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Search of human proteins with 145275195
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens]
(478 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens] 965 0.0
gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo sap... 434 e-122
gi|24308408 Cdk5 and Abl enzyme substrate 1 isoform 1 [Homo sapi... 428 e-120
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 69 1e-11
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 60 3e-09
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 57 4e-08
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 57 5e-08
gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo ... 55 1e-07
gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo ... 55 1e-07
gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo ... 55 1e-07
gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo ... 55 1e-07
gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo s... 55 1e-07
gi|33356148 formin-like 1 [Homo sapiens] 55 2e-07
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 54 2e-07
gi|7706501 WW domain binding protein 11 [Homo sapiens] 54 2e-07
gi|110832843 TBP-associated factor 4 [Homo sapiens] 54 4e-07
gi|11386183 WAS protein family, member 2 [Homo sapiens] 53 5e-07
gi|160707881 formin 2 [Homo sapiens] 53 5e-07
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 53 7e-07
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 53 7e-07
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 53 7e-07
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso... 52 9e-07
gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isof... 52 9e-07
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 52 1e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 52 1e-06
gi|153792074 proline rich 12 [Homo sapiens] 52 1e-06
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 51 3e-06
gi|46852172 kinesin family member 13B [Homo sapiens] 51 3e-06
gi|118498339 EMI domain containing 2 [Homo sapiens] 51 3e-06
gi|238859557 regulatory factor X1 [Homo sapiens] 50 3e-06
>gi|145275195 Cdk5 and Abl enzyme substrate 2 [Homo sapiens]
Length = 478
Score = 965 bits (2494), Expect = 0.0
Identities = 478/478 (100%), Positives = 478/478 (100%)
Query: 1 MAAAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGR 60
MAAAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGR
Sbjct: 1 MAAAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGR 60
Query: 61 PPSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGLDGQRQ 120
PPSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGLDGQRQ
Sbjct: 61 PPSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGLDGQRQ 120
Query: 121 RKRVTSQRCSLEFLEDAVGCAPAQRTKHTSGSPRHKGLKKTHFIKNMRQYDTRNSRIVLI 180
RKRVTSQRCSLEFLEDAVGCAPAQRTKHTSGSPRHKGLKKTHFIKNMRQYDTRNSRIVLI
Sbjct: 121 RKRVTSQRCSLEFLEDAVGCAPAQRTKHTSGSPRHKGLKKTHFIKNMRQYDTRNSRIVLI 180
Query: 181 CAKRSLCAAFSVLPYGEGLRISDLRVDSQKQRHPSGGVSVSSEMVFELEGVELGADGKVV 240
CAKRSLCAAFSVLPYGEGLRISDLRVDSQKQRHPSGGVSVSSEMVFELEGVELGADGKVV
Sbjct: 181 CAKRSLCAAFSVLPYGEGLRISDLRVDSQKQRHPSGGVSVSSEMVFELEGVELGADGKVV 240
Query: 241 SYAKFLYPTNALVTHKSDSHGLLPTPRPSVPRTLPGSRHKPAPTKSAPASTELGSDVGDT 300
SYAKFLYPTNALVTHKSDSHGLLPTPRPSVPRTLPGSRHKPAPTKSAPASTELGSDVGDT
Sbjct: 241 SYAKFLYPTNALVTHKSDSHGLLPTPRPSVPRTLPGSRHKPAPTKSAPASTELGSDVGDT 300
Query: 301 LEYNPNLLDDPQWPCGKHKRVLIFASYMTTVIEYVKPSDLKKDMNETFREKFPHVKLTLS 360
LEYNPNLLDDPQWPCGKHKRVLIFASYMTTVIEYVKPSDLKKDMNETFREKFPHVKLTLS
Sbjct: 301 LEYNPNLLDDPQWPCGKHKRVLIFASYMTTVIEYVKPSDLKKDMNETFREKFPHVKLTLS 360
Query: 361 KIRSLKREMRSLSEECSLEPVTVAMAYVYFEKLVLQGKLSKQNRKLCAGACVLLAAKISS 420
KIRSLKREMRSLSEECSLEPVTVAMAYVYFEKLVLQGKLSKQNRKLCAGACVLLAAKISS
Sbjct: 361 KIRSLKREMRSLSEECSLEPVTVAMAYVYFEKLVLQGKLSKQNRKLCAGACVLLAAKISS 420
Query: 421 DLRKSGVTQLIDKLEERFRFNRRDLIGFEFTVLVALELALYLPENQVLPHYRRLTQQF 478
DLRKSGVTQLIDKLEERFRFNRRDLIGFEFTVLVALELALYLPENQVLPHYRRLTQQF
Sbjct: 421 DLRKSGVTQLIDKLEERFRFNRRDLIGFEFTVLVALELALYLPENQVLPHYRRLTQQF 478
>gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo
sapiens]
Length = 633
Score = 434 bits (1116), Expect = e-122
Identities = 231/362 (63%), Positives = 271/362 (74%), Gaps = 12/362 (3%)
Query: 118 QRQRKRVTSQRCSLEFLEDAVGCAPAQRTKHTSGSPRHKGLKKTHFIKNMRQYDTRNSRI 177
QR R+R+ SQR SLE LED AP +R + SGSPR K KK HFIKNMRQ+DTRN RI
Sbjct: 279 QRSRRRLISQRSSLETLEDIEENAPLRRCRTLSGSPRPKNFKKIHFIKNMRQHDTRNGRI 338
Query: 178 VLICAKRSLCAAFSVLPYGEGLRISDLRVDSQKQRHPSGGVSVSSEMVFELEGVELGADG 237
VLI +RS C+ FSVLPY + ++ DL++D +Q +G VS+ + LEGVELGADG
Sbjct: 339 VLISGRRSFCSIFSVLPYRDSTQVGDLKLDGGRQS--TGAVSLKE--IIGLEGVELGADG 394
Query: 238 KVVSYAKFLYPTNALVTHKS--DSHGLLPTPRPSVPRTLPGSRHKPAPTKSAPASTELGS 295
K VSY +FL PTNA ++ DS R R+L R S + GS
Sbjct: 395 KTVSYTQFLLPTNAFGARRNTIDSTSSFSQFRNLSHRSLSIGR-----ASGTQGSLDTGS 449
Query: 296 DVGDTLEYNPNLLDDPQWPCGKHKRVLIFASYMTTVIEYVKPSDLKKDMNETFREKFPHV 355
D+GD ++Y+PNLLDDPQWPCGKHKRVLIF SYMTTVI+YVKPSDLKKDMNETF+EKFPH+
Sbjct: 450 DLGDFMDYDPNLLDDPQWPCGKHKRVLIFPSYMTTVIDYVKPSDLKKDMNETFKEKFPHI 509
Query: 356 KLTLSKIRSLKREMRSLSEE-CSLEPVTVAMAYVYFEKLVLQGKLSKQNRKLCAGACVLL 414
KLTLSKIRSLKREMR L++E C LE TVAMA+VYFEKL L+GKL+KQNRKLCAGACVLL
Sbjct: 510 KLTLSKIRSLKREMRKLAQEDCGLEEPTVAMAFVYFEKLALKGKLNKQNRKLCAGACVLL 569
Query: 415 AAKISSDLRKSGVTQLIDKLEERFRFNRRDLIGFEFTVLVALELALYLPENQVLPHYRRL 474
AAKI SDL+K V LIDKLEE+FR NRR+LI FEF VLVALE AL+LPE++V+PHYRRL
Sbjct: 570 AAKIGSDLKKHEVKHLIDKLEEKFRLNRRELIAFEFPVLVALEFALHLPEHEVMPHYRRL 629
Query: 475 TQ 476
Q
Sbjct: 630 VQ 631
Score = 55.1 bits (131), Expect = 1e-07
Identities = 34/61 (55%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 3 AAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRR-RGDSRRRQAALFFLNNISLDGRP 61
AA A G P P P P AAP A+ PP+ R+ R D RRRQAAL FL NISLDGR
Sbjct: 22 AAGASGLQQPPPQPQPQPAAAAP---AQPPPEPPRKPRMDPRRRQAALSFLTNISLDGRL 78
Query: 62 P 62
P
Sbjct: 79 P 79
Score = 32.7 bits (73), Expect = 0.74
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 10/59 (16%)
Query: 65 GPGGEKPPPP---PAEAREPPAPPPPEPPTGLPARTPA--PQGLLSPTQVPTGLGLDGQ 118
G G + PPP P A PA PPPEPP R P P+ + T + LDG+
Sbjct: 24 GASGLQQPPPQPQPQPAAAAPAQPPPEPP-----RKPRMDPRRRQAALSFLTNISLDGR 77
>gi|24308408 Cdk5 and Abl enzyme substrate 1 isoform 1 [Homo
sapiens]
Length = 368
Score = 428 bits (1101), Expect = e-120
Identities = 228/358 (63%), Positives = 268/358 (74%), Gaps = 12/358 (3%)
Query: 122 KRVTSQRCSLEFLEDAVGCAPAQRTKHTSGSPRHKGLKKTHFIKNMRQYDTRNSRIVLIC 181
+R+ SQR SLE LED AP +R + SGSPR K KK HFIKNMRQ+DTRN RIVLI
Sbjct: 18 RRLISQRSSLETLEDIEENAPLRRCRTLSGSPRPKNFKKIHFIKNMRQHDTRNGRIVLIS 77
Query: 182 AKRSLCAAFSVLPYGEGLRISDLRVDSQKQRHPSGGVSVSSEMVFELEGVELGADGKVVS 241
+RS C+ FSVLPY + ++ DL++D +Q +G VS+ + LEGVELGADGK VS
Sbjct: 78 GRRSFCSIFSVLPYRDSTQVGDLKLDGGRQS--TGAVSLKE--IIGLEGVELGADGKTVS 133
Query: 242 YAKFLYPTNALVTHKS--DSHGLLPTPRPSVPRTLPGSRHKPAPTKSAPASTELGSDVGD 299
Y +FL PTNA ++ DS R R+L R S + GSD+GD
Sbjct: 134 YTQFLLPTNAFGARRNTIDSTSSFSQFRNLSHRSLSIGR-----ASGTQGSLDTGSDLGD 188
Query: 300 TLEYNPNLLDDPQWPCGKHKRVLIFASYMTTVIEYVKPSDLKKDMNETFREKFPHVKLTL 359
++Y+PNLLDDPQWPCGKHKRVLIF SYMTTVI+YVKPSDLKKDMNETF+EKFPH+KLTL
Sbjct: 189 FMDYDPNLLDDPQWPCGKHKRVLIFPSYMTTVIDYVKPSDLKKDMNETFKEKFPHIKLTL 248
Query: 360 SKIRSLKREMRSLSEE-CSLEPVTVAMAYVYFEKLVLQGKLSKQNRKLCAGACVLLAAKI 418
SKIRSLKREMR L++E C LE TVAMA+VYFEKL L+GKL+KQNRKLCAGACVLLAAKI
Sbjct: 249 SKIRSLKREMRKLAQEDCGLEEPTVAMAFVYFEKLALKGKLNKQNRKLCAGACVLLAAKI 308
Query: 419 SSDLRKSGVTQLIDKLEERFRFNRRDLIGFEFTVLVALELALYLPENQVLPHYRRLTQ 476
SDL+K V LIDKLEE+FR NRR+LI FEF VLVALE AL+LPE++V+PHYRRL Q
Sbjct: 309 GSDLKKHEVKHLIDKLEEKFRLNRRELIAFEFPVLVALEFALHLPEHEVMPHYRRLVQ 366
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 68.6 bits (166), Expect = 1e-11
Identities = 41/109 (37%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 3 AAAAGGAPGPAPGPAGPPPPAAPTSAARAP---------PQALRRRGDSRRRQAALFFLN 53
AAAA AP P P P PP P A + ARAP P + R Q A
Sbjct: 120 AAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAA 179
Query: 54 NISLDGRPPSLGP--GGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAP 100
PP++ P G + PPP AREPP PPPP+PP + P P
Sbjct: 180 PPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPP 228
Score = 33.9 bits (76), Expect = 0.33
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 9/64 (14%)
Query: 60 RPPSLGPGGEKPPPPP-------AEAREPPAPPPPEPPTGLPARTP--APQGLLSPTQVP 110
+PP G PP P A A PP P PP PP + A P AP+ + P
Sbjct: 100 QPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAP 159
Query: 111 TGLG 114
G
Sbjct: 160 PSPG 163
Score = 31.6 bits (70), Expect = 1.7
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 7/52 (13%)
Query: 59 GRPPSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVP 110
