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Search of human proteins with 109702906
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|109702906 inositol polyphosphate-5-phosphatase A [Homo
sapiens]
(412 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|109702906 inositol polyphosphate-5-phosphatase A [Homo sapiens] 852 0.0
gi|13325070 phosphatidylinositol polyphosphate 5-phosphatase iso... 47 4e-05
gi|13325072 phosphatidylinositol polyphosphate 5-phosphatase iso... 47 4e-05
gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo sap... 46 5e-05
gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens] 39 0.007
gi|113722125 inositol polyphosphate-5-phosphatase, 75kDa precurs... 36 0.056
gi|40254823 SH2 containing inositol phosphatase isoform b [Homo ... 35 0.16
gi|64085167 SH2 containing inositol phosphatase isoform a [Homo ... 35 0.16
gi|26190608 synaptojanin 2 [Homo sapiens] 34 0.28
gi|20143962 distal-less homeobox 4 isoform a [Homo sapiens] 33 0.47
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 32 0.80
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 32 0.80
gi|237757308 synaptojanin 1 isoform b [Homo sapiens] 32 0.80
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 32 0.80
gi|208610044 inositol polyphosphate-5-phosphatase K isoform 2 [H... 32 1.4
gi|18765707 inositol polyphosphate-5-phosphatase K isoform 2 [Ho... 32 1.4
gi|18765709 inositol polyphosphate-5-phosphatase K isoform 1 [Ho... 32 1.4
gi|38788260 bromodomain PHD finger transcription factor isoform ... 30 3.1
gi|38788274 bromodomain PHD finger transcription factor isoform ... 30 3.1
gi|34147416 breast cancer metastasis-suppressor 1-like [Homo sap... 29 6.8
gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens] 29 8.9
>gi|109702906 inositol polyphosphate-5-phosphatase A [Homo sapiens]
Length = 412
Score = 852 bits (2202), Expect = 0.0
Identities = 412/412 (100%), Positives = 412/412 (100%)
Query: 1 MAGKAAAPGTAVLLVTANVGSLFDDPENLQKNWLREFYQVVHTHKPHFMALHCQEFGGKN 60
MAGKAAAPGTAVLLVTANVGSLFDDPENLQKNWLREFYQVVHTHKPHFMALHCQEFGGKN
Sbjct: 1 MAGKAAAPGTAVLLVTANVGSLFDDPENLQKNWLREFYQVVHTHKPHFMALHCQEFGGKN 60
Query: 61 YEASMSHVDKFVKELLSSDAMKEYNRARVYLDENYKSQEHFTALGSFYFLHESLKNIYQF 120
YEASMSHVDKFVKELLSSDAMKEYNRARVYLDENYKSQEHFTALGSFYFLHESLKNIYQF
Sbjct: 61 YEASMSHVDKFVKELLSSDAMKEYNRARVYLDENYKSQEHFTALGSFYFLHESLKNIYQF 120
Query: 121 DFKAKKYRKVAGKEIYSDTLESTPMLEKEKFPQDYFPECKWSRKGFIRTRWCIADCAFDL 180
DFKAKKYRKVAGKEIYSDTLESTPMLEKEKFPQDYFPECKWSRKGFIRTRWCIADCAFDL
Sbjct: 121 DFKAKKYRKVAGKEIYSDTLESTPMLEKEKFPQDYFPECKWSRKGFIRTRWCIADCAFDL 180
Query: 181 VNIHLFHDASNLVAWETSPSVYSGIRHKALGYVLDRIIDQRFEKVSYFVFGDFNFRLDSK 240
