Search of human proteins with 14249568

Search of human proteins with 14249568

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14249568 hypothetical protein LOC84933 [Homo sapiens]
         (380 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14249568 hypothetical protein LOC84933 [Homo sapiens]              766   0.0  
gi|46852174 kinesin family member 3A [Homo sapiens]                    31   1.6  
gi|157743261 tripartite motif-containing 75 [Homo sapiens]             31   2.1  
gi|224809419 Homer, neuronal immediate early gene, 3 isoform 3 [...    30   2.8  
gi|224809414 Homer, neuronal immediate early gene, 3 isoform 1 [...    30   2.8  
gi|224809408 Homer, neuronal immediate early gene, 3 isoform 1 [...    30   2.8  
gi|150418007 RAN binding protein 2 [Homo sapiens]                      30   2.8  
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]    30   2.8  
gi|7661910 tetratricopeptide repeat domain 35 [Homo sapiens]           30   2.8  
gi|156616308 SET and MYND domain containing 4 [Homo sapiens]           30   2.8  
gi|38372917 C1q and tumor necrosis factor related protein 1 isof...    30   3.6  
gi|13569944 C1q and tumor necrosis factor related protein 1 isof...    30   3.6  
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ...    30   3.6  
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo...    30   4.7  
gi|33469964 splicing factor 4 [Homo sapiens]                           29   6.1  
gi|40353738 c-Mpl binding protein isoform a [Homo sapiens]             29   6.1  
gi|40353736 c-Mpl binding protein isoform c [Homo sapiens]             29   6.1  
gi|40353740 c-Mpl binding protein isoform b [Homo sapiens]             29   6.1  
gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens]          29   8.0  
gi|19923646 family with sequence similarity 126, member A [Homo ...    29   8.0  
gi|83367069 cyclin-dependent kinase-like 5 [Homo sapiens]              29   8.0  
gi|4507281 cyclin-dependent kinase-like 5 [Homo sapiens]               29   8.0  
gi|53729363 leucine rich repeat and sterile alpha motif containi...    29   8.0  
gi|53729361 leucine rich repeat and sterile alpha motif containi...    29   8.0  
gi|53729359 leucine rich repeat and sterile alpha motif containi...    29   8.0  
gi|188497714 transmembrane and coiled-coil domain family 3 [Homo...    29   8.0  
gi|154354990 ankyrin repeat domain 26 [Homo sapiens]                   29   8.0  
gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens]                29   8.0  
gi|157785668 coiled-coil domain containing 39 [Homo sapiens]           29   8.0  

>gi|14249568 hypothetical protein LOC84933 [Homo sapiens]
          Length = 380

 Score =  766 bits (1978), Expect = 0.0
 Identities = 380/380 (100%), Positives = 380/380 (100%)

Query: 1   MDSGCWLFGGEFEDSVFEERPERRSGPPASYCAKLCEPQWFYEETESSDDVEVLTLKKFK 60
           MDSGCWLFGGEFEDSVFEERPERRSGPPASYCAKLCEPQWFYEETESSDDVEVLTLKKFK
Sbjct: 1   MDSGCWLFGGEFEDSVFEERPERRSGPPASYCAKLCEPQWFYEETESSDDVEVLTLKKFK 60

Query: 61  GDLAYRRQEYQKALQEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEALEIAANLE 120
           GDLAYRRQEYQKALQEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEALEIAANLE
Sbjct: 61  GDLAYRRQEYQKALQEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEALEIAANLE 120

Query: 121 NKATNTDHLTTVLYLQLAICSSLQNLEKTIFCLQKLISLHPFNPWNWGKLAEAYLNLGPA 180
           NKATNTDHLTTVLYLQLAICSSLQNLEKTIFCLQKLISLHPFNPWNWGKLAEAYLNLGPA
Sbjct: 121 NKATNTDHLTTVLYLQLAICSSLQNLEKTIFCLQKLISLHPFNPWNWGKLAEAYLNLGPA 180