G P P + P A A PP P P PP PAP +P + P
Sbjct: 105 GATPPAPPRAPRGAPAAAAAAAPPPTPAPPPP-------PAPVAAAAPARAP 149
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 60.5 bits (145), Expect = 3e-09
Identities = 49/121 (40%), Positives = 52/121 (42%), Gaps = 14/121 (11%)
Query: 7 GGAPGPAPGP--AGPPPPAA------PTSAARAPPQALRRRGDSRRRQAALFFLNNISLD 58
GG P P P P +GPPPP A P +RAP A SR A N
Sbjct: 285 GGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYP 344
Query: 59 GRPPSL---GPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLS--PTQVPTGL 113
PP+L P G PPPP P APPPP PP P P P GL S QVPT
Sbjct: 345 PPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPP-PPGPPPPPGLPSDGDHQVPTTA 403
Query: 114 G 114
G
Sbjct: 404 G 404
Score = 43.5 bits (101), Expect = 4e-04
Identities = 20/46 (43%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 61 PPSLGPGGEKPPPPPAEAREPPAPP------PPEPPTGLPARTPAP 100
PP GG PPPPP PP PP PP PP+ P P P
Sbjct: 279 PPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPP 324
Score = 37.0 bits (84), Expect = 0.039
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 69 EKPPPPPAEAREPPAPPP------PEPPTGLPARTPAPQGLLSPTQVP 110
+ PPPPP PP PPP P PP P P +PT P
Sbjct: 275 QAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAP 322
Score = 30.4 bits (67), Expect = 3.7
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 6/47 (12%)
Query: 1 MAAAAAGGAPGPAP-----GP-AGPPPPAAPTSAARAPPQALRRRGD 41
+ ++A G P P P GP A PPPP P PP L GD
Sbjct: 350 LPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGD 396
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 57.0 bits (136), Expect = 4e-08
Identities = 46/132 (34%), Positives = 49/132 (37%), Gaps = 33/132 (25%)
Query: 4 AAAGGAPGP-------------APGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALF 50
A GG P P PGP GPP P P P RGD R LF
Sbjct: 221 AGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGD-RPPPPVLF 279
Query: 51 FLNNISLDGRP---PSLGPGGEKPPPPPAEAREPPAPPPPE-----PPTGLPARTPAPQG 102
G+P P LGP PPPP PP PPPP+ PP P R P P G
Sbjct: 280 -------PGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLG 332
Query: 103 ----LLSPTQVP 110
L P +P
Sbjct: 333 PPLTLAPPPHLP 344
Score = 41.6 bits (96), Expect = 0.002
Identities = 41/140 (29%), Positives = 47/140 (33%), Gaps = 33/140 (23%)
Query: 8 GAPGPAPGPAGPPPP--------AAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDG 59
G PGP PGP GPPPP A P + PP + G + L +
Sbjct: 242 GPPGP-PGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPP----LGPLPPGP 296
Query: 60 RPPSLG----------------PGGEKPPPPPAEAREP--PAPPP--PEPPTGLPARTPA 99
PP G P G PP PP P APPP P PP G P P
Sbjct: 297 PPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPH 356
Query: 100 PQGLLSPTQVPTGLGLDGQR 119
P +G+ R
Sbjct: 357 VNPAFFPPPTNSGMPTSDSR 376
Score = 40.4 bits (93), Expect = 0.004
Identities = 28/76 (36%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 15 GPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGEKPPPP 74
G AGPP S+ A PQ R RG + G PP P G+ PP P
Sbjct: 184 GKAGPPGG----SSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRP 239
Query: 75 PAEAREPPAPPPPEPP 90
P PP PP P PP
Sbjct: 240 PLGPPGPPGPPGPPPP 255
Score = 38.9 bits (89), Expect = 0.010
Identities = 33/103 (32%), Positives = 37/103 (35%), Gaps = 35/103 (33%)
Query: 7 GGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGP 66
G PGP P GPPPP P PP L G P +L P
Sbjct: 304 GPPPGPPPPQQGPPPPPGPFPPR--PPGPL----------------------GPPLTLAP 339
Query: 67 GGEKPPPPPAEAREPPAPP------PPEPPTGLP---ARTPAP 100
P PPP PPAP PP +G+P +R P P
Sbjct: 340 PPHLPGPPP--GAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPP 380
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 56.6 bits (135), Expect = 5e-08
Identities = 34/105 (32%), Positives = 41/105 (39%), Gaps = 24/105 (22%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
PGPAPG G PPA+ ++ PP + G PP GPG
Sbjct: 115 PGPAPG-VGSAPPASSSAPPATPPTS-----------------------GAPPGSGPGPT 150
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLG 114
PPP + P APPP P +G+P P G P G G
Sbjct: 151 PTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPG 195
Score = 43.9 bits (102), Expect = 3e-04
Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 20/97 (20%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
+G PG PGP PPPA ++ APP G P+
Sbjct: 139 SGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSG--------------------VPTTP 178
Query: 66 PGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQG 102
P PPPPPA P P P G P P G
Sbjct: 179 PQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGG 215
Score = 42.4 bits (98), Expect = 0.001
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 20/93 (21%)
Query: 8 GAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPG 67
G GP PG +GP PP P PP +++ ++ PP P
Sbjct: 45 GPMGPGPGQSGPKPPIPPP-----PPHQQQQQPPPQQP---------------PPQQPPP 84
Query: 68 GEKPPPPPAEAREPPAPPPPEPPTGLPARTPAP 100
+ PP P ++ P PPP + + A+ P P
Sbjct: 85 HQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGP 117
Score = 40.0 bits (92), Expect = 0.005
Identities = 37/114 (32%), Positives = 43/114 (37%), Gaps = 27/114 (23%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P P PPP P + PP DS + A G P+ G G
Sbjct: 78 PPQQPPPHQPPPHPQPHQQQQPPPPPQ----DSSKPVVA---------QGPGPAPGVGS- 123
Query: 70 KPPPPPAEAREPPAPPP---------PEP-PTGLPARTPAPQGLLSPTQVPTGL 113
PPA + PPA PP P P PT PA T AP G PT +G+
Sbjct: 124 ---APPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGV 174
Score = 39.3 bits (90), Expect = 0.008
Identities = 27/104 (25%), Positives = 35/104 (33%), Gaps = 32/104 (30%)
Query: 2 AAAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRP 61
A A+ AP P +G PP + P PP ++ P
Sbjct: 124 APPASSSAPPATPPTSGAPPGSGPGPTPTPPP----------------------AVTSAP 161
Query: 62 PSLGPGGEKPPPPPAEAREPPAPP----PPEPPTGLPARTPAPQ 101
P PPP P + P PP PP PP +P P P+
Sbjct: 162 PG------APPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPK 199
Score = 37.7 bits (86), Expect = 0.023
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 61 PPSLGPGGEKPPPPPAEARE---PPAPPPPEPPTGLPARTPAPQGLLSPTQVP 110
P GP PPPPP + ++ P PPP +PP P P P P P
Sbjct: 51 PGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPP 103
Score = 32.7 bits (73), Expect = 0.74
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 61 PPSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQ 101
PP +G + P P + P PP P PP + P PQ
Sbjct: 35 PPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQ 75
Score = 31.6 bits (70), Expect = 1.7
Identities = 45/170 (26%), Positives = 55/170 (32%), Gaps = 44/170 (25%)
Query: 4 AAAGGAPGPAPGPAG-----------PPPPAAPTSAARAPPQALRRRGDSRRRQAALFFL 52
+A GAP P P +G PPPPAA P Q G +
Sbjct: 159 SAPPGAPPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPG---- 214
Query: 53 NNISLDGRPPSLGPG----GEKPPPPPAEAREPPAPPPPEPP------TGLPARTPAPQG 102
G P GPG G P PP EP PP G P P G
Sbjct: 215 ------GPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPP---PGGPG 265
Query: 103 LLSPTQVPTGLGLDG-----QRQRKRVTSQRCSLEFLEDAVGCAPAQRTK 147
S ++ G +R ++ +QRC L VG PA T+
Sbjct: 266 GRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRL-----FVGNLPADITE 310
>gi|13027650 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 55.5 bits (132), Expect = 1e-07
Identities = 46/133 (34%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 1 MAAAAAGGAPGPAPG---PAGPPPPAAPTSAAR-----APPQALRRRGDSRRRQAALFFL 52
+A AA G G A G PAG P P AP A P R AA
Sbjct: 97 LAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVA 156
Query: 53 NNISLDGRPPSLGPGGEKPPPPPAEAREPP---APPPPE-----PPTGLPARTPAPQGLL 104
S+ G P PG PPPP A PP APPP PP GLP P G+
Sbjct: 157 ATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMP 216
Query: 105 SPTQVPTGLGLDG 117
P P G+ G
Sbjct: 217 PPGMRPPPPGIRG 229
Score = 42.7 bits (99), Expect = 7e-04
Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 2 AAAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRP 61
A A+ GAP P G PPP P A PP + R L G P
Sbjct: 157 ATASIAGAPTQYPPGRGTPPP--PVGRATPPPGIMAPPPGMRPPMGPPIGLPPAR--GTP 212
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPPEP 89
+ P G +PPPP PP PP P
Sbjct: 213 IGMPPPGMRPPPPGIRGPPPPGMRPPRP 240
>gi|13027648 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 55.5 bits (132), Expect = 1e-07
Identities = 46/133 (34%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 1 MAAAAAGGAPGPAPG---PAGPPPPAAPTSAAR-----APPQALRRRGDSRRRQAALFFL 52
+A AA G G A G PAG P P AP A P R AA
Sbjct: 97 LAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVA 156
Query: 53 NNISLDGRPPSLGPGGEKPPPPPAEAREPP---APPPPE-----PPTGLPARTPAPQGLL 104
S+ G P PG PPPP A PP APPP PP GLP P G+