VNIHLFHDASNLVAWETSPSVYSGIRHKALGYVLDRIIDQRFEKVSYFVFGDFNFRLDSK
Sbjct: 181 VNIHLFHDASNLVAWETSPSVYSGIRHKALGYVLDRIIDQRFEKVSYFVFGDFNFRLDSK 240
Query: 241 SVVETLCTKATMQTVRAADTNEVVKLIFRESDNDRKVMLQLEKKLFDYFNQEVFRDNNGT 300
SVVETLCTKATMQTVRAADTNEVVKLIFRESDNDRKVMLQLEKKLFDYFNQEVFRDNNGT
Sbjct: 241 SVVETLCTKATMQTVRAADTNEVVKLIFRESDNDRKVMLQLEKKLFDYFNQEVFRDNNGT 300
Query: 301 ALLEFDKELSVFKDRLYELDISFPPSYPYSEDARQGEQYMNTRCPAWCDRILMSPSAKEL 360
ALLEFDKELSVFKDRLYELDISFPPSYPYSEDARQGEQYMNTRCPAWCDRILMSPSAKEL
Sbjct: 301 ALLEFDKELSVFKDRLYELDISFPPSYPYSEDARQGEQYMNTRCPAWCDRILMSPSAKEL 360
Query: 361 VLRSESEEKVVTYDHIGPNVCMGDHKPVFLAFRIMPGAGKPHAHVHKCCVVQ 412
VLRSESEEKVVTYDHIGPNVCMGDHKPVFLAFRIMPGAGKPHAHVHKCCVVQ
Sbjct: 361 VLRSESEEKVVTYDHIGPNVCMGDHKPVFLAFRIMPGAGKPHAHVHKCCVVQ 412
>gi|13325070 phosphatidylinositol polyphosphate 5-phosphatase
isoform b [Homo sapiens]
Length = 893
Score = 46.6 bits (109), Expect = 4e-05
Identities = 61/240 (25%), Positives = 91/240 (37%), Gaps = 62/240 (25%)
Query: 160 KWSRKGFIRTRWCIADCAFDLVNIHLFHDASNLVAWETSPSVYSGIRHKALGYVLDRIID 219
K KG + R+ + F +VN HL A+++ +E Y I + V ++ +
Sbjct: 351 KMGNKGGVAVRFVFHNTTFCIVNSHL---AAHVEDFERRNQDYKDICARMSFVVPNQTLP 407
Query: 220 Q----RFEKVSYFVFGDFNFRLDSKSVVETLCTKATMQTVRAADTNEVVKLIFRESDNDR 275
Q + E V + GD N+RL C D NEV LI ++ D
Sbjct: 408 QLNIMKHEVVIWL--GDLNYRL---------CMP---------DANEVKSLINKK---DL 444
Query: 276 KVMLQLEKKLFDYFNQEVFRDNNGTALLEFDKELSVFKDRLYELDISFPPSYPYSEDARQ 335
+ +L+ ++ ++ F D N E +I F P+Y Y +
Sbjct: 445 QRLLKFDQLNIQRTQKKAFVDFN-------------------EGEIKFIPTYKYDSKTDR 485
Query: 336 GEQYMNTRCPAWCDRIL-MSPSAKELVLRSESEEKVVTYDHIGPNVCMGDHKPVFLAFRI 394
+ R PAWCDRIL + +L RS E K DHKPV F I
Sbjct: 486 WDSSGKCRVPAWCDRILWRGTNVNQLNYRSHMELKT------------SDHKPVSALFHI 533
>gi|13325072 phosphatidylinositol polyphosphate 5-phosphatase
isoform a [Homo sapiens]
Length = 901
Score = 46.6 bits (109), Expect = 4e-05
Identities = 61/240 (25%), Positives = 91/240 (37%), Gaps = 62/240 (25%)
Query: 160 KWSRKGFIRTRWCIADCAFDLVNIHLFHDASNLVAWETSPSVYSGIRHKALGYVLDRIID 219
K KG + R+ + F +VN HL A+++ +E Y I + V ++ +
Sbjct: 351 KMGNKGGVAVRFVFHNTTFCIVNSHL---AAHVEDFERRNQDYKDICARMSFVVPNQTLP 407
Query: 220 Q----RFEKVSYFVFGDFNFRLDSKSVVETLCTKATMQTVRAADTNEVVKLIFRESDNDR 275
Q + E V + GD N+RL C D NEV LI ++ D
Sbjct: 408 QLNIMKHEVVIWL--GDLNYRL---------CMP---------DANEVKSLINKK---DL 444
Query: 276 KVMLQLEKKLFDYFNQEVFRDNNGTALLEFDKELSVFKDRLYELDISFPPSYPYSEDARQ 335
+ +L+ ++ ++ F D N E +I F P+Y Y +
Sbjct: 445 QRLLKFDQLNIQRTQKKAFVDFN-------------------EGEIKFIPTYKYDSKTDR 485
Query: 336 GEQYMNTRCPAWCDRIL-MSPSAKELVLRSESEEKVVTYDHIGPNVCMGDHKPVFLAFRI 394
