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Search of human proteins with 14670352
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14670352 general transcription factor II, i isoform 2 [Homo
sapiens]
(978 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14670352 general transcription factor II, i isoform 2 [Homo s... 1955 0.0
gi|14670350 general transcription factor II, i isoform 1 [Homo s... 1943 0.0
gi|169881252 general transcription factor II, i isoform 4 [Homo ... 1902 0.0
gi|14670354 general transcription factor II, i isoform 3 [Homo s... 1890 0.0
gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens] 472 e-133
gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens] 472 e-133
gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo sapi... 383 e-106
gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo sap... 377 e-104
gi|239746033 PREDICTED: hypothetical protein XP_002344174 [Homo ... 159 2e-38
gi|239754606 PREDICTED: similar to hCG1983816 [Homo sapiens] 131 3e-30
gi|239749152 PREDICTED: similar to hCG1983816 [Homo sapiens] 131 3e-30
gi|239508897 PREDICTED: similar to hCG1983816 [Homo sapiens] 131 3e-30
gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo sap... 129 1e-29
gi|239752592 PREDICTED: hypothetical protein XP_002348308, parti... 129 2e-29
gi|239740995 PREDICTED: hypothetical protein XP_002342058 [Homo ... 113 8e-25
gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens] 46 2e-04
gi|110349719 titin isoform N2-A [Homo sapiens] 44 7e-04
gi|146232000 checkpoint suppressor 1 isoform 1 [Homo sapiens] 36 0.15
gi|51093865 checkpoint suppressor 1 isoform 2 [Homo sapiens] 36 0.15
gi|28872812 MORC family CW-type zinc finger 3 [Homo sapiens] 36 0.15
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 36 0.15
gi|55741677 SET domain containing 1A [Homo sapiens] 36 0.20
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 35 0.45
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 35 0.45
gi|4557719 DNA ligase I [Homo sapiens] 34 0.59
gi|190684675 X-ray repair cross complementing protein 1 [Homo sa... 34 0.77
gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens] 34 0.77
gi|239757124 PREDICTED: hypothetical protein [Homo sapiens] 33 1.00
gi|113428448 PREDICTED: hypothetical protein [Homo sapiens] 33 1.00
gi|169213522 PREDICTED: hypothetical protein [Homo sapiens] 33 1.00
>gi|14670352 general transcription factor II, i isoform 2 [Homo
sapiens]
Length = 978
Score = 1955 bits (5065), Expect = 0.0
Identities = 978/978 (100%), Positives = 978/978 (100%)
Query: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
Sbjct: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
Query: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
Sbjct: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
Query: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
Sbjct: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
Query: 241 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSP 300
EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSP
Sbjct: 241 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSP 300
Query: 301 PSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK 360
PSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK
Sbjct: 301 PSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK 360
Query: 361 GPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLN 420
GPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLN
Sbjct: 361 GPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLN 420
Query: 421 STREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPN 480
STREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPN
Sbjct: 421 STREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPN 480
Query: 481 DLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPV 540
DLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPV
Sbjct: 481 DLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPV 540
Query: 541 KEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRS 600
KEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRS
Sbjct: 541 KEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRS 600
Query: 601 PTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSK 660
PTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSK
Sbjct: 601 PTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSK 660
Query: 661 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENL 720
VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENL
Sbjct: 661 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENL 720
Query: 721 FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK 780
FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK
Sbjct: 721 FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK 780
Query: 781 IKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLS 840
IKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLS
Sbjct: 781 IKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLS 840
Query: 841 KVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSY 900
KVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSY
Sbjct: 841 KVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSY 900
Query: 901 LEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEE 960
LEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEE
Sbjct: 901 LEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEE 960
Query: 961 IKETDGSSQIKQEPDPTW 978
IKETDGSSQIKQEPDPTW
Sbjct: 961 IKETDGSSQIKQEPDPTW 978
>gi|14670350 general transcription factor II, i isoform 1 [Homo
sapiens]
Length = 998
Score = 1943 bits (5034), Expect = 0.0
Identities = 978/998 (97%), Positives = 978/998 (97%), Gaps = 20/998 (2%)
Query: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
Sbjct: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
Query: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
Sbjct: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
Query: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
Sbjct: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
Query: 241 EESEDPDYYQYNIQ--------------------GSHHSSEGNEGTEMEVPAEDSTQHVP 280
EESEDPDYYQYNIQ GSHHSSEGNEGTEMEVPAEDSTQHVP
Sbjct: 241 EESEDPDYYQYNIQAGPSETDDVDEKQPLSKPLQGSHHSSEGNEGTEMEVPAEDSTQHVP 300
Query: 281 SETSEDPEVEVTIEDDDYSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITD 340
SETSEDPEVEVTIEDDDYSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITD
Sbjct: 301 SETSEDPEVEVTIEDDDYSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITD 360
Query: 341 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE 400
LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE
Sbjct: 361 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE 420
Query: 401 RILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAE 460
RILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAE
Sbjct: 421 RILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAE 480
Query: 461 ALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKR 520
ALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKR
Sbjct: 481 ALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKR 540
Query: 521 PELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVF 580
PELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVF
Sbjct: 541 PELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVF 600
Query: 581 ESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASK 640
ESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASK
Sbjct: 601 ESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASK 660
Query: 641 INTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGRE 700
INTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGRE
Sbjct: 661 INTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGRE 720
Query: 701 FSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPF 760
FSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPF
Sbjct: 721 FSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPF 780
Query: 761 RRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASG 820
RRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASG
Sbjct: 781 RRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASG 840
Query: 821 VEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITIN 880
VEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITIN
Sbjct: 841 VEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITIN 900
Query: 881 PGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESE 940
PGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESE
Sbjct: 901 PGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESE 960
Query: 941 GPVIQESAEPSQLEVPATEEIKETDGSSQIKQEPDPTW 978
GPVIQESAEPSQLEVPATEEIKETDGSSQIKQEPDPTW
Sbjct: 961 GPVIQESAEPSQLEVPATEEIKETDGSSQIKQEPDPTW 998
>gi|169881252 general transcription factor II, i isoform 4 [Homo
sapiens]
Length = 957
Score = 1902 bits (4926), Expect = 0.0
Identities = 957/978 (97%), Positives = 957/978 (97%), Gaps = 21/978 (2%)
Query: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
Sbjct: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
Query: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
Sbjct: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
Query: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
Sbjct: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
Query: 241 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSP 300
EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPA EDDDYSP
Sbjct: 241 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPA---------------------EDDDYSP 279
Query: 301 PSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK 360
PSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK
Sbjct: 280 PSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK 339
Query: 361 GPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLN 420
GPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLN
Sbjct: 340 GPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLN 399
Query: 421 STREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPN 480
STREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPN
Sbjct: 400 STREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPN 459
Query: 481 DLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPV 540
DLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPV
Sbjct: 460 DLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPV 519
Query: 541 KEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRS 600
KEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRS
Sbjct: 520 KEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRS 579
Query: 601 PTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSK 660
PTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSK
Sbjct: 580 PTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSK 639
Query: 661 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENL 720
VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENL
Sbjct: 640 VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENL 699
Query: 721 FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK 780
FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK
Sbjct: 700 FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK 759
Query: 781 IKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLS 840
IKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLS
Sbjct: 760 IKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLS 819
Query: 841 KVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSY 900
KVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSY
Sbjct: 820 KVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSY 879
Query: 901 LEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEE 960
LEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEE
Sbjct: 880 LEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESEGPVIQESAEPSQLEVPATEE 939
Query: 961 IKETDGSSQIKQEPDPTW 978
IKETDGSSQIKQEPDPTW
Sbjct: 940 IKETDGSSQIKQEPDPTW 957
>gi|14670354 general transcription factor II, i isoform 3 [Homo
sapiens]
Length = 977
Score = 1890 bits (4895), Expect = 0.0
Identities = 957/998 (95%), Positives = 957/998 (95%), Gaps = 41/998 (4%)
Query: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF
Sbjct: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
Query: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI
Sbjct: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
Query: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK
Sbjct: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
Query: 241 EESEDPDYYQYNIQ--------------------GSHHSSEGNEGTEMEVPAEDSTQHVP 280
EESEDPDYYQYNIQ GSHHSSEGNEGTEMEVPA
Sbjct: 241 EESEDPDYYQYNIQAGPSETDDVDEKQPLSKPLQGSHHSSEGNEGTEMEVPA-------- 292
Query: 281 SETSEDPEVEVTIEDDDYSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITD 340
EDDDYSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITD
Sbjct: 293 -------------EDDDYSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITD 339
Query: 341 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE 400
LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE
Sbjct: 340 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE 399
Query: 401 RILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAE 460
RILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAE
Sbjct: 400 RILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAE 459
Query: 461 ALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKR 520
ALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKR
Sbjct: 460 ALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKR 519
Query: 521 PELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVF 580
PELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVF
Sbjct: 520 PELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGLTEAVKVPYPVF 579
Query: 581 ESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASK 640
ESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASK
Sbjct: 580 ESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASK 639
Query: 641 INTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGRE 700
INTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGRE
Sbjct: 640 INTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGRE 699
Query: 701 FSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPF 760
FSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPF
Sbjct: 700 FSFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPF 759
Query: 761 RRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASG 820
RRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASG
Sbjct: 760 RRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTASG 819
Query: 821 VEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITIN 880
VEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITIN
Sbjct: 820 VEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFPVKVPYRKITIN 879
Query: 881 PGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESE 940
PGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESE
Sbjct: 880 PGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVINNQLVDQSESE 939
Query: 941 GPVIQESAEPSQLEVPATEEIKETDGSSQIKQEPDPTW 978
GPVIQESAEPSQLEVPATEEIKETDGSSQIKQEPDPTW
Sbjct: 940 GPVIQESAEPSQLEVPATEEIKETDGSSQIKQEPDPTW 977
>gi|48762700 GTF2I repeat domain containing 2 [Homo sapiens]
Length = 949
Score = 472 bits (1215), Expect = e-133
Identities = 265/448 (59%), Positives = 313/448 (69%), Gaps = 25/448 (5%)
Query: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVA+STLPVE+E SSE+RMVVTFL+SALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
RG AFVN R DFQKDF KYCV E + ++K N M V + E E LRK VEDYF
Sbjct: 61 RGCAFVNARTDFQKDFAKYCVAEG-----LCEVKPPCPVNGMQVHSGETEILRKAVEDYF 115
Query: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
CFCYGKALG + +VPVPYEKMLRDQSAVVVQGLPEGVAF+HPENYDLATLKWILENKAGI
Sbjct: 116 CFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGI 175
Query: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
SFII RPFL P+ +GG MVTDA+RSI+SP SCGPI VKTEP EDSGISL+ AV+VK
Sbjct: 176 SFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVK 235
Query: 241 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPS-ETSEDPEVEVTIEDDDYS 299
+ESEDP+YYQYN+QGSH SS NE EME+P EDST VPS E +EDPE EV IE + S
Sbjct: 236 KESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNS 295
Query: 300 PPSKRPKAN----ELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQ 355
A + Q VP+ K R + EK I LR+QV +LF RK+ +
Sbjct: 296 SSVTNSAAGVEDLNIVQVTVPD-----NEKERLSSIEK----IKQLREQVNDLFSRKFGE 346
Query: 356 AIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKK 415
AI PV +PY + + ++G+P G+ F+ P I + RIL A E I+F + +
Sbjct: 347 AIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIR 406
Query: 416 H----ELLNSTREDLQLDKPASGVKEEW 439
EL N + ++D+ +E+W
Sbjct: 407 PLPGLELSNVGKR--KIDQEGRVFQEKW 432
Score = 205 bits (521), Expect = 2e-52
Identities = 100/140 (71%), Positives = 118/140 (84%)
Query: 810 SSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFP 869
+S +V +A+GVEDLNI+QVT+PD++ ERLS +EK +QLREQVNDLFSRKFGEAIG+ FP
Sbjct: 294 NSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFP 353
Query: 870 VKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVI 929
VKVPYRKIT NPGCVV+DGMPPGV FKAP YLEISSMRRIL++AEFIKFTVIRP PGL +
Sbjct: 354 VKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLEL 413
Query: 930 NNQLVDQSESEGPVIQESAE 949
+N + + EG V QE E
Sbjct: 414 SNVGKRKIDQEGRVFQEKWE 433
Score = 90.1 bits (222), Expect = 9e-18
Identities = 83/305 (27%), Positives = 131/305 (42%), Gaps = 23/305 (7%)
Query: 341 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE 400
LRK VE+ F Y +A+ V +PY + V+GLPEG+ F+ P Y + L+
Sbjct: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
Query: 401 RILLAKERIRFVIKKHEL-----LNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFC 455
IL K I F+I + L L ++ E K M D
Sbjct: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
Query: 456 KKFAEALGSTEAKAVP----YQKFEAHPN---------DLYVEGLPENIPFRSPSWYGIP 502
K AEA+ + P Y +HP+ +L +E +P P+ P
Sbjct: 227 LK-AEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPN--EDP 283
Query: 503 RLEKIIQVGNRIKFVIKRPELLTH-STTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNL 561
E I+ V + + +VT P N + +I +LR+QV ++F+
Sbjct: 284 EAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVP-DNEKERLSSIEKIKQLREQVNDLFSR 342
Query: 562 KFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKF 621
KF +A+G+ VKVPY NP + ++G+P G+ F++P + I + RI+ + IKF
Sbjct: 343 KFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKF 402
Query: 622 VVKKP 626
V +P
Sbjct: 403 TVIRP 407
Score = 85.5 bits (210), Expect = 2e-16
Identities = 80/308 (25%), Positives = 127/308 (41%), Gaps = 77/308 (25%)
Query: 551 LRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLE 610
LRK VE+ F + +ALG T V VPY + + V+GLPEG+ F+ P + + L+
Sbjct: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
Query: 611 RIVRGSNKIKFVVKKPEL------------------VISYLPPGMASKINTK-------- 644
I+ I F++ +P L ++S P IN K
Sbjct: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVS--PSESCGPINVKTEPMEDSG 224
Query: 645 ------ALQSPKRPRSP-------------GSNSKVPEIEVTVEGPN--------NNNPQ 677
A+ K P ++++V E+E+ +E N +P+
Sbjct: 225 ISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPE 284
Query: 678 TSAVRTPTQTNGSN-----------------VPFKPRGREFSFEAWNAKITDLKQKVENL 720
+ V+ TN S+ VP + R S E KI L+++V +L
Sbjct: 285 -AEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIE----KIKQLREQVNDL 339
Query: 721 FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK 780
F+ K GEA+G+ VKVP+ P ++G+P GV F+ P I + +IL
Sbjct: 340 FSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEF 399
Query: 781 IKFIIKKP 788
IKF + +P
Sbjct: 400 IKFTVIRP 407
Score = 65.9 bits (159), Expect = 2e-10
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 848 LREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMR 907
LR+ V D F +G+A+G V VPY K+ + VVV G+P GV+F+ P ++++++
Sbjct: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
Query: 908 RILDSAEFIKFTVIRPF---------PGLVIN--NQLVDQSESEGP--VIQESAEPSQLE 954
IL++ I F + RPF PG+V + +V SES GP V E E S +
Sbjct: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
Query: 955 VPATEEIKETDGSSQIKQEPDPTW 978
