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Search of human proteins with 9507239
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9507239 immunoglobulin iota chain precursor [Homo sapiens]
(145 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9507239 immunoglobulin iota chain precursor [Homo sapiens] 308 1e-84
gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens] 144 3e-35
gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens] 144 3e-35
gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens] 90 6e-19
gi|7019567 pre-B lymphocyte 3 [Homo sapiens] 87 5e-18
gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ... 83 7e-17
gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens] 81 3e-16
gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens] 67 5e-12
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] 62 2e-10
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 60 6e-10
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 60 6e-10
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 60 6e-10
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 60 6e-10
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... 60 8e-10
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 59 2e-09
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 56 9e-09
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 56 9e-09
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 56 1e-08
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 56 1e-08
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 56 1e-08
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 54 4e-08
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 54 4e-08
gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo ... 53 8e-08
gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens] 52 2e-07
gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens] 52 2e-07
gi|239750767 PREDICTED: hypothetical protein XP_002347529 [Homo ... 50 5e-07
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 50 5e-07
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 50 5e-07
gi|239745527 PREDICTED: hypothetical protein XP_002343511 [Homo ... 50 9e-07
gi|169207532 PREDICTED: similar to hCG2042717 [Homo sapiens] 49 1e-06
>gi|9507239 immunoglobulin iota chain precursor [Homo sapiens]
Length = 145
Score = 308 bits (788), Expect = 1e-84
Identities = 145/145 (100%), Positives = 145/145 (100%)
Query: 1 MSWAPVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQR 60
MSWAPVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQR
Sbjct: 1 MSWAPVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQR 60
Query: 61 PGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGAR 120
PGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGAR
Sbjct: 61 PGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGAR 120
Query: 121 SSEKEEREREWEEEMEPTAARTRVP 145
SSEKEEREREWEEEMEPTAARTRVP
Sbjct: 121 SSEKEEREREWEEEMEPTAARTRVP 145
>gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 144 bits (362), Expect = 3e-35
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1 MSWAPVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQR 60
M+W P+LL+ +CTG QPVL QP ++S++ G + R TCTLR+ ++G Y +YWYQQ+
Sbjct: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
Query: 61 PGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGAR 120
PG PR+LLRY S SDK QG VP RFSGSKD + N G L IS LQ EDEA YYCA+
Sbjct: 61 PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
Query: 121 SSEKEE 126
S+ +
Sbjct: 121 STSHSD 126
>gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 144 bits (362), Expect = 3e-35
Identities = 68/126 (53%), Positives = 87/126 (69%)
Query: 1 MSWAPVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQR 60