Query: 181 LSAALASSQKQHSFTSSDKTIKSFFPHSGKDCLLCFPETLPESSLFSVEANSSNSQKNEK 240
           LSAALASSQKQHSFTSSDKTIKSFFPHSGKDCLLCFPETLPESSLFSVEANSSNSQKNEK
Sbjct: 181 LSAALASSQKQHSFTSSDKTIKSFFPHSGKDCLLCFPETLPESSLFSVEANSSNSQKNEK 240

Query: 241 ALTNIQNCMAEKRETVLIETQLKACASFIRTRLLLQFTQPQQTSFALERNLRTQQEIEDK 300
           ALTNIQNCMAEKRETVLIETQLKACASFIRTRLLLQFTQPQQTSFALERNLRTQQEIEDK
Sbjct: 241 ALTNIQNCMAEKRETVLIETQLKACASFIRTRLLLQFTQPQQTSFALERNLRTQQEIEDK 300

Query: 301 MKGFSFKEDTLLLIAEVMGEDIPEKIKDEVHPEVKCVGSVALTALVTVSSEEFEDKWFRK 360
           MKGFSFKEDTLLLIAEVMGEDIPEKIKDEVHPEVKCVGSVALTALVTVSSEEFEDKWFRK
Sbjct: 301 MKGFSFKEDTLLLIAEVMGEDIPEKIKDEVHPEVKCVGSVALTALVTVSSEEFEDKWFRK 360

Query: 361 IKDHFCPFENQFHTEIQILA 380
           IKDHFCPFENQFHTEIQILA
Sbjct: 361 IKDHFCPFENQFHTEIQILA 380


>gi|46852174 kinesin family member 3A [Homo sapiens]
          Length = 699

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 9/106 (8%)

Query: 19  ERPERRSGPPASYCAKLCEPQWFYEET----ESSDDVEVLTLKKFKGDLAYRRQEYQKAL 74
           E+ ++R G       K+ E Q   +E     E+  D+E     K + +L  R ++  KA 
Sbjct: 403 EKRKKRRGKKKVSPDKMIEMQAKIDEERKALETKLDMEEEERNKARAELEKREKDLLKAQ 462

Query: 75  QEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEALEIAANLE 120
           QE+ S+ EKLS    A+++ V  G    LA      + LE  +N+E
Sbjct: 463 QEHQSLLEKLS----ALEKKVIVGGVDLLAKAEEQEKLLE-ESNME 503


>gi|157743261 tripartite motif-containing 75 [Homo sapiens]
          Length = 468

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 27/149 (18%)

Query: 28  PASYCAKLCEPQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQKALQEYSSISEKLSST 87
           P   C   C+   F   T+    +E+  L         +  +  K  QE +++ EK +  
Sbjct: 52  PCPVCRHQCQEGHFRSNTQLGRMIEIAKL--------LQSTKSNKRKQEETTLCEKHNQP 103

Query: 88  -NFAMKRDVQEGQARCLA---HLGRHMEALEIAANLENKATNTDHLTTVLYLQLAICSSL 143
            +   K D+      C     H G H+  +E AA               ++ +   CS +
Sbjct: 104 LSVFCKEDLMVLCPLCTQPPDHQGHHVRPIEKAA---------------IHYRKRFCSYI 148

Query: 144 QNLEKTIFCLQKLISLHPFNPWNWGKLAE 172
           Q L+K +  LQKLIS     P    ++ E
Sbjct: 149 QPLKKQLADLQKLISTQSKKPLELREMVE 177


>gi|224809419 Homer, neuronal immediate early gene, 3 isoform 3
           [Homo sapiens]
          Length = 325

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)

Query: 43  EETESSDDVEVLTLKKFKGDL-----AYRRQEYQKALQEYSSISEKLSSTNFAMKRDVQE 97
           E    + D E+ TLK   G       A  R+E Q+ +Q+  + + +L     AM+R ++E
Sbjct: 225 EALVQTKDQEIQTLKSQTGGPREALEAAEREETQQKVQDLETRNAELEHQLRAMERSLEE 284

