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Search of human proteins with 148491074
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148491074 crystallin, gamma B [Homo sapiens]
(175 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148491074 crystallin, gamma B [Homo sapiens] 380 e-106
gi|10518338 crystallin, gamma C [Homo sapiens] 303 4e-83
gi|148491057 crystallin, gamma A [Homo sapiens] 291 2e-79
gi|13377002 crystallin, gamma D [Homo sapiens] 283 5e-77
gi|8922120 crystallin, gamma S [Homo sapiens] 218 3e-57
gi|4503063 crystallin, beta B2 [Homo sapiens] 118 3e-27
gi|89886227 absent in melanoma 1-like [Homo sapiens] 117 5e-27
gi|12056461 crystallin, beta A3 [Homo sapiens] 114 4e-26
gi|4758074 crystallin, beta B3 [Homo sapiens] 112 1e-25
gi|4503059 crystallin, beta A4 [Homo sapiens] 110 8e-25
gi|4503061 crystallin, beta B1 [Homo sapiens] 107 7e-24
gi|62988361 absent in melanoma 1 [Homo sapiens] 97 9e-21
gi|16936542 crystallin, beta A2 [Homo sapiens] 94 6e-20
gi|16936540 crystallin, beta A2 [Homo sapiens] 94 6e-20
gi|7019357 crystallin, beta A2 [Homo sapiens] 94 6e-20
gi|21389517 gammaN-crystallin [Homo sapiens] 93 1e-19
gi|90403579 beta-gamma crystallin domain containing 3 [Homo sapi... 85 4e-17
gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens] 32 0.37
gi|7706113 protocadherin 12 precursor [Homo sapiens] 30 0.82
gi|88853069 vitronectin precursor [Homo sapiens] 27 6.9
gi|188595677 integrin, beta 2 precursor [Homo sapiens] 27 9.0
gi|89191865 integrin, beta 2 precursor [Homo sapiens] 27 9.0
gi|197927446 sarcosine dehydrogenase precursor [Homo sapiens] 27 9.0
gi|21361378 sarcosine dehydrogenase precursor [Homo sapiens] 27 9.0
gi|154813197 talpid3 protein [Homo sapiens] 27 9.0
>gi|148491074 crystallin, gamma B [Homo sapiens]
Length = 175
Score = 380 bits (977), Expect = e-106
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MGKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRR 60
MGKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRR
Sbjct: 1 MGKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRR 60
Query: 61 GEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLT 120
GEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLT
Sbjct: 61 GEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLT 120
Query: 121 EIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDLY 175
EIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDLY
Sbjct: 121 EIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDLY 175
>gi|10518338 crystallin, gamma C [Homo sapiens]
Length = 174
Score = 303 bits (777), Expect = 4e-83
Identities = 138/175 (78%), Positives = 158/175 (90%), Gaps = 1/175 (0%)
Query: 1 MGKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRR 60
MGKITFYEDRAFQGRSYE TTDCPNLQPYFSRCNSIRVESGCWM+YERPNYQG QY LRR
Sbjct: 1 MGKITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRR 60
Query: 61 GEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLT 120
GEYPDYQQWMGLSDSIRSCCLI P + ++R+++Y+R++ +G M EL++DC S+QDRFHL+
Sbjct: 61 GEYPDYQQWMGLSDSIRSCCLI-PQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLS 119
Query: 121 EIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDLY 175
EI SL+VLEG W+LYE+PNYRGRQYLLRP EYRR DWGA +AK GSLRRV+DLY
Sbjct: 120 EIRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVDLY 174
>gi|148491057 crystallin, gamma A [Homo sapiens]
Length = 174
Score = 291 bits (745), Expect = 2e-79