M+W P+LL+ +CTG QPVL QP ++S++ G + R TCTLR+ ++G Y +YWYQQ+
Sbjct: 1 MAWTPLLLLFLSHCTGSLSQPVLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQK 60
Query: 61 PGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGAR 120
PG PR+LLRY S SDK QG VP RFSGSKD + N G L IS LQ EDEA YYCA+
Sbjct: 61 PGSLPRYLLRYKSDSDKQQGSGVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCAIWYS 120
Query: 121 SSEKEE 126
S+ +
Sbjct: 121 STSHSD 126
>gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens]
Length = 137
Score = 90.1 bits (222), Expect = 6e-19
Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 9/136 (6%)
Query: 1 MSWAPVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQR 60
M+W +LL L +CTG VL QPP++S A G T R+TC ++IG SV+WYQQ+
Sbjct: 1 MAWTVLLLGLLSHCTGSVTSYVLTQPPSVSVAPGKTARITC---GGNNIGSKSVHWYQQK 57
Query: 61 PGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGAR 120
PG P +L + SD+ G +P RFSGS + N L+IS ++ DEA YYC +
Sbjct: 58 PGQAP--VLVVYDDSDRPSG--IPERFSGSN--SGNTATLTISRVEAGDEADYYCQVWDS 111
Query: 121 SSEKEEREREWEEEME 136
SS+ + EE+ +
Sbjct: 112 SSDHPTVTQADEEDSD 127
>gi|7019567 pre-B lymphocyte 3 [Homo sapiens]
Length = 123
Score = 87.0 bits (214), Expect = 5e-18
Identities = 47/100 (47%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 20 QPVLHQPPAMSSALGTTIRLTCTLRNDH-DIGVYSVYWYQQRPGHPPRFLLRYFSQSDKS 78
Q VL Q A+ G +L+CTL H I Y V WYQQR G PR+LL Y S+ D
Sbjct: 19 QTVLAQLDALLVFPGQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEEDHH 78
Query: 79 QGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMG 118
+ +P RFS +KD A N L+IS +QPED+A YYC++G
Sbjct: 79 RPADIPDRFSAAKDEAHNACVLTISPVQPEDDADYYCSVG 118
>gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo
sapiens]
Length = 264
Score = 83.2 bits (204), Expect = 7e-17
Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 7/116 (6%)
Query: 1 MSWAPVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQR 60
M+ P+LL L +C G Q VL QPP+ S G + ++C+ + +IG +V WYQQ
Sbjct: 27 MASFPLLLTLLTHCAGSWAQSVLTQPPSASGTPGQRVTISCS-GSSSNIGSNTVNWYQQL 85
Query: 61 PGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCA 116
PG P+ L+ +S + + G VP RFSGSK + L+IS LQ EDEA YYCA
Sbjct: 86 PGTAPKLLI--YSNNQRPSG--VPDRFSGSK--SGTSASLAISGLQSEDEADYYCA 135
>gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens]
Length = 288
Score = 81.3 bits (199), Expect = 3e-16
Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 8/135 (5%)
Query: 1 MSWAPVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYS-VYWYQQ 59
M+WA + L L TG Q L QP ++S + G +I ++CT D+G Y+ V WYQQ
Sbjct: 1 MAWALLFLTLLTQGTGSWAQSALTQPASVSGSPGQSITISCT-GTSSDVGGYNYVSWYQQ 59
Query: 60 RPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGA 119
PG P+ ++ + S++ G V RFSGSK + N L+IS LQ EDEA YYC+
Sbjct: 60 HPGKAPKLMI--YDVSNRPSG--VSNRFSGSK--SGNTASLTISGLQAEDEADYYCSSYT 113
Query: 120 RSSEKEEREREWEEE 134
SS W E
Sbjct: 114 SSSTLHSGPSSWGTE 128
Score = 50.4 bits (119), Expect = 5e-07
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 15/99 (15%)
Query: 23 LHQPPAMSSALGTTIRLTCT---LRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQ 79
L QPPA+S + G T R++C+ LR+++ WY Q+PG P +L + ++
Sbjct: 201 LTQPPAVSVSPGQTARISCSGDVLRDNY------ADWYPQKPGQAP--VLVIYKDGERPS 252
Query: 80 GPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMG 118
G +P RFSGS + N L+IS + + A YYC G
Sbjct: 253 G--IPERFSGS--TSGNTTALTISRVLTKGGADYYCFSG 287
>gi|239757664 PREDICTED: similar to hCG2040019 [Homo sapiens]
Length = 645
Score = 67.0 bits (162), Expect = 5e-12
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 1 MSWAPVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQR 60
M+W P+LL L + CT L QP ++S + G T R+TC + + W+QQ+
Sbjct: 470 MAWIPLLLPLLILCTVSVASYELTQPSSVSVSPGQTARITC---SGDVLAKKYARWFQQK 526