Sbjct: 157 ATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMP 216
Query: 105 SPTQVPTGLGLDG 117
P P G+ G
Sbjct: 217 PPGMRPPPPGIRG 229
Score = 42.7 bits (99), Expect = 7e-04
Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 2 AAAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRP 61
A A+ GAP P G PPP P A PP + R L G P
Sbjct: 157 ATASIAGAPTQYPPGRGTPPP--PVGRATPPPGIMAPPPGMRPPMGPPIGLPPAR--GTP 212
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPPEP 89
+ P G +PPPP PP PP P
Sbjct: 213 IGMPPPGMRPPPPGIRGPPPPGMRPPRP 240
>gi|13027646 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 55.5 bits (132), Expect = 1e-07
Identities = 46/133 (34%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 1 MAAAAAGGAPGPAPG---PAGPPPPAAPTSAAR-----APPQALRRRGDSRRRQAALFFL 52
+A AA G G A G PAG P P AP A P R AA
Sbjct: 97 LAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVA 156
Query: 53 NNISLDGRPPSLGPGGEKPPPPPAEAREPP---APPPPE-----PPTGLPARTPAPQGLL 104
S+ G P PG PPPP A PP APPP PP GLP P G+
Sbjct: 157 ATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMP 216
Query: 105 SPTQVPTGLGLDG 117
P P G+ G
Sbjct: 217 PPGMRPPPPGIRG 229
Score = 42.7 bits (99), Expect = 7e-04
Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 2 AAAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRP 61
A A+ GAP P G PPP P A PP + R L G P
Sbjct: 157 ATASIAGAPTQYPPGRGTPPP--PVGRATPPPGIMAPPPGMRPPMGPPIGLPPAR--GTP 212
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPPEP 89
+ P G +PPPP PP PP P
Sbjct: 213 IGMPPPGMRPPPPGIRGPPPPGMRPPRP 240
>gi|13027644 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 55.5 bits (132), Expect = 1e-07
Identities = 46/133 (34%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 1 MAAAAAGGAPGPAPG---PAGPPPPAAPTSAAR-----APPQALRRRGDSRRRQAALFFL 52
+A AA G G A G PAG P P AP A P R AA
Sbjct: 97 LAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVA 156
Query: 53 NNISLDGRPPSLGPGGEKPPPPPAEAREPP---APPPPE-----PPTGLPARTPAPQGLL 104
S+ G P PG PPPP A PP APPP PP GLP P G+
Sbjct: 157 ATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMP 216
Query: 105 SPTQVPTGLGLDG 117
P P G+ G
Sbjct: 217 PPGMRPPPPGIRG 229
Score = 42.7 bits (99), Expect = 7e-04
Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 2 AAAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRP 61
A A+ GAP P G PPP P A PP + R L G P
Sbjct: 157 ATASIAGAPTQYPPGRGTPPP--PVGRATPPPGIMAPPPGMRPPMGPPIGLPPAR--GTP 212
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPPEP 89
+ P G +PPPP PP PP P
Sbjct: 213 IGMPPPGMRPPPPGIRGPPPPGMRPPRP 240
>gi|4507135 small nuclear ribonucleoprotein polypeptide N [Homo
sapiens]
Length = 240
Score = 55.5 bits (132), Expect = 1e-07
Identities = 46/133 (34%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 1 MAAAAAGGAPGPAPG---PAGPPPPAAPTSAAR-----APPQALRRRGDSRRRQAALFFL 52
+A AA G G A G PAG P P AP A P R AA
Sbjct: 97 LAGAAGGPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVA 156
Query: 53 NNISLDGRPPSLGPGGEKPPPPPAEAREPP---APPPPE-----PPTGLPARTPAPQGLL 104
S+ G P PG PPPP A PP APPP PP GLP P G+
Sbjct: 157 ATASIAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMP 216
Query: 105 SPTQVPTGLGLDG 117
P P G+ G
Sbjct: 217 PPGMRPPPPGIRG 229
Score = 42.7 bits (99), Expect = 7e-04
Identities = 29/88 (32%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 2 AAAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRP 61
A A+ GAP P G PPP P A PP + R L G P
Sbjct: 157 ATASIAGAPTQYPPGRGTPPP--PVGRATPPPGIMAPPPGMRPPMGPPIGLPPAR--GTP 212
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPPEP 89
+ P G +PPPP PP PP P
Sbjct: 213 IGMPPPGMRPPPPGIRGPPPPGMRPPRP 240
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 54.7 bits (130), Expect = 2e-07
Identities = 39/110 (35%), Positives = 40/110 (36%), Gaps = 26/110 (23%)
Query: 9 APGPAPGPAGPPPPAAP--TSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGP 66
A PAPG A PPPP P S APP A + P L
Sbjct: 533 AAEPAPGAAPPPPPPLPGLPSPQEAPPSA----------------------PPQAPPLPG 570
Query: 67 GGEKPPPPPAEAREPPAPPPPEPPTGL--PARTPAPQGLLSPTQVPTGLG 114
E PP PP PP PPPP PP G P P P P P LG
Sbjct: 571 SPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPDALG 620
Score = 52.8 bits (125), Expect = 7e-07
Identities = 37/95 (38%), Positives = 40/95 (42%), Gaps = 13/95 (13%)
Query: 3 AAAAGGAPGPAPGPAGPPP--PAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGR 60
A AA APG AP P P P P+ + APPQA G A
Sbjct: 531 APAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPL---------- 580
Query: 61 PPSLGPGGEKPPPPP-AEAREPPAPPPPEPPTGLP 94
P L P PPPPP + PP PPPP PP G P
Sbjct: 581 PGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGP 615
Score = 41.6 bits (96), Expect = 0.002
Identities = 29/93 (31%), Positives = 29/93 (31%), Gaps = 27/93 (29%)
Query: 4 AAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPS 63
A P P P P PP AP PP PP
Sbjct: 557 APPSAPPQAPPLPGSPEPPPAPPLPGDLPPPP----------------------PPPPPP 594
Query: 64 LGPGGEKPPPPPAEAREPPAPPPPEPPTGLPAR 96
G G PPPPP PP PPP PP L R
Sbjct: 595 PGTDGPVPPPPP-----PPPPPPGGPPDALGRR 622
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/125 (30%), Positives = 51/125 (40%), Gaps = 26/125 (20%)
Query: 4 AAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNN----ISLDG 59
+ A GA P P PPAAPT P AL + + + + L +S++
Sbjct: 450 STAMGASRRPPEPE-KAPPAAPTR-----PSALELKVEELEEKGLIRILRGPGDAVSIEI 503
Query: 60 RPPSLGP--GGEKPPP------------PPAEAREPPAPPPPEPPTGLPARTPAPQGLLS 105
P ++ GG+ P P P AE APPPP P GLP+ AP +
Sbjct: 504 LPVAVATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPS--A 561
Query: 106 PTQVP 110
P Q P
Sbjct: 562 PPQAP 566
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 54.3 bits (129), Expect = 2e-07
Identities = 41/121 (33%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 3 AAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNN-ISLDGRP 61
AA A G PPPPA PT + P R++ + +S G P
Sbjct: 103 AAGMASALEALEGGGPPPPPALPTWSVPNGPSPEEVEQQKRQQPGPSEHIERRVSNAGGP 162
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPPE--PPTGLPART------PAPQGLLSPTQVPTGL 113
P+ GG PPP P PP PPPP PP+G+PA P P L Q P G
Sbjct: 163 PAPPAGGPPPPPGPPP---PPGPPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQGPGGG 219
Query: 114 G 114
G
Sbjct: 220 G 220
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 54.3 bits (129), Expect = 2e-07
Identities = 46/124 (37%), Positives = 48/124 (38%), Gaps = 23/124 (18%)
Query: 10 PGPAPGPAGPPP------PAAPTSAARAPPQA----LRRRGDSRRRQAALFFLNNISLDG 59
P P P P GPPP P PT PP LR G R L G
Sbjct: 406 PMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPG 465
Query: 60 RPPSLGPG---GEKPPPPPA---EAREPPAPP---PPEP----PTGLPARTPAPQGLLSP 106
RPP PG G P PPP PPAPP PP P P +P PAP GL P
Sbjct: 466 RPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPP 525
Query: 107 TQVP 110
+P
Sbjct: 526 APLP 529
Score = 40.8 bits (94), Expect = 0.003
Identities = 29/89 (32%), Positives = 31/89 (34%), Gaps = 30/89 (33%)
Query: 20 PPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGEKPPPPPAEAR 79
PP + P S +APP PP LGP PP PP
Sbjct: 393 PPQSVPPSQIQAPPMP------------------------GPPPLGP----PPAPPLRPP 424
Query: 80 EPPAPPPPEPPTGLP--ARTPAPQGLLSP 106
PP PP PP G P R P GL P
Sbjct: 425 GPPTGLPPGPPPGAPPFLRPPGMPGLRGP 453
Score = 39.7 bits (91), Expect = 0.006
Identities = 29/64 (45%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 61 PPSLGPGGEKPPPPPAEAREPPAPP--PPEPPTGLPARTPAPQGLLSPTQVPTGL-GLDG 117
PPS P PPP PPAPP PP PPTGLP P P P P G+ GL G
Sbjct: 398 PPSQIQAPPMPGPPPLGP--PPAPPLRPPGPPTGLP---PGPPPGAPPFLRPPGMPGLRG 452
Query: 118 QRQR 121
R
Sbjct: 453 PLPR 456
Score = 31.6 bits (70), Expect = 1.7
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 10/48 (20%)
Query: 69 EKPPP---PPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGL 113
++ PP PP++ + PP P PP P G P PAP L P PTGL
Sbjct: 390 QQAPPQSVPPSQIQAPPMPGPP--PLGPP---PAPP--LRPPGPPTGL 430
Score = 30.0 bits (66), Expect = 4.8
Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 21/75 (28%)
Query: 14 PGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGEKPPP 73
P P PP ++A PP R ++ L + PP G KPP
Sbjct: 157 PLPGAQPPSILKKTSAYGPPT----------RAVSILPLLGHGVPRLPP-----GRKPPG 201
Query: 74 PPAEAREPPAPPPPE 88
PP P PPPP+
Sbjct: 202 PP------PGPPPPQ 210
Score = 29.6 bits (65), Expect = 6.3
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPPEPP 90
P LG G + PP R+PP PPP PP
Sbjct: 184 PLLGHGVPRLPP----GRKPPGPPPGPPP 208
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 53.5 bits (127), Expect = 4e-07
Identities = 46/131 (35%), Positives = 50/131 (38%), Gaps = 29/131 (22%)
Query: 3 AAAAGGAPGPAPGPA---GPPPPAAPTSA--------------ARAPPQALRRRGDSRRR 45