Identities = 129/175 (73%), Positives = 153/175 (87%), Gaps = 1/175 (0%)
Query: 1 MGKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRR 60
MGKITFYEDR FQGR Y C +DCPNL+ YFSRCNSIRV+SGCWM+YERPNYQGHQYFLRR
Sbjct: 1 MGKITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRR 60
Query: 61 GEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLT 120
G+YPDYQ WMGLSDS++SC +I PH+ ++++++Y+RD+ RG MSELTDDC V + F L
Sbjct: 61 GKYPDYQHWMGLSDSVQSCRII-PHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLP 119
Query: 121 EIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDLY 175
EI+SL+VLEG W+LYEMPNYRGRQYLLRPG+YRR+ DWG +AKVGSLRRV DLY
Sbjct: 120 EIYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTDLY 174
>gi|13377002 crystallin, gamma D [Homo sapiens]
Length = 174
Score = 283 bits (724), Expect = 5e-77
Identities = 126/173 (72%), Positives = 150/173 (86%), Gaps = 1/173 (0%)
Query: 1 MGKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRR 60
MGKIT YEDR FQGR YEC++D PNLQPY SRCNS RV+SGCWM+YE+PNY G QYFLRR
Sbjct: 1 MGKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRR 60
Query: 61 GEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLT 120
G+Y D+QQWMGLSDS+RSC LI PHSG++R+++Y+R++ RGQM E T+DC +QDRF
Sbjct: 61 GDYADHQQWMGLSDSVRSCRLI-PHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFN 119
Query: 121 EIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMD 173
EIHSLNVLEGSW+LYE+ NYRGRQYLL PG+YRR+ DWGA NA+VGSLRRV+D
Sbjct: 120 EIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVID 172
>gi|8922120 crystallin, gamma S [Homo sapiens]
Length = 178
Score = 218 bits (554), Expect = 3e-57
Identities = 94/172 (54%), Positives = 126/172 (73%), Gaps = 1/172 (0%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGE 62
KITFYED+ FQGR Y+C DC + Y SRCNSI+VE G W +YERPN+ G+ Y L +GE
Sbjct: 7 KITFYEDKNFQGRRYDCDCDCADFHTYLSRCNSIKVEGGTWAVYERPNFAGYMYILPQGE 66
Query: 63 YPDYQQWMGLSDSIRSCCLIP-PHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLTE 121
YP+YQ+WMGL+D + SC + P G Y+++I+++ + GQM E T+DC S+ ++FH+ E
Sbjct: 67 YPEYQRWMGLNDRLSSCRAVHLPSGGQYKIQIFEKGDFSGQMYETTEDCPSIMEQFHMRE 126
Query: 122 IHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMD 173
IHS VLEG WI YE+PNYRGRQYLL EYR+ +DWGA + V S RR+++
Sbjct: 127 IHSCKVLEGVWIFYELPNYRGRQYLLDKKEYRKPIDWGAASPAVQSFRRIVE 178
>gi|4503063 crystallin, beta B2 [Homo sapiens]
Length = 205
Score = 118 bits (295), Expect = 3e-27
Identities = 61/176 (34%), Positives = 99/176 (56%), Gaps = 4/176 (2%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNLQPY-FSRCNSIRVESGCWMIYERPNYQGHQYFLRRG 61
KI +E FQG S+E CPNL+ + S+ V++G W+ YE+ N +G Q+ +G
Sbjct: 18 KIIIFEQENFQGHSHELNGPCPNLKETGVEKAGSVLVQAGPWVGYEQANCKGEQFVFEKG 77
Query: 62 EYPDYQQWMGL--SDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCI-SVQDRFH 118
EYP + W +DS+ S I S +++ +Y+ G+ E+ DD + S +
Sbjct: 78 EYPRWDSWTSSRRTDSLSSLRPIKVDSQEHKIILYENPNFTGKKMEIIDDDVPSFHAHGY 137
Query: 119 LTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDL 174
++ S+ V G+W+ Y+ P YRG QYLL G+Y+ D+GAP+ +V S+RR+ D+
Sbjct: 138 QEKVSSVRVQSGTWVGYQYPGYRGLQYLLEKGDYKDSSDFGAPHPQVQSVRRIRDM 193
>gi|89886227 absent in melanoma 1-like [Homo sapiens]
Length = 616
Score = 117 bits (293), Expect = 5e-27
Identities = 60/175 (34%), Positives = 93/175 (53%), Gaps = 7/175 (4%)
Query: 7 YEDRAFQGRSYECTTDCPNLQ-------PYFSRCNSIRVESGCWMIYERPNYQGHQYFLR 59
YE FQGRS+E + D NLQ P+ + S+RV GCW+ YE+ ++GHQY L
Sbjct: 128 YEAPGFQGRSWEVSRDIYNLQQPEDSQSPHLASVGSLRVLGGCWVGYEKEGFRGHQYLLE 187
Query: 60 RGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHL 119
GEYPD+ W G + + S +I G + +++ + G E++ V+ H
Sbjct: 188 EGEYPDWSHWGGYDELLTSLRVIRTDFGDPAVVLFEAMDFEGHGVEVSKALPDVELVQHG 247
Query: 120 TEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDL 174
+++VL G W+ Y+ + G QY+L G YR DWGA N+ + SL+ V+ +
Sbjct: 248 PSTQAIHVLSGVWVAYQEVGFSGEQYVLEKGVYRNCEDWGAGNSTLASLQPVLQV 302
Score = 83.2 bits (204), Expect = 1e-16
Identities = 52/180 (28%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNLQPYFS--RCNSIRVESGCWMIYERPNYQGHQYFLRR 60
+I+ + + +G + T N Q + S V +G W++Y +P ++ Y L
Sbjct: 29 EISLFSEEGLKGEQVKLTEALKNSQGLEKPLQVASATVSAGLWLLYPKPLFEDTPYILEP 88
Query: 61 GEYPDYQQW------MGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQ 114
GEYP + W +G +R C G R +Y+ +G+ E++ D ++Q
Sbjct: 89 GEYPTSEAWGTSDPSVGSLKPMRLGCPSVEKPGEPRAVVYEAPGFQGRSWEVSRDIYNLQ 148
Query: 115 -----DRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLR 169
HL + SL VL G W+ YE +RG QYLL GEY + WG + + SLR
Sbjct: 149 QPEDSQSPHLASVGSLRVLGGCWVGYEKEGFRGHQYLLEEGEYPDWSHWGGYDELLTSLR 208
Score = 63.2 bits (152), Expect = 1e-10
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
Query: 1 MGKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRR 60
+ KI + F G + D L F R S RV G W++++ N++G Q+ L
Sbjct: 310 VSKIQLFSRPDFLGDHFSFEDDQAALPASF-RPQSCRVHGGSWILFDETNFEGDQHILSE 368
Query: 61 GEYPDYQQWMGLSDSI-RSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHL 119
GE+P L+ ++ S + H + +Y + G+ EL+ + S+Q
Sbjct: 369 GEFPTLTAMGCLASTVLGSLQKVSLHFSEPSIFLYGLECFEGKEIELSREVRSLQAEGFN 428
Query: 120 TEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSL 168
+ S+ + G W+L E ++RGRQ+L+ E +L + +VGSL
Sbjct: 429 NHVLSVRIKGGIWVLCEHSDFRGRQWLVGSCEITNWLTYSG-TQRVGSL 476
>gi|12056461 crystallin, beta A3 [Homo sapiens]
Length = 215
Score = 114 bits (285), Expect = 4e-26
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 17/184 (9%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNL-QPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRG 61
KIT Y+ FQG+ E T+ CPN+ + F S++VESG W+ YE ++ G Q+ L RG
Sbjct: 32 KITIYDQENFQGKRMEFTSSCPNVSERSFDNVRSLKVESGAWIGYEHTSFCGQQFILERG 91
Query: 62 EYPDYQQWMGLSD-------SIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQ 114
EYP + W G + S R C + +M I++++ G+ E++DD S+Q
Sbjct: 92 EYPRWDAWSGSNAYHIERLMSFRPIC--SANHKESKMTIFEKENFIGRQWEISDDYPSLQ 149
Query: 115 DR-FHLTEIHSLNVLEGSWILYEMPNYRGRQYLL----RPGEYRRFLDWG--APNAKVGS 167
+ E+ S+ + G+W+ Y+ P YRG QY+L G+Y+ + +WG A +++ S
Sbjct: 150 AMGWFNNEVGSMKIQSGAWVCYQYPGYRGYQYILECDHHGGDYKHWREWGSHAQTSQIQS 209
Query: 168 LRRV 171
+RR+
Sbjct: 210 IRRI 213
>gi|4758074 crystallin, beta B3 [Homo sapiens]
Length = 211
Score = 112 bits (281), Expect = 1e-25
Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 14/180 (7%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNL-QPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRG 61
K+ YE FQG+ E + +CP+L + SI+VESG W+ +E ++G Q+ L +G
Sbjct: 25 KVILYELENFQGKRCELSAECPSLTDSLLEKVGSIQVESGPWLAFESRAFRGEQFVLEKG 84
Query: 62 EYPDYQQWMGLSDSIRSCCLIPPH--SGAYRMKIYDRDELRGQMSELTDDCI------SV 113
+YP + W DS L P + S +++ +++ G+ E+ DD +
Sbjct: 85 DYPRWDAWSNSRDSDSLLSLRPLNIDSPHHKLHLFENPAFSGRKMEIVDDDVPSLWAHGF 144
Query: 114 QDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMD 173
QDR + S+ + G+W+ YE P YRGRQY+ GEYR + +W A ++ S+RR+ D
Sbjct: 145 QDR-----VASVRAINGTWVGYEFPGYRGRQYVFERGEYRHWNEWDASQPQLQSVRRIRD 199
Score = 53.1 bits (126), Expect = 1e-07
Identities = 23/72 (31%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 87 GAYRMKIYDRDELRGQMSELTDDCISVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYL 146
G+Y++ +Y+ + +G+ EL+ +C S+ D L ++ S+ V G W+ +E +RG Q++
Sbjct: 22 GSYKVILYELENFQGKRCELSAECPSLTDSL-LEKVGSIQVESGPWLAFESRAFRGEQFV 80
Query: 147 LRPGEYRRFLDW 158
L G+Y R+ W
Sbjct: 81 LEKGDYPRWDAW 92
>gi|4503059 crystallin, beta A4 [Homo sapiens]
Length = 196
Score = 110 bits (274), Expect = 8e-25
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 19/185 (10%)
Query: 3 KITFYEDRAFQGRSYECTTDCPN-LQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRG 61
K+ +++ FQGR +E T +CP+ L+ F S++V SG W+ +E +QG QY L RG
Sbjct: 13 KMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERG 72
Query: 62 EYPDYQQWMG--------LSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISV 113
EYP + W G L+ + C S R+ I++++ G+ EL+DD S+
Sbjct: 73 EYPSWDAWGGNTAYPAERLTSFRPAACANHRDS---RLTIFEQENFLGKKGELSDDYPSL 129
Query: 114 QDR-FHLTEIHSLNVLEGSWILYEMPNYRGRQYLL----RPGEYRRFLDWG--APNAKVG 166
Q + E+ S +V G+W+ + P YRG QY+L G+Y+ F +WG AP +V
Sbjct: 130 QAMGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQ 189
Query: 167 SLRRV 171
S+RR+
Sbjct: 190 SIRRI 194
>gi|4503061 crystallin, beta B1 [Homo sapiens]
Length = 252
Score = 107 bits (266), Expect = 7e-24
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 4/175 (2%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNLQPY-FSRCNSIRVESGCWMIYERPNYQGHQYFLRRG 61
++ +E FQGR E + +C NL F R SI V +G W+ +E+ N++G + L +G
Sbjct: 60 RLVVFELENFQGRRAEFSGECSNLADRGFDRVRSIIVSAGPWVAFEQSNFRGEMFILEKG 119
Query: 62 EYPDYQQWMGL--SDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELT-DDCISVQDRFH 118
EYP + W SD + S I + +++ +++ +G E+ DD S+
Sbjct: 120 EYPRWNTWSSSYRSDRLMSFRPIKMDAQEHKISLFEGANFKGNTIEIQGDDAPSLWVYGF 179
Query: 119 LTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMD 173
+ S+ V G+W+ Y+ P YRG QYLL PG++R + +WGA ++ SLRR+ D
Sbjct: 180 SDRVGSVKVSSGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQMQSLRRLRD 234
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 96.7 bits (239), Expect = 9e-21
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 16/185 (8%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNLQPY--------------FSRCNSIRVESGCWMIYER 48
K+ YE F+G+ E T + F+ S++V G W+ YE+
Sbjct: 1219 KVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGDDHLPFTSVGSMKVLRGIWVAYEK 1278
Query: 49 PNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDEL--RGQMSEL 106
P + GHQY L GEY D++ W G + ++S I M +Y +G ++
Sbjct: 1279 PGFTGHQYLLEEGEYRDWKAWGGYNGELQSLRPILGDFSNAHMIMYSEKNFGSKGSSIDV 1338
Query: 107 TDDCISVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVG 166
++++ + + S+NVL G W+ YE P++ G QY+L G Y F DWG N K+
Sbjct: 1339 LGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGKNCKIS 1398
Query: 167 SLRRV 171
S++ +
Sbjct: 1399 SVQPI 1403
Score = 86.7 bits (213), Expect = 1e-17
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 35 SIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMK-- 92
S++V G W+IYE P +QG + L GEYPD W + I S + P G +++
Sbjct: 1158 SMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAYIGS--MRPLKMGGRKVEFP 1215
Query: 93 ------IYDRDELRGQMSEL-TDDCISVQ-----------DRFHLTEIHSLNVLEGSWIL 134
+Y++ G+ EL T C V D T + S+ VL G W+
Sbjct: 1216 TDPKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGDDHLPFTSVGSMKVLRGIWVA 1275
Query: 135 YEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVM 172
YE P + G QYLL GEYR + WG N ++ SLR ++
Sbjct: 1276 YEKPGFTGHQYLLEEGEYRDWKAWGGYNGELQSLRPIL 1313
Score = 84.3 bits (207), Expect = 5e-17
Identities = 50/169 (29%), Positives = 85/169 (50%), Gaps = 5/169 (2%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGE 62
+I + + FQG S + FS S RV G W++Y+ N+ G+QY L G
Sbjct: 1416 QIHLFSEPQFQGHSQSFEETTSQIDDSFST-KSCRVSGGSWVVYDGENFTGNQYVLEEGH 1474
Query: 63 YPDYQQWMGLSD--SIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLT 120
YP MG + +S I + +++R++ +G+ EL + ++++ T
Sbjct: 1475 YPCLSA-MGCPPGATFKSLRFIDVEFSEPTIILFEREDFKGKKIELNAETVNLRSLGFNT 1533
Query: 121 EIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLR 169
+I S+ V+ G W+ YE +YRGRQ+LL P E + ++ ++GSLR
Sbjct: 1534 QIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSGCR-QIGSLR 1581
Score = 73.2 bits (178), Expect = 1e-13
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 2 GKITFYEDRAFQGRSYECTTDCPNLQPY-FSRCNSIRVESGCWMIYERPNYQGHQYFLRR 60
GK+ Y + + E +D + + S I+V GCW++YE+PN++GH L
Sbjct: 1022 GKVVIYSEPDVSEKCIEVFSDIQDCSSWSLSPVILIKVVRGCWILYEQPNFEGHSIPLEE 1081
Query: 61 GEYPDYQQWMGLSDSIR--------------SCCLIPPHSGAYRMKIYDRDELRGQMSEL 106
GE W G+ D + S + + ++ E G +S
Sbjct: 1082 GELELSGLW-GIEDILERHEEAESDKPVVIGSIRHVVQDYRVSHIDLFTEPEGLGILSSY 1140
Query: 107 TDDCISVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVG 166
DD +Q + + S+ V G+W++YE P ++G ++L PGEY W A +G
Sbjct: 1141 FDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAYIG 1200
Query: 167 SLR 169
S+R
Sbjct: 1201 SMR 1203
Score = 72.8 bits (177), Expect = 1e-13
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 14/178 (7%)
Query: 7 YEDRAF--QGRSYECTTDCPNLQP--YFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGE 62
Y ++ F +G S + NL+ Y + SI V SG W+ YE P++ G QY L +G
Sbjct: 1324 YSEKNFGSKGSSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGF 1383
Query: 63 YPDYQQWMGLS---DSIRSCCLIPPHSGAYR---MKIYDRDELRGQMSELTDDCISVQDR 116
Y ++ W G + S++ CL +G R + ++ + +G + + D
Sbjct: 1384 YTSFEDWGGKNCKISSVQPICL-DSFTGPRRRNQIHLFSEPQFQGHSQSFEETTSQIDDS 1442
Query: 117 FHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMDL 174
F S V GSW++Y+ N+ G QY+L G Y G P R +D+
Sbjct: 1443 F---STKSCRVSGGSWVVYDGENFTGNQYVLEEGHYPCLSAMGCPPGATFKSLRFIDV 1497
>gi|16936542 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 94.0 bits (232), Expect = 6e-20
Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 14/182 (7%)
Query: 4 ITFYEDRAFQGRSYECTTDCPNL--QPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRG 61
+T +++ FQGR +DC N+ + R S++VE+G W+ +E P++QG Q+ L +G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 62 EYPDYQQWMGLSDSIRSCCL-----IPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDR 116
+YP + W G S + L + + R+ +++ D +G +L DD S+
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSLPSM 133
Query: 117 -FHLTEIHSLNVLEGSWILYEMPNYRGRQYLL----RPGEYRRFLDWG--APNAKVGSLR 169
+ ++ SL V G+W+ Y+ P YRG QY+L GE+ + + G A ++ S+R
Sbjct: 134 GWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGELGTQAHTGQLQSIR 193
Query: 170 RV 171
RV
Sbjct: 194 RV 195
Score = 46.6 bits (109), Expect = 1e-05
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNLQPY---FSRCNSIRVESGCWMIYERPNYQGHQYFLR 59
++T +E FQG ++ D P+L S++V SG W+ Y+ P Y+G+QY L
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
Query: 60 R----GEYPDY 66
R GE+ Y
Sbjct: 167 RDRHSGEFCTY 177
>gi|16936540 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 94.0 bits (232), Expect = 6e-20
Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 14/182 (7%)