Query: 61 PGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYCAMGA 119
PG P +L + S++ G +P RFSGS + L+IS Q EDEA YYC A
Sbjct: 527 PGQAP--VLVIYKDSERPSG--IPERFSGSS--SGTTVTLTISGAQVEDEADYYCYSAA 579
Score = 28.1 bits (61), Expect = 2.7
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 96 NRGYLSISELQPEDEAMYYCA 116
N ++IS LQ EDEA YYC+
Sbjct: 401 NMASMTISGLQAEDEADYYCS 421
>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
Length = 142
Score = 62.0 bits (149), Expect = 2e-10
Identities = 44/110 (40%), Positives = 61/110 (55%), Gaps = 12/110 (10%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL+L++ T C Q + P ++S+++G + +TC R I S+ WYQQ+PG P+
Sbjct: 21 LLLLWLPGTRCDIQ-MTQSPSSLSASVGDRVTITC--RASQGIS-NSLAWYQQKPGKAPK 76
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGY-LSISELQPEDEAMYYC 115
LL S+ + VP RFSGS Y L+IS LQPED A YYC
Sbjct: 77 LLLYAASRLESG----VPSRFSGS---GSGTDYTLTISSLQPEDFATYYC 119
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 60.1 bits (144), Expect = 6e-10
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 10/109 (9%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL+L++ C Q V P ++S+++G + +TC G+ WYQQ+PG P
Sbjct: 12 LLLLWLRGARCDIQ-VTQSPSSLSASVGDRVTITCRASQGISNGLS---WYQQKPGQAPT 67
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYC 115
L+ ++ S G VP RFSGS + L+IS LQPED A YYC
Sbjct: 68 LLI--YAASSLQSG--VPSRFSGSG--SGTDFTLTISSLQPEDVATYYC 110
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 60.1 bits (144), Expect = 6e-10
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 10/109 (9%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL+L++ C Q V P ++S+++G + +TC G+ WYQQ+PG P
Sbjct: 12 LLLLWLRGARCDIQ-VTQSPSSLSASVGDRVTITCRASQGISNGLS---WYQQKPGQAPT 67
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYC 115
L+ ++ S G VP RFSGS + L+IS LQPED A YYC
Sbjct: 68 LLI--YAASSLQSG--VPSRFSGSG--SGTDFTLTISSLQPEDVATYYC 110
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 60.1 bits (144), Expect = 6e-10
Identities = 41/109 (37%), Positives = 58/109 (53%), Gaps = 10/109 (9%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL+L++ C Q V P ++S+++G + +TC G+ WYQQ+PG P
Sbjct: 12 LLLLWLRGARCDIQ-VTQSPSSLSASVGDRVTITCRASQGISNGLS---WYQQKPGQAPT 67
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYC 115
L+ ++ S G VP RFSGS + L+IS LQPED A YYC
Sbjct: 68 LLI--YAASSLQSG--VPSRFSGSG--SGTDFTLTISSLQPEDVATYYC 110
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 60.1 bits (144), Expect = 6e-10
Identities = 41/112 (36%), Positives = 59/112 (52%), Gaps = 7/112 (6%)
Query: 4 APVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGH 63
A +L +L ++ + V+ Q PA S L R T + R + + WYQQ+PG
Sbjct: 5 AQLLFLLLLWLPDTTGEIVMTQSPATLS-LSPGERATLSCRASQSVSSSYLSWYQQKPGQ 63
Query: 64 PPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYC 115
PR L+ + S ++ G +P RFSGS + L+IS LQPED A+YYC
Sbjct: 64 APRLLI--YGASTRATG--IPARFSGSG--SGTDFTLTISSLQPEDFAVYYC 109
>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
sapiens]
Length = 123
Score = 59.7 bits (143), Expect = 8e-10
Identities = 42/109 (38%), Positives = 60/109 (55%), Gaps = 10/109 (9%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL+L++ C Q + P +S+++G + +TC R I Y + WYQQ+PG P+
Sbjct: 12 LLLLWLPGARCDIQ-LTQSPSFLSASVGDRVTITC--RASQGISSY-LAWYQQKPGKAPK 67
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYC 115
L+ ++ S G VP RFSGS + L+IS LQPED A YYC
Sbjct: 68 LLI--YAASTLQSG--VPSRFSGSG--SGTEFTLTISSLQPEDFATYYC 110
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 58.5 bits (140), Expect = 2e-09
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 4 APVLLMLFVYCTGCGP-----QPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQ 58
A +L +L ++ G G + V+ Q PA S L R T + R + + WYQ
Sbjct: 5 AQLLFLLLLWLPGEGNMRYHGEIVMTQSPATLS-LSPGERATLSCRASQSