---SILV 103
Query: 506 EELIFRYL 513
+L+ + L
Sbjct: 104 HKLLDKLL 111
>gi|94536782 tripartite motif-containing 35 isoform 2 [Homo sapiens]
Length = 493
Score = 53.9 bits (128), Expect = 5e-07
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 426 LQRSPNSETEESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERC--LDHAPHC 483
++RSP+ S+ ++ CA+C + VT CGH FC C+ RC + +P C
Sbjct: 1 MERSPDVSPGPSRSFKEELL---CAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTC 57
Query: 484 PLCKDKLSELLASRNFNITVLAEELI 509
P+CKD+ S N + L E+L+
Sbjct: 58 PVCKDRASPADLRTNHTLNNLVEKLL 83
Score = 31.6 bits (70), Expect = 2.8
Identities = 53/198 (26%), Positives = 74/198 (37%), Gaps = 46/198 (23%)
Query: 130 PAPEPRAPRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVE--------------PGPARPQ 175
P P +LL C C VTL CG C+ CV A P
Sbjct: 9 PGPSRSFKEELL-CAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCPVCKDRASPA 67
Query: 176 VRRVNVVLSGLLEKC--------------FPAECRLRRLAGQARSLQRQQQPEAALLRCD 221
R N L+ L+EK F CRL R GQ SL + E C
Sbjct: 68 DLRTNHTLNNLVEKLLREEAEGARWTSYRFSRVCRLHR--GQL-SLFCLEDKELLCCSCQ 124
Query: 222 -----QALELAPDDNSLLLLRAELYLTMKNYEQALQDASAAC----QNEPLLIKGHQVKA 272
Q + P ++ RA+ +N E AL++ + A ++ + K +QV+A
Sbjct: 125 ADPRHQGHRVQPVKDTAHDFRAK----CRNMEHALREKAKAFWAMRRSYEAIAKHNQVEA 180
Query: 273 QALSGLGRSK-EVLKEFL 289
L G R + + L+EFL
Sbjct: 181 AWLEGRIRQEFDKLREFL 198
>gi|237681119 breast cancer 1, early onset isoform 2 [Homo sapiens]
Length = 1884
Score = 52.4 bits (124), Expect = 2e-06
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 448 ECALCMRLLFEPVTTPCGHTFCLKCLERCLDH---APHCPLCKDKLSELLASRNFNITVL 504
EC +C+ L+ EPV+T C H FC C+ + L+ CPLCK+ +++ + + L
Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQL 82
Query: 505 AEELI 509
EEL+
Sbjct: 83 VEELL 87
Score = 31.2 bits (69), Expect = 3.7
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 15/73 (20%)
Query: 136 APRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVRRVNVVLSGLLEKCFPAEC 195
A + +L CP C L+ +PV+ C CK C +L L +K P++C
Sbjct: 17 AMQKILECPICLELIKEPVSTKCDHIFCKFC---------------MLKLLNQKKGPSQC 61
Query: 196 RLRRLAGQARSLQ 208
L + RSLQ
Sbjct: 62 PLCKNDITKRSLQ 74
>gi|237681125 breast cancer 1, early onset isoform 5 [Homo sapiens]
Length = 699
Score = 52.4 bits (124), Expect = 2e-06
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 448 ECALCMRLLFEPVTTPCGHTFCLKCLERCLDH---APHCPLCKDKLSELLASRNFNITVL 504
EC +C+ L+ EPV+T C H FC C+ + L+ CPLCK+ +++ + + L
Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQL 82
Query: 505 AEELI 509
EEL+
Sbjct: 83 VEELL 87
Score = 32.0 bits (71), Expect = 2.2
Identities = 83/376 (22%), Positives = 138/376 (36%), Gaps = 89/376 (23%)
Query: 136 APRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVRRVNVVLSGLLEKCFPAEC 195
A + +L CP C L+ +PV+ C CK C +L L +K P++C
Sbjct: 17 AMQKILECPICLELIKEPVSTKCDHIFCKFC---------------MLKLLNQKKGPSQC 61
Query: 196 RLRRLAGQARSLQ---RQQQPEAALLR------CDQALELA----------------PDD 230
L + RSLQ R Q LL+ D LE A D+