AA AG PGP PGP GP PA P +A A AP +L G
Sbjct: 167 AARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGP---- 222
Query: 46 QAALFFLNNISLDGR----PPSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQ 101
AAL L + G PP +G PP PA P AP P P P PAP
Sbjct: 223 -AALLPLPKPAAPGTVIQTPPFVGAAA---PPAPAAPSPPAAPAPAAPAAAPPPPPPAPA 278
Query: 102 GLLSPTQVPTG 112
L P P G
Sbjct: 279 TLARPPGHPAG 289
Score = 47.8 bits (112), Expect = 2e-05
Identities = 41/117 (35%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Query: 5 AAGGAPGPAP---GPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRP 61
+AG AP PAP GPAG P +AA AP ++ R QAA ++ G P
Sbjct: 308 SAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASG-P 366
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPPEP--PTGLP--ARTPAPQGL-LSPTQVPTGL 113
S P P A PPP P PTGLP A Q L +PT +G+
Sbjct: 367 ASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGI 423
Score = 38.5 bits (88), Expect = 0.014
Identities = 39/124 (31%), Positives = 45/124 (36%), Gaps = 20/124 (16%)
Query: 2 AAAAAGGAPGPAPGPAGP-----PP--PAAPTSAARA-PPQALRRRGDSRRRQAALFFLN 53
A A A A P P P P PP PA P +AA A PP A + G S A
Sbjct: 260 APAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPA----- 314
Query: 54 NISLDGRPPSLGPGGEKPPPPPAEAREPPAP--PPPEPPTGLPARTPAPQGLLSPTQVPT 111
P + GP G P P A PAP P + A PA Q L + T
Sbjct: 315 -----PAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPAST 369
Query: 112 GLGL 115
+
Sbjct: 370 AASM 373
Score = 37.4 bits (85), Expect = 0.030
Identities = 38/103 (36%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
Query: 3 AAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPP 62
AA A GAPG AP PPPA PQ R S RR + RPP
Sbjct: 76 AAPAEGAPGAAP----EPPPAGRARPGGGGPQ--RPGPPSPRRPLVPAGPAPPAAKLRPP 129
Query: 63 SLGPGGEKPPPPPA---EAREPPAPPPPEPPTGLPARTPAPQG 102
G G P P A A PAP P P G PA A G
Sbjct: 130 PEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAG-PAALAARAG 171
Score = 36.6 bits (83), Expect = 0.052
Identities = 43/123 (34%), Positives = 47/123 (38%), Gaps = 31/123 (25%)
Query: 3 AAAAG--------GAPGPAPGPAGPPPPA--APTSAARAPPQALRRRGDSRRRQAALFFL 52
AAAAG G+P A G AGP PA AP AA PP A R R
Sbjct: 52 AAAAGALGNHVVSGSPAGAAG-AGPAAPAEGAP-GAAPEPPPAGRARPGG---------- 99
Query: 53 NNISLDGRPPSLGPGGEKPPPPPAEAREPPAP--PPPEPPTGLPARTPAPQGLLS-PTQV 109
G P GP + P PA P A PPPE G A PA + + P
Sbjct: 100 ------GGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPA 153
Query: 110 PTG 112
P G
Sbjct: 154 PAG 156
Score = 32.0 bits (71), Expect = 1.3
Identities = 26/79 (32%), Positives = 29/79 (36%), Gaps = 18/79 (22%)
Query: 45 RQAALFFLNNISLDGRP----------PSLGPGGEKPPPPPAEAREP-------PAPPPP 87
R AA L N + G P P+ G G P PPPA P P PP P
Sbjct: 51 RAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSP 110
Query: 88 EPPTGLPARTPAPQGLLSP 106
P +PA P L P
Sbjct: 111 RRPL-VPAGPAPPAAKLRP 128
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 53.1 bits (126), Expect = 5e-07
Identities = 42/125 (33%), Positives = 44/125 (35%), Gaps = 23/125 (18%)
Query: 3 AAAAGGAPGPAPG---PAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDG 59
A G PGP PG P PPPP P PP + F
Sbjct: 303 APPLGSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVG------------FGSPGTPPPP 350
Query: 60 RPPSLGP----GGEKPPPPPAEAREPPAPPPP--EPPTGLPARTPAPQGLLSPTQVPTGL 113
PPS P PPPPP A P PPPP +P G P P P P P
Sbjct: 351 SPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPPP--PPFT 408
Query: 114 GLDGQ 118
G DGQ
Sbjct: 409 GADGQ 413
Score = 45.8 bits (107), Expect = 8e-05
Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 2/107 (1%)
Query: 5 AAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQA-ALFFLNNISLDGRPPS 63
A+ P P A P P+ PP D++R A +++ PP
Sbjct: 243 ASSYPPPPQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPPP 302
Query: 64 LGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVP 110
P G P P P A P PPPP P G+P P P G SP P
Sbjct: 303 APPLGSPPGPKPGFAPPPAPPPPPPPMIGIPP-PPPPVGFGSPGTPP 348
Score = 44.7 bits (104), Expect = 2e-04
Identities = 35/106 (33%), Positives = 41/106 (38%), Gaps = 17/106 (16%)
Query: 8 GAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPG 67
G+PG P P+ P P P AA PP AA + PP P
Sbjct: 342 GSPGTPPPPSPPSFPPHPDFAAPPPPPP---------PPAA-----DYPTLPPPPLSQPT 387
Query: 68 GEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGL 113
G PPPPP PP PPP P TG + P L T+ + L
Sbjct: 388 GGAPPPPPP---PPPPGPPPPPFTGADGQPAIPPPLSDTTKPKSSL 430
Score = 43.1 bits (100), Expect = 6e-04
Identities = 35/114 (30%), Positives = 37/114 (32%), Gaps = 40/114 (35%)
Query: 10 PGPAP---GPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGP 66
P PAP P GP P AP A PP PP +G
Sbjct: 300 PPPAPPLGSPPGPKPGFAPPPAPPPPP---------------------------PPMIGI 332
Query: 67 GGEKPPPPPAEAREPPAPPPPEPPT-------GLPARTPAPQGLLSPTQVPTGL 113
PPPPP P PPPP PP+ P P P PT P L
Sbjct: 333 ---PPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTLPPPPL 383
Score = 31.2 bits (69), Expect = 2.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 7 GGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAAL 49
GGAP P P P P PP P + A P D+ + +++L
Sbjct: 388 GGAPPPPPPPPPPGPPPPPFTGADGQPAIPPPLSDTTKPKSSL 430
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 53.1 bits (126), Expect = 5e-07
Identities = 34/114 (29%), Positives = 41/114 (35%), Gaps = 25/114 (21%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P PG PPPP P + PP L + + PP G G
Sbjct: 1121 PPPLPGAGIPPPPPLPGAGIPPPPP-----------------LPRVGIPPPPPLPGAGIP 1163
Query: 70 KPPPPPAEAREPPAP--------PPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PPP P PP P PPP P G+P P P + P G+G+
Sbjct: 1164 PPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGMGI 1217
Score = 52.4 bits (124), Expect = 9e-07
Identities = 35/106 (33%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P PG A PPPP P + PP L + PP PG
Sbjct: 945 PPPLPGAAIPPPPPLPGAGIPLPPP-----------------LPGAGIPPPPPL--PGAG 985
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PPPPP P PPPP P G+P P P + P G G+
Sbjct: 986 IPPPPPLPGAGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1030
Score = 52.0 bits (123), Expect = 1e-06
Identities = 36/106 (33%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P PG PPPP P A PP L G PP PG
Sbjct: 1022 PPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIP------------------PPPPLPGAG 1062
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PPPPP P PPPP P G+P P P + P G+G+
Sbjct: 1063 IPPPPPLPGAGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGI 1107
Score = 51.2 bits (121), Expect = 2e-06
Identities = 36/106 (33%), Positives = 39/106 (36%), Gaps = 20/106 (18%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P PG PPPP P A PP L G PP PG
Sbjct: 967 PPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIP------------------PPPPLPGAG 1007
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PPPPP P PPPP P G+P P P + P G G+
Sbjct: 1008 IPPPPPLPGAGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1052
Score = 51.2 bits (121), Expect = 2e-06
Identities = 36/106 (33%), Positives = 39/106 (36%), Gaps = 20/106 (18%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P PG PPPP P A PP L G PP PG
Sbjct: 978 PPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIP------------------PPPPLPGAG 1018
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PPPPP P PPPP P G+P P P + P G G+
Sbjct: 1019 IPPPPPLPGAGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1063
Score = 51.2 bits (121), Expect = 2e-06
Identities = 36/106 (33%), Positives = 39/106 (36%), Gaps = 20/106 (18%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P PG PPPP P A PP L G PP PG
Sbjct: 989 PPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIP------------------PPPPLPGAG 1029
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PPPPP P PPPP P G+P P P + P G G+
Sbjct: 1030 IPPPPPLPGAGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1074
Score = 51.2 bits (121), Expect = 2e-06
Identities = 36/106 (33%), Positives = 39/106 (36%), Gaps = 20/106 (18%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P PG PPPP P A PP L G PP PG
Sbjct: 1044 PPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIP------------------PPPPLPGAG 1084
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PPPPP P PPPP P G+P P P + P G G+
Sbjct: 1085 IPPPPPLPGAGIP-PPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGI 1129
Score = 50.4 bits (119), Expect = 3e-06
Identities = 36/106 (33%), Positives = 39/106 (36%), Gaps = 20/106 (18%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P PG PPPP P A PP L G PP PG
Sbjct: 1055 PPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIP------------------PPPPLPGAG 1095
