Search of human proteins with 14589951

Search of human proteins with 14589951

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14589951 DNA directed RNA polymerase II polypeptide E [Homo
sapiens]
         (210 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14589951 DNA directed RNA polymerase II polypeptide E [Homo s...   421   e-118
gi|4505507 oligophrenin 1 [Homo sapiens]                               36   0.021
gi|150010661 SEC14-like 5 [Homo sapiens]                               35   0.060
gi|169172682 PREDICTED: hypothetical protein [Homo sapiens]            31   0.87 
gi|169172911 PREDICTED: hypothetical protein [Homo sapiens]            31   0.87 
gi|169172807 PREDICTED: hypothetical protein [Homo sapiens]            31   0.87 
gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens]     30   1.1  
gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]     30   1.1  
gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]     30   1.1  
gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens]     30   1.1  
gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]     30   1.1  
gi|56676391 activating signal cointegrator 1 complex subunit 1 [...    30   1.9  
gi|162951877 scinderin isoform 1 [Homo sapiens]                        30   1.9  
gi|14916473 scinderin isoform 2 [Homo sapiens]                         30   1.9  
gi|121114287 apoptosis-stimulating protein of p53, 1 [Homo sapiens]    29   3.3  
gi|47717139 leucine-zipper-like transcription regulator 1 [Homo ...    28   4.3  
gi|4506091 mitogen-activated protein kinase 6 [Homo sapiens]           28   4.3  
gi|19913356 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    28   5.6  
gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    28   5.6  
gi|6594683 Wolf-Hirschhorn syndrome candidate 1 protein isoform ...    28   5.6  
gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    28   5.6  
gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform...    28   5.6  
gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isofor...    28   5.6  
gi|21361086 tumor necrosis factor receptor superfamily, member 1...    27   9.6  
gi|54112390 calcium channel, voltage-dependent, alpha 2/delta su...    27   9.6  
gi|50897850 KIAA1914 protein isoform 1 [Homo sapiens]                  27   9.6  
gi|24308338 KIAA1914 protein isoform 2 [Homo sapiens]                  27   9.6  

>gi|14589951 DNA directed RNA polymerase II polypeptide E [Homo
           sapiens]
          Length = 210

 Score =  421 bits (1083), Expect = e-118
 Identities = 210/210 (100%), Positives = 210/210 (100%)

Query: 1   MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV 60
           MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
Sbjct: 1   MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV 60

Query: 61  LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD 120
           LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
Sbjct: 61  LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD 120

Query: 121 MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA 180
           MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
Sbjct: 121 MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA 180

Query: 181 RYFGIKRGQVVKIIRPSETAGRYITYRLVQ 210
           RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
Sbjct: 181 RYFGIKRGQVVKIIRPSETAGRYITYRLVQ 210


>gi|4505507 oligophrenin 1 [Homo sapiens]
          Length = 802

 Score = 36.2 bits (82), Expect = 0.021
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 68  PTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYIL 127
           PT + +++  E+  +GI  +K YCQ  +E   T+ L +      P AKQ  +D+  KY +
Sbjct: 266 PTIEGYLYTQEKWALGISWVKYYCQYEKE---TKTLTMTPMEQKPGAKQGPLDLTLKYCV 322

Query: 128 EQ 129
            +
Sbjct: 323 RR 324


>gi|150010661 SEC14-like 5 [Homo sapiens]
          Length = 696

 Score = 34.7 bits (78), Expect = 0.060
 Identities = 18/56 (32%), Positives = 28/56 (50%)

Query: 100 TRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEE 155
           TR   ++  G        LVD   + ++  FL  E + N+ E  LVP+ + MT+EE
Sbjct: 443 TRRKFLIYSGSNYQGPGGLVDYLDREVIPDFLGGESVCNVPEGGLVPKSLYMTEEE 498


>gi|169172682 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 8/65 (12%)

Query: 92  QRMQEENITRALIVVQQG--MTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHV 149
           Q  Q+      +IV++QG  +  S ++ ++ +AP+ +L+  L+  +L+      +VPEHV
Sbjct: 69  QNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLV------IVPEHV 122

Query: 150 VMTKE 154
           + +++
Sbjct: 123 LRSED 127


>gi|169172911 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 237

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 8/65 (12%)

Query: 92  QRMQEENITRALIVVQQG--MTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHV 149
           Q  Q+      +IV++QG  +  S ++ ++ +AP+ +L+  L+  +L+      +VPEHV
Sbjct: 69  QNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLV------IVPEHV 122