Sbjct: 62 PLCKNDITKRSLQESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDE 121
Query: 231 NSLLLL-----RAELYLTMKNYEQALQDASAACQNEPL-----LIKGHQVKAQALS---- 276
S++ RA+ L + +LQ+ S + Q L L +++ Q S
Sbjct: 122 VSIIQSMGYRNRAKRLLQSEPENPSLQETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIE 181
Query: 277 -GLGRSKEVLKEFLYCLALNPECNSVKKE----------AQKVMCEVLFSATANV--HEN 323
G S++ + + YC + E + + A+K CE + N H+
Sbjct: 182 LGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDVTNTEHHQP 241
Query: 324 LTSSIQSRLKAQGHSHMNAQALLEEGDAGS---SENS--------SEKSDMLGNTNSSVL 372
+ + + K H +G+A S SE S S +SD+L +
Sbjct: 242 SNNDLNTTEKRAAERHPEKY----QGEAASGCESETSVSEDCSGLSSQSDILTTQQRDTM 297
Query: 373 YFILGLHFEEDKKALESILPTAPSAGLKRQFPDDVEDAPDL----NAPGKIPKKDLSLQR 428
L + +++ LE++L S +P + D+ L N +K L+ Q+
Sbjct: 298 QHNL-IKLQQEMAELEAVLEQHGSQP-SNSYPSIISDSSALEDLRNPEQSTSEKVLTSQK 355
Query: 429 SPNSE-TEESQGLSLD 443
S ++ +GLS D
Sbjct: 356 SSEYPISQNPEGLSAD 371
>gi|237681123 breast cancer 1, early onset isoform 4 [Homo sapiens]
Length = 759
Score = 52.4 bits (124), Expect = 2e-06
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 448 ECALCMRLLFEPVTTPCGHTFCLKCLERCLDH---APHCPLCKDKLSELLASRNFNITVL 504
EC +C+ L+ EPV+T C H FC C+ + L+ CPLCK+ +++ + + L
Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQL 82
Query: 505 AEELI 509
EEL+
Sbjct: 83 VEELL 87
Score = 32.0 bits (71), Expect = 2.2
Identities = 83/376 (22%), Positives = 138/376 (36%), Gaps = 89/376 (23%)
Query: 136 APRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVRRVNVVLSGLLEKCFPAEC 195
A + +L CP C L+ +PV+ C CK C +L L +K P++C
Sbjct: 17 AMQKILECPICLELIKEPVSTKCDHIFCKFC---------------MLKLLNQKKGPSQC 61
Query: 196 RLRRLAGQARSLQ---RQQQPEAALLR------CDQALELA----------------PDD 230
L + RSLQ R Q LL+ D LE A D+
Sbjct: 62 PLCKNDITKRSLQESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKDE 121
Query: 231 NSLLLL-----RAELYLTMKNYEQALQDASAACQNEPL-----LIKGHQVKAQALS---- 276
S++ RA+ L + +LQ+ S + Q L L +++ Q S
Sbjct: 122 VSIIQSMGYRNRAKRLLQSEPENPSLQETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIE 181
Query: 277 -GLGRSKEVLKEFLYCLALNPECNSVKKE----------AQKVMCEVLFSATANV--HEN 323
G S++ + + YC + E + + A+K CE + N H+
Sbjct: 182 LGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDVTNTEHHQP 241
Query: 324 LTSSIQSRLKAQGHSHMNAQALLEEGDAGS---SENS--------SEKSDMLGNTNSSVL 372
+ + + K H +G+A S SE S S +SD+L +
Sbjct: 242 SNNDLNTTEKRAAERHPEKY----QGEAASGCESETSVSEDCSGLSSQSDILTTQQRDTM 297
Query: 373 YFILGLHFEEDKKALESILPTAPSAGLKRQFPDDVEDAPDL----NAPGKIPKKDLSLQR 428
L + +++ LE++L S +P + D+ L N +K L+ Q+
Sbjct: 298 QHNL-IKLQQEMAELEAVLEQHGSQP-SNSYPSIISDSSALEDLRNPEQSTSEKVLTSQK 355
Query: 429 SPNSE-TEESQGLSLD 443
S ++ +GLS D
Sbjct: 356 SSEYPISQNPEGLSAD 371
>gi|6552299 breast cancer 1, early onset isoform 1 [Homo sapiens]
Length = 1863
Score = 52.4 bits (124), Expect = 2e-06
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 448 ECALCMRLLFEPVTTPCGHTFCLKCLERCLDH---APHCPLCKDKLSELLASRNFNITVL 504
EC +C+ L+ EPV+T C H FC C+ + L+ CPLCK+ +++ + + L
Sbjct: 23 ECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQL 82
Query: 505 AEELI 509
EEL+
Sbjct: 83 VEELL 87
Score = 31.2 bits (69), Expect = 3.7
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 15/73 (20%)
Query: 136 APRDLLGCPRCRRLLHKPVTLPCGLTVCKRCVEPGPARPQVRRVNVVLSGLLEKCFPAEC 195
A + +L CP C L+ +PV+ C CK C +L L +K P++C
Sbjct: 17 AMQKILECPICLELIKEPVSTKCDHIFCKFC---------------MLKLLNQKKGPSQC 61
Query: 196 RLRRLAGQARSLQ 208
L + RSLQ
Sbjct: 62 PLCKNDITKRSLQ 74
>gi|31377566 ring finger protein 168 [Homo sapiens]
Length = 571
Score = 52.4 bits (124), Expect = 2e-06
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 444 VTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAP-HCPLCKDKLSELL---ASRNF 499
+++ +C +CM +L EPVT PC HT C C + ++ A CP C+ ++S RN
Sbjct: 11 LSECQCGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNS 70
Query: 500 NITVLAEELIFRYLPDELSDRKRIYDEEMSELSN 533
+ V +I ++ P E + R +E E+++
Sbjct: 71 LVNVELWTIIQKHYPREC--KLRASGQESEEVAD 102
Score = 44.7 bits (104), Expect = 3e-04
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 20/91 (21%)
Query: 143 CPRCRRLLHKPVTLPCGLTVCKRCVEPGPAR-----PQVRR---------------VNVV 182
C C +L +PVTLPC T+CK C + + P RR VNV
Sbjct: 16 CGICMEILVEPVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSSWTRYHTRRNSLVNVE 75
Query: 183 LSGLLEKCFPAECRLRRLAGQARSLQRQQQP 213
L +++K +P EC+LR ++ + QP
Sbjct: 76 LWTIIQKHYPRECKLRASGQESEEVADDYQP 106
>gi|37595555 ring finger protein 125 [Homo sapiens]
Length = 232
Score = 52.4 bits (124), Expect = 2e-06
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 414 NAPGKIPKKDLSLQRSPNSETEESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCL 473
+AP + L +R P L VT F+CA+C+ +L +PV T CGH FC C+
Sbjct: 12 SAPASATARALERRRDPE----------LPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCI 61
Query: 474 ERCL-DHAPHCPLCK 487
L ++ CP C+
Sbjct: 62 ATSLKNNKWTCPYCR 76
Score = 33.1 bits (74), Expect = 0.98
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 133 EPRAPRDLLGCPRCRRLLHKPVTLPCGLTVCKRCV 167
+P P C C +LH+PV CG C+ C+
Sbjct: 27 DPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSCI 61
>gi|54792146 tripartite motif-containing 47 [Homo sapiens]
Length = 638
Score = 51.6 bits (122), Expect = 3e-06
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 11/62 (17%)
Query: 447 FECALCMRLLFEPVTTPCGHTFCLKCLERCLDH-----------APHCPLCKDKLSELLA 495
F C +C+ L EPVT PCGH FCL CL H A CPLC++ + L
Sbjct: 7 FSCPICLEPLREPVTLPCGHNFCLACLGALWPHRGASGAGGPGGAARCPLCQEPFPDGLQ 66
Query: 496 SR 497
R
Sbjct: 67 LR 68
Score = 33.9 bits (76), Expect = 0.57
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 143 CPRCRRLLHKPVTLPCGLTVCKRCV 167
CP C L +PVTLPCG C C+
Sbjct: 9 CPICLEPLREPVTLPCGHNFCLACL 33
>gi|210147600 tripartite motif-containing 64 [Homo sapiens]
Length = 449
Score = 50.1 bits (118), Expect = 8e-06
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 436 ESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLD--HAP-HCPLCKDKLSE 492
+S L + + C +C+ +PVT CGH+FC CL C + AP CP C+ K+SE
Sbjct: 2 DSDDLQVFQNELICCICVNYFIDPVTIDCGHSFCRPCLCLCSEEGRAPMRCPSCR-KISE 60
Query: 493 LLASRNFNITVLAEEL 508
NFN V+ ++L
Sbjct: 61 ---KPNFNTNVVLKKL 73
>gi|7706091 bifunctional apoptosis regulator [Homo sapiens]
Length = 450
Score = 50.1 bits (118), Expect = 8e-06
Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 413 LNAPGKIPKKDLSLQRSPNSETEESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKC 472
+ P K + L+R E +S G + V++F C C +L P T CGH+FC C
Sbjct: 1 MEEPQKSYVNTMDLERD---EPLKSTGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHC 57
Query: 473 LER--CLDHAPHCPLCKDKLSELLASRNFNITVLAEELIFRYLPDELSDRKRIYDEEMSE 530
L CP C++K +++L + I + PD + R+ E++ +
Sbjct: 58 LALWWASSKKTECPECREKWEGFP-----KVSILLRDAIEKLFPDAI----RLRFEDIQQ 108
Query: 531 LSNLTRDVPIF 541
+++ + + F
Sbjct: 109 NNDIVQSLAAF 119
Score = 33.9 bits (76), Expect = 0.57
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 13/69 (18%)
Query: 143 CPRCRRLLHKPVTLPCGLTVCKRCVEPGPAR------PQVR-------RVNVVLSGLLEK 189
C C +L P TL CG + C+ C+ A P+ R +V+++L +EK
Sbjct: 34 CHCCYDILVNPTTLNCGHSFCRHCLALWWASSKKTECPECREKWEGFPKVSILLRDAIEK 93
Query: 190 CFPAECRLR 198
FP RLR
Sbjct: 94 LFPDAIRLR 102
>gi|239755486 PREDICTED: tripartite motif-containing protein
64C-like isoform 2 [Homo sapiens]
Length = 447
Score = 49.7 bits (117), Expect = 1e-05
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 436 ESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLD--HAP-HCPLCKDKLSE 492
+S L + + C +C+ +PVTT C H+FC CL C + AP CPLC+ K+SE
Sbjct: 2 DSDTLRVFQNELICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCR-KISE 60
Query: 493 LLASRNFNITVLAEEL 508
NFN V ++L
Sbjct: 61 ---KPNFNTNVALKKL 73
>gi|239755484 PREDICTED: tripartite motif-containing protein
64C-like isoform 1 [Homo sapiens]
Length = 450
Score = 49.7 bits (117), Expect = 1e-05
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 436 ESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLD--HAP-HCPLCKDKLSE 492
+S L + + C +C+ +PVTT C H+FC CL C + AP CPLC+ K+SE
Sbjct: 2 DSDTLRVFQNELICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCR-KISE 60
Query: 493 LLASRNFNITVLAEEL 508
NFN V ++L
Sbjct: 61 ---KPNFNTNVALKKL 73
>gi|239750044 PREDICTED: tripartite motif-containing protein
64C-like isoform 2 [Homo sapiens]
Length = 447
Score = 49.7 bits (117), Expect = 1e-05
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 436 ESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLD--HAP-HCPLCKDKLSE 492
+S L + + C +C+ +PVTT C H+FC CL C + AP CPLC+ K+SE
Sbjct: 2 DSDTLRVFQNELICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCR-KISE 60
Query: 493 LLASRNFNITVLAEEL 508
NFN V ++L
Sbjct: 61 ---KPNFNTNVALKKL 73
>gi|239750042 PREDICTED: tripartite motif-containing protein
64C-like isoform 1 [Homo sapiens]
Length = 450
Score = 49.7 bits (117), Expect = 1e-05
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 436 ESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLD--HAP-HCPLCKDKLSE 492
+S L + + C +C+ +PVTT C H+FC CL C + AP CPLC+ K+SE
Sbjct: 2 DSDTLRVFQNELICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCR-KISE 60
Query: 493 LLASRNFNITVLAEEL 508
NFN V ++L
Sbjct: 61 ---KPNFNTNVALKKL 73
>gi|239744355 PREDICTED: tripartite motif-containing protein
64C-like isoform 1 [Homo sapiens]
Length = 447
Score = 49.7 bits (117), Expect = 1e-05
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 436 ESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLD--HAP-HCPLCKDKLSE 492
+S L + + C +C+ +PVTT C H+FC CL C + AP CPLC+ K+SE
Sbjct: 2 DSDTLRVFQNELICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCR-KISE 60
Query: 493 LLASRNFNITVLAEEL 508
NFN V ++L
Sbjct: 61 ---KPNFNTNVALKKL 73
>gi|239744353 PREDICTED: tripartite motif-containing protein
64C-like isoform 2 [Homo sapiens]
Length = 450
Score = 49.7 bits (117), Expect = 1e-05
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 436 ESQGLSLDVTDFECALCMRLLFEPVTTPCGHTFCLKCLERCLD--HAP-HCPLCKDKLSE 492
+S L + + C +C+ +PVTT C H+FC CL C + AP CPLC+ K+SE
Sbjct: 2 DSDTLRVFQNELICCICVNYFIDPVTTDCVHSFCRPCLCLCSEEGRAPMRCPLCR-KISE 60
Query: 493 LLASRNFNITVLAEEL 508
NFN V ++L
Sbjct: 61 ---KPNFNTNVALKKL 73
>gi|57529737 PDZ domain containing ring finger 3 [Homo sapiens]
Length = 1066
Score = 49.7 bits (117), Expect = 1e-05
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 446 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPL-CKDKLS 491
D +CALC ++L +P+TTPCGH FC C+ + CP C+ +LS
Sbjct: 15 DLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLS 61
Score = 34.3 bits (77), Expect = 0.44
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 20/98 (20%)
Query: 141 LGCPRCRRLLHKPVTLPCGLTVCKRCVEPG-------PARPQVRRVNVVLSGLLEKCFPA 193
L C C ++L P+T PCG C CV P PAR + R L+ +L P
Sbjct: 16 LKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRLSAKELNHVL----PL 71
Query: 194 ECRLRRL--------AGQARSLQRQQQPEAALLRCDQA 223
+ + +L G R ++ QQ PE L RCD A
Sbjct: 72 KRLILKLDIKCAYATRGCGRVVKLQQLPE-HLERCDFA 108
>gi|157426898 tripartite motif-containing 10 isoform 1 [Homo
sapiens]
Length = 481
Score = 49.7 bits (117), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Query: 446 DFECALCMRLLFEPVTTPCGHTFCLKCLERC-------LDHAPHCPLCKD 488
+ C +C L EPVT CGH FC CL R L+ +P CPLCK+
Sbjct: 13 EVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKE 62
Score = 35.4 bits (80), Expect = 0.20
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 139 DLLGCPRCRRLLHKPVTLPCGLTVCKRCVE-----PGP 171
D + CP C+ L +PVT+ CG C+ C+ PGP
Sbjct: 12 DEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGP 49
>gi|157426896 tripartite motif-containing 10 isoform 2 [Homo
sapiens]
Length = 395
Score = 49.7 bits (117), Expect = 1e-05
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 7/50 (14%)
Query: 446 DFECALCMRLLFEPVTTPCGHTFCLKCLERC-------LDHAPHCPLCKD 488
+ C +C L EPVT CGH FC CL R L+ +P CPLCK+
Sbjct: 13 EVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGPDLEESPTCPLCKE 62
Score = 35.4 bits (80), Expect = 0.20
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 139 DLLGCPRCRRLLHKPVTLPCGLTVCKRCVE-----PGP 171
D + CP C+ L +PVT+ CG C+ C+ PGP
Sbjct: 12 DEVNCPICQGTLREPVTIDCGHNFCRACLTRYCEIPGP 49
>gi|109240538 polycomb group ring finger 1 [Homo sapiens]
Length = 259
Score = 49.3 bits (116), Expect = 1e-05
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 449 CALCMRLLFEPVT-TPCGHTFCLKCLERCLDHAPHCPLCKDKLSELLASRNFNITVLAEE 507
C LC + T T C HTFC C+ + L + +CP+C K+ E N + + ++
Sbjct: 47 CCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKYCPMCNIKIHETQPLLNLKLDRVMQD 106
Query: 508 LIFRYLPD-ELSDRKRI 523
++++ +P + S+ KRI
Sbjct: 107 IVYKLVPGLQDSEEKRI 123
>gi|8923898 zinc finger protein 313 [Homo sapiens]
Length = 228
Score = 48.9 bits (115), Expect = 2e-05
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 447 FECALCMRLLFEPVTTPCGHTFCLKCLERCL-DHAPHCPLCKDKLS 491
F C +C+ + +PV PCGH FC CL+ CL P C +C+ L+
Sbjct: 27 FTCPVCLEVYEKPVQVPCGHVFCSACLQECLKPKKPVCGVCRSALA 72
Score = 35.8 bits (81), Expect = 0.15
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 134 PRAPRDLLG---CPRCRRLLHKPVTLPCGLTVCKRCVE 168
P A D LG CP C + KPV +PCG C C++
Sbjct: 17 PAAEADPLGRFTCPVCLEVYEKPVQVPCGHVFCSACLQ 54
>gi|22749269 ring finger protein 129 [Homo sapiens]
Length = 471
Score = 48.5 bits (114), Expect = 2e-05
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 11/110 (10%)
Query: 449 CALCMRLLFEPVTTPCGHTFCLKCLE---RCLDHAPHCPLCKDKLSELLASRNFNITVLA 505
C +C+ L +PVT CGH FC CL + LD CP+C+ RN + L
Sbjct: 16 CPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVCRFCFPYKSFRRNPQLRNLT 75
Query: 506 EELIFRYLPDELSDRKRIYDEEMSELSN------LTRDVPIFVCAMAFPT 549
E I + L S RKR + M E N +D+ I +F T
Sbjct: 76 E--IAKQLQIRRSKRKRQKENAMCEKHNQFLTLFCVKDLEILCTQCSFST 123
Score = 30.8 bits (68), Expect = 4.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 143 CPRCRRLLHKPVTLPCGLTVCKRCV 167
CP C L PVT+ CG C+ C+
Sbjct: 16 CPICLEYLKDPVTINCGHNFCRSCL 40
>gi|21359963 ring finger and WD repeat domain 2 isoform a [Homo
sapiens]
Length = 731
Score = 48.5 bits (114), Expect = 2e-05
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 446 DFECALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCK---DKLSELLASRNFNIT 502
DF C +C ++ E T CGH+FC KC+ + L+ CP C D + L + N
Sbjct: 133 DFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNFLVNEL 192
Query: 503 VLAEELIF 510
+L ++ F
Sbjct: 193 ILKQKQRF 200
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,856,887
Number of Sequences: 37866
Number of extensions: 1731685
Number of successful extensions: 14178
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 214
Number of HSP's that attempted gapping in prelim test: 12862
Number of HSP's gapped (non-prelim): 1390
length of query: 754
length of database: 18,247,518
effective HSP length: 110
effective length of query: 644
effective length of database: 14,082,258
effective search space: 9068974152
effective search space used: 9068974152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.