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PPPPP P PPPP P G+P P P + P G G+
Sbjct: 1096 IPPPPPLPGVGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI 1140
Score = 50.4 bits (119), Expect = 3e-06
Identities = 36/106 (33%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P PG PPPP P A PP L G PP PG
Sbjct: 1099 PPPLPGVGIPPPPPLP-GAGIPPPPPLPGAGIP------------------PPPPLPGAG 1139
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PPPPP P PPPP P G+P P P + P G+G+
Sbjct: 1140 IPPPPPLPRVGIP-PPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGI 1184
Score = 50.1 bits (118), Expect = 5e-06
Identities = 38/109 (34%), Positives = 44/109 (40%), Gaps = 9/109 (8%)
Query: 8 GAPGPAPGP-AGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGP 66
G P P P P AG PPP A PP L G L + + PP P
Sbjct: 1062 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP-----LPGVGIPPPPPL--P 1114
Query: 67 GGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
G PPPPP P PPPP P G+P P P+ + P G G+
Sbjct: 1115 GAGIPPPPPLPGAGIP-PPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGI 1162
Score = 48.5 bits (114), Expect = 1e-05
Identities = 37/109 (33%), Positives = 40/109 (36%), Gaps = 20/109 (18%)
Query: 8 GAPGPAPGP-AGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGP 66
G P P P P AG PPP A PP L G PP P
Sbjct: 1029 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP------------------PPPPLP 1070
Query: 67 GGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
G PPPPP P PPPP P G+P P P + P G G+
Sbjct: 1071 GAGIPPPPPLPGAGIP-PPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGI 1118
Score = 48.1 bits (113), Expect = 2e-05
Identities = 36/109 (33%), Positives = 39/109 (35%), Gaps = 20/109 (18%)
Query: 8 GAPGPAPGP-AGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGP 66
G P P P P AG PPP PP L G PP P
Sbjct: 1084 GIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIP------------------PPPPLP 1125
Query: 67 GGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
G PPPPP P PPPP P G+P P P + P G G+
Sbjct: 1126 GAGIPPPPPLPGAGIP-PPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGI 1173
Score = 48.1 bits (113), Expect = 2e-05
Identities = 33/102 (32%), Positives = 37/102 (36%), Gaps = 20/102 (19%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P PG PPPP P PP L + + PP PG
Sbjct: 1165 PPPLPGAGIPPPPPLPGVGIPPPPP-----------------LPGVGIPPPPPL--PGAG 1205
Query: 70 KPPPPPAEARE-PPAPPPPEPPTGLPARTPAPQGLLSPTQVP 110
PPPPP PPAP PP PP G P + P +P
Sbjct: 1206 IPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLLP 1247
Score = 45.4 bits (106), Expect = 1e-04
Identities = 35/104 (33%), Positives = 37/104 (35%), Gaps = 20/104 (19%)
Query: 8 GAPGPAPGP-AGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGP 66
G P P P P G PPP A PP L G PP P
Sbjct: 1139 GIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIP------------------PPPPLP 1180
Query: 67 GGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVP 110
G PPPPP P PPPP P G+P P P + P P
Sbjct: 1181 GVGIPPPPPLPGVGIP-PPPPLPGAGIPPPPPLPGMGIPPAPAP 1223
Score = 41.2 bits (95), Expect = 0.002
Identities = 31/109 (28%), Positives = 37/109 (33%), Gaps = 18/109 (16%)
Query: 7 GGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGP 66
G P P P G P P++A PP L + PP P
Sbjct: 874 GMVPPPPPPLPGMTVPTLPSTAIPQPPP-----------------LQGTEMLPPPPPPLP 916
Query: 67 GGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
G PPPPP P PP P G+P P P + P G G+
Sbjct: 917 GAGIPPPPPLPGAGI-LPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGI 964
Score = 40.4 bits (93), Expect = 0.004
Identities = 33/106 (31%), Positives = 37/106 (34%), Gaps = 18/106 (16%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P G PPP P A PP L + PP G G
Sbjct: 899 PPPLQGTEMLPPPPPPLPGAGIPPPPP---------------LPGAGILPLPPLPG-AGI 942
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PPPP A P PPPP P G+P P P + P G G+
Sbjct: 943 PPPPPLPGAAIP--PPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGI 986
Score = 39.3 bits (90), Expect = 0.008
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 35/132 (26%)
Query: 19 PPPPAAPTSAARA-----PPQALRRRGD-SRRRQAALFFLNNISLDGRPP-------SLG 65
PPPP+ SA + PP ++ S + F N+ ++ PP S
Sbjct: 811 PPPPSLLWSAGQGQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSM 870
Query: 66 PG-GEKPPPPP-------------AEAREPPA--------PPPPEPPTGLPARTPAPQGL 103
PG G PPPPP A + PP PPPP P G+P P P
Sbjct: 871 PGLGMVPPPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAG 930
Query: 104 LSPTQVPTGLGL 115
+ P G G+
Sbjct: 931 ILPLPPLPGAGI 942
Score = 35.8 bits (81), Expect = 0.088
Identities = 28/100 (28%), Positives = 33/100 (33%), Gaps = 22/100 (22%)
Query: 12 PAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGEKP 71
P G PPPP P P ++ PP G P
Sbjct: 871 PGLGMVPPPPPPLPGMTVPTLPST--------------------AIPQPPPLQGTEMLPP 910
Query: 72 PPPPAEAREPPAPPPPEPPTGLPARTPAP-QGLLSPTQVP 110
PPPP P PPPP P G+ P P G+ P +P
Sbjct: 911 PPPPLPGAGIP-PPPPLPGAGILPLPPLPGAGIPPPPPLP 949
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 52.8 bits (125), Expect = 7e-07
Identities = 39/111 (35%), Positives = 44/111 (39%), Gaps = 18/111 (16%)
Query: 8 GAPGPAPGPAG---PPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSL 64
G P P+ P G PPPP P SA R PP G + + PP L
Sbjct: 653 GIPSPSSLPGGTAIPPPPPLPGSA-RIPPPPPPLPGSA-------------GIPPPPPPL 698
Query: 65 GPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PG PPPP P PPP P G P P P G+ P P G G+
Sbjct: 699 -PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGV 748
Score = 44.7 bits (104), Expect = 2e-04
Identities = 42/134 (31%), Positives = 50/134 (37%), Gaps = 31/134 (23%)
Query: 5 AAGGAPGPAPGPAGPP-------------PPAAPTSAARAPPQALRRRGDSRRRQAALFF 51
A G + P P P PP PP+ P A +PP L GD+
Sbjct: 592 APGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPL--SGDATIPPPPP-L 648
Query: 52 LNNISLDGRPPSLGPGG---EKPPPPPAEAREPPAPPP-------PEPPTGLPARTPAPQ 101
+ + PS PGG PPP P AR PP PPP P PP LP P
Sbjct: 649 PEGVGIPS--PSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPP 706
Query: 102 GLLSPTQVPTGLGL 115
P +P G G+
Sbjct: 707 ---PPPPLPGGPGI 717
Score = 44.3 bits (103), Expect = 2e-04
Identities = 35/108 (32%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P PAPG + PPP P PP L + + PPSL PGG
Sbjct: 589 PPPAPGDSTTPPPPPPPPP---PPPPLP---------------GGVCISS-PPSL-PGGT 628
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGLDG 117
PPP + + PPPP P G+ P+P L T +P L G
Sbjct: 629 AISPPPPLSGDATIPPPPPLPEGVGI--PSPSSLPGGTAIPPPPPLPG 674
Score = 42.7 bits (99), Expect = 7e-04
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 61 PPSLGPGGEKPPPPPA--EAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PP G G PPPPA ++ PP PPPP PP P P + SP +P G +
Sbjct: 577 PPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPP---PPPLPGGVCISSPPSLPGGTAI 630
Score = 39.3 bits (90), Expect = 0.008
Identities = 37/131 (28%), Positives = 45/131 (34%), Gaps = 48/131 (36%)
Query: 1 MAAAAAGGAPG-PAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDG 59
++AAA P P+ P P PP S PP
Sbjct: 556 LSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPP-------------------------- 589
Query: 60 RPPSLGPGGEKPPPPPAEAREPPAPPPPEP-------PTGLPART----PAPQG----LL 104
PP+ G PPPPP PP PPPP P P LP T P P +
Sbjct: 590 -PPAPGDSTTPPPPPP-----PPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIP 643
Query: 105 SPTQVPTGLGL 115
P +P G+G+
Sbjct: 644 PPPPLPEGVGI 654
Score = 31.6 bits (70), Expect = 1.7
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 34/85 (40%)
Query: 6 AGGAPGPAP---GPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPP 62
AG P P P GP PPPP P PP PP
Sbjct: 702 AGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP---------------------------PP 734
Query: 63 SLGPGGEKPPPPPAEAREPPAPPPP 87
+G PPPPP P AP P
Sbjct: 735 GMG----MPPPPPFGFGVPAAPVLP 755
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 52.8 bits (125), Expect = 7e-07
Identities = 39/111 (35%), Positives = 44/111 (39%), Gaps = 18/111 (16%)
Query: 8 GAPGPAPGPAG---PPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSL 64
G P P+ P G PPPP P SA R PP G + + PP L
Sbjct: 662 GIPSPSSLPGGTAIPPPPPLPGSA-RIPPPPPPLPGSA-------------GIPPPPPPL 707
Query: 65 GPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PG PPPP P PPP P G P P P G+ P P G G+
Sbjct: 708 -PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGV 757
Score = 44.7 bits (104), Expect = 2e-04
Identities = 42/134 (31%), Positives = 50/134 (37%), Gaps = 31/134 (23%)
Query: 5 AAGGAPGPAPGPAGPP-------------PPAAPTSAARAPPQALRRRGDSRRRQAALFF 51
A G + P P P PP PP+ P A +PP L GD+