Query: 4 ITFYEDRAFQGRSYECTTDCPNL--QPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRG 61
+T +++ FQGR +DC N+ + R S++VE+G W+ +E P++QG Q+ L +G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 62 EYPDYQQWMGLSDSIRSCCL-----IPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDR 116
+YP + W G S + L + + R+ +++ D +G +L DD S+
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSLPSM 133
Query: 117 -FHLTEIHSLNVLEGSWILYEMPNYRGRQYLL----RPGEYRRFLDWG--APNAKVGSLR 169
+ ++ SL V G+W+ Y+ P YRG QY+L GE+ + + G A ++ S+R
Sbjct: 134 GWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGELGTQAHTGQLQSIR 193
Query: 170 RV 171
RV
Sbjct: 194 RV 195
Score = 46.6 bits (109), Expect = 1e-05
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNLQPY---FSRCNSIRVESGCWMIYERPNYQGHQYFLR 59
++T +E FQG ++ D P+L S++V SG W+ Y+ P Y+G+QY L
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
Query: 60 R----GEYPDY 66
R GE+ Y
Sbjct: 167 RDRHSGEFCTY 177
>gi|7019357 crystallin, beta A2 [Homo sapiens]
Length = 197
Score = 94.0 bits (232), Expect = 6e-20
Identities = 55/182 (30%), Positives = 96/182 (52%), Gaps = 14/182 (7%)
Query: 4 ITFYEDRAFQGRSYECTTDCPNL--QPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRG 61
+T +++ FQGR +DC N+ + R S++VE+G W+ +E P++QG Q+ L +G
Sbjct: 14 LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73
Query: 62 EYPDYQQWMGLSDSIRSCCL-----IPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDR 116
+YP + W G S + L + + R+ +++ D +G +L DD S+
Sbjct: 74 DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDSRVTLFEGDNFQGCKFDLVDDYPSLPSM 133
Query: 117 -FHLTEIHSLNVLEGSWILYEMPNYRGRQYLL----RPGEYRRFLDWG--APNAKVGSLR 169
+ ++ SL V G+W+ Y+ P YRG QY+L GE+ + + G A ++ S+R
Sbjct: 134 GWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGELGTQAHTGQLQSIR 193
Query: 170 RV 171
RV
Sbjct: 194 RV 195
Score = 46.6 bits (109), Expect = 1e-05
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNLQPY---FSRCNSIRVESGCWMIYERPNYQGHQYFLR 59
++T +E FQG ++ D P+L S++V SG W+ Y+ P Y+G+QY L
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166
Query: 60 R----GEYPDY 66
R GE+ Y
Sbjct: 167 RDRHSGEFCTY 177
>gi|21389517 gammaN-crystallin [Homo sapiens]
Length = 182
Score = 93.2 bits (230), Expect = 1e-19
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 2 GKITFYEDRAFQGRSYECTTDCPNLQP--YFSRCNSIRVESGCWMIYERPNYQGHQYFLR 59
GKIT YE + F G+ E DC N Q + +R NSI VESG W+ + P+++G Q+ L
Sbjct: 6 GKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILE 65
Query: 60 RGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDR 116
G+YPD+ +W SD + SC + H +R++I++ GQ E +D +Q R
Sbjct: 66 HGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQSR 122
Score = 63.9 bits (154), Expect = 7e-11
Identities = 26/82 (31%), Positives = 49/82 (59%)
Query: 90 RMKIYDRDELRGQMSELTDDCISVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRP 149
++ +Y+ GQ E+ DC + QDR + ++S++V G+W+ + P++RG+Q++L
Sbjct: 7 KITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILEH 66
Query: 150 GEYRRFLDWGAPNAKVGSLRRV 171
G+Y F W + + +GS R V
Sbjct: 67 GDYPDFFRWNSHSDHMGSCRPV 88
>gi|90403579 beta-gamma crystallin domain containing 3 [Homo
sapiens]
Length = 1022
Score = 84.7 bits (208), Expect = 4e-17
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 3 KITFYEDRAFQGRSYECTTDCPNLQPY------FSRCNSIRVESGCWMIYERPNYQGHQY 56
K+ YE F G++ E + ++ + F R SIRV G W+ YE+ +++G Q+
Sbjct: 532 KVIIYEKPHFHGQAKEFSEHIDSVPNFLKNNGDFHRIGSIRVIGGVWVAYEKEHFKGQQF 591
Query: 57 FLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDR 116
L G++ D LS I S + + + +++ D G+ ++T+ IS +
Sbjct: 592 LLEEGDFEDSNACGALSSPILSFRYLQANFIESSVTLFESDLESGKFIDITNQEISDLEE 651
Query: 117 FHL-TEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRV 171
++ S++V G W+ Y+ + G QY+L G+Y+ F DWG N + S+R +
Sbjct: 652 IGFGSKTRSIHVKSGVWVAYQQKFFCGEQYILEKGKYKCFFDWGGSNNIIMSIRPI 707
Score = 62.8 bits (151), Expect = 1e-10
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 20/180 (11%)
Query: 4 ITFYEDRAFQGRSYECTT-DCPNLQP--YFSRCNSIRVESGCWMIYERPNYQGHQYFLRR 60
+T +E G+ + T + +L+ + S+ SI V+SG W+ Y++ + G QY L +
Sbjct: 626 VTLFESDLESGKFIDITNQEISDLEEIGFGSKTRSIHVKSGVWVAYQQKFFCGEQYILEK 685
Query: 61 GEYPDYQQWMGLSDSIRSCCLI---------PPHSGAYRMKIYDRDELRGQMSELTDDCI 111
G+Y + W G ++ I S I PPH +K + + +G+ + T++
Sbjct: 686 GKYKCFFDWGGSNNIIMSIRPIQLEPLGINEPPHL----LKAFSKPGFQGECIDFTEETS 741
Query: 112 SVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRV 171
+ S VL G W+LY + +L G Y G P +KV SL+ +
Sbjct: 742 DLTSLMPC----SFKVLRGCWLLYYQEDMFVNHCVLEEGLYADLTSCGCPASKVKSLKPI 797
Score = 51.6 bits (122), Expect = 3e-07
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 24 PNLQPY-FSRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLI 82
PNL+ S+ S V+SG W+ Y N++G L D+ + + ++S L
Sbjct: 463 PNLEELNISKSVSFTVKSGVWLAYPDINFKGQATVLEE----DHGLFEISTAEMKS--LH 516
Query: 83 PPHSGAYRMK--------IYDRDELRGQMSELTDDCISVQD------RFHLTEIHSLNVL 128
P G +++ IY++ GQ E ++ SV + FH I S+ V+
Sbjct: 517 PLQMGGLKVEMPMNLKVIIYEKPHFHGQAKEFSEHIDSVPNFLKNNGDFH--RIGSIRVI 574
Query: 129 EGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLR 169
G W+ YE +++G+Q+LL G++ GA ++ + S R
Sbjct: 575 GGVWVAYEKEHFKGQQFLLEEGDFEDSNACGALSSPILSFR 615
Score = 49.3 bits (116), Expect = 2e-06
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 12 FQGRSY---ECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQ 68
FQG E T+D +L P S +V GCW++Y + + + L G Y D
Sbjct: 729 FQGECIDFTEETSDLTSLMPC-----SFKVLRGCWLLYYQEDMFVNHCVLEEGLYADLTS 783
Query: 69 WMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLTEIHSLNVL 128
+ ++S I + ++ + G+ L + SV ++ S+ V
Sbjct: 784 CGCPASKVKSLKPIDYVFEEPSISLFALEHCEGRELHLEEAVNSVLNKDLHFYTQSVWVK 843
Query: 129 EGSWILYEMPNYRGRQYLLRPGE---YRRFLDWGAPNAKVGSLR 169
G WI YE N+ GRQ LLRP E + F W +GSLR
Sbjct: 844 SGLWIAYEGSNFLGRQILLRPNEIPNWTAFSRW----KTIGSLR 883
Score = 41.2 bits (95), Expect = 5e-04
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 125 LNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAK-------VGSLRRVM 172
+ V+ G WILYE P++RG++ +L GE DW N + +GSL+RV+
Sbjct: 381 IKVVRGCWILYEKPHFRGQKCVLEEGEKVLNRDWILQNRRHPQRNFILGSLKRVL 435
Score = 38.5 bits (88), Expect = 0.003
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 30/130 (23%)
Query: 36 IRVESGCWMIYERPNYQGHQYFLRRGEYPDYQQW-------------MGLSDSIRSCCLI 82
I+V GCW++YE+P+++G + L GE + W +G + C I
Sbjct: 381 IKVVRGCWILYEKPHFRGQKCVLEEGEKVLNRDWILQNRRHPQRNFILGSLKRVLKDCSI 440
Query: 83 P-----PHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLTEIHSLNVLEGSWILYEM 137
P P S +Y + + ++++ S V G W+ Y
Sbjct: 441 PEIELFPQSDPACCPVY------------IQRAVPNLEELNISKSVSFTVKSGVWLAYPD 488
Query: 138 PNYRGRQYLL 147
N++G+ +L
Sbjct: 489 INFKGQATVL 498
>gi|153792694 baculoviral IAP repeat-containing 6 [Homo sapiens]
Length = 4857
Score = 31.6 bits (70), Expect = 0.37
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 34/127 (26%)
Query: 42 CWMIYERPNYQGHQYFLRRGEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRG 101
C M + PNY + L G WMG++ PP +R+ + D + +
Sbjct: 3547 CSMCHVHPNY----FSLLMG-------WMGITP--------PPVQCHHRLSMTDDSKKQD 3587
Query: 102 QMSELTDDCISVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAP 161
S LTDD + Q LTE H + S P ++ LD G P
Sbjct: 3588 LSSSLTDDSKNAQAPLALTESHLATLASSS---------------QSPEAIKQLLDSGLP 3632
Query: 162 NAKVGSL 168
+ V SL
Sbjct: 3633 SLLVRSL 3639
>gi|7706113 protocadherin 12 precursor [Homo sapiens]
Length = 1184
Score = 30.4 bits (67), Expect = 0.82
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 100 RGQMSELTDDCISVQDRFHLTEIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFL-DW 158
R + ELT D VQ +I L L PN+RG +YL +PG R + D
Sbjct: 946 RNPVEELTVDSPPVQ------QISQLLSLLHQGQFQPKPNHRGNKYLAKPGGSRSAIPDT 999
Query: 159 GAPNAKVG 166
P+A+ G
Sbjct: 1000 DGPSARAG 1007
>gi|88853069 vitronectin precursor [Homo sapiens]
Length = 478
Score = 27.3 bits (59), Expect = 6.9
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 14/63 (22%)
Query: 46 YERPNYQGHQYFLRRGEY---------PDYQQ-----WMGLSDSIRSCCLIPPHSGAYRM 91
+ R N QG Y + +Y PDY + + G+ D++ + +P HS + R
Sbjct: 210 FTRINCQGKTYLFKGSQYWRFEDGVLDPDYPRNISDGFDGIPDNVDAALALPAHSYSGRE 269
Query: 92 KIY 94
++Y
Sbjct: 270 RVY 272
>gi|188595677 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 26.9 bits (58), Expect = 9.0
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 19 CTTDCPNLQ----PYFSRCNSIRVESGCWMIYERPNYQGHQYFL 58
C+ CP LQ P R R GCW+ Y G +L
Sbjct: 643 CSAACPGLQLSNNPVKGRTCKERDSEGCWVAYTLEQQDGMDRYL 686
>gi|89191865 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 26.9 bits (58), Expect = 9.0
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 4/44 (9%)
Query: 19 CTTDCPNLQ----PYFSRCNSIRVESGCWMIYERPNYQGHQYFL 58
C+ CP LQ P R R GCW+ Y G +L
Sbjct: 643 CSAACPGLQLSNNPVKGRTCKERDSEGCWVAYTLEQQDGMDRYL 686
>gi|197927446 sarcosine dehydrogenase precursor [Homo sapiens]
Length = 918
Score = 26.9 bits (58), Expect = 9.0
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 12/61 (19%)
Query: 22 DCPNLQPYFSRCN----SIRVESGC------WMIYERPNYQGHQYFLRRGEY--PDYQQW 69
+ P L+ +F C + + GC W+I+ RP H Y +RR + D+ +W
Sbjct: 396 EAPELRGFFLGCGFNSAGMMLGGGCGQELAHWIIHGRPEKDMHGYDIRRFHHSLTDHPRW 455
Query: 70 M 70
+
Sbjct: 456 I 456
>gi|21361378 sarcosine dehydrogenase precursor [Homo sapiens]
Length = 918
Score = 26.9 bits (58), Expect = 9.0
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 12/61 (19%)
Query: 22 DCPNLQPYFSRCN----SIRVESGC------WMIYERPNYQGHQYFLRRGEY--PDYQQW 69
+ P L+ +F C + + GC W+I+ RP H Y +RR + D+ +W
Sbjct: 396 EAPELRGFFLGCGFNSAGMMLGGGCGQELAHWIIHGRPEKDMHGYDIRRFHHSLTDHPRW 455
Query: 70 M 70
+
Sbjct: 456 I 456
>gi|154813197 talpid3 protein [Homo sapiens]
Length = 1472
Score = 26.9 bits (58), Expect = 9.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 36 IRVESGCWMIYERPNYQGHQYFLRRGEY 63
I+ E +Y +P YQGH+ L++G Y
Sbjct: 561 IQDEDYMLQVYGKPVYQGHRSTLKKGPY 588
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.141 0.469
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,359,916
Number of Sequences: 37866
Number of extensions: 318883
Number of successful extensions: 773
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 660
Number of HSP's gapped (non-prelim): 47
length of query: 175
length of database: 18,247,518
effective HSP length: 95
effective length of query: 80
effective length of database: 14,650,248
effective search space: 1172019840
effective search space used: 1172019840
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.