LOC100290048 21136

Name: LOC100290048	Sequence: fasta or formatted (242aa)		NCBI GI: 239752205
Description: PREDICTED: hypothetical protein XP_002348148		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 17 2 C cysteine 3.3 8 1 D aspartate 2.9 7 1 E glutamate 5.0 12 2 F phenylalanine 2.9 7 1 G glycine 11.2 27 2 H histidine 2.9 7 1 I isoleucine 1.7 4 1 K lysine 5.0 12 2 L leucine 12.4 30 5 M methionine 0.8 2 1 N asparagine 1.7 4 1 P proline 10.7 26 2 Q glutamine 5.0 12 1 R arginine 9.1 22 2 S serine 6.2 15 2 T threonine 5.8 14 3 V valine 5.0 12 2 W tryptophan 0.8 2 1 Y tyrosine 0.8 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002348148 LOC100292113 1.000 PREDICTED: hypothetical protein XP_002345530 LOC100288945 1.000 PREDICTED: hypothetical protein XP_002343821 LOC100292383 0.031 PREDICTED: hypothetical protein C9orf140 0.029 tumor specificity and mitosis phase-dependent expre... TSC2 0.025 tuberous sclerosis 2 isoform 4 TSC2 0.025 tuberous sclerosis 2 isoform 1 TSC2 0.025 tuberous sclerosis 2 isoform 5 LOC100291807 0.023 PREDICTED: hypothetical protein XP_002345507 LOC100128074 0.017 PREDICTED: hypothetical protein COL5A2 0.017 alpha 2 type V collagen preproprotein FOXA1 0.017 forkhead box A1 LOC100293129 0.017 PREDICTED: hypothetical protein LOC100290783 0.017 PREDICTED: hypothetical protein XP_002347614 LOC388279 0.017 PREDICTED: hypothetical protein LOC100288864 0.017 PREDICTED: hypothetical protein XP_002343435 LOC100294103 0.017 PREDICTED: hypothetical protein COL9A3 0.017 alpha 3 type IX collagen COLQ 0.015 acetylcholinesterase collagen-like tail subunit iso... COLQ 0.015 acetylcholinesterase collagen-like tail subunit isof... COLQ 0.015 acetylcholinesterase collagen-like tail subunit isof... RBM15B 0.015 RNA binding motif protein 15B SEC16A 0.015 SEC16 homolog A NKX1-1 0.015 PREDICTED: NK1 homeobox 1 LOC100290444 0.015 PREDICTED: hypothetical protein XP_002348216 COL18A1 0.015 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.015 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.015 alpha 1 type XVIII collagen isoform 1 precursor [Ho... COL4A5 0.015 type IV collagen alpha 5 isoform 2 precursor COL4A5 0.015 type IV collagen alpha 5 isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.