+ A + S K+ DP +
Sbjct: 227 LKA-------EAVSVKKESEDPNY 243
>gi|51241788 GTF2I repeat domain containing 2B [Homo sapiens]
Length = 949
Score = 472 bits (1215), Expect = e-133
Identities = 265/448 (59%), Positives = 313/448 (69%), Gaps = 25/448 (5%)
Query: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
MAQVA+STLPVE+E SSE+RMVVTFL+SALESMCKELAKSKAEVACIAVYETDVFVVGTE
Sbjct: 1 MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTE 60
Query: 61 RGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDYF 120
RG AFVN R DFQKDF KYCV E + ++K N M V + E E LRK VEDYF
Sbjct: 61 RGCAFVNARTDFQKDFAKYCVAEG-----LCEVKPPCPVNGMQVHSGETEILRKAVEDYF 115
Query: 121 CFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGI 180
CFCYGKALG + +VPVPYEKMLRDQSAVVVQGLPEGVAF+HPENYDLATLKWILENKAGI
Sbjct: 116 CFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGI 175
Query: 181 SFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVK 240
SFII RPFL P+ +GG MVTDA+RSI+SP SCGPI VKTEP EDSGISL+ AV+VK
Sbjct: 176 SFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVK 235
Query: 241 EESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPS-ETSEDPEVEVTIEDDDYS 299
+ESEDP+YYQYN+QGSH SS NE EME+P EDST VPS E +EDPE EV IE + S
Sbjct: 236 KESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNS 295
Query: 300 PPSKRPKAN----ELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQ 355
A + Q VP+ K R + EK I LR+QV +LF RK+ +
Sbjct: 296 SSVTNSAAGVEDLNIVQVTVPD-----NEKERLSSIEK----IKQLREQVNDLFSRKFGE 346
Query: 356 AIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKK 415
AI PV +PY + + ++G+P G+ F+ P I + RIL A E I+F + +
Sbjct: 347 AIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIR 406
Query: 416 H----ELLNSTREDLQLDKPASGVKEEW 439
EL N + ++D+ +E+W
Sbjct: 407 PLPGLELSNVGKR--KIDQEGRVFQEKW 432
Score = 205 bits (521), Expect = 2e-52
Identities = 100/140 (71%), Positives = 118/140 (84%)
Query: 810 SSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGMGFP 869
+S +V +A+GVEDLNI+QVT+PD++ ERLS +EK +QLREQVNDLFSRKFGEAIG+ FP
Sbjct: 294 NSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFP 353
Query: 870 VKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRPFPGLVI 929
VKVPYRKIT NPGCVV+DGMPPGV FKAP YLEISSMRRIL++AEFIKFTVIRP PGL +
Sbjct: 354 VKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLEL 413
Query: 930 NNQLVDQSESEGPVIQESAE 949
+N + + EG V QE E
Sbjct: 414 SNVGKRKIDQEGRVFQEKWE 433
Score = 90.1 bits (222), Expect = 9e-18
Identities = 83/305 (27%), Positives = 131/305 (42%), Gaps = 23/305 (7%)
Query: 341 LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLE 400
LRK VE+ F Y +A+ V +PY + V+GLPEG+ F+ P Y + L+
Sbjct: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
Query: 401 RILLAKERIRFVIKKHEL-----LNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFC 455
IL K I F+I + L L ++ E K M D
Sbjct: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
Query: 456 KKFAEALGSTEAKAVP----YQKFEAHPN---------DLYVEGLPENIPFRSPSWYGIP 502
K AEA+ + P Y +HP+ +L +E +P P+ P
Sbjct: 227 LK-AEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPN--EDP 283
Query: 503 RLEKIIQVGNRIKFVIKRPELLTH-STTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNL 561
E I+ V + + +VT P N + +I +LR+QV ++F+
Sbjct: 284 EAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVP-DNEKERLSSIEKIKQLREQVNDLFSR 342
Query: 562 KFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKF 621
KF +A+G+ VKVPY NP + ++G+P G+ F++P + I + RI+ + IKF
Sbjct: 343 KFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKF 402
Query: 622 VVKKP 626
V +P
Sbjct: 403 TVIRP 407
Score = 85.5 bits (210), Expect = 2e-16
Identities = 80/308 (25%), Positives = 127/308 (41%), Gaps = 77/308 (25%)
Query: 551 LRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLE 610
LRK VE+ F + +ALG T V VPY + + V+GLPEG+ F+ P + + L+
Sbjct: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
Query: 611 RIVRGSNKIKFVVKKPEL------------------VISYLPPGMASKINTK-------- 644
I+ I F++ +P L ++S P IN K
Sbjct: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVS--PSESCGPINVKTEPMEDSG 224
Query: 645 ------ALQSPKRPRSP-------------GSNSKVPEIEVTVEGPN--------NNNPQ 677
A+ K P ++++V E+E+ +E N +P+
Sbjct: 225 ISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPE 284
Query: 678 TSAVRTPTQTNGSN-----------------VPFKPRGREFSFEAWNAKITDLKQKVENL 720
+ V+ TN S+ VP + R S E KI L+++V +L
Sbjct: 285 -AEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIE----KIKQLREQVNDL 339
Query: 721 FNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAK 780
F+ K GEA+G+ VKVP+ P ++G+P GV F+ P I + +IL
Sbjct: 340 FSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEF 399
Query: 781 IKFIIKKP 788
IKF + +P
Sbjct: 400 IKFTVIRP 407
Score = 65.9 bits (159), Expect = 2e-10
Identities = 47/144 (32%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 848 LREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMR 907
LR+ V D F +G+A+G V VPY K+ + VVV G+P GV+F+ P ++++++
Sbjct: 107 LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLK 166
Query: 908 RILDSAEFIKFTVIRPF---------PGLVIN--NQLVDQSESEGP--VIQESAEPSQLE 954
IL++ I F + RPF PG+V + +V SES GP V E E S +
Sbjct: 167 WILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGIS 226
Query: 955 VPATEEIKETDGSSQIKQEPDPTW 978
+ A + S K+ DP +
Sbjct: 227 LKA-------EAVSVKKESEDPNY 243
>gi|7705387 GTF2I repeat domain containing 1 isoform 1 [Homo
sapiens]
Length = 959
Score = 383 bits (983), Expect = e-106
Identities = 305/980 (31%), Positives = 472/980 (48%), Gaps = 170/980 (17%)
Query: 22 VVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRAFVNTRKDFQKDFVKYCV 81
++T L+SAL+SMC L+K AEVAC+AV++ FVVGTE+GR F+N RK+ Q DF+++C
Sbjct: 30 IITSLVSALDSMCSALSKLNAEVACVAVHDESAFVVGTEKGRMFLNARKELQSDFLRFCR 89
Query: 82 EEEEKAAEMHKMKSTTQAN-------RMSVD-AVEIETLRKTVEDYFCFCYGKALGKSTV 133
K E K + R S++ ++ LRK VE+ F Y +ALG+++V
Sbjct: 90 GPPWKDPEAEHPKKVQRGEGGGRSLPRSSLEHGSDVYLLRKMVEEVFDVLYSEALGRASV 149
Query: 134 VPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKRPFLEPKK 193
VP+PYE++LR+ + VQGLPEG+AF+ P YD L ILE+ I F +KRP +
Sbjct: 150 VPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPLED--- 206
Query: 194 HVGGR--VMVTDADRSILSPGGS--CG----PIKVKTEPTEDSGISLEMAAVTVKEESED 245
GGR + + + L P GS CG KV + + S MA+
Sbjct: 207 --GGRDSKALVELNGVSLIPKGSRDCGLHGQAPKVPPQDLPPTATSSSMAS--------- 255
Query: 246 PDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSE---TSEDPEVEVTIEDDDYSPPS 302
+ Y+ +H+ + E P S PS+ + PE + T D
Sbjct: 256 ---FLYSTALPNHAI---RELKQEAP---SCPLAPSDLGLSRPMPEPKATGAQDFSDCCG 306
Query: 303 KRPKANELPQPPVPEPANAGKR---KVREFNFEKWNARITD------LRKQVEELFERKY 353
++P P P+ + +A KR + EKW+A I + LR+ V+ LF +Y
Sbjct: 307 QKPTG---PGGPLIQNVHASKRILFSIVHDKSEKWDAFIKETEDINTLRECVQILFNSRY 363
Query: 354 AQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVI 413
A+A+ V +PY E + + G+P+ IPF+RP TYG+P+L+RIL + I F+I
Sbjct: 364 AEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIHFII 423
Query: 414 KK--HELL---NSTREDLQLDKPASGVKE--EWYARITKLRKMVDQLFCK-KFAEALG-S 464
K+ E + N +D +PAS ++ +R T L + K +E G
Sbjct: 424 KRMFDERIFTGNKFTKDTTKLEPASPPEDTSAEVSRATVLDLAGNARSDKGSMSEDCGPG 483
Query: 465 TEAKAVPYQKFEAHPNDLYV------------EGLPENIPFRSP---SWYGIPRLEKIIQ 509
T + + + P DL + E + +++P P S YG+
Sbjct: 484 TSGELGGLRPIKIEPEDLDIIQVTVPDPSPTSEEMTDSMPGHLPSEDSGYGM-------- 535
Query: 510 VGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGL 569
E+LT PV++ I LRKQVE +FN ++A+A+G+
Sbjct: 536 ------------EMLTDKGLSEDARPEERPVEDSHGDVIRPLRKQVELLFNTRYAKAIGI 583
Query: 570 TEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELV 629
+E VKVPY F +PE L+V GLPEGI R P FGI +L +I+ SN I+FV+K+PEL+
Sbjct: 584 SEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRKILEASNSIQFVIKRPELL 643
Query: 630 ISYL-PPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTN 688
+ P M S+ +L P +S P ++ ++
Sbjct: 644 TEGVKEPIMDSQGTASSLGFSPPALPPERDSGDPLVDESL-------------------- 683
Query: 689 GSNVPFKPRGREFSFEAWNAKI---TDLKQKVENLFNEKCGEALGLKQAVKVPFALFESF 745
K +G + +++A ++I L+++V++LFN+K GEALG+K V+VP+ +S
Sbjct: 684 ------KRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSN 737
Query: 746 PEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPP 805
P +EGLP G+PFR+P TFG LE+IL KIKF + +P
Sbjct: 738 PGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRP----------------- 780
Query: 806 RKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIG 865
Q IP D + +++ + LREQV +LF+ K+GEA+G
Sbjct: 781 ---------------------FQGLIPKPDEDDANRLGEKVILREQVKELFNEKYGEALG 819
Query: 866 MGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVI---R 922
+ PV VPY+ I +P V V G+P + F+ P+ +I + +IL + E ++ +I +
Sbjct: 820 LNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVIINQLQ 879
Query: 923 PFPGLVINNQLVDQSESEGP 942
PF + N+ V +S P
Sbjct: 880 PF-AEICNDAKVPAKDSSIP 898
Score = 260 bits (665), Expect = 4e-69
Identities = 201/620 (32%), Positives = 289/620 (46%), Gaps = 84/620 (13%)
Query: 108 EIETLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDL 167
+I TLR+ V+ F Y +ALG +VPVPY K+ D AV + G+P+ + FK P Y +
Sbjct: 347 DINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGV 406
Query: 168 ATLKWILENKAGISFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTED 227
LK ILE + I FIIKR F E + G D + L P P ED
Sbjct: 407 PKLKRILEERHSIHFIIKRMFDE--RIFTGNKFTKDTTK--LEPAS----------PPED 452
Query: 228 SGISLEMAAVTVKEESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDP 287
+ + A V + D + + + G G + E + T DP
Sbjct: 453 TSAEVSRATVLDLAGNARSDKGSMS-EDCGPGTSGELGGLRPIKIEPEDLDIIQVTVPDP 511
Query: 288 EVEVTIEDDDYSPPSKRPKANE------LPQPPVPEPANAGKRKVREFNFEKWNARITDL 341
T E+ S P P + L + E A +R V + + + I L
Sbjct: 512 SP--TSEEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDARPEERPVEDSHGDV----IRPL 565
Query: 342 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 401
RKQVE LF +YA+AI PV +PY F H E+L+V GLPEGI RRP+ +GI +L +
Sbjct: 566 RKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRK 625
Query: 402 ILLAKERIRFVIKKHELL-----------NSTREDLQLDKPA------------------ 432
IL A I+FVIK+ ELL T L PA
Sbjct: 626 ILEASNSIQFVIKRPELLTEGVKEPIMDSQGTASSLGFSPPALPPERDSGDPLVDESLKR 685