+ R PAWCDRIL + +L RS E K DHKPV F I
Sbjct: 486 WDSSGKCRVPAWCDRILWRGTNVNQLNYRSHMELKT------------SDHKPVSALFHI 533
>gi|222136583 inositol polyphosphate phosphatase-like 1 [Homo
sapiens]
Length = 1258
Score = 46.2 bits (108), Expect = 5e-05
Identities = 55/239 (23%), Positives = 89/239 (37%), Gaps = 60/239 (25%)
Query: 164 KGFIRTRWCIADCAFDLVNIHLFHDASNLVAWETSPSVYSGIRHKALGYVLDRIIDQRFE 223
KG + + +F VN HL + N + + +R +LG D
Sbjct: 541 KGAVGVSFMFNGTSFGFVNCHL--TSGNEKTARRNQNYLDILRLLSLGDRQLNAFDISLR 598
Query: 224 KVSYFVFGDFNFRLDSKSVVETLCTKATMQTVRAADTNEVVKLIFRESDNDRKVMLQLEK 283
F FGD N+RLD D E++ I R+ + + +L++++
Sbjct: 599 FTHLFWFGDLNYRLD-------------------MDIQEILNYISRK---EFEPLLRVDQ 636
Query: 284 KLFDYFNQEVFRDNNGTALLEFDKELSVFKDRLYELDISFPPSYPYSEDAR-------QG 336
+ +VF L F +E +ISFPP+Y Y +R Q
Sbjct: 637 LNLEREKHKVF--------LRFSEE-----------EISFPPTYRYERGSRDTYAWHKQK 677
Query: 337 EQYMNTRCPAWCDRILMSPSAKELVLRSESEEKVVTYDH-IGPNVCMGDHKPVFLAFRI 394
+ T P+WCDRIL +S E ++ + ++ DH PVF F +
Sbjct: 678 PTGVRTNVPSWCDRILW---------KSYPETHIICNSYGCTDDIVTSDHSPVFGTFEV 727
>gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens]
Length = 644
Score = 39.3 bits (90), Expect = 0.007
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 50/184 (27%)
Query: 218 IDQRFEKVSYFVFGDFNFRLDS-KSVVETLCTKATMQTVRAADTNEVVKLIFRESDNDRK 276
+ RF++V F FGDFNFRL ++VV+ L + + V A
Sbjct: 465 VTTRFDEV--FWFGDFNFRLSGGRTVVDALLCQGLVVDVPA------------------- 503
Query: 277 VMLQLEKKLFDYFNQEVFRDNNGTALLEFDKELSVFKDRLYELDISFPPSYPYSEDARQG 336
+LQ ++ L+ ++ S+FK E DI F PSY +
Sbjct: 504 -LLQHDQ------------------LIREMRKGSIFKG-FQEPDIHFLPSYKFDIGKDTY 543
Query: 337 EQYMNTRCPAWCDRILMSPSAKELVLRSESEEKVVTYDHIGPNVCMGDHKPVFLAFRIMP 396
+ R P++ DR+L R + + V+Y P + DH+PV+ FR+
Sbjct: 544 DSTSKQRTPSYTDRVLYRS-------RHKGDICPVSYSSC-PGIKTSDHRPVYGLFRVKV 595
Query: 397 GAGK 400
G+
Sbjct: 596 RPGR 599
>gi|113722125 inositol polyphosphate-5-phosphatase, 75kDa precursor
[Homo sapiens]
Length = 913
Score = 36.2 bits (82), Expect = 0.056
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 13/78 (16%)
Query: 318 ELDISFPPSYPYSEDARQGEQYMNTRCPAWCDRIL-MSPSAKELVLRSESEEKVVTYDHI 376
E +++F P+Y Y + + R PAWCDRIL + +L +S K
Sbjct: 493 EGELTFQPTYKYDTGSDDWDTSEKCRAPAWCDRILWKGKNITQLSYQSHMALKT------ 546
Query: 377 GPNVCMGDHKPVFLAFRI 394
DHKPV F I
Sbjct: 547 ------SDHKPVSSVFDI 558
>gi|40254823 SH2 containing inositol phosphatase isoform b [Homo
sapiens]
Length = 1188
Score = 34.7 bits (78), Expect = 0.16
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 57/174 (32%)
Query: 228 FVFGDFNFRLDSKS-VVETLCTKATMQTVRAADTNEVVKLIFRESDNDRKVMLQLEKKLF 286
F FGD N+R+D + ET+ K Q + AD +D+ + + E+K+F
Sbjct: 582 FWFGDLNYRVDLPTWEAETIIQKIKQQ--QYADL----------LSHDQLLTERREQKVF 629
Query: 287 DYFNQEVFRDNNGTALLEFDKELSVFKDRLYELDISFPPSYPYSEDARQGEQY------- 339
+F +E +I+F P+Y + R Y
Sbjct: 630 LHFEEE---------------------------EITFAPTYRFERLTRDKYAYTKQKATG 662
Query: 340 MNTRCPAWCDRIL-MSPSAKELVLRSESEEKVVTYDHIGPNVCMGDHKPVFLAF 392
M P+WCDR+L S +V +S ++ DH PVF F
Sbjct: 663 MKYNLPSWCDRVLWKSYPLVHVVCQSYGSTS---------DIMTSDHSPVFATF 707
>gi|64085167 SH2 containing inositol phosphatase isoform a [Homo
sapiens]
Length = 1189
Score = 34.7 bits (78), Expect = 0.16
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 57/174 (32%)
Query: 228 FVFGDFNFRLDSKS-VVETLCTKATMQTVRAADTNEVVKLIFRESDNDRKVMLQLEKKLF 286
F FGD N+R+D + ET+ K Q + AD +D+ + + E+K+F
Sbjct: 583 FWFGDLNYRVDLPTWEAETIIQKIKQQ--QYADL----------LSHDQLLTERREQKVF 630
Query: 287 DYFNQEVFRDNNGTALLEFDKELSVFKDRLYELDISFPPSYPYSEDARQGEQY------- 339
+F +E +I+F P+Y + R Y
Sbjct: 631 LHFEEE---------------------------EITFAPTYRFERLTRDKYAYTKQKATG 663
Query: 340 MNTRCPAWCDRIL-MSPSAKELVLRSESEEKVVTYDHIGPNVCMGDHKPVFLAF 392
M P+WCDR+L S +V +S ++ DH PVF F
Sbjct: 664 MKYNLPSWCDRVLWKSYPLVHVVCQSYGSTS---------DIMTSDHSPVFATF 708
>gi|26190608 synaptojanin 2 [Homo sapiens]
Length = 1496
Score = 33.9 bits (76), Expect = 0.28
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 287 DYFNQEVF---RDNNGTALLEFDK------ELSVFKDRLYELDISFPPSYPYSEDARQGE 337
D +EVF + + LLEFD+ +FKD +E I+F P+Y Y + +
Sbjct: 732 DLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKD-FHEGAINFGPTYKYDVGSAAYD 790
Query: 338 QYMNTRCPAWCDRIL 352
R PAW DR+L
Sbjct: 791 TSDKCRTPAWTDRVL 805
>gi|20143962 distal-less homeobox 4 isoform a [Homo sapiens]
Length = 240
Score = 33.1 bits (74), Expect = 0.47
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 326 SYPYSEDARQGEQYMNTRCPAWCDRILMSPSAKELVLRSESEE 368
SYPY+E A G+ Y++ + PA + L P+ L ++SE+
Sbjct: 56 SYPYTEPANPGDSYLSCQQPAALSQPLCGPAEHPQELEADSEK 98
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 32.3 bits (72), Expect = 0.80
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 291 QEVFRDNNGTALLEFDKELS------VFKDRLYELDISFPPSYPYSEDARQGEQYMNTRC 344
+E+ R N +L+ D+ ++ VF+ L E ++F P+Y Y + + R
Sbjct: 743 KELIRQQNWDSLIAGDQLINQKNAGQVFRGFL-EGKVTFAPTYKYDLFSDDYDTSEKCRT 801
Query: 345 PAWCDRIL-------MSPSAKELVLRSES---EEKVV------TYDHIG-PNVCMGDHKP 387
PAW DR+L SA++L L + S E K++ T H G + DH+P
Sbjct: 802 PAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRP 861
Query: 388 V 388
V
Sbjct: 862 V 862
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 32.3 bits (72), Expect = 0.80
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 291 QEVFRDNNGTALLEFDKELS------VFKDRLYELDISFPPSYPYSEDARQGEQYMNTRC 344
+E+ R N +L+ D+ ++ VF+ L E ++F P+Y Y + + R
Sbjct: 782 KELIRQQNWDSLIAGDQLINQKNAGQVFRGFL-EGKVTFAPTYKYDLFSDDYDTSEKCRT 840
Query: 345 PAWCDRIL-------MSPSAKELVLRSES---EEKVV------TYDHIG-PNVCMGDHKP 387
PAW DR+L SA++L L + S E K++ T H G + DH+P
Sbjct: 841 PAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRP 900
Query: 388 V 388
V
Sbjct: 901 V 901
>gi|237757308 synaptojanin 1 isoform b [Homo sapiens]
Length = 1350
Score = 32.3 bits (72), Expect = 0.80
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 291 QEVFRDNNGTALLEFDKELS------VFKDRLYELDISFPPSYPYSEDARQGEQYMNTRC 344
+E+ R N +L+ D+ ++ VF+ L E ++F P+Y Y + + R
Sbjct: 782 KELIRQQNWDSLIAGDQLINQKNAGQVFRGFL-EGKVTFAPTYKYDLFSDDYDTSEKCRT 840
Query: 345 PAWCDRIL-------MSPSAKELVLRSES---EEKVV------TYDHIG-PNVCMGDHKP 387
PAW DR+L SA++L L + S E K++ T H G + DH+P
Sbjct: 841 PAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRP 900
Query: 388 V 388
V
Sbjct: 901 V 901
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 32.3 bits (72), Expect = 0.80
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 291 QEVFRDNNGTALLEFDKELS------VFKDRLYELDISFPPSYPYSEDARQGEQYMNTRC 344
+E+ R N +L+ D+ ++ VF+ L E ++F P+Y Y + + R
Sbjct: 738 KELIRQQNWDSLIAGDQLINQKNAGQVFRGFL-EGKVTFAPTYKYDLFSDDYDTSEKCRT 796
Query: 345 PAWCDRIL-------MSPSAKELVLRSES---EEKVV------TYDHIG-PNVCMGDHKP 387
PAW DR+L SA++L L + S E K++ T H G + DH+P
Sbjct: 797 PAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRP 856
Query: 388 V 388
V
Sbjct: 857 V 857
>gi|208610044 inositol polyphosphate-5-phosphatase K isoform 2 [Homo
sapiens]
Length = 372
Score = 31.6 bits (70), Expect = 1.4
Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 20/79 (25%)
Query: 323 FPPSYPYSEDARQGEQYMNTRCPAWCDRILMS-------------PSAKELVLRSESEEK 369
FPP+Y + ++ + R PAW DRIL P A L
Sbjct: 167 FPPTYKFDRNSNDYDTSEKKRKPAWTDRILWRLKRQPCAGPDTPIPPASHFSLSLRGYSS 226
Query: 370 VVTYDHIGPNVCMGDHKPV 388
+TY + DHKPV
Sbjct: 227 HMTYG-------ISDHKPV 238
>gi|18765707 inositol polyphosphate-5-phosphatase K isoform 2 [Homo
sapiens]
Length = 372
Score = 31.6 bits (70), Expect = 1.4
Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 20/79 (25%)
Query: 323 FPPSYPYSEDARQGEQYMNTRCPAWCDRILMS-------------PSAKELVLRSESEEK 369
FPP+Y + ++ + R PAW DRIL P A L
Sbjct: 167 FPPTYKFDRNSNDYDTSEKKRKPAWTDRILWRLKRQPCAGPDTPIPPASHFSLSLRGYSS 226
Query: 370 VVTYDHIGPNVCMGDHKPV 388
+TY + DHKPV
Sbjct: 227 HMTYG-------ISDHKPV 238
>gi|18765709 inositol polyphosphate-5-phosphatase K isoform 1 [Homo
sapiens]
Length = 448
Score = 31.6 bits (70), Expect = 1.4
Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 20/79 (25%)
Query: 323 FPPSYPYSEDARQGEQYMNTRCPAWCDRILMS-------------PSAKELVLRSESEEK 369
FPP+Y + ++ + R PAW DRIL P A L
Sbjct: 243 FPPTYKFDRNSNDYDTSEKKRKPAWTDRILWRLKRQPCAGPDTPIPPASHFSLSLRGYSS 302
Query: 370 VVTYDHIGPNVCMGDHKPV 388
+TY + DHKPV
Sbjct: 303 HMTYG-------ISDHKPV 314
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 30.4 bits (67), Expect = 3.1
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 69 DKFVKELLSSDAMKEYNRARVYLDENYKSQEHFTALGSFYF----LHES--LKNIYQFDF 122
D+ VKELL SD+ K + +D++ K++ H S + E L+ Y+
Sbjct: 1122 DQDVKELLDSDSDKPCKEEPMEVDDDMKTESHVNCQESSQVDVVNVSEGFHLRTSYKKKT 1181
Query: 123 KAKKYRKVAGKEIYSDTLESTPMLEKEK 150
K+ K + + I TLE LEK K
Sbjct: 1182 KSSKLDGLLERRIKQFTLEEKQRLEKIK 1209
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 30.4 bits (67), Expect = 3.1
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 69 DKFVKELLSSDAMKEYNRARVYLDENYKSQEHFTALGSFYF----LHES--LKNIYQFDF 122
D+ VKELL SD+ K + +D++ K++ H S + E L+ Y+
Sbjct: 996 DQDVKELLDSDSDKPCKEEPMEVDDDMKTESHVNCQESSQVDVVNVSEGFHLRTSYKKKT 1055
Query: 123 KAKKYRKVAGKEIYSDTLESTPMLEKEK 150
K+ K + + I TLE LEK K
Sbjct: 1056 KSSKLDGLLERRIKQFTLEEKQRLEKIK 1083
>gi|34147416 breast cancer metastasis-suppressor 1-like [Homo
sapiens]
Length = 323
Score = 29.3 bits (64), Expect = 6.8
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 61 YEASMSHVDKFVKELLSSDAMKEYNRARVYLDENYKSQEHFTALGSFYFLHESLKNIYQF 120
Y+ +S VD ++E+++ A EY L EN + + + L ES+KN Y+
Sbjct: 80 YKERLSQVDAKLQEVIAGKA-PEYLEPLATLQENMQIRTKVAGIYRELCL-ESVKNKYEC 137
Query: 121 DFKAKKYRKVAGKEIYSDTLES 142
+ +A + + K + DT++S
Sbjct: 138 EIQASRQHCESEKLLLYDTVQS 159
>gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens]
Length = 4588
Score = 28.9 bits (63), Expect = 8.9
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 13 LLVTANVGSLFDDPENLQKNWLREFYQV-VHTHKPHFMALHCQEFGGKNYEASMSHVDKF 71
++VT +V L D+P ++ + Y+ + H PH + C K Y+A S +DK
Sbjct: 2374 VIVTVDVTDLNDNPPLFEQ----QIYEARISEHAPHGHFVTCV----KAYDADSSDIDKL 2425
Query: 72 VKELLSSDAMKEY 84
+LS + K +
Sbjct: 2426 QYSILSGNDHKHF 2438
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,536,322
Number of Sequences: 37866
Number of extensions: 661658
Number of successful extensions: 1445
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1423
Number of HSP's gapped (non-prelim): 30
length of query: 412
length of database: 18,247,518
effective HSP length: 105
effective length of query: 307
effective length of database: 14,271,588
effective search space: 4381377516
effective search space used: 4381377516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.