Query: 98  GQA---RCLAHLGRHMEALEIA 116
            +A   R  A +GR  + L+++
Sbjct: 285 ARAERERARAEVGRAAQLLDVS 306


>gi|224809414 Homer, neuronal immediate early gene, 3 isoform 1
           [Homo sapiens]
          Length = 361

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)

Query: 43  EETESSDDVEVLTLKKFKGDL-----AYRRQEYQKALQEYSSISEKLSSTNFAMKRDVQE 97
           E    + D E+ TLK   G       A  R+E Q+ +Q+  + + +L     AM+R ++E
Sbjct: 261 EALVQTKDQEIQTLKSQTGGPREALEAAEREETQQKVQDLETRNAELEHQLRAMERSLEE 320

Query: 98  GQA---RCLAHLGRHMEALEIA 116
            +A   R  A +GR  + L+++
Sbjct: 321 ARAERERARAEVGRAAQLLDVS 342


>gi|224809408 Homer, neuronal immediate early gene, 3 isoform 1
           [Homo sapiens]
          Length = 361

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)

Query: 43  EETESSDDVEVLTLKKFKGDL-----AYRRQEYQKALQEYSSISEKLSSTNFAMKRDVQE 97
           E    + D E+ TLK   G       A  R+E Q+ +Q+  + + +L     AM+R ++E
Sbjct: 261 EALVQTKDQEIQTLKSQTGGPREALEAAEREETQQKVQDLETRNAELEHQLRAMERSLEE 320

Query: 98  GQA---RCLAHLGRHMEALEIA 116
            +A   R  A +GR  + L+++
Sbjct: 321 ARAERERARAEVGRAAQLLDVS 342


>gi|150418007 RAN binding protein 2 [Homo sapiens]
          Length = 3224

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)

Query: 27   PPASYCAKLCEPQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQKALQEYSSISEKLSS 86
            PP  +C K   P +  EE E  +D E   +KK  G L     E  + L+E ++ +EK   
Sbjct: 2654 PPTFFCYKN-RPDYVSEEEEDDEDFET-AVKKLNGKLYLDGSEKCRPLEENTADNEKECI 2711

Query: 87   TNFAMKRDVQE 97
              +  K  V+E
Sbjct: 2712 IVWEKKPTVEE 2722


>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
          Length = 1976

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 24/95 (25%), Positives = 49/95 (51%), Gaps = 8/95 (8%)

Query: 43  EETESSDDVEVLTLK----KFKGDLAYRRQEYQKALQEYSSISEKLSSTNFAMKRDVQEG 98
           EE   + D E+L +K    K +G+L    +++Q+ L+E + ++E+L +    +  + +E 
Sbjct: 851 EEELQAKDEELLKVKEKQTKVEGELEEMERKHQQLLEEKNILAEQLQAET-ELFAEAEEM 909

Query: 99  QARCLAHLGRHMEALEIAANLENKATNTDHLTTVL 133
           +AR  A   +  E  EI  +LE++    +    +L
Sbjct: 910 RARLAA---KKQELEEILHDLESRVEEEEERNQIL 941


>gi|7661910 tetratricopeptide repeat domain 35 [Homo sapiens]
          Length = 297

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 14/153 (9%)

Query: 56  LKKFKGDLAYRRQEYQKALQEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEAL-E 114
           +K+  G      + Y  A+Q Y  I ++  +   A KR +   +A+     G+++EA+ E
Sbjct: 89  VKRLTGMRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQ-----GKNVEAIRE 143

Query: 115 IAANLENKATNTD--HLTTVLYLQLAICSSLQNLEKTIFCLQKLISLHPFNPWNWGKLAE 172
           +   LE    + +  H    LY+      +  +  K  FCL++L+  +P N     + AE
Sbjct: 144 LNEYLEQFVGDQEAWHELAELYI------NEHDYAKAAFCLEELMMTNPHNHLYCQQYAE 197

Query: 173 AYLNLGPALSAALASSQKQHSFTSSDKTIKSFF 205
                G   +  L+      +   +++ +++ F
Sbjct: 198 VKYTQGGLENLELSRKYFAQALKLNNRNMRALF 230


