Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RAB24 Sequence: fasta or formatted (203aa) NCBI GI: 96975135
Description:

RAB24 gene product

Referenced in:

Rab

Other entries for this name:
alt mRNA [203aa] RAB24 gene product
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         14           2
 C cysteine            2.5          5           2
 D aspartate           7.9         16           1
 E glutamate           6.9         14           2
 F phenylalanine       4.4          9           1
 G glycine             6.9         14           1
 H histidine           2.0          4           2
 I isoleucine          3.0          6           1
 K lysine              6.4         13           1
 L leucine             6.4         13           2
 M methionine          2.5          5           1
 N asparagine          1.5          3           1
 P proline             1.5          3           1
 Q glutamine           4.4          9           1
 R arginine            6.9         14           5
 S serine              7.4         15           3
 T threonine           4.9         10           1
 V valine             10.8         22           2
 W tryptophan          1.0          2           1
 Y tyrosine            5.9         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB24 gene product 
RAB24                 1.000   RAB24 gene product 
RAB5A                 0.302   RAB5A, member RAS oncogene family 
RAB5C                 0.294   RAB5C, member RAS oncogene family isoform a 
RAB5C                 0.294   RAB5C, member RAS oncogene family isoform b 
RAB5B                 0.286   RAB5B, member RAS oncogene family 
RAB21                 0.276   RAB21, member RAS oncogene family 
RAB22A                0.253   RAS-related protein RAB-22A 
RAB17                 0.250   RAB17, member RAS oncogene family 
RAB6B                 0.250   RAB6B, member RAS oncogene family 
RAB6A                 0.245   RAB6A, member RAS oncogene family isoform a 
RAB6A                 0.242   RAB6A, member RAS oncogene family isoform b 
RAB31                 0.232   RAB31, member RAS oncogene family 
RAB35                 0.214   RAB35, member RAS oncogene family 
RAB4B                 0.214   ras-related GTP-binding protein 4b 
RAB37                 0.211   RAB37, member RAS oncogene family isoform 3 
RAB13                 0.211   RAB13, member RAS oncogene family 
LOC100131294          0.209   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.209   PREDICTED: similar to hCG24991 
LOC100131294          0.209   PREDICTED: similar to hCG24991 
RAB1A                 0.206   RAB1A, member RAS oncogene family isoform 1 
RAB11B                0.206   RAB11B, member RAS oncogene family 
RAB11A                0.206   Ras-related protein Rab-11A 
RAB41                 0.206   RAB41, member RAS oncogene family 
LOC150786             0.204   RAB6C-like 
RAB7B                 0.204   RAB7B, member RAS oncogene family 
RAB6C                 0.201   RAB6C, member RAS oncogene family 
RAB1B                 0.201   RAB1B, member RAS oncogene family 
RAB4A                 0.201   RAB4A, member RAS oncogene family 
RAB36                 0.201   RAB36, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press