Query: 433 SGVKEEWYARITK------LRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEG 486
G +E + AR+++ LR+ V LF KK+ EALG VPY++ +++P + +EG
Sbjct: 686 QGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEG 745
Query: 487 LPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNV 546
LP IPFR P +G LE+I+ V ++IKF + RP Q P ++D N
Sbjct: 746 LPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRP----------FQGLIPKPDEDDANR 795
Query: 547 RITK--LRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWF 604
K LR+QV+E+FN K+ +ALGL V VPY + +P+ + V GLP+ IPFR+P +
Sbjct: 796 LGEKVILREQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTY 855
Query: 605 GIPRLERIVRGSNKIKFVVKKPELVISYLPPGMA----SKINTKALQSPKRPRSPGSNSK 660
I RLE+I++ ++ V +I+ L P +K+ K PKR R S
Sbjct: 856 DIHRLEKILKAREHVRMV------IINQLQPFAEICNDAKVPAKDSSIPKRKRKRVSEGN 909
Query: 661 VPEIEVTVEGPNNNNPQTSA 680
+ +++NP + A
Sbjct: 910 SVSSSSSSSSSSSSNPDSVA 929
Score = 143 bits (360), Expect = 9e-34
Identities = 118/426 (27%), Positives = 192/426 (45%), Gaps = 120/426 (28%)
Query: 443 ITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIP 502
I LRK V+ LF ++A+A+G +E VPY KF HP +L+V GLPE I R P+ +GI
Sbjct: 562 IRPLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIA 621
Query: 503 RLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTP----------------------- 539
+L KI++ N I+FVIKRPELLT E T
Sbjct: 622 KLRKILEASNSIQFVIKRPELLTEGVKEPIMDSQGTASSLGFSPPALPPERDSGDPLVDE 681
Query: 540 ------VKEDWNVRITK------LRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFL 587
+E+++ R+++ LR+QV+++FN K+ EA+ + Y
Sbjct: 682 SLKRQGFQENYDARLSRIDIANTLREQVQDLFNKKYG------EALGIKY---------- 725
Query: 588 YVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQ 647
P +P++ RI + +I LPPG+ +
Sbjct: 726 -----PVQVPYK-----------RIKSNPGSV---------IIEGLPPGIPFR------- 753
Query: 648 SPKRPRSPGSNSK------VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREF 701
+P + GS + +I+ TV P + P + + + + K
Sbjct: 754 ---KPCTFGSQNLERILAVADKIKFTV-----TRPFQGLIPKPDEDDANRLGEK------ 799
Query: 702 SFEAWNAKITDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFR 761
L+++V+ LFNEK GEALGL + V VP+ L P+ V GLP+ +PFR
Sbjct: 800 ---------VILREQVKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFR 850
Query: 762 RPSTFGIPRLEKILRNKAKIKF-IIKKPEMF-------ETAIKESTSSKSPPRKINSSPN 813
P+T+ I RLEKIL+ + ++ II + + F + K+S+ K ++++ +
Sbjct: 851 NPNTYDIHRLEKILKAREHVRMVIINQLQPFAEICNDAKVPAKDSSIPKRKRKRVSEGNS 910
Query: 814 VNTTAS 819
V++++S
Sbjct: 911 VSSSSS 916
Score = 102 bits (255), Expect = 1e-21
Identities = 109/410 (26%), Positives = 172/410 (41%), Gaps = 80/410 (19%)
Query: 551 LRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLE 610
LRK VEE+F++ +++ALG V +PY P L V+GLPEG+ FR P + L
Sbjct: 128 LRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALM 187
Query: 611 RIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEG 670
I+ S++I+F +K+P L ++N +L PK R G + + P++
Sbjct: 188 AILEHSHRIRFKLKRP-LEDGGRDSKALVELNGVSL-IPKGSRDCGLHGQAPKV------ 239
Query: 671 PNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALG 730
P + P PT T+ S F +S N I +LKQ+ + LG
Sbjct: 240 PPQDLP-------PTATSSSMASFL-----YSTALPNHAIRELKQEAPSC--PLAPSDLG 285
Query: 731 LKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIK-KPE 789
L + + P A + +DF ++P+ G P ++ + +K + I+ K E
Sbjct: 286 LSRPMPEPKA---TGAQDF------SDCCGQKPTGPGGPLIQNVHASKRILFSIVHDKSE 336
Query: 790 MFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLR 849
++ IKE+ ED+N LR
Sbjct: 337 KWDAFIKET-----------------------EDINT---------------------LR 352
Query: 850 EQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRI 909
E V LF+ ++ EA+G+ V VPYRKI +P V + G+P + FK P + ++RI
Sbjct: 353 ECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRI 412
Query: 910 LDSAEFIKFTVIRPFPGLVINNQLVDQS----ESEGPVIQESAEPSQLEV 955
L+ I F + R F + + E P SAE S+ V
Sbjct: 413 LEERHSIHFIIKRMFDERIFTGNKFTKDTTKLEPASPPEDTSAEVSRATV 462
>gi|15011924 GTF2I repeat domain containing 1 isoform 2 [Homo
sapiens]
Length = 944
Score = 377 bits (968), Expect = e-104
Identities = 302/979 (30%), Positives = 469/979 (47%), Gaps = 183/979 (18%)
Query: 22 VVTFLMSALESMCKELAKSKAEVACIAVYETDVFVVGTERGRAFVNTRKDFQKDFVKYCV 81
++T L+SAL+SMC L+K AEVAC+AV++ FVVGTE+GR F+N RK+ Q DF+++C
Sbjct: 30 IITSLVSALDSMCSALSKLNAEVACVAVHDESAFVVGTEKGRMFLNARKELQSDFLRFCR 89
Query: 82 EEEEKAAEMHKMKSTTQAN-------RMSVD-AVEIETLRKTVEDYFCFCYGKALGKSTV 133
K E K + R S++ ++ LRK VE+ F Y +ALG+++V
Sbjct: 90 GPPWKDPEAEHPKKVQRGEGGGRSLPRSSLEHGSDVYLLRKMVEEVFDVLYSEALGRASV 149
Query: 134 VPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKRPFLEPKK 193
VP+PYE++LR+ + VQGLPEG+AF+ P YD L ILE+ I F +KRP +
Sbjct: 150 VPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLKRPLED--- 206
Query: 194 HVGGR--VMVTDADRSILSPGGS--CG----PIKVKTEPTEDSGISLEMAAVTVKEESED 245
GGR + + + L P GS CG KV + + S MA+
Sbjct: 207 --GGRDSKALVELNGVSLIPKGSRDCGLHGQAPKVPPQDLPPTATSSSMAS--------- 255
Query: 246 PDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSE---TSEDPEVEVTIEDDDYSPPS 302
+ Y+ +H+ + E P S PS+ + PE + T D
Sbjct: 256 ---FLYSTALPNHAI---RELKQEAP---SCPLAPSDLGLSRPMPEPKATGAQDFSDCCG 306
Query: 303 KRPKANELPQPPVPEPANAGKR---KVREFNFEKWNARITD------LRKQVEELFERKY 353
++P P P+ + +A KR + EKW+A I + LR+ V+ LF +Y
Sbjct: 307 QKPTG---PGGPLIQNVHASKRILFSIVHDKSEKWDAFIKETEDINTLRECVQILFNSRY 363
Query: 354 AQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVI 413
A+A+ V +PY E + + G+P+ IPF+RP TYG+P+L+RIL + I F+I
Sbjct: 364 AEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIHFII 423
Query: 414 KK--HELL---NSTREDLQLDKPASGVKE--EWYARITKLRKMVDQLFCK-KFAEALG-S 464
K+ E + N +D +PAS ++ +R T L + K +E G
Sbjct: 424 KRMFDERIFTGNKFTKDTTKLEPASPPEDTSAEVSRATVLDLAGNARSDKGSMSEDCGPG 483
Query: 465 TEAKAVPYQKFEAHPNDLYV------------EGLPENIPFRSP---SWYGIPRLEKIIQ 509
T + + + P DL + E + +++P P S YG+
Sbjct: 484 TSGELGGLRPIKIEPEDLDIIQVTVPDPSPTSEEMTDSMPGHLPSEDSGYGM-------- 535
Query: 510 VGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITKLRKQVEEIFNLKFAQALGL 569
E+LT PV++ I LRKQVE +FN ++A+A+G+
Sbjct: 536 ------------EMLTDKGLSEDARPEERPVEDSHGDVIRPLRKQVELLFNTRYAKAIGI 583
Query: 570 TEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELV 629
+E VKVPY F +PE L+V GLPEGI R P FGI +L +I+ SN I+FV+K+PEL
Sbjct: 584 SEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRKILEASNSIQFVIKRPEL- 642
Query: 630 ISYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNG 689
+ + + S +R +S P ++ ++
Sbjct: 643 -------LTEGVKEPIVDSQER------DSGDPLVDESL--------------------- 668
Query: 690 SNVPFKPRGREFSFEAWNAKI---TDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFP 746
K +G + +++A ++I L+++V++LFN+K GEALG+K V+VP+ +S P
Sbjct: 669 -----KRQGFQENYDARLSRIDIANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNP 723
Query: 747 EDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPR 806
+EGLP G+PFR+P TFG LE+IL KIKF + +P
Sbjct: 724 GSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIKFTVTRP------------------ 765
Query: 807 KINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAIGM 866
Q IP D + +++ + LREQV +LF+ K+GEA+G+
Sbjct: 766 --------------------FQGLIPKPDEDDANRLGEKVILREQVKELFNEKYGEALGL 805
Query: 867 GFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVI---RP 923
PV VPY+ I +P V V G+P + F+ P+ +I + +IL + E ++ +I +P
Sbjct: 806 NRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVIINQLQP 865
Query: 924 FPGLVINNQLVDQSESEGP 942
F + N+ V +S P
Sbjct: 866 F-AEICNDAKVPAKDSSIP 883
Score = 263 bits (672), Expect = 6e-70
Identities = 198/605 (32%), Positives = 289/605 (47%), Gaps = 69/605 (11%)
Query: 108 EIETLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDL 167
+I TLR+ V+ F Y +ALG +VPVPY K+ D AV + G+P+ + FK P Y +
Sbjct: 347 DINTLRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGV 406
Query: 168 ATLKWILENKAGISFIIKRPFLEPKKHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTED 227
LK ILE + I FIIKR F E + G D + L P P ED
Sbjct: 407 PKLKRILEERHSIHFIIKRMFDE--RIFTGNKFTKDTTK--LEPAS----------PPED 452
Query: 228 SGISLEMAAVTVKEESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDP 287
+ + A V + D + + + G G + E + T DP
Sbjct: 453 TSAEVSRATVLDLAGNARSDKGSMS-EDCGPGTSGELGGLRPIKIEPEDLDIIQVTVPDP 511
Query: 288 EVEVTIEDDDYSPPSKRPKANE------LPQPPVPEPANAGKRKVREFNFEKWNARITDL 341
T E+ S P P + L + E A +R V + + + I L
Sbjct: 512 SP--TSEEMTDSMPGHLPSEDSGYGMEMLTDKGLSEDARPEERPVEDSHGDV----IRPL 565
Query: 342 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 401
RKQVE LF +YA+AI PV +PY F H E+L+V GLPEGI RRP+ +GI +L +
Sbjct: 566 RKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIAKLRK 625
Query: 402 ILLAKERIRFVIKKHELLNSTREDLQLDK--------------PASGVKEEWYARITK-- 445
IL A I+FVIK+ ELL ++ +D G +E + AR+++
Sbjct: 626 ILEASNSIQFVIKRPELLTEGVKEPIVDSQERDSGDPLVDESLKRQGFQENYDARLSRID 685
Query: 446 ----LRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGI 501
LR+ V LF KK+ EALG VPY++ +++P + +EGLP IPFR P +G
Sbjct: 686 IANTLREQVQDLFNKKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGS 745
Query: 502 PRLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDWNVRITK--LRKQVEEIF 559
LE+I+ V ++IKF + RP Q P ++D N K LR+QV+E+F
Sbjct: 746 QNLERILAVADKIKFTVTRP----------FQGLIPKPDEDDANRLGEKVILREQVKELF 795
Query: 560 NLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKI 619
N K+ +ALGL V VPY + +P+ + V GLP+ IPFR+P + I RLE+I++ +
Sbjct: 796 NEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILKAREHV 855
Query: 620 KFVVKKPELVISYLPPGMA----SKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNN 675
+ V +I+ L P +K+ K PKR R S + +++N
Sbjct: 856 RMV------IINQLQPFAEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSSSSSSSSSN 909
Query: 676 PQTSA 680
P + A
Sbjct: 910 PDSVA 914
Score = 149 bits (375), Expect = 2e-35
Identities = 118/411 (28%), Positives = 193/411 (46%), Gaps = 105/411 (25%)
Query: 443 ITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIP 502
I LRK V+ LF ++A+A+G +E VPY KF HP +L+V GLPE I R P+ +GI
Sbjct: 562 IRPLRKQVELLFNTRYAKAIGISEPVKVPYSKFLMHPEELFVVGLPEGISLRRPNCFGIA 621
Query: 503 RLEKIIQVGNRIKFVIKRPELLTHSTTE--------------VTQPRTNTPVKEDWNVRI 548
+L KI++ N I+FVIKRPELLT E V + +E+++ R+
Sbjct: 622 KLRKILEASNSIQFVIKRPELLTEGVKEPIVDSQERDSGDPLVDESLKRQGFQENYDARL 681
Query: 549 TK------LRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPT 602
++ LR+QV+++FN K+ EA+ + Y P +P++
Sbjct: 682 SRIDIANTLREQVQDLFNKKYG------EALGIKY---------------PVQVPYK--- 717
Query: 603 WFGIPRLERIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSK-- 660
RI + +I LPPG+ + +P + GS +
Sbjct: 718 --------RIKSNPGSV---------IIEGLPPGIPFR----------KPCTFGSQNLER 750
Query: 661 ----VPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQK 716
+I+ TV P + P + + + + K L+++
Sbjct: 751 ILAVADKIKFTV-----TRPFQGLIPKPDEDDANRLGEK---------------VILREQ 790
Query: 717 VENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILR 776
V+ LFNEK GEALGL + V VP+ L P+ V GLP+ +PFR P+T+ I RLEKIL+
Sbjct: 791 VKELFNEKYGEALGLNRPVLVPYKLIRDSPDAVEVTGLPDDIPFRNPNTYDIHRLEKILK 850
Query: 777 NKAKIKF-IIKKPEMF-------ETAIKESTSSKSPPRKINSSPNVNTTAS 819
+ ++ II + + F + K+S+ K ++++ +V++++S
Sbjct: 851 AREHVRMVIINQLQPFAEICNDAKVPAKDSSIPKRKRKRVSEGNSVSSSSS 901
Score = 102 bits (255), Expect = 1e-21
Identities = 109/410 (26%), Positives = 172/410 (41%), Gaps = 80/410 (19%)
Query: 551 LRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLE 610
LRK VEE+F++ +++ALG V +PY P L V+GLPEG+ FR P + L
Sbjct: 128 LRKMVEEVFDVLYSEALGRASVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALM 187
Query: 611 RIVRGSNKIKFVVKKPELVISYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEG 670
I+ S++I+F +K+P L ++N +L PK R G + + P++
Sbjct: 188 AILEHSHRIRFKLKRP-LEDGGRDSKALVELNGVSL-IPKGSRDCGLHGQAPKV------ 239
Query: 671 PNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFEAWNAKITDLKQKVENLFNEKCGEALG 730
P + P PT T+ S F +S N I +LKQ+ + LG
Sbjct: 240 PPQDLP-------PTATSSSMASFL-----YSTALPNHAIRELKQEAPSC--PLAPSDLG 285
Query: 731 LKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIK-KPE 789
L + + P A + +DF ++P+ G P ++ + +K + I+ K E
Sbjct: 286 LSRPMPEPKA---TGAQDF------SDCCGQKPTGPGGPLIQNVHASKRILFSIVHDKSE 336
Query: 790 MFETAIKESTSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLR 849
++ IKE+ ED+N LR
Sbjct: 337 KWDAFIKET-----------------------EDINT---------------------LR 352
Query: 850 EQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRI 909
E V LF+ ++ EA+G+ V VPYRKI +P V + G+P + FK P + ++RI
Sbjct: 353 ECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRI 412
Query: 910 LDSAEFIKFTVIRPFPGLVINNQLVDQS----ESEGPVIQESAEPSQLEV 955
L+ I F + R F + + E P SAE S+ V
Sbjct: 413 LEERHSIHFIIKRMFDERIFTGNKFTKDTTKLEPASPPEDTSAEVSRATV 462
>gi|239746033 PREDICTED: hypothetical protein XP_002344174 [Homo
sapiens]
Length = 145
Score = 159 bits (401), Expect = 2e-38
Identities = 98/187 (52%), Positives = 111/187 (59%), Gaps = 43/187 (22%)
Query: 1 MAQVAMSTLPVEDEESSESRMVVTFLMSALESM-CKELAKSKAEVACIAVYETDVFVVGT 59
MAQV +STL +EDE+S ESRMVVTFLMSALES C + K E C +Y V+ G
Sbjct: 1 MAQVLVSTLSIEDEDSYESRMVVTFLMSALESTDCFRVWILKQE--CTLIYHKKVYNPG- 57
Query: 60 ERGRAFVNTRKDFQKDFVKYCVEEEEKAAEMHKMKSTTQANRMSVDAVEIETLRKTVEDY 119
E + + N T +KTVEDY
Sbjct: 58 -----------------------------ESDECRCCRNGN----------TRKKTVEDY 78
Query: 120 FCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAG 179
FCFC KAL K T VPVPYEKML+DQSA++VQGLPEGVAFKHPENYDLATL+WILE AG
Sbjct: 79 FCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAG 138
Query: 180 ISFIIKR 186
ISFIIKR
Sbjct: 139 ISFIIKR 145
Score = 50.4 bits (119), Expect = 8e-06
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 447 RKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEK 506
+K V+ FC +AL VPY+K + L V+GLPE + F+ P Y + LE
Sbjct: 72 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 131
Query: 507 IIQVGNRIKFVIKR 520
I++ I F+IKR
Sbjct: 132 ILEYTAGISFIIKR 145
Score = 49.3 bits (116), Expect = 2e-05
Identities = 29/74 (39%), Positives = 38/74 (51%)
Query: 714 KQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEK 773
K+ VE+ F C +AL V VP+ V+GLPEGV F+ P + + LE
Sbjct: 72 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 131
Query: 774 ILRNKAKIKFIIKK 787
IL A I FIIK+
Sbjct: 132 ILEYTAGISFIIKR 145
Score = 47.0 bits (110), Expect = 9e-05
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 342 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 401
+K VE+ F +A++ V +PY L V+GLPEG+ F+ P Y + LE
Sbjct: 72 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 131
Query: 402 ILLAKERIRFVIKK 415
IL I F+IK+
Sbjct: 132 ILEYTAGISFIIKR 145
Score = 45.4 bits (106), Expect = 3e-04
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 552 RKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLER 611
+K VE+ F +AL V VPY + L V+GLPEG+ F+ P + + LE
Sbjct: 72 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 131
Query: 612 IVRGSNKIKFVVKK 625
I+ + I F++K+
Sbjct: 132 ILEYTAGISFIIKR 145
Score = 42.0 bits (97), Expect = 0.003
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 849 REQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRR 908
++ V D F +A+ V VPY K+ + ++V G+P GV+FK P +++++
Sbjct: 72 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 131
Query: 909 ILDSAEFIKFTVIR 922
IL+ I F + R
Sbjct: 132 ILEYTAGISFIIKR 145
>gi|239754606 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 298
Score = 131 bits (330), Expect = 3e-30
Identities = 74/213 (34%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 746 PEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKE-------- 797
PE+ +V GLPEG+ RRP+ FGI +L KIL I+F+IK+P++ +KE
Sbjct: 3 PEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQGT 62
Query: 798 -STSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLF 856
S+ SPP + P + + ++ + ++ + RL +++ A LREQV +LF
Sbjct: 63 ASSLGFSPP----ALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELF 118
Query: 857 SRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFI 916
++ +GEA+G+ +PV+VPY+ I NPG ++++ +PPG+ F+ P ++ RIL A I
Sbjct: 119 NKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKI 176
Query: 917 KFTVIRPFPGLVINNQLVDQSESEGPVIQESAE 949
FTV RPF GL+ D + ++QE +
Sbjct: 177 TFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVK 209
Score = 111 bits (278), Expect = 3e-24
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 37/184 (20%)
Query: 478 HPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTE------- 530
HP +L+V GLPE I R P+ +GI +L KI++ N I+FVIKRP+LLT E
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
Query: 531 ----------------------VTQPRTNTPVKEDWNVRITK------LRKQVEEIFNLK 562
V + +E+++ R+ + LR+QV+E+FN
Sbjct: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
Query: 563 FAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFV 622
+ +ALG+ V+VPY +SNP + +E LP GI FR P FG LERI+ +NKI F
Sbjct: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
Query: 623 VKKP 626
V +P
Sbjct: 180 VTRP 183
Score = 107 bits (268), Expect = 4e-23
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 48/235 (20%)
Query: 373 HVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELL-----------NS 421
H E+L+V GLPEGI RRP+ +GI +L +IL A I+FVIK+ +LL
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
Query: 422 TREDLQLDKPA------------------SGVKEEWYARITK------LRKMVDQLFCKK 457
T L PA G +E + AR+ + LR+ V +LF K
Sbjct: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
Query: 458 FAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFV 517
+ EALG VPY+ +++P + +E LP I FR P +G LE+I+ + N+I F
Sbjct: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
Query: 518 IKRPELLTHSTTEVTQPRTNTPVKEDWN-VRITKLRKQVEEIFNLKFAQALGLTE 571
+ RP Q P ++D N + L++QV+E+FN K++Q L L +
Sbjct: 180 VTRP----------FQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQ 224
Score = 101 bits (251), Expect = 4e-21
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 71/286 (24%)
Query: 583 NPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLP-PGMASKI 641
+PE L+V GLPEGI R P FGI +L +I+ SN I+FV+K+P+L+ + P + S+
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
Query: 642 NTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREF 701
+L P +S+ P + ++ K +G +
Sbjct: 62 TASSLGFSPPALPPERDSRDPLVGESL--------------------------KRQGFQE 95
Query: 702 SFEAWNAKI---TDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGV 758
+++A +I L+++V+ LFN+ GEALG+K V+VP+ +S P +E LP G+
Sbjct: 96 NYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGI 155
Query: 759 PFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTA 818
FR+P FG LE+IL KI F + +P F+ I++
Sbjct: 156 LFRKP--FGSQNLERILAMANKITFTVTRP--FQGLIRKP-------------------- 191
Query: 819 SGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAI 864
+DD RL +V L+EQV +LF+ K+ + +
Sbjct: 192 -------------DEDDTNRLGEV----ILQEQVKELFNEKYSQCL 220
Score = 65.1 bits (157), Expect = 3e-10
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 298 YSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARI---TDLRKQVEELFERKYA 354
+SPP+ P+ + P + KR+ + N++ RI LR+QV+ELF + Y
Sbjct: 68 FSPPALPPERDSRD----PLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKTYG 123
Query: 355 QAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIK 414
+A+ K PV +PY +S+ + +E LP GI FR+P +G LERIL +I F +
Sbjct: 124 EALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFTVT 181
Query: 415 K--HELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEAL 462
+ L+ ED D G L++ V +LF +K+++ L
Sbjct: 182 RPFQGLIRKPDED---DTNRLGE--------VILQEQVKELFNEKYSQCL 220
Score = 49.3 bits (116), Expect = 2e-05
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
TLR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L
Sbjct: 109 TLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNL 166
Query: 171 KWILENKAGISFIIKRPF 188
+ IL I+F + RPF
Sbjct: 167 ERILAMANKITFTVTRPF 184
Score = 38.9 bits (89), Expect = 0.024
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 150 VQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKRPFL 189
V GLPEG++ + P + +A L ILE I F+IKRP L
Sbjct: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKL 47
Score = 33.5 bits (75), Expect = 1.00
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 879 INPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRP 923
++P + V G+P G+S + P+ I+ + +IL+++ I+F + RP
Sbjct: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
>gi|239749152 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 265
Score = 131 bits (330), Expect = 3e-30
Identities = 74/213 (34%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 746 PEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKE-------- 797
PE+ +V GLPEG+ RRP+ FGI +L KIL I+F+IK+P++ +KE
Sbjct: 3 PEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQGT 62
Query: 798 -STSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLF 856
S+ SPP + P + + ++ + ++ + RL +++ A LREQV +LF
Sbjct: 63 ASSLGFSPP----ALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELF 118
Query: 857 SRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFI 916
++ +GEA+G+ +PV+VPY+ I NPG ++++ +PPG+ F+ P ++ RIL A I
Sbjct: 119 NKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKI 176
Query: 917 KFTVIRPFPGLVINNQLVDQSESEGPVIQESAE 949
FTV RPF GL+ D + ++QE +
Sbjct: 177 TFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVK 209
Score = 111 bits (278), Expect = 3e-24
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 37/184 (20%)
Query: 478 HPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTE------- 530
HP +L+V GLPE I R P+ +GI +L KI++ N I+FVIKRP+LLT E
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
Query: 531 ----------------------VTQPRTNTPVKEDWNVRITK------LRKQVEEIFNLK 562
V + +E+++ R+ + LR+QV+E+FN
Sbjct: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
Query: 563 FAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFV 622
+ +ALG+ V+VPY +SNP + +E LP GI FR P FG LERI+ +NKI F
Sbjct: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
Query: 623 VKKP 626
V +P
Sbjct: 180 VTRP 183
Score = 107 bits (268), Expect = 4e-23
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 48/235 (20%)
Query: 373 HVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELL-----------NS 421
H E+L+V GLPEGI RRP+ +GI +L +IL A I+FVIK+ +LL
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
Query: 422 TREDLQLDKPA------------------SGVKEEWYARITK------LRKMVDQLFCKK 457
T L PA G +E + AR+ + LR+ V +LF K
Sbjct: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
Query: 458 FAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFV 517
+ EALG VPY+ +++P + +E LP I FR P +G LE+I+ + N+I F
Sbjct: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
Query: 518 IKRPELLTHSTTEVTQPRTNTPVKEDWN-VRITKLRKQVEEIFNLKFAQALGLTE 571
+ RP Q P ++D N + L++QV+E+FN K++Q L L +
Sbjct: 180 VTRP----------FQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQ 224
Score = 101 bits (251), Expect = 4e-21
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 71/286 (24%)
Query: 583 NPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLP-PGMASKI 641
+PE L+V GLPEGI R P FGI +L +I+ SN I+FV+K+P+L+ + P + S+
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
Query: 642 NTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREF 701
+L P +S+ P + ++ K +G +
Sbjct: 62 TASSLGFSPPALPPERDSRDPLVGESL--------------------------KRQGFQE 95
Query: 702 SFEAWNAKI---TDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGV 758
+++A +I L+++V+ LFN+ GEALG+K V+VP+ +S P +E LP G+
Sbjct: 96 NYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGI 155
Query: 759 PFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTA 818
FR+P FG LE+IL KI F + +P F+ I++
Sbjct: 156 LFRKP--FGSQNLERILAMANKITFTVTRP--FQGLIRKP-------------------- 191
Query: 819 SGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAI 864
+DD RL +V L+EQV +LF+ K+ + +
Sbjct: 192 -------------DEDDTNRLGEV----ILQEQVKELFNEKYSQCL 220
Score = 65.1 bits (157), Expect = 3e-10
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 298 YSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARI---TDLRKQVEELFERKYA 354
+SPP+ P+ + P + KR+ + N++ RI LR+QV+ELF + Y
Sbjct: 68 FSPPALPPERDSRD----PLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKTYG 123
Query: 355 QAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIK 414
+A+ K PV +PY +S+ + +E LP GI FR+P +G LERIL +I F +
Sbjct: 124 EALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFTVT 181
Query: 415 K--HELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEAL 462
+ L+ ED D G L++ V +LF +K+++ L
Sbjct: 182 RPFQGLIRKPDED---DTNRLGE--------VILQEQVKELFNEKYSQCL 220
Score = 49.3 bits (116), Expect = 2e-05
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
TLR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L
Sbjct: 109 TLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNL 166
Query: 171 KWILENKAGISFIIKRPF 188
+ IL I+F + RPF
Sbjct: 167 ERILAMANKITFTVTRPF 184
Score = 38.9 bits (89), Expect = 0.024
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 150 VQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKRPFL 189
V GLPEG++ + P + +A L ILE I F+IKRP L
Sbjct: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKL 47
Score = 33.5 bits (75), Expect = 1.00
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 879 INPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRP 923
++P + V G+P G+S + P+ I+ + +IL+++ I+F + RP
Sbjct: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
>gi|239508897 PREDICTED: similar to hCG1983816 [Homo sapiens]
Length = 265
Score = 131 bits (330), Expect = 3e-30
Identities = 74/213 (34%), Positives = 121/213 (56%), Gaps = 15/213 (7%)
Query: 746 PEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKE-------- 797
PE+ +V GLPEG+ RRP+ FGI +L KIL I+F+IK+P++ +KE
Sbjct: 3 PEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQGT 62
Query: 798 -STSSKSPPRKINSSPNVNTTASGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLF 856
S+ SPP + P + + ++ + ++ + RL +++ A LREQV +LF
Sbjct: 63 ASSLGFSPP----ALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELF 118
Query: 857 SRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFI 916
++ +GEA+G+ +PV+VPY+ I NPG ++++ +PPG+ F+ P ++ RIL A I
Sbjct: 119 NKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKI 176
Query: 917 KFTVIRPFPGLVINNQLVDQSESEGPVIQESAE 949
FTV RPF GL+ D + ++QE +
Sbjct: 177 TFTVTRPFQGLIRKPDEDDTNRLGEVILQEQVK 209
Score = 111 bits (278), Expect = 3e-24
Identities = 68/184 (36%), Positives = 97/184 (52%), Gaps = 37/184 (20%)
Query: 478 HPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKRPELLTHSTTE------- 530
HP +L+V GLPE I R P+ +GI +L KI++ N I+FVIKRP+LLT E
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
Query: 531 ----------------------VTQPRTNTPVKEDWNVRITK------LRKQVEEIFNLK 562
V + +E+++ R+ + LR+QV+E+FN
Sbjct: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
Query: 563 FAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFV 622
+ +ALG+ V+VPY +SNP + +E LP GI FR P FG LERI+ +NKI F
Sbjct: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
Query: 623 VKKP 626
V +P
Sbjct: 180 VTRP 183
Score = 107 bits (268), Expect = 4e-23
Identities = 78/235 (33%), Positives = 116/235 (49%), Gaps = 48/235 (20%)
Query: 373 HVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELL-----------NS 421
H E+L+V GLPEGI RRP+ +GI +L +IL A I+FVIK+ +LL
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
Query: 422 TREDLQLDKPA------------------SGVKEEWYARITK------LRKMVDQLFCKK 457
T L PA G +E + AR+ + LR+ V +LF K
Sbjct: 62 TASSLGFSPPALPPERDSRDPLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKT 121
Query: 458 FAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFV 517
+ EALG VPY+ +++P + +E LP I FR P +G LE+I+ + N+I F
Sbjct: 122 YGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFT 179
Query: 518 IKRPELLTHSTTEVTQPRTNTPVKEDWN-VRITKLRKQVEEIFNLKFAQALGLTE 571
+ RP Q P ++D N + L++QV+E+FN K++Q L L +
Sbjct: 180 VTRP----------FQGLIRKPDEDDTNRLGEVILQEQVKELFNEKYSQCLWLLQ 224
Score = 101 bits (251), Expect = 4e-21
Identities = 82/286 (28%), Positives = 133/286 (46%), Gaps = 71/286 (24%)
Query: 583 NPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKKPELVISYLP-PGMASKI 641
+PE L+V GLPEGI R P FGI +L +I+ SN I+FV+K+P+L+ + P + S+
Sbjct: 2 HPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKLLTEGVKEPIVDSQG 61
Query: 642 NTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREF 701
+L P +S+ P + ++ K +G +
Sbjct: 62 TASSLGFSPPALPPERDSRDPLVGESL--------------------------KRQGFQE 95
Query: 702 SFEAWNAKI---TDLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGV 758
+++A +I L+++V+ LFN+ GEALG+K V+VP+ +S P +E LP G+
Sbjct: 96 NYDARLLRIDIANTLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGI 155
Query: 759 PFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSSPNVNTTA 818
FR+P FG LE+IL KI F + +P F+ I++
Sbjct: 156 LFRKP--FGSQNLERILAMANKITFTVTRP--FQGLIRKP-------------------- 191
Query: 819 SGVEDLNIIQVTIPDDDNERLSKVEKARQLREQVNDLFSRKFGEAI 864
+DD RL +V L+EQV +LF+ K+ + +
Sbjct: 192 -------------DEDDTNRLGEV----ILQEQVKELFNEKYSQCL 220
Score = 65.1 bits (157), Expect = 3e-10
Identities = 52/170 (30%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 298 YSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNARI---TDLRKQVEELFERKYA 354
+SPP+ P+ + P + KR+ + N++ RI LR+QV+ELF + Y
Sbjct: 68 FSPPALPPERDSRD----PLVGESLKRQGFQENYDARLLRIDIANTLREQVQELFNKTYG 123
Query: 355 QAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIK 414
+A+ K PV +PY +S+ + +E LP GI FR+P +G LERIL +I F +
Sbjct: 124 EALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNLERILAMANKITFTVT 181
Query: 415 K--HELLNSTREDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEAL 462
+ L+ ED D G L++ V +LF +K+++ L
Sbjct: 182 RPFQGLIRKPDED---DTNRLGE--------VILQEQVKELFNEKYSQCL 220
Score = 49.3 bits (116), Expect = 2e-05
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
TLR+ V++ F YG+ALG V VPY+ + + +++++ LP G+ F+ P + L
Sbjct: 109 TLREQVQELFNKTYGEALGIKYPVQVPYKWIKSNPGSMIIEELPPGILFRKP--FGSQNL 166
Query: 171 KWILENKAGISFIIKRPF 188
+ IL I+F + RPF
Sbjct: 167 ERILAMANKITFTVTRPF 184
Score = 38.9 bits (89), Expect = 0.024
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 150 VQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKRPFL 189
V GLPEG++ + P + +A L ILE I F+IKRP L
Sbjct: 8 VVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRPKL 47
Score = 33.5 bits (75), Expect = 1.00
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 879 INPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIRP 923
++P + V G+P G+S + P+ I+ + +IL+++ I+F + RP
Sbjct: 1 MHPEELFVVGLPEGISLRRPNCFGIAKLWKILEASNSIQFVIKRP 45
>gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo
sapiens]
Length = 304
Score = 129 bits (324), Expect = 1e-29
Identities = 62/75 (82%), Positives = 67/75 (89%)
Query: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
T +KTVEDYFCFC KAL K T VPVPYEKML+DQSA++VQGLPEGVAFKHPENYDLATL
Sbjct: 19 TRKKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATL 78
Query: 171 KWILENKAGISFIIK 185
+WILE AGISFIIK
Sbjct: 79 EWILEYTAGISFIIK 93
Score = 50.1 bits (118), Expect = 1e-05
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 714 KQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEK 773
K+ VE+ F C +AL V VP+ V+GLPEGV F+ P + + LE
Sbjct: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 774 ILRNKAKIKFIIKKPEMFETAIKESTSSKSPPRKINSS 811
IL A I FIIK ++PP ++N +
Sbjct: 81 ILEYTAGISFIIKS--------SGEPQGRTPPLRLNQA 110
Score = 48.5 bits (114), Expect = 3e-05
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 447 RKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEK 506
+K V+ FC +AL VPY+K + L V+GLPE + F+ P Y + LE
Sbjct: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 507 IIQVGNRIKFVIK 519
I++ I F+IK
Sbjct: 81 ILEYTAGISFIIK 93
Score = 46.2 bits (108), Expect = 1e-04
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 342 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 401
+K VE+ F +A++ V +PY L V+GLPEG+ F+ P Y + LE
Sbjct: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 402 ILLAKERIRFVIK 414
IL I F+IK
Sbjct: 81 ILEYTAGISFIIK 93
Score = 44.7 bits (104), Expect = 4e-04
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 552 RKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLER 611
+K VE+ F +AL V VPY + L V+GLPEG+ F+ P + + LE
Sbjct: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 612 IVRGSNKIKFVVK 624
I+ + I F++K
Sbjct: 81 ILEYTAGISFIIK 93
Score = 41.2 bits (95), Expect = 0.005
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 849 REQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRR 908
++ V D F +A+ V VPY K+ + ++V G+P GV+FK P +++++
Sbjct: 21 KKTVEDYFCFCCRKALQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 909 ILDSAEFIKFTV 920
IL+ I F +
Sbjct: 81 ILEYTAGISFII 92
>gi|239752592 PREDICTED: hypothetical protein XP_002348308, partial
[Homo sapiens]
Length = 94
Score = 129 bits (323), Expect = 2e-29
Identities = 62/76 (81%), Positives = 67/76 (88%)
Query: 111 TLRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATL 170
T +KTVEDYFCFC K L K T VPVPYEKML+DQSA++VQGLPEGVAFKHPENYDLATL
Sbjct: 19 TRKKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATL 78
Query: 171 KWILENKAGISFIIKR 186
+WILE AGISFIIKR
Sbjct: 79 EWILEYTAGISFIIKR 94
Score = 48.9 bits (115), Expect = 2e-05
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 447 RKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEK 506
+K V+ FC + L VPY+K + L V+GLPE + F+ P Y + LE
Sbjct: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 507 IIQVGNRIKFVIKR 520
I++ I F+IKR
Sbjct: 81 ILEYTAGISFIIKR 94
Score = 47.0 bits (110), Expect = 9e-05
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 714 KQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEK 773
K+ VE+ F C + L V VP+ V+GLPEGV F+ P + + LE
Sbjct: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 774 ILRNKAKIKFIIKK 787
IL A I FIIK+
Sbjct: 81 ILEYTAGISFIIKR 94
Score = 45.4 bits (106), Expect = 3e-04
Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 342 RKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLER 401
+K VE+ F + ++ V +PY L V+GLPEG+ F+ P Y + LE
Sbjct: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 402 ILLAKERIRFVIKK 415
IL I F+IK+
Sbjct: 81 ILEYTAGISFIIKR 94
Score = 43.9 bits (102), Expect = 7e-04
Identities = 24/74 (32%), Positives = 38/74 (51%)
Query: 552 RKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLER 611
+K VE+ F + L V VPY + L V+GLPEG+ F+ P + + LE
Sbjct: 21 KKTVEDYFCFCCLKTLQKPTEVPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEW 80
Query: 612 IVRGSNKIKFVVKK 625
I+ + I F++K+
Sbjct: 81 ILEYTAGISFIIKR 94
Score = 40.0 bits (92), Expect = 0.011
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 870 VKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIR 922
V VPY K+ + ++V G+P GV+FK P +++++ IL+ I F + R
Sbjct: 42 VPVPYEKMLQDQSALIVQGLPEGVAFKHPENYDLATLEWILEYTAGISFIIKR 94
>gi|239740995 PREDICTED: hypothetical protein XP_002342058 [Homo
sapiens]
Length = 361
Score = 113 bits (283), Expect = 8e-25
Identities = 76/187 (40%), Positives = 94/187 (50%), Gaps = 40/187 (21%)
Query: 303 KRPKANELPQPPVPEPANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGP 362
++ K NE PQPPVPEPANAG+RK+REFN EKWN RI DLRKQ EEL ERKY + K
Sbjct: 214 RKTKTNEPPQPPVPEPANAGERKMREFNSEKWNHRIADLRKQTEELSERKYGMSKLEKSC 273
Query: 363 VTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNST 422
+ ++ VE L++ G+P P G+P IL HEL+NST
Sbjct: 274 NLMFMGVYT--VELLFIMGVPWTSP-------GLPASHAILTC-------FSLHELMNST 317
Query: 423 REDLQLDKPASGVKEEWYARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDL 482
EDLQLDK AR K + V +PY F++H D
Sbjct: 318 GEDLQLDKSTLS------ARAVKAKGPV------------------MIPYPFFQSHVEDF 353
Query: 483 YVEGLPE 489
Y E LP+
Sbjct: 354 YAEALPK 360
Score = 31.6 bits (70), Expect = 3.8
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 699 REFSFEAWNAKITDLKQKVENLFNEKCG 726
REF+ E WN +I DL+++ E L K G
Sbjct: 238 REFNSEKWNHRIADLRKQTEELSERKYG 265
Score = 31.2 bits (69), Expect = 5.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 728 ALGLKQAVKVPFALFESFPEDFYVEGLPE 756
A+ K V +P+ F+S EDFY E LP+
Sbjct: 332 AVKAKGPVMIPYPFFQSHVEDFYAEALPK 360
>gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo
sapiens]
Length = 561
Score = 45.8 bits (107), Expect = 2e-04
Identities = 29/41 (70%), Positives = 32/41 (78%), Gaps = 7/41 (17%)
Query: 1 MAQVAMSTLP------VEDEESSESRMVVTFLMSALESMCK 35
MAQVA+STLP VEDEES ESRMVVTFL SAL+SM +
Sbjct: 1 MAQVAVSTLPIEDEESVEDEESLESRMVVTFL-SALDSMVR 40
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 43.9 bits (102), Expect = 7e-04
Identities = 133/606 (21%), Positives = 221/606 (36%), Gaps = 124/606 (20%)
Query: 267 EMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSPPSKRPKANELPQPPVPEPANAGKRKV 326
E E+P E+ + VP E PE E + +++ P K P+ PVP P K+KV
Sbjct: 10144 EEEIPPEE--EEVPPEEEYVPEEEEFVPEEEVLPEVK-------PKVPVPAPVPEIKKKV 10194
Query: 327 REFNF------EKWNARITDLRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVE 380
E E A++ ++ K+VEE + I K +P + + E+ E
Sbjct: 10195 TEKKVVIPKKEEAPPAKVPEVPKKVEE------KRIILPKEEEVLPVEVTEEPEEEPISE 10248
Query: 381 GLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWY 440
E IP PS I +E + A R+ VIKK T +++ P + V
Sbjct: 10249 ---EEIPEEPPS---IEEVEEV--APPRVPEVIKKAVPEAPTPVPKKVEAPPAKVS---- 10296
Query: 441 ARITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRS----- 495
KK E E VP QK EA P V +P+ +P +
Sbjct: 10297 ---------------KKIPE-----EKVPVPVQKKEAPP--AKVPEVPKKVPEKKVLVPK 10334
Query: 496 ----PSWYGIPRLEKIIQVGNRIKFVIKRP---ELLTHSTTEVTQPRTNTPVKEDWN--- 545
P G LE+ + V R + V+K E++ E+ + V+E +
Sbjct: 10335 KEAVPPAKGRTVLEEKVSVAFRQEVVVKERLELEVVEAEVEEIPEEEEFHEVEEYFEEGE 10394
Query: 546 -------VRITKLR-------KQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEG 591
+++ + R ++V + + A+ + + E K P E + + + +
Sbjct: 10395 FHEVEEFIKLEQHRVEEEHRVEKVHRVIEVFEAEEVEVFEKPKAPPKGPEISEKIIPPKK 10454
Query: 592 LPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVK---KPELVISYLPPGMASKINTKALQS 648
P + R +P + + + K++ + P V LPP +
Sbjct: 10455 PPTKVVPRKEPPAKVPEVPKKIVVEEKVRVPEEPRVPPTKVPEVLPPKEVVPEKKVPVPP 10514
Query: 649 PKRPRSP------GSNSKVPEIEVTV------EGPNNNNPQTSAVRTPTQTNGSNVPFKP 696
K+P +P VPE +V V E P P+ P + +P KP
Sbjct: 10515 AKKPEAPPPKVPEAPKEVVPEKKVPVPPPKKPEVPPTKVPEVPKAAVPEKKVPEAIPPKP 10574
Query: 697 RGREFSFEAWNAKITDLKQKVENLFNEKCGEALGLKQ----AVKVPFALFESFPEDFYVE 752
+ ++ + + + EK A K+ VKVP A E PE V
Sbjct: 10575 ----------ESPPPEVPEAPKEVVPEKKVPAAPPKKPEVTPVKVPEAPKEVVPEK-KVP 10623
Query: 753 GLPEGVPFRRPSTFGIPRLEKILRNKAKIKFII------KKPEMFETAIKESTSSKSPPR 806
P P P+ +P + K+ + K+ I PE+FE E + + PP
Sbjct: 10624 VPPPKKPEVPPTK--VPEVPKVAVPEKKVPEAIPPKPESPPPEVFEE--PEEVALEEPPA 10679
Query: 807 KINSSP 812
++ P
Sbjct: 10680 EVVEEP 10685
Score = 37.0 bits (84), Expect = 0.090
Identities = 91/425 (21%), Positives = 161/425 (37%), Gaps = 95/425 (22%)
Query: 269 EVPAEDSTQHVPSETSEDPEVEVTIEDDDYSPPSKRPKANELPQPPVPE---PANAGKRK 325
E P VP + + +V V + +PP+K P E+P+ PVPE P A K+
Sbjct: 9997 EKPPPAKVPEVPKKPVPEEKVPVPVPKKVEAPPAKVP---EVPKKPVPEKKVPVPAPKK- 10052
Query: 326 VREFNFEKWNARITDLRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEG 385
E A++ ++ K++ + K P +P VE P
Sbjct: 10053 -----VEAPPAKVPEVPKKL----------IPEEKKPTPVPKK----------VEAPPPK 10087
Query: 386 IPFRR---PSTYGIPRLERILLAKERIRFVIKKHELLNSTREDLQLDKPASGVKEEWYAR 442
+P +R P +P+ E +L +E ++ + E+L E L ++ +EE
Sbjct: 10088 VPKKREPVPVPVALPQEEEVLFEEE----IVPEEEVLPEEEEVLPEEEEVLPEEEEVL-- 10141
Query: 443 ITKLRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIP 502
E + +P ++ E P + YV PE F +P
Sbjct: 10142 ----------------------PEEEEIPPEEEEVPPEEEYV---PEEEEF-------VP 10169
Query: 503 RLEKIIQVGNRIKFVIKRPELLTHSTTEVTQPRTNTPVKEDW-NVRITKLRKQVEEIFNL 561
E + +V ++ PE+ +VT+ + P KE+ ++ ++ K+VEE
Sbjct: 10170 EEEVLPEVKPKVPVPAPVPEI----KKKVTEKKVVIPKKEEAPPAKVPEVPKKVEE---- 10221
Query: 562 KFAQALGLTEAVKVPYPVFES-NPEFLYVEGLPEGIP-FRSPTWFGIPRLERIVRGSNKI 619
+ + E +P V E E + E +PE P PR+ +++
Sbjct: 10222 --KRIILPKEEEVLPVEVTEEPEEEPISEEEIPEEPPSIEEVEEVAPPRVPEVIK----- 10274
Query: 620 KFVVKKPELV---ISYLPPGMASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNP 676
K V + P V + P ++ KI + + P + + +KVPE+ V P
Sbjct: 10275 KAVPEAPTPVPKKVEAPPAKVSKKIPEEKVPVPVQ-KKEAPPAKVPEVPKKVPEKKVLVP 10333
Query: 677 QTSAV 681
+ AV
Sbjct: 10334 KKEAV 10338
Score = 36.6 bits (83), Expect = 0.12
Identities = 56/221 (25%), Positives = 84/221 (38%), Gaps = 36/221 (16%)
Query: 134 VPVPYEKMLRDQSA-VVVQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKRPFLEPK 192
V VP +K + ++ A VV PE K PE K ++ K K P + PK
Sbjct: 10693 VTVPPKKPVPEKKAPAVVAKKPELPPVKVPE-----VPKEVVPEK-------KVPLVVPK 10740
Query: 193 KHVGGRVMVTDADRSILSPGGSCGPIKVKTEPTE-----DSGISLEMAAVTVKEESEDPD 247
K V + + ++ P K + P + + E AV V E +E P
Sbjct: 10741 KPEAPPAKVPEVPKEVVPEKKVAVPKKPEVPPAKVPEVPKKPVLEEKPAVPVPERAESPP 10800
Query: 248 YYQYNIQGSHHSSEGNEGTEMEVP---AEDSTQHVPSETSED------PEVEVTIEDDDY 298
Y + + E E E P AE+ VP + PE +V +
Sbjct: 10801 PEVYE-EPEEIAPEEEIAPEEEKPVPVAEEEEPEVPPPAVPEEPKKIIPEKKVPVIKKPE 10859
Query: 299 SPPSKRPKANEL-------PQPPVPEPANAGKRKVREFNFE 332
+PP K P+ ++ P+PP P PA K V+E F+
Sbjct: 10860 APPPKEPEPEKVIEKPKLKPRPPPPPPA-PPKEDVKEKIFQ 10899
Score = 33.1 bits (74), Expect = 1.3
Identities = 59/240 (24%), Positives = 91/240 (37%), Gaps = 31/240 (12%)
Query: 135 PVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKRPFLEPKKH 194
PVP EK+ +P VA K P + K ++E K ++ K F P++
Sbjct: 9434 PVPEEKV----------AVPVPVAKKAPPPRAEVSKKTVVEEKRFVAEE-KLSFAVPQRV 9482
Query: 195 VGGRVMVTDADRSILSPGGSCGPIKVKTEPTEDSGISLEMAAVTVKEESEDPDYY----Q 250
R V+ + S I V E + E A VT E E+P+ Y +
Sbjct: 9483 EVTRHEVSAEEEWSYSEEEEGVSISVYREEEREEE---EEAEVTEYEVMEEPEEYVVEEK 9539
Query: 251 YNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSP----PSKRPK 306
+I +E E TE + +P++ E P +V P P+ PK
Sbjct: 9540 LHIISKRVEAEPAEVTERQEKKIVLKPKIPAKIEEPPPAKVPEAPKKIVPEKKVPAPVPK 9599
Query: 307 ANELPQPPVPE------PANAGKRKVREFNFEKWNARITDLRKQVEELFERKYAQAIKAK 360
++P P VPE P KV + E A++T+ Q+ + E K A+ K
Sbjct: 9600 KEKVPPPKVPEEPKKPVPEKKVPPKVIKME-EPLPAKVTERHMQITQ--EEKVLVAVTKK 9656
Score = 32.3 bits (72), Expect = 2.2
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 19/131 (14%)
Query: 200 MVTDADRSILSPGGSCGPIKVKTEPTE-DSGISLEMAAVTVK--EESEDPDYYQYNIQGS 256
+V + SI +P PIK T E + +LE AV+V+ EE E+ + Y Y
Sbjct: 9699 VVKEEKVSIEAPKREPQPIKEVTIMEEKERAYTLEEEAVSVQREEEYEEYEEYDY----- 9753
Query: 257 HHSSEGNEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDY-SPPSKRPKANELPQPPV 315
E E E P E+ Q+ E E+ E E E ++Y + P K +P+ PV
Sbjct: 9754 ------KEFEEYE-PTEEYDQY---EEYEEREYERYEEHEEYITEPEKPIPVKPVPEEPV 9803
Query: 316 PEPANAGKRKV 326
P A KV
Sbjct: 9804 PTKPKAPPAKV 9814
>gi|146232000 checkpoint suppressor 1 isoform 1 [Homo sapiens]
Length = 490
Score = 36.2 bits (82), Expect = 0.15
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 29/124 (23%)
Query: 214 SCGPIKVKTEPTEDSGISLEMAA-----------VTVKEESEDPDYYQYNIQGSHHSSEG 262
SCG V +P ED S ++ ++ S D D+Y++ +GS SEG
Sbjct: 321 SCGSPVVSGDPKEDHNYSSAKSSNARSTSPTSDSISSSSSSAD-DHYEFATKGSQEGSEG 379
Query: 263 NEGTEMEVPAEDSTQHVPSETSED------PEVEVTIEDDDYSPPSKR----PKANELPQ 312
+EG+ + PS+T ED E + ++ D Y+ K+ KA ++P
Sbjct: 380 SEGS-------FRSHESPSDTEEDDRKHSQKEPKDSLGDSGYASQHKKRQHFAKARKVPS 432
Query: 313 PPVP 316
+P
Sbjct: 433 DTLP 436
>gi|51093865 checkpoint suppressor 1 isoform 2 [Homo sapiens]
Length = 468
Score = 36.2 bits (82), Expect = 0.15
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 29/124 (23%)
Query: 214 SCGPIKVKTEPTEDSGISLEMAA-----------VTVKEESEDPDYYQYNIQGSHHSSEG 262
SCG V +P ED S ++ ++ S D D+Y++ +GS SEG
Sbjct: 299 SCGSPVVSGDPKEDHNYSSAKSSNARSTSPTSDSISSSSSSAD-DHYEFATKGSQEGSEG 357
Query: 263 NEGTEMEVPAEDSTQHVPSETSED------PEVEVTIEDDDYSPPSKR----PKANELPQ 312
+EG+ + PS+T ED E + ++ D Y+ K+ KA ++P
Sbjct: 358 SEGS-------FRSHESPSDTEEDDRKHSQKEPKDSLGDSGYASQHKKRQHFAKARKVPS 410
Query: 313 PPVP 316
+P
Sbjct: 411 DTLP 414
>gi|28872812 MORC family CW-type zinc finger 3 [Homo sapiens]
Length = 939
Score = 36.2 bits (82), Expect = 0.15
Identities = 24/105 (22%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 607 PRLERIVRGSNKIKFVVKKPELV------ISYLPPGMASKINTKALQS-PKRPRSPGSNS 659
P E+ + +NK KF +++PE++ + + P +++ + +S P+R S G+NS
Sbjct: 460 PTYEKTYKKTNKEKFRIRQPEMIPRINAELLFRPTALSTPSFSSPKESVPRRHLSEGTNS 519
Query: 660 KVPEIEVTVEGPNNNNPQTSAVRTPTQTNGSNVPFKPRGREFSFE 704
+ + P + P++++++ T S + K R FE
Sbjct: 520 YATRLLNNHQVPPQSEPESNSLKRRLSTRSSILNAKNRRLSSQFE 564
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 36.2 bits (82), Expect = 0.15
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 9/65 (13%)
Query: 252 NIQGSHHSSEGNEGTEMEVPAEDSTQHVPSETS--EDPEVEVTIEDDDYSPPSKRPKANE 309
N + SHH+SEG + + +DS+ H SE+S D E E + D + + PS+ A+
Sbjct: 410 NSEPSHHNSEGADNSR-----DDSSSHSGSESSSGSDSESESSSSDSEANEPSQ--SASP 462
Query: 310 LPQPP 314
P+PP
Sbjct: 463 EPEPP 467
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 35.8 bits (81), Expect = 0.20
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 246 PDYYQ-YNIQGSHHSSEGNEGTEMEVP----AEDSTQHVP-SETSEDPEVEVTIEDDDYS 299
P YY+ +N H S T E P AE++ + P S TS P D DY
Sbjct: 367 PAYYESWNRYQRHTSYPPRRATREEPPGAPFAENTAERFPPSYTSYLPPEPSRPTDQDYR 426
Query: 300 PPSKRPKANELPQPPVPEPANAG 322
PP A+E P P PEP G
Sbjct: 427 PP-----ASEAPPPEPPEPGGGG 444
Score = 30.4 bits (67), Expect = 8.5
Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 8/71 (11%)
Query: 252 NIQGSHHSSEGNEGTEMEVP-AEDSTQHVPSETSEDPEVEVTIEDDDYS---PPSKRPKA 307
N + + G G E P A Q P + +D E I DDD PP+ P
Sbjct: 547 NFEDVAPTGSGEPGATRESPKANGQNQASPCSSGDDME----ISDDDRGGSPPPAPTPPQ 602
Query: 308 NELPQPPVPEP 318
P PP P P
Sbjct: 603 QPPPPPPPPPP 613
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 34.7 bits (78), Expect = 0.45
Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 13/145 (8%)
Query: 223 EPTEDSGISLEMAAVTVKEESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQHVPSE 282
E T S S++ ++ E +E + +Q S + E E E PA Q ++
Sbjct: 695 ERTSTSSSSVQARRLSQPESAEK--HVTQRLQPERGSPKKCEAEEAEPPAATQPQTSETQ 752
Query: 283 TSEDPEVEV---TIEDDD---YSPPSKRPKANELPQPPVPEPANAGKRKVREFNFEKWNA 336
TS PE E T+E+ + RP+ N++P+PP+P E + E
Sbjct: 753 TSHLPESERIHHTVEEKEEVTMDTSENRPE-NDVPEPPMPIADQVSNDDRPEGSVEDEEK 811
Query: 337 RITDLRKQVEELFERKYAQAIKAKG 361
+ + L K F+RK + KG
Sbjct: 812 KESSLPKS----FKRKISVVSATKG 832
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 34.7 bits (78), Expect = 0.45
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 218 IKVKTEPTEDSGISLEMAAVTVKEESEDPDYYQYNIQGSHHSSEGNEGTE--MEVPAEDS 275
IKV E E + +S E+ V+E P+ + S G+ G + P ++
Sbjct: 1286 IKVSAE-AEVAPVSPEVTQEVVEEHCASPEDKTLEVVSPSQSVTGSAGHTPYYQSPTDEK 1344
Query: 276 TQHVPSETSE-DPEVEVTIEDDDYSPPSKRPKANELPQPPVPE 317
+ H+P+E E P V V+ E D ++R + + + PVP+
Sbjct: 1345 SSHLPTEVIEKPPAVPVSFEFSDAKDENERASVSPMDE-PVPD 1386
>gi|4557719 DNA ligase I [Homo sapiens]
Length = 919
Score = 34.3 bits (77), Expect = 0.59
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Query: 219 KVKTEPTEDSGISLEMAAVTVKEESEDPDYYQYNIQGSHHSSEGNEGTEMEVPAEDSTQH 278
+V E +ED + +EE+ + + +G++ T P + S
Sbjct: 135 EVLEEQSEDEDREAKRKKEEEEEETPKESLTEAEVATEKEGEDGDQPTTPPKPLKTSKAE 194
Query: 279 VPSETSEDPEV----EVTIEDDDYSPPSKRPK 306
P+E+ +PEV E+ E++ PP + PK
Sbjct: 195 TPTESVSEPEVATKQELQEEEEQTKPPRRAPK 226
Score = 30.8 bits (68), Expect = 6.5
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 263 NEGTEMEVPAEDSTQHVPSETSEDPEVEVTIEDDDYSPPSKRPK-----ANELPQPPVPE 317
+E E + E+ + P E+ + EV E +D P+ PK E P V E
Sbjct: 143 DEDREAKRKKEEEEEETPKESLTEAEVATEKEGEDGDQPTTPPKPLKTSKAETPTESVSE 202
Query: 318 PANAGKRKVRE 328
P A K++++E
Sbjct: 203 PEVATKQELQE 213
>gi|190684675 X-ray repair cross complementing protein 1 [Homo
sapiens]
Length = 633
Score = 33.9 bits (76), Expect = 0.77
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 15/111 (13%)
Query: 219 KVKTEPTEDSGISLEMAAVTVKEE-------SEDPDYYQYNIQGSHHSSEGNEGTEMEV- 270
+ KT+PT+ +G S T +E ED D +G + +E + TE E+
Sbjct: 434 QTKTKPTQAAGPSSPQKPPTPEETKAASPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELR 493
Query: 271 -PAEDSTQHVP---SETSEDPEVEVTIEDDDYSPPSKRPKANELPQPPVPE 317
AE +P E EDP T E+ D + P +LP P +P+
Sbjct: 494 RVAEQKEHRLPPGQEENGEDPYAGSTDENTDSEEHQEPP---DLPVPELPD 541
>gi|24308215 retrotransposon gag domain containing 1 [Homo sapiens]
Length = 1388
Score = 33.9 bits (76), Expect = 0.77
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 637 MASKINTKALQSPKRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVRTPT 685
M +K++ K L P + PG S P +T G N+P + + TPT
Sbjct: 710 MRAKVSGKMLSQPMSTQDPGGMSMSPMKSMTAGGMQMNSPTSDVMSTPT 758
>gi|239757124 PREDICTED: hypothetical protein [Homo sapiens]
Length = 106
Score = 33.5 bits (75), Expect = 1.00
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 121 CFCYGKALGKSTVVPVPYE--KMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKA 178
C Y + L S ++P E K R ++ +G+ + KH E DL L W++E
Sbjct: 5 CLLYERFLRTSPLLPTCGEDNKEKRSRNQKASRGMRCRIPIKHSEGADLTVLVWVVERDI 64
Query: 179 GISFIIKRPFLEPKKH 194
+ + PF P H
Sbjct: 65 SV-LSVSTPFRIPLNH 79
>gi|113428448 PREDICTED: hypothetical protein [Homo sapiens]
Length = 90
Score = 33.5 bits (75), Expect = 1.00
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 121 CFCYGKALGKSTVVPVPYE--KMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKA 178
C Y + L S ++P E K R ++ +G+ + KH E DL L W++E
Sbjct: 5 CLLYERFLRTSPLLPTCGEDNKEKRSRNQKASRGMRCRIPIKHSEGADLTVLVWVVERDI 64
Query: 179 GISFIIKRPFLEPKKH 194
+ + PF P H
Sbjct: 65 SV-LSVSTPFRIPLNH 79
>gi|169213522 PREDICTED: hypothetical protein [Homo sapiens]
Length = 106
Score = 33.5 bits (75), Expect = 1.00
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Query: 121 CFCYGKALGKSTVVPVPYE--KMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKA 178
C Y + L S ++P E K R ++ +G+ + KH E DL L W++E
Sbjct: 5 CLLYERFLRTSPLLPTCGEDNKEKRSRNQKASRGMRCRIPIKHSEGADLTVLVWVVERDI 64
Query: 179 GISFIIKRPFLEPKKH 194
+ + PF P H
Sbjct: 65 SV-LSVSTPFRIPLNH 79
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.133 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,500,831
Number of Sequences: 37866
Number of extensions: 1966429
Number of successful extensions: 6818
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 83
Number of HSP's that attempted gapping in prelim test: 6351
Number of HSP's gapped (non-prelim): 345
length of query: 978
length of database: 18,247,518
effective HSP length: 112
effective length of query: 866
effective length of database: 14,006,526
effective search space: 12129651516
effective search space used: 12129651516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.