Query: 150 VMTKE 154
           + +++
Sbjct: 123 LRSED 127


>gi|169172807 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 277

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 17/65 (26%), Positives = 38/65 (58%), Gaps = 8/65 (12%)

Query: 92  QRMQEENITRALIVVQQG--MTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHV 149
           Q  Q+      +IV++QG  +  S ++ ++ +AP+ +L+  L+  +L+      +VPEHV
Sbjct: 69  QNQQDSGTEELMIVLEQGTEVRLSLEEVILILAPETVLQLTLENTVLV------IVPEHV 122

Query: 150 VMTKE 154
           + +++
Sbjct: 123 LRSED 127


>gi|221316687 SEC14 (S. cerevisiae)-like 1 isoform c [Homo sapiens]
          Length = 681

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/57 (29%), Positives = 26/57 (45%)

Query: 100 TRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEV 156
           TR   ++  G        L+D   K I+  FL  E +  + E  LVP+ +  T EE+
Sbjct: 422 TRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSGECMCEVPEGGLVPKSLYRTAEEL 478


>gi|221316680 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
          Length = 715

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/57 (29%), Positives = 26/57 (45%)

Query: 100 TRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEV 156
           TR   ++  G        L+D   K I+  FL  E +  + E  LVP+ +  T EE+
Sbjct: 456 TRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSGECMCEVPEGGLVPKSLYRTAEEL 512


>gi|221316676 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
          Length = 715

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/57 (29%), Positives = 26/57 (45%)

Query: 100 TRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEV 156
           TR   ++  G        L+D   K I+  FL  E +  + E  LVP+ +  T EE+
Sbjct: 456 TRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSGECMCEVPEGGLVPKSLYRTAEEL 512


>gi|221316684 SEC14 (S. cerevisiae)-like 1 isoform b [Homo sapiens]
          Length = 719

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/57 (29%), Positives = 26/57 (45%)

Query: 100 TRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEV 156
           TR   ++  G        L+D   K I+  FL  E +  + E  LVP+ +  T EE+
Sbjct: 456 TRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSGECMCEVPEGGLVPKSLYRTAEEL 512


>gi|221316682 SEC14 (S. cerevisiae)-like 1 isoform a [Homo sapiens]
          Length = 715

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/57 (29%), Positives = 26/57 (45%)

Query: 100 TRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEV 156
           TR   ++  G        L+D   K I+  FL  E +  + E  LVP+ +  T EE+
Sbjct: 456 TRRKFLIYAGNDYQGPGGLLDYIDKEIIPDFLSGECMCEVPEGGLVPKSLYRTAEEL 512


>gi|56676391 activating signal cointegrator 1 complex subunit 1
           [Homo sapiens]
          Length = 357

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 27  LVTQDELDQT---LEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVG 83
           L++++E+ QT   L++ K +F +  S G+P   ++  +   NDDP     ++     K G
Sbjct: 187 LLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEMAGIEYMNDDPGMVDVLYAKVHMKDG 246

Query: 84  IKTIKVYCQRMQEENITRALIV 105
              ++    R+ E      LIV
Sbjct: 247 SNRLQELVDRVLERFQASGLIV 268


>gi|162951877 scinderin isoform 1 [Homo sapiens]
          Length = 715

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 77  PEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPK 124
           P+E K  +KT + + Q+M     T+  ++ + G TP  KQ   D   K
Sbjct: 303 PQERKAAMKTAEEFLQQMNYSKNTQIQVLPEGGETPIFKQFFKDWRDK 350


>gi|14916473 scinderin isoform 2 [Homo sapiens]
          Length = 468

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 77  PEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPK 124
           P+E K  +KT + + Q+M     T+  ++ + G TP  KQ   D   K
Sbjct: 56  PQERKAAMKTAEEFLQQMNYSKNTQIQVLPEGGETPIFKQFFKDWRDK 103


>gi|121114287 apoptosis-stimulating protein of p53, 1 [Homo sapiens]
          Length = 1090

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 30/147 (20%), Positives = 60/147 (40%), Gaps = 16/147 (10%)

Query: 53  PRRTDLTVLVAHNDDPTD--QMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGM 110
           PRR ++   + H D PT+  +      +E +     I V  ++  E  +    + +    
Sbjct: 71  PRREEVKFFLRHEDSPTENSEQGGRQTQEQRTQRNVINVPGEKRTENGVGNPRVEL---- 126