>gi|156616308 SET and MYND domain containing 4 [Homo sapiens]
          Length = 804

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 39/132 (29%), Positives = 53/132 (40%), Gaps = 16/132 (12%)

Query: 99  QARCLAHLGRHMEALEIAANLENKATNTDHLTTVLYLQLAICSSLQNLEKTIFCLQKLIS 158
           +A CL  LGR  EA +  ++LE   T T  L  VL   L      +NL +    +Q+  S
Sbjct: 149 KAECLVALGRLQEASQTISDLERNFTATPALADVLPQTLQ-----RNLHRLKMKMQEKDS 203

Query: 159 LHPFNPWNWGKLAEAYLNLGPALSAALASSQKQHSFTSSDKTIKSFFPHSGKDCLLCFPE 218
           L    P    K  E          AAL    +Q S  SS   +    P  G+ CL+   +
Sbjct: 204 LTESFPAALAKTLE---------DAALREENEQLSNASSSIGL-CVDPLKGR-CLVATKD 252

Query: 219 TLPESSLFSVEA 230
            LP   L   +A
Sbjct: 253 ILPGELLVQEDA 264


>gi|38372917 C1q and tumor necrosis factor related protein 1 isoform
           1 [Homo sapiens]
          Length = 281

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 20  RPERRSGPPASYCAKLCEPQWFYEETESSDDVEVLTLKKFKGD 62
           RP +  G PAS C + C+P        +   + +  LK  KGD
Sbjct: 61  RPSQDQGLPASRCLRCCDPGTSMYPATAVPQINITILKGEKGD 103


>gi|13569944 C1q and tumor necrosis factor related protein 1 isoform
           1 [Homo sapiens]
          Length = 281

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 20  RPERRSGPPASYCAKLCEPQWFYEETESSDDVEVLTLKKFKGD 62
           RP +  G PAS C + C+P        +   + +  LK  KGD
Sbjct: 61  RPSQDQGLPASRCLRCCDPGTSMYPATAVPQINITILKGEKGD 103


>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
            sapiens]
          Length = 1983

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 16/62 (25%), Positives = 32/62 (51%)

Query: 62   DLAYRRQEYQKALQEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEALEIAANLEN 121
            +LAY+ +E +K L     + +KL S   + KR  +E + +   +L ++ +A     + E 
Sbjct: 1898 ELAYQAEEDRKNLARMQDLVDKLQSKVKSYKRQFEEAEQQANTNLAKYRKAQHELDDAEE 1957

Query: 122  KA 123
            +A
Sbjct: 1958 RA 1959


>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
            sapiens]
          Length = 1938

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 11/83 (13%)

Query: 43   EETESSDDVEVL---------TLKKFKGDLAYRRQEYQKALQEYSSISEKLSS--TNFAM 91
            E  ++SD V++L         T KK + D+A  + E + ++QE  +  EK     T+ AM
Sbjct: 1709 ELLDASDRVQLLHSQNTSLINTKKKLEADIAQCQAEVENSIQESRNAEEKAKKAITDAAM 1768

Query: 92   KRDVQEGQARCLAHLGRHMEALE 114
              +  + +    AHL R  + LE
Sbjct: 1769 MAEELKKEQDTSAHLERMKKNLE 1791


>gi|33469964 splicing factor 4 [Homo sapiens]
          Length = 645

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)

Query: 63  LAYRRQ--EYQKALQEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEALEIAANLE 120
           L YR++  E +K  Q+  + S+K+S       +++ E  AR +A  G  +E + +  N E
Sbjct: 232 LYYRKKVAEIRKEAQKSQAASQKVSPPEDEEVKNLAEKLARFIADGGPEVETIALQNNRE 291

Query: 121 NKA 123
           N+A
Sbjct: 292 NQA 294


>gi|40353738 c-Mpl binding protein isoform a [Homo sapiens]
          Length = 724

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 121 NKATNTDHLTTVLYLQLAICSSLQNLEKTIFCLQKLISLHPFNPWNWGKLAE-AYLNLGP 179
           N A +T+ L   L  QL  C S +NL K ++ + ++ S      W    + E   L   P
Sbjct: 111 NSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDP 170