Sbjct: 601 APGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPL--SGDATIPPPPP-L 657
Query: 52 LNNISLDGRPPSLGPGG---EKPPPPPAEAREPPAPPP-------PEPPTGLPARTPAPQ 101
+ + PS PGG PPP P AR PP PPP P PP LP P
Sbjct: 658 PEGVGIPS--PSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPP 715
Query: 102 GLLSPTQVPTGLGL 115
P +P G G+
Sbjct: 716 ---PPPPLPGGPGI 726
Score = 44.3 bits (103), Expect = 2e-04
Identities = 35/108 (32%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P PAPG + PPP P PP L + + PPSL PGG
Sbjct: 598 PPPAPGDSTTPPPPPPPPP---PPPPLP---------------GGVCISS-PPSL-PGGT 637
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGLDG 117
PPP + + PPPP P G+ P+P L T +P L G
Sbjct: 638 AISPPPPLSGDATIPPPPPLPEGVGI--PSPSSLPGGTAIPPPPPLPG 683
Score = 42.7 bits (99), Expect = 7e-04
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 61 PPSLGPGGEKPPPPPA--EAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGL 115
PP G G PPPPA ++ PP PPPP PP P P + SP +P G +
Sbjct: 586 PPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPP---PPPLPGGVCISSPPSLPGGTAI 639
Score = 39.3 bits (90), Expect = 0.008
Identities = 37/131 (28%), Positives = 45/131 (34%), Gaps = 48/131 (36%)
Query: 1 MAAAAAGGAPG-PAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDG 59
++AAA P P+ P P PP S PP
Sbjct: 565 LSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPP-------------------------- 598
Query: 60 RPPSLGPGGEKPPPPPAEAREPPAPPPPEP-------PTGLPART----PAPQG----LL 104
PP+ G PPPPP PP PPPP P P LP T P P +
Sbjct: 599 -PPAPGDSTTPPPPPP-----PPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIP 652
Query: 105 SPTQVPTGLGL 115
P +P G+G+
Sbjct: 653 PPPPLPEGVGI 663
Score = 31.6 bits (70), Expect = 1.7
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 34/85 (40%)
Query: 6 AGGAPGPAP---GPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPP 62
AG P P P GP PPPP P PP PP
Sbjct: 711 AGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP---------------------------PP 743
Query: 63 SLGPGGEKPPPPPAEAREPPAPPPP 87
+G PPPPP P AP P
Sbjct: 744 GMG----MPPPPPFGFGVPAAPVLP 764
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 52.8 bits (125), Expect = 7e-07
Identities = 36/106 (33%), Positives = 37/106 (34%), Gaps = 31/106 (29%)
Query: 8 GAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPG 67
G P P P GPPPP PP PP+ G
Sbjct: 348 GIAPPPPTPRGPPPPGR---GGPPPPP--------------------------PPATGRS 378
Query: 68 GEKPPPPPAEAREP-PAPPPPEPPTGLPARTPAPQGLLSPTQVPTG 112
G PPPPP P P PPPP PP PAP L P VP G
Sbjct: 379 GPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP-LPPALVPAG 423
Score = 33.5 bits (75), Expect = 0.44
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAP-PQALRRRG---DSRRRQAALFFL-NNISLDGR 60
AGG P P P P PPPP++ A P P AL G R A L + I L+
Sbjct: 388 AGGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGGRGALLDQIRQGIQLNKT 447
Query: 61 PPSLGPGGEKPPPPPAE 77
P + +PPP +E
Sbjct: 448 PGAPESSALQPPPQSSE 464
>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
isoform B' [Homo sapiens]
Length = 240
Score = 52.4 bits (124), Expect = 9e-07
Identities = 42/133 (31%), Positives = 47/133 (35%), Gaps = 16/133 (12%)
Query: 1 MAAAAAGGAPGPAPG---PAGPPPPAAPTSAAR-----APPQALRRRGDSRRRQAALFFL 52
+A AA G G A G PAG P P AP A P R AA
Sbjct: 97 LAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAA 156
Query: 53 NNISLDGRPPSLGPGGEKPPPPPAEAREPPAP--------PPPEPPTGLPARTPAPQGLL 104
S+ G P PG PPPP PP PP PP G+P P G+
Sbjct: 157 ATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMP 216
Query: 105 SPTQVPTGLGLDG 117
P P G+ G
Sbjct: 217 PPGMRPPPPGMRG 229
Score = 43.5 bits (101), Expect = 4e-04
Identities = 32/97 (32%), Positives = 36/97 (37%), Gaps = 22/97 (22%)
Query: 2 AAAAAGGAPGP-APGPAGPPPP---AAPTSAARAPPQALRR-----RGDSRRRQAALFFL 52
A A+ GAP PG GPPPP AP PP +R G R
Sbjct: 157 ATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGR------- 209
Query: 53 NNISLDGRPPSLGPGGEKPPPPPAEAREPPAPPPPEP 89
G P + P G +PPPP PP PP P
Sbjct: 210 ------GTPMGMPPPGMRPPPPGMRGPPPPGMRPPRP 240
>gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isoform
B [Homo sapiens]
Length = 231
Score = 52.4 bits (124), Expect = 9e-07
Identities = 42/133 (31%), Positives = 47/133 (35%), Gaps = 16/133 (12%)
Query: 1 MAAAAAGGAPGPAPG---PAGPPPPAAPTSAAR-----APPQALRRRGDSRRRQAALFFL 52
+A AA G G A G PAG P P AP A P R AA
Sbjct: 97 LAGAAGGPGIGRAAGRGIPAGVPMPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAAA 156
Query: 53 NNISLDGRPPSLGPGGEKPPPPPAEAREPPAP--------PPPEPPTGLPARTPAPQGLL 104
S+ G P PG PPPP PP PP PP G+P P G+
Sbjct: 157 ATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMP 216
Query: 105 SPTQVPTGLGLDG 117
P P G+ G
Sbjct: 217 PPGMRPPPPGMRG 229
Score = 32.3 bits (72), Expect = 0.97
Identities = 30/104 (28%), Positives = 35/104 (33%), Gaps = 30/104 (28%)
Query: 2 AAAAAGGAPGP-APGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGR 60
A A+ GAP PG GPPPP APP + G
Sbjct: 157 ATASIAGAPTQYPPGRGGPPPPMG----RGAPPPGMM---------------------GP 191
Query: 61 PPSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLL 104
PP + P P PP P PP G+ P +GLL
Sbjct: 192 PPGMRP----PMGPPMGIPPGRGTPMGMPPPGMRPPPPGMRGLL 231
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 52.0 bits (123), Expect = 1e-06
Identities = 41/112 (36%), Positives = 45/112 (40%), Gaps = 22/112 (19%)
Query: 7 GGAPGPAPG----PAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPP 62
G GP P P GPPPP P PPQ GD R S G+P
Sbjct: 55 GKPQGPPPQGGNKPQGPPPPGKPQGP---PPQ-----GDKSRSPR--------SPPGKPQ 98
Query: 63 SLGPGGEKPP-PPPAEAREPPAPPPPEPPTGLPARTPA-PQGLLSPTQVPTG 112
P G KP PPP +P PPPP P G PA+ + Q SP P G
Sbjct: 99 GPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQG 150
Score = 43.1 bits (100), Expect = 6e-04
Identities = 36/118 (30%), Positives = 43/118 (36%), Gaps = 38/118 (32%)
Query: 7 GGAP-GPAPG----PAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRP 61
GG P GP P P GPPPP P + PP +G S+ + A
Sbjct: 104 GGKPQGPPPQGGNKPQGPPPPGKP----QGPPA----QGGSKSQSAR------------- 142
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPP---------EPPTGLPARTPAPQGLLSPTQVP 110
P G+ PP E P PPPP PP G P P P P++ P
Sbjct: 143 ---SPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 197
Score = 38.1 bits (87), Expect = 0.018
Identities = 20/54 (37%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 59 GRPPSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTG 112
G PP P G+ PPP +P PPPP P G P + + SP P G
Sbjct: 49 GPPP---PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQG 99
Score = 30.0 bits (66), Expect = 4.8
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVP 110
PSL G + P P + PPPP P G P PQG P P
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPPPGKPQG-----PPPQGGNKPQGPP 72
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 52.0 bits (123), Expect = 1e-06
Identities = 37/114 (32%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAA-LFFLNNISLDGRPPSL 64
A P P GPA PPP APT A PP + A + S G P +
Sbjct: 1245 AATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATS 1304
Query: 65 GPGGEKPPP---PPAEAREPPAPPPPEPPTGLPARTPAPQGLLS-PTQVPTGLG 114
P G PP PP+ P PPP PT P+P+G + P P+ G
Sbjct: 1305 PPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKG 1358
Score = 50.4 bits (119), Expect = 3e-06
Identities = 37/101 (36%), Positives = 40/101 (39%), Gaps = 9/101 (8%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
A P P GPA P P APT A PP + A PPS
Sbjct: 944 AATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAP------TPPAATPPS-- 995
Query: 66 PGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSP 106
P G P P A PPA PP P G PA TP P+G +P
Sbjct: 996 PKGGPATPSPKGAPTPPAVTPPS-PKGSPAATPFPKGASTP 1035
Score = 49.3 bits (116), Expect = 8e-06
Identities = 35/101 (34%), Positives = 39/101 (38%), Gaps = 16/101 (15%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
A P P GPA P P APT A PP + A PP++
Sbjct: 967 AATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAP-----------TPPAVT 1015
Query: 66 P----GGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQG 102
P G P P A PPA PP P G PA TP P+G
Sbjct: 1016 PPSPKGSPAATPFPKGASTPPAATPPS-PKGSPAATPLPKG 1055
Score = 46.6 bits (109), Expect = 5e-05
Identities = 37/104 (35%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
A P P PA P P APT A PP + A PPS
Sbjct: 921 ARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAP------TPPAATPPS-- 972
Query: 66 PGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQV 109
P G P P A PPA PP P G PA TP+P+G +P V
Sbjct: 973 PKGGPATPSPKGAPTPPAATPPSPKGG-PA-TPSPKGAPTPPAV 1014
Score = 45.8 bits (107), Expect = 8e-05
Identities = 34/97 (35%), Positives = 37/97 (38%), Gaps = 10/97 (10%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
A P P GPA P P AP A PP + A + PPS
Sbjct: 1084 AATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAP------TTPAATPPS-- 1135
Query: 66 PGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQG 102
P G PPP A PA PP P GL TP P+G
Sbjct: 1136 PKGGLATPPPKGAPTTPAATPPSPKGGL--ATPPPKG 1170
Score = 45.1 bits (105), Expect = 1e-04
Identities = 34/97 (35%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
A P P G A PPP APT+ A PP + A + PPS
Sbjct: 1130 AATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAP------TTPAATPPS-- 1181
Query: 66 PGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQG 102
P G P P A PA PP P GL TP+P+G
Sbjct: 1182 PKGGLATPSPKGAPTTPAATPPSPKGGL--ATPSPKG 1216
Score = 43.1 bits (100), Expect = 6e-04
Identities = 35/104 (33%), Positives = 40/104 (38%), Gaps = 10/104 (9%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
A P P G A P P APT+ A PP + A + PPS
Sbjct: 1199 AATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAP------TTPAATPPS-- 1250
Query: 66 PGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQV 109
P G PPP A PPA PP GL TP +G +P V
Sbjct: 1251 PKGGPATPPPKGAPTPPAATPPSLKGGL--ATPPHKGAPNPAVV 1292
Score = 41.2 bits (95), Expect = 0.002
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P GPA P P PTS A P + R+ A D PP++ P
Sbjct: 1387 PSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGA---ATPSKGDLTPPAVTPVSL 1443
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPART-PAPQGLLSPTQVPT 111
K P + + PA P + LPA T P+P+ +P QV T
Sbjct: 1444 KKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVAT 1486
Score = 40.8 bits (94), Expect = 0.003
Identities = 33/97 (34%), Positives = 36/97 (37%), Gaps = 10/97 (10%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
A P P GPA P APT A PP + A + PPS
Sbjct: 1061 AATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPM------PPAATPPS-- 1112
Query: 66 PGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQG 102
P G PP A PA PP P GL TP P+G
Sbjct: 1113 PKGGLATPPHKGAPTTPAATPPSPKGGL--ATPPPKG 1147
Score = 40.0 bits (92), Expect = 0.005
Identities = 35/109 (32%), Positives = 43/109 (39%), Gaps = 17/109 (15%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
A P P P PPP APT A PP + S G P +
Sbjct: 1314 AATPPSPKGSPGTPPPKGAPTPPAVTPPSP---------KGTPTLPATTPSSKGGPTT-- 1362
Query: 66 PGGEKPPPPPAEA---REPPAPPPPEPPTGLPARTPAPQG-LLSPTQVP 110
P ++ P PPA + PA PP P G PA P+P+G SP +P
Sbjct: 1363 PSSKEGPTPPAATPSHKGGPAMTPPSPKRG-PA-IPSPKGDPTSPAVIP 1409
Score = 40.0 bits (92), Expect = 0.005
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 10 PGPAPGPAGPPP---PAAPTSAARAPPQALRR---RGDSRRRQAALFFLNNISLDGRPPS 63
P P PA P P PA P+S + P A+ +G ++ + PP+
Sbjct: 1556 PSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLI-----------PPA 1604
Query: 64 LGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGL-LSPTQVPTGL 113
+ P P EA PPA PP P G PA TPAP+G SP P+ L
Sbjct: 1605 V------TSPSPKEAPTPPAVTPPSPEKG-PA-TPAPKGTPTSPPVTPSSL 1647
Score = 39.3 bits (90), Expect = 0.008
Identities = 30/108 (27%), Positives = 35/108 (32%), Gaps = 25/108 (23%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P GPA PP APT A PP S G P + P G
Sbjct: 1295 PSPKGGPATSPPKGAPTPPAATPP----------------------SPKGSPGTPPPKGA 1332
Query: 70 KPPP---PPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLG 114
PP PP+ P P G P + +G P P+ G
Sbjct: 1333 PTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKG 1380
Score = 38.9 bits (89), Expect = 0.010
Identities = 37/119 (31%), Positives = 43/119 (36%), Gaps = 19/119 (15%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
A P P G A PP APT+ A PP + A + PPS
Sbjct: 1107 AATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPT------TPAATPPSPK 1160
Query: 66 PGGEKPPPPPAEAREPPAPPPPEP------PTGLP----ARTPAPQGLL---SPTQVPT 111
G PPP A PP P+ P G P A P+P+G L SP PT
Sbjct: 1161 GGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPT 1219
Score = 38.1 bits (87), Expect = 0.018
Identities = 34/109 (31%), Positives = 41/109 (37%), Gaps = 26/109 (23%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P GPA P P AP AL S ++ A + G P S P G
Sbjct: 894 PFPKEGPATPAPKQAP---------ALSMTSSSPKKARA-----TPAPKGIPASPSPKGA 939
Query: 70 KPPP---PPAEAREPPAPPP---PEPPTGLP------ARTPAPQGLLSP 106
PP PP+ P P P P PP P TP+P+G +P
Sbjct: 940 PTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTP 988
Score = 37.7 bits (86), Expect = 0.023
Identities = 30/107 (28%), Positives = 36/107 (33%), Gaps = 6/107 (5%)
Query: 6 AGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
A P P G A PPP APT+ A PP + A + PPS
Sbjct: 1153 AATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPT------TPAATPPSPK 1206
Query: 66 PGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTG 112
G P P A PP P+ P+ AP + P G
Sbjct: 1207 GGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1253
Score = 31.6 bits (70), Expect = 1.7
Identities = 36/120 (30%), Positives = 43/120 (35%), Gaps = 30/120 (25%)
Query: 8 GAPGPAPGPAGPPP-PAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGP 66
G+P P P G P PAA + + P +G A PPS P
Sbjct: 1045 GSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAAT------------PPS--P 1090
Query: 67 GGEKPPPPPAEAREPPAPPPPEP------------PTGLPARTPAPQGLLS---PTQVPT 111
G P P A PPA PP P PT A P+P+G L+ P PT
Sbjct: 1091 KGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPT 1150
Score = 31.2 bits (69), Expect = 2.2
Identities = 32/110 (29%), Positives = 45/110 (40%), Gaps = 12/110 (10%)
Query: 12 PAPGPAGPPPPAAPTSAARAP--PQALRRRGDSRRRQAA-----LFFLNNISLDGR---- 60
P PA P P APT A P P+ + SRR A L +L +
Sbjct: 1490 PKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALI 1549
Query: 61 PPSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAP-QGLLSPTQV 109
PP++ K P +E PA P + + PA TP+ +G SP ++
Sbjct: 1550 PPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKEL 1599
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 52.0 bits (123), Expect = 1e-06
Identities = 31/90 (34%), Positives = 33/90 (36%), Gaps = 21/90 (23%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P P P PPPP P A +PP + S PP P
Sbjct: 1463 PAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSS------------------PP---PPPL 1501
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPA 99
PPPPPA PP PPP P P PA
Sbjct: 1502 PPPPPPAMPSPPPPPPPAAAPLAAPPEEPA 1531
Score = 43.1 bits (100), Expect = 6e-04
Identities = 35/120 (29%), Positives = 42/120 (35%), Gaps = 27/120 (22%)
Query: 1 MAAAAAGGAPGPAPG-PAG-----PPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNN 54
+A AAA P P PG P+ P PP PP A +
Sbjct: 1424 LAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPP----------- 1472
Query: 55 ISLDGRPPSLGPGGEKPPPPPAEAREPPAPP----PPEPPTGLPARTPAPQGLLSPTQVP 110
PP P P PPP A P +PP PP PP +P+ P P +P P
Sbjct: 1473 ------PPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAP 1526
Score = 40.8 bits (94), Expect = 0.003
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 5/107 (4%)
Query: 4 AAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPS 63
A GAP P P P PPPP A L S R + ++ G
Sbjct: 827 ATRDGAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPE----ESLDPPGAMQE 882
Query: 64 LGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVP 110
L E PP P + P + P G R+P+PQG +P VP
Sbjct: 883 LLGALEPLPPAPGDTGVGPPNSEGKDPAG-AYRSPSPQGTKAPRFVP 928
Score = 38.5 bits (88), Expect = 0.014
Identities = 35/113 (30%), Positives = 38/113 (33%), Gaps = 18/113 (15%)
Query: 7 GGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDG-RPPSLG 65
GG G AGPP A PP G + S G P LG
Sbjct: 955 GGGAADDYGKAGPPEDEGDPKAGAGPPP-----GPPAYDPYGPYCPGRASGAGPETPGLG 1009
Query: 66 PGGEKPPPPPAEAREPP-----------APPPPEPPTGLPARTPAPQ-GLLSP 106
KPP P+ P APPPP PP PA P+ GL SP
Sbjct: 1010 LDPNKPPELPSTVNAEPLGLIQSGPHQAAPPPPPPPPPPPAPASEPKGGLTSP 1062
Score = 33.5 bits (75), Expect = 0.44
Identities = 34/105 (32%), Positives = 35/105 (33%), Gaps = 26/105 (24%)
Query: 5 AAGGAPGPAP-GPAGPPP----PAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDG 59
A GG GPA GPA PP P P R P S AA +
Sbjct: 209 AGGGVLGPAGLGPAQTPPYRPGPPDPPPPPRHLPTQFNLLASSSAAAAA-------AEQS 261
Query: 60 RPPSLGPGGEKPPPPPAEAREP-----------PA---PPPPEPP 90
P G P PPP E P PA PPPP PP
Sbjct: 262 SPQLYNFSGAAPGPPPPERALPRQDTVIKHYQRPASAQPPPPPPP 306
Score = 33.1 bits (74), Expect = 0.57
Identities = 26/95 (27%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
Query: 4 AAAGGAPGPAPGPAG--PPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRP 61
A+ G P P P PP + P + +P L + + ++ G
Sbjct: 155 ASFGSRPFPVPSSLSLQDPPFSPPANGLLSPHDVLHLKPSQAPTVPSSLGFERLAGGG-- 212
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPAR 96
LGP G P P PP PPP PP LP +
Sbjct: 213 -VLGPAGLGPAQTPPYRPGPPDPPP--PPRHLPTQ 244
Score = 33.1 bits (74), Expect = 0.57
Identities = 38/143 (26%), Positives = 52/143 (36%), Gaps = 38/143 (26%)
Query: 2 AAAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQ----------------ALRRRGDSRRR 45
A + +GG P P P+GPPPP T + +P Q A +G
Sbjct: 472 APSYSGGPPQP---PSGPPPPGLATCQSYSPDQLQGQLYGVQGEPYPGPAAHSQGLPTAS 528
Query: 46 QAALFFL-NNISLDGR-----PPSLGPGGEKPP--------PPPAEAREPPAPPPPEPPT 91
+ + ++ +L G P SLG GGE P PPA R P P
Sbjct: 529 PSLSYSTGHSPALSGHGGGWGPSSLGGGGEASPSHIIRPLQSPPATGRPPGVGSP----- 583
Query: 92 GLPARTPAPQGLLSPTQVPTGLG 114
G P + + +P P G G
Sbjct: 584 GAPGKYLSSVLASAPFLAPPGAG 606
Score = 32.0 bits (71), Expect = 1.3
Identities = 24/63 (38%), Positives = 24/63 (38%), Gaps = 22/63 (34%)
Query: 61 PPSLGPGGEKPP--PPPAEAREPPAPPP------------PE--------PPTGLPARTP 98
PP GP P PP A A P PPP PE PPT PA TP
Sbjct: 1408 PPLAGPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTP 1467
Query: 99 APQ 101
PQ
Sbjct: 1468 QPQ 1470
Score = 30.0 bits (66), Expect = 4.8
Identities = 27/97 (27%), Positives = 33/97 (34%), Gaps = 25/97 (25%)
Query: 19 PPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPG--GEKPPPPPA 76
PPPP S P L G + L PP L P P P P+
Sbjct: 765 PPPPPTAQSTQPTPHGLLLEAGGPDLP---------LVLPPPPPQLLPSVLSHAPSPSPS 815
Query: 77 EAR------EP--------PAPPPPEPPTGLPARTPA 99
++ EP P PPPP PP +P + A
Sbjct: 816 ASKVGVHLLEPATRDGAPQPPPPPPPPPPPMPLQLEA 852
Score = 30.0 bits (66), Expect = 4.8
Identities = 43/151 (28%), Positives = 52/151 (34%), Gaps = 42/151 (27%)
Query: 32 PPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGEKPPPPPAEAREPPAPPPPE--- 88
PP +RR G ++ +A GG PPP A A PP P PE
Sbjct: 1670 PPVPVRRSGQAKNPVSA------------------GGSSAPPPKAPA-PPPKPETPEKTT 1710
Query: 89 --------PPTGLPARTPAPQ--GLLSPTQ-------VPTG-LGLDGQRQRK-RVTSQRC 129
P T +P PAP+ LL P + V G L G+R R T
Sbjct: 1711 SEKPPEQTPETAMP-EPPAPEKPSLLRPVEKEKEKEKVTRGERPLRGERATSGRQTRPER 1769
Query: 130 SLEFLEDAVGCAPAQRTKHTSGSPRHKGLKK 160
SL + A P R P K KK
Sbjct: 1770 SLATGQPATSRLPKARPTKVKAEPPPKKRKK 1800
Score = 29.6 bits (65), Expect = 6.3
Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Query: 59 GRPPSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGLDGQ 118
G P L P PP PA +P P P P P+ G L + GLGL
Sbjct: 1302 GLTPPLSPPKSVPPSVPARGLQPQPPATPAVPHPPPSGAFGLGGALEAAE-SEGLGLGCP 1360
Query: 119 RQRKRVTSQ 127
KR+ +
Sbjct: 1361 SPCKRLDEE 1369
Score = 29.3 bits (64), Expect = 8.2
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 68 GEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSP 106
G++ PP PP PP P +PAR PQ +P
Sbjct: 1292 GKRHPPLYQAGLTPPLSPPKSVPPSVPARGLQPQPPATP 1330
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 50.8 bits (120), Expect = 3e-06
Identities = 41/126 (32%), Positives = 47/126 (37%), Gaps = 24/126 (19%)
Query: 7 GGAPGPAPG----PAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPP 62
G GP P P GPPPP P PPQ + R S R G PP
Sbjct: 116 GKPQGPPPQGGNRPQGPPPPGKPQGP---PPQGDKSR--SPRSPPG-------KPQGPPP 163
Query: 63 SLGPGGEKPPPPPAEAREPP--------APPPPEPPTGLPARTPAPQGLLSPTQVPTGLG 114
G + PPPPP + + PP PPPP P G P + + SP P G
Sbjct: 164 QGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPP 223
Query: 115 LDGQRQ 120
G Q
Sbjct: 224 PQGGNQ 229
Score = 50.4 bits (119), Expect = 3e-06
Identities = 41/126 (32%), Positives = 47/126 (37%), Gaps = 24/126 (19%)
Query: 7 GGAPGPAPG----PAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPP 62
G GP P P GPPPP P PPQ + R S R G PP
Sbjct: 55 GKPQGPPPQGGNKPQGPPPPGKPQGP---PPQGDKSR--SPRSPPG-------KPQGPPP 102
Query: 63 SLGPGGEKPPPPPAEAREPP--------APPPPEPPTGLPARTPAPQGLLSPTQVPTGLG 114
G + PPPPP + + PP PPPP P G P + + SP P G
Sbjct: 103 QGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPP 162
Query: 115 LDGQRQ 120
G Q
Sbjct: 163 PQGGNQ 168
Score = 50.4 bits (119), Expect = 3e-06
Identities = 39/119 (32%), Positives = 45/119 (37%), Gaps = 25/119 (21%)
Query: 7 GGAPGPAPG----PAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPP 62
G GP P P GPPPP P PPQ + R G PP
Sbjct: 177 GKPQGPPPQGGKKPQGPPPPGKPQGP---PPQGDKSRSSQSPPGKP---------QGPPP 224
Query: 63 SLGPGGEKPPPPPAEAREPP--------APPPPEPPTGLPARTPA-PQGLLSPTQVPTG 112
G + PPPPP + + PP PPPP P G PA+ + Q SP P G
Sbjct: 225 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQG 283
Score = 42.0 bits (97), Expect = 0.001
Identities = 33/114 (28%), Positives = 39/114 (34%), Gaps = 29/114 (25%)
Query: 10 PGPAPG-PAGPPPPAAPTSAARAPP---QALRRRGDSRRRQAALFFLNNISLDGRPPSLG 65
P P PG P GPPP PP Q +G S+ + A
Sbjct: 233 PPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSAR----------------S 276
Query: 66 PGGEKPPPPPAEAREPPAPPPP---------EPPTGLPARTPAPQGLLSPTQVP 110
P G+ PP E P PPPP PP G P P P P++ P
Sbjct: 277 PPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 330
Score = 38.5 bits (88), Expect = 0.014
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 59 GRPPSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGLDGQ 118
G PP P G+ PPP +P PPPP P G P + + SP P G G
Sbjct: 49 GPPP---PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGG 105
Query: 119 RQ 120
Q
Sbjct: 106 NQ 107
Score = 30.0 bits (66), Expect = 4.8
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 62 PSLGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVP 110
PSL G + P P + PPPP P G P PQG P P
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPPPGKPQG-----PPPQGGNKPQGPP 72
>gi|46852172 kinesin family member 13B [Homo sapiens]
Length = 1826
Score = 50.8 bits (120), Expect = 3e-06
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 17/155 (10%)
Query: 1 MAAAAAGGAPGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGR 60
M A A PA P+ PPP +A P+A ++ +F +++S
Sbjct: 1521 MGAPALKICDKPAKVPS--PPPVIAVTAVTPAPEAQDGPPSPLSEASSGYFSHSVSTATL 1578
Query: 61 PPSLGPG-------GEKPPPPPAEAREPPAPPPPEPPTGLPARTP-APQGLLSPTQVPTG 112
+LGPG G P P AE P + PPP PT +PA P PQ L+SP +
Sbjct: 1579 SDALGPGLDAAAPPGSMPTAPEAEPEAPISHPPP--PTAVPAEEPPGPQQLVSPGRERPD 1636
Query: 113 L-----GLDGQRQRKRVTSQRCSLEFLEDAVGCAP 142
L G + +R R + R L GC+P
Sbjct: 1637 LEAPAPGSPFRVRRVRASELRSFSRMLAGDPGCSP 1671
>gi|118498339 EMI domain containing 2 [Homo sapiens]
Length = 439
Score = 50.8 bits (120), Expect = 3e-06
Identities = 45/135 (33%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 8 GAPGPAPGPAGPPPPAAPTSAARA----PPQALRRRGDSRRRQAALFFLNNISLDGRPPS 63
G PGP PGPAG P P+ P S A P + GDSR A + + L G P
Sbjct: 251 GPPGP-PGPAGNPGPS-PNSPQGALYSLQPPTDKDNGDSRLASAIV----DTVLAGVP-- 302
Query: 64 LGPGGEKPPPPPAEAREPPAPPPPEPPTGLPARTPAPQGLLSPTQVPTGLGLDGQRQRKR 123
GP G PP P R PP PP GL +G + P+ P G+ G+ K
Sbjct: 303 -GPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGE----RGTVGPSGEP---GVKGEEGEKA 354
Query: 124 VTSQRCSLEFLEDAV 138
T++ ++ L +A+
Sbjct: 355 ATAEGEGVQQLREAL 369
Score = 45.8 bits (107), Expect = 8e-05
Identities = 37/98 (37%), Positives = 42/98 (42%), Gaps = 15/98 (15%)
Query: 15 GPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGEKPPPP 74
GPAGPP P A PP + RG + + A G P LGP G P
Sbjct: 197 GPAGPPGQTGPPGPA-GPPGSKGDRGQTGEKGPA----------GPPGLLGPPG--PRGL 243
Query: 75 PAEAREPPAPPPPEPPTGLPARTP-APQGLLSPTQVPT 111
P E P P PP P G P +P +PQG L Q PT
Sbjct: 244 PGEMGRPGPPGPP-GPAGNPGPSPNSPQGALYSLQPPT 280
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 50.4 bits (119), Expect = 3e-06
Identities = 32/92 (34%), Positives = 40/92 (43%), Gaps = 22/92 (23%)
Query: 10 PGPAPGPAGPPPPAAPTSAARAPPQALRRRGDSRRRQAALFFLNNISLDGRPPSLGPGGE 69
P P P PA P PP PT+AA PQ ++ + +P + PGG+
Sbjct: 29 PPPPPPPAAPQPPQPPTAAATPQPQ----------------YVTELQ-SPQPQAQPPGGQ 71
Query: 70 KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQ 101
K E PA P P PTG P +PAPQ
Sbjct: 72 K-----QYVTELPAVPAPSQPTGAPTPSPAPQ 98
Score = 39.7 bits (91), Expect = 0.006
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 7/43 (16%)
Query: 60 RPPSLGPGGE-KPPPPPAEAREPPAPPPPEPPTGLPARTPAPQ 101
+PP P + +PPPPP P AP PP+PPT A TP PQ
Sbjct: 17 QPPQAPPQAQPQPPPPP----PPAAPQPPQPPTA--AATPQPQ 53
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,898,996
Number of Sequences: 37866
Number of extensions: 1590607
Number of successful extensions: 53083
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 1383
Number of HSP's that attempted gapping in prelim test: 18004
Number of HSP's gapped (non-prelim): 17989
length of query: 478
length of database: 18,247,518
effective HSP length: 106
effective length of query: 372
effective length of database: 14,233,722
effective search space: 5294944584
effective search space used: 5294944584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.