Query: 111 TPSAKQSLVDMAPKYILEQFLQQELLIN-------ITEHELVPEHVVMTKEEVTELLARY 163
                  L DMA +   +   QQ++L+        + + E   +  +   E++ +L  R 
Sbjct: 127 ---TLSELQDMAARQQQQIENQQQMLVAKEQRLHFLKQQERRQQQSISENEKLQKLKERV 183

Query: 164 KLRENQLPRIQAGDPVARYFGIKRGQV 190
           + +EN+L +I+A      Y  I  G +
Sbjct: 184 EAQENKLKKIRAMRGQVDYSKIMNGNL 210


>gi|47717139 leucine-zipper-like transcription regulator 1 [Homo
           sapiens]
          Length = 840

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 10/126 (7%)

Query: 23  DRGYLVTQDELDQTLEEFKAQFGDKPS--EGRPRRTDLTVLVAHNDDPTDQMFVFFPEEP 80
           D G  + QD +   LE   A+F D     +G PR     +L A +         F PE+ 
Sbjct: 646 DIGTSLIQD-MKAYLEGAGAEFCDITLLLDGHPRPAHKAILAARSSYFEAMFRSFMPEDG 704

Query: 81  KVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKYI------LEQFLQQE 134
           +V I   ++   R   E++ R +   +  M P     L   AP Y       L+ + +Q 
Sbjct: 705 QVNISIGEMVPSRQAFESMLRYIYYGEVNMPPEDSLYLF-AAPYYYGFYNNRLQAYCKQN 763

Query: 135 LLINIT 140
           L +N+T
Sbjct: 764 LEMNVT 769


>gi|4506091 mitogen-activated protein kinase 6 [Homo sapiens]
          Length = 721

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 11/78 (14%)

Query: 77  PEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQ------SLVDMAPKYILEQF 130
           P+  K  ++ IK+  +R+  +NI +   +    + PS  Q      SL ++   YI++++
Sbjct: 56  PQSVKHALREIKII-RRLDHDNIVKVFEI----LGPSGSQLTDDVGSLTELNSVYIVQEY 110

Query: 131 LQQELLINITEHELVPEH 148
           ++ +L   + +  L+ EH
Sbjct: 111 METDLANVLEQGPLLEEH 128


>gi|19913356 Wolf-Hirschhorn syndrome candidate 1 protein isoform 3
           [Homo sapiens]
          Length = 647

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 109 GMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELL-------- 160
           G  P  K++ V M      +   Q  +       E+V EH   + EE+ ELL        
Sbjct: 436 GSPPGRKKTTVSMPRSRKGDAASQFLVFCQKHRDEVVAEHPDASGEEIEELLRSQWSLLS 495

Query: 161 ----ARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETA 200
               ARY  +   +  +QA +      G KR    +I  P+E A
Sbjct: 496 EKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDA 539


>gi|19913358 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
           [Homo sapiens]
          Length = 1365

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 109 GMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELL-------- 160
           G  P  K++ V M      +   Q  +       E+V EH   + EE+ ELL        
Sbjct: 436 GSPPGRKKTTVSMPRSRKGDAASQFLVFCQKHRDEVVAEHPDASGEEIEELLRSQWSLLS 495

Query: 161 ----ARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETA 200
               ARY  +   +  +QA +      G KR    +I  P+E A
Sbjct: 496 EKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDA 539


>gi|6594683 Wolf-Hirschhorn syndrome candidate 1 protein isoform 4
           [Homo sapiens]
          Length = 629

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 109 GMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELL-------- 160
           G  P  K++ V M      +   Q  +       E+V EH   + EE+ ELL        
Sbjct: 436 GSPPGRKKTTVSMPRSRKGDAASQFLVFCQKHRDEVVAEHPDASGEEIEELLRSQWSLLS 495

Query: 161 ----ARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETA 200
               ARY  +   +  +QA +      G KR    +I  P+E A
Sbjct: 496 EKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDA 539


>gi|19913350 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
           [Homo sapiens]
          Length = 1365

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 109 GMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELL-------- 160
           G  P  K++ V M      +   Q  +       E+V EH   + EE+ ELL        
Sbjct: 436 GSPPGRKKTTVSMPRSRKGDAASQFLVFCQKHRDEVVAEHPDASGEEIEELLRSQWSLLS 495

Query: 161 ----ARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETA 200
               ARY  +   +  +QA +      G KR    +I  P+E A
Sbjct: 496 EKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDA 539


>gi|19913348 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
           [Homo sapiens]
          Length = 1365

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 109 GMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELL-------- 160
           G  P  K++ V M      +   Q  +       E+V EH   + EE+ ELL        
Sbjct: 436 GSPPGRKKTTVSMPRSRKGDAASQFLVFCQKHRDEVVAEHPDASGEEIEELLRSQWSLLS 495

Query: 161 ----ARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETA 200
               ARY  +   +  +QA +      G KR    +I  P+E A
Sbjct: 496 EKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDA 539


>gi|109633019 Wolf-Hirschhorn syndrome candidate 1 protein isoform 1
           [Homo sapiens]
          Length = 1365

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 109 GMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELL-------- 160
           G  P  K++ V M      +   Q  +       E+V EH   + EE+ ELL        
Sbjct: 436 GSPPGRKKTTVSMPRSRKGDAASQFLVFCQKHRDEVVAEHPDASGEEIEELLRSQWSLLS 495

Query: 161 ----ARYKLRENQLPRIQAGDPVARYFGIKRGQVVKIIRPSETA 200
               ARY  +   +  +QA +      G KR    +I  P+E A
Sbjct: 496 EKQRARYNTKFALVAPVQAEEDSGNVNGKKRNHTKRIQDPTEDA 539


>gi|21361086 tumor necrosis factor receptor superfamily, member 10a
           [Homo sapiens]
          Length = 468

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 35  QTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRM 94
           Q+  E +   G   +EG  RR  L  + A+  DPT+ + +FF  +    I     + Q M
Sbjct: 329 QSPGEAQCLLGPAEAEGSQRRRLL--VPANGADPTETLMLFF--DKFANIVPFDSWDQLM 384

Query: 95  QEENITRALIVVQQGMTPSAKQSLVDMAPKYI 126
           ++ ++T+  I V +  T     +L  M  K++
Sbjct: 385 RQLDLTKNEIDVVRAGTAGPGDALYAMLMKWV 416


>gi|54112390 calcium channel, voltage-dependent, alpha 2/delta
           subunit 1 [Homo sapiens]
          Length = 1091

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 7/48 (14%)

Query: 78  EEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVDMAPKY 125
           EEP     TIK +  +MQE+ +T A        T S    LVD+  KY
Sbjct: 24  EEPFPSAVTIKSWVDKMQEDLVTLA-------KTASGVNQLVDIYEKY 64


>gi|50897850 KIAA1914 protein isoform 1 [Homo sapiens]
          Length = 818

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 12/141 (8%)

Query: 33  LDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQ 92
           LD   E   A  G  P+   P       +    +    Q+    PE+P + I T+K+  +
Sbjct: 565 LDNATEALPADSGPGPTPDEP------CIKCPENLGEQQLESLEPEDPSLRITTVKIQTE 618

Query: 93  RMQ---EENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHV 149
           + +     +   A++    G +P  K  L   + +  L +   +  +   TE +   E +
Sbjct: 619 QQRISFPPSCPDAVVATPPGASPPVKDRLRVTSAEIKLGKNRTEAEVKRYTEEK---ERL 675

Query: 150 VMTKEEVTELLARYKLRENQL 170
              KEE+   LA+ +  + +L
Sbjct: 676 EKKKEEIRGHLAQLRKEKREL 696


>gi|24308338 KIAA1914 protein isoform 2 [Homo sapiens]
          Length = 814

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 12/141 (8%)

Query: 33  LDQTLEEFKAQFGDKPSEGRPRRTDLTVLVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQ 92
           LD   E   A  G  P+   P       +    +    Q+    PE+P + I T+K+  +
Sbjct: 565 LDNATEALPADSGPGPTPDEP------CIKCPENLGEQQLESLEPEDPSLRITTVKIQTE 618

Query: 93  RMQ---EENITRALIVVQQGMTPSAKQSLVDMAPKYILEQFLQQELLINITEHELVPEHV 149
           + +     +   A++    G +P  K  L   + +  L +   +  +   TE +   E +
Sbjct: 619 QQRISFPPSCPDAVVATPPGASPPVKDRLRVTSAEIKLGKNRTEAEVKRYTEEK---ERL 675

Query: 150 VMTKEEVTELLARYKLRENQL 170
              KEE+   LA+ +  + +L
Sbjct: 676 EKKKEEIRGHLAQLRKEKREL 696


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,674,116
Number of Sequences: 37866
Number of extensions: 322841
Number of successful extensions: 822
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 811
Number of HSP's gapped (non-prelim): 28
length of query: 210
length of database: 18,247,518
effective HSP length: 98
effective length of query: 112
effective length of database: 14,536,650
effective search space: 1628104800
effective search space used: 1628104800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.