Query: 180 ALSAALASSQKQHSFTSSDKTIKSFFPHSGKDCLLC---FPETLP 221
            L   +  S          + ++     S K C++     PET P
Sbjct: 171 DLILEVLRSSPMVQVDEKGEKVRP----SHKRCIVILREIPETTP 211


>gi|40353736 c-Mpl binding protein isoform c [Homo sapiens]
          Length = 653

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 121 NKATNTDHLTTVLYLQLAICSSLQNLEKTIFCLQKLISLHPFNPWNWGKLAE-AYLNLGP 179
           N A +T+ L   L  QL  C S +NL K ++ + ++ S      W    + E   L   P
Sbjct: 111 NSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDP 170

Query: 180 ALSAALASSQKQHSFTSSDKTIKSFFPHSGKDCLLC---FPETLP 221
            L   +  S          + ++     S K C++     PET P
Sbjct: 171 DLILEVLRSSPMVQVDEKGEKVRP----SHKRCIVILREIPETTP 211


>gi|40353740 c-Mpl binding protein isoform b [Homo sapiens]
          Length = 730

 Score = 29.3 bits (64), Expect = 6.1
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 8/105 (7%)

Query: 121 NKATNTDHLTTVLYLQLAICSSLQNLEKTIFCLQKLISLHPFNPWNWGKLAE-AYLNLGP 179
           N A +T+ L   L  QL  C S +NL K ++ + ++ S      W    + E   L   P
Sbjct: 117 NSAVSTEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDP 176

Query: 180 ALSAALASSQKQHSFTSSDKTIKSFFPHSGKDCLLC---FPETLP 221
            L   +  S          + ++     S K C++     PET P
Sbjct: 177 DLILEVLRSSPMVQVDEKGEKVRP----SHKRCIVILREIPETTP 217


>gi|42544117 rTS beta protein isoform rTS gamma [Homo sapiens]
          Length = 450

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 14/107 (13%)

Query: 37  EPQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQKALQ-------EYSSISEKLSSTNF 89
           +P W  E T   D +   T+ K    + +++    KALQ          S++E LS    
Sbjct: 292 KPLWIEEPTSPDDILGHATISKCHNRVIFKQLLQAKALQFLQIDSCRLGSVNENLSVLLM 351

Query: 90  AMKRDV---QEGQARCLAHLGRHM---EALEIAANLENKATN-TDHL 129
           A K ++          L  L +H+   + + ++A+LEN+     DHL
Sbjct: 352 AKKFEIPVCPHAGGVGLCELVQHLIIFDYISVSASLENRVCEYVDHL 398


>gi|19923646 family with sequence similarity 126, member A [Homo
           sapiens]
          Length = 521

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 14/136 (10%)

Query: 218 ETLPESSLFSVEANSSNSQKNEKALTNIQNCMAEKRETVLIETQLKACASFIRT--RLLL 275
           +TLPE+SL     N + + K++ +L +    + ++ ++ L+E        F R+    LL
Sbjct: 17  KTLPETSL----PNYATNLKDKSSLVSSLYKVIQEPQSELLEPVCHQLFEFYRSGEEQLL 72

Query: 276 QFTQ---PQ----QTSFALERNLRTQQEIEDKMKG-FSFKEDTLLLIAEVMGEDIPEKIK 327
           QFT    P+      + +  RN+ +   IE  + G ++ +        +V+   IP   K
Sbjct: 73  QFTLQFLPELIWCYLAVSASRNVHSSGCIEALLLGVYNLEIVDKQGHTKVLSFTIPSLSK 132

Query: 328 DEVHPEVKCVGSVALT 343
             V+ E   +GS+ALT
Sbjct: 133 PSVYHEPSSIGSMALT 148


>gi|83367069 cyclin-dependent kinase-like 5 [Homo sapiens]
          Length = 1030

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 187 SSQKQHSFTSSDKTIKSFFPHSGKDCLLCFPETLPESS---LFSVEANSSNSQKNEKALT 243
           S Q +HSF  S ++       + K     + +T+P+SS    +  +A S  +  + K+++
Sbjct: 440 SQQNRHSFMESSQSKAGTLQPNEKQSRHSYIDTIPQSSRSPSYRTKAKSHGALSDSKSVS 499

Query: 244 NIQNCMAEKRE 254
           N+    A+  E
Sbjct: 500 NLSEARAQIAE 510


>gi|4507281 cyclin-dependent kinase-like 5 [Homo sapiens]
          Length = 1030

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 187 SSQKQHSFTSSDKTIKSFFPHSGKDCLLCFPETLPESS---LFSVEANSSNSQKNEKALT 243
           S Q +HSF  S ++       + K     + +T+P+SS    +  +A S  +  + K+++
Sbjct: 440 SQQNRHSFMESSQSKAGTLQPNEKQSRHSYIDTIPQSSRSPSYRTKAKSHGALSDSKSVS 499

Query: 244 NIQNCMAEKRE 254
           N+    A+  E
Sbjct: 500 NLSEARAQIAE 510


>gi|53729363 leucine rich repeat and sterile alpha motif containing
           1 [Homo sapiens]
          Length = 723

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 28/149 (18%), Positives = 64/149 (42%), Gaps = 2/149 (1%)

Query: 13  EDSVFEERPERRSGPPASYCAKLCEPQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQK 72
           E    E   +   GP   +  +  E Q  + + E   + ++L   +F+  L   ++E+ +
Sbjct: 224 EQDGIENSRDSPDGPTDRFSREELEWQNRFSDYEKRKEQKMLEKLEFERRLELGQREHTQ 283

Query: 73  ALQEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEAL--EIAANLENKATNTDHLT 130
            LQ+ SS  +++  T    +  +++G +    HL    + L  ++    +N ++    L 
Sbjct: 284 LLQQSSSQKDEILQTVKEEQSRLEQGLSEHQRHLNAERQRLQEQLKQTEQNISSRIQKLL 343

Query: 131 TVLYLQLAICSSLQNLEKTIFCLQKLISL 159
                Q      L++LE     +++L+S+
Sbjct: 344 QDNQRQKKSSEILKSLENERIRMEQLMSI 372


>gi|53729361 leucine rich repeat and sterile alpha motif containing
           1 [Homo sapiens]
          Length = 723

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 28/149 (18%), Positives = 64/149 (42%), Gaps = 2/149 (1%)

Query: 13  EDSVFEERPERRSGPPASYCAKLCEPQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQK 72
           E    E   +   GP   +  +  E Q  + + E   + ++L   +F+  L   ++E+ +
Sbjct: 224 EQDGIENSRDSPDGPTDRFSREELEWQNRFSDYEKRKEQKMLEKLEFERRLELGQREHTQ 283

Query: 73  ALQEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEAL--EIAANLENKATNTDHLT 130
            LQ+ SS  +++  T    +  +++G +    HL    + L  ++    +N ++    L 
Sbjct: 284 LLQQSSSQKDEILQTVKEEQSRLEQGLSEHQRHLNAERQRLQEQLKQTEQNISSRIQKLL 343

Query: 131 TVLYLQLAICSSLQNLEKTIFCLQKLISL 159
                Q      L++LE     +++L+S+
Sbjct: 344 QDNQRQKKSSEILKSLENERIRMEQLMSI 372


>gi|53729359 leucine rich repeat and sterile alpha motif containing
           1 [Homo sapiens]
          Length = 723

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 28/149 (18%), Positives = 64/149 (42%), Gaps = 2/149 (1%)

Query: 13  EDSVFEERPERRSGPPASYCAKLCEPQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQK 72
           E    E   +   GP   +  +  E Q  + + E   + ++L   +F+  L   ++E+ +
Sbjct: 224 EQDGIENSRDSPDGPTDRFSREELEWQNRFSDYEKRKEQKMLEKLEFERRLELGQREHTQ 283

Query: 73  ALQEYSSISEKLSSTNFAMKRDVQEGQARCLAHLGRHMEAL--EIAANLENKATNTDHLT 130
            LQ+ SS  +++  T    +  +++G +    HL    + L  ++    +N ++    L 
Sbjct: 284 LLQQSSSQKDEILQTVKEEQSRLEQGLSEHQRHLNAERQRLQEQLKQTEQNISSRIQKLL 343

Query: 131 TVLYLQLAICSSLQNLEKTIFCLQKLISL 159
                Q      L++LE     +++L+S+
Sbjct: 344 QDNQRQKKSSEILKSLENERIRMEQLMSI 372


>gi|188497714 transmembrane and coiled-coil domain family 3 [Homo
           sapiens]
          Length = 477

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 15/122 (12%)

Query: 35  LCEPQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQKALQEYSSISEKLSSTNFAMKRD 94
           L E ++ YE  E  D +  LT      DL   + E     QE +SI EK++   +   RD
Sbjct: 326 LQEERYRYERLE--DQLHDLT------DL--HQHETANLKQELASIEEKVAYQAYERSRD 375

Query: 95  VQEGQARCLAHLGRHMEALEIAANLENKATNTDHLTTVLYLQLAICSSLQNLEKTIFCLQ 154
           +QE    C   + +    LE+    E +A  TD +   + L   I   L  +   + C+ 
Sbjct: 376 IQEALESCQTRISK----LELHQQ-EQQALQTDTVNAKVLLGRCINVILAFMTVILVCVS 430

Query: 155 KL 156
            +
Sbjct: 431 TI 432


>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
          Length = 1710

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 22/100 (22%), Positives = 44/100 (44%)

Query: 22   ERRSGPPASYCAKLCEPQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQKALQEYSSIS 81
            E R+    S C  L E Q+ YE  ++  +V V  L++   D   ++   + +L+  S   
Sbjct: 1190 EERNKELISECNHLKERQYQYENEKAEREVVVRQLQQELADTLKKQSMSEASLEVTSRYR 1249

Query: 82   EKLSSTNFAMKRDVQEGQARCLAHLGRHMEALEIAANLEN 121
              L      +K+ + + + +      RH EA+  A  +++
Sbjct: 1250 INLEDETQDLKKKLGQIRNQLQEAQDRHTEAVRCAEKMQD 1289


>gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens]
          Length = 291

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 87  TNFAMKRDVQ-EGQARCLAHLGRHMEALEIAANLENKATNTDHLTTVLYLQLAICSSLQN 145
           +NF    + Q +G +    ++GR M++LE     + K  + DH + +L+++  + S L++
Sbjct: 78  SNFTASTEAQVKGLSTQGGNVGRKMKSLESQLEKQQKDLSEDHSSLLLHVKQFV-SDLRS 136

Query: 146 LEKTIFCLQKLISLHPFNPWNW 167
           L   +  LQ   S     P NW
Sbjct: 137 LSCQMAALQGNGSERTCCPVNW 158


>gi|157785668 coiled-coil domain containing 39 [Homo sapiens]
          Length = 941

 Score = 28.9 bits (63), Expect = 8.0
 Identities = 17/65 (26%), Positives = 32/65 (49%)

Query: 33  AKLCEPQWFYEETESSDDVEVLTLKKFKGDLAYRRQEYQKALQEYSSISEKLSSTNFAMK 92
           AK+ E +   EE +S+  +    +KK   DL + ++ + K   E  S+  K++  N  + 
Sbjct: 482 AKIVELRKSLEEKKSTCGLLETQIKKLHNDLYFIKKAHSKNSDEKQSLMTKINELNLFID 541

Query: 93  RDVQE 97
           R  +E
Sbjct: 542 RSEKE 546


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.130    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,587,767
Number of Sequences: 37866
Number of extensions: 549696
Number of successful extensions: 1923
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1913
Number of HSP's gapped (non-prelim): 34
length of query: 380
length of database: 18,247,518
effective HSP length: 104
effective length of query: 276
effective length of database: 14,309,454
effective search space: 3949409304
effective search space used: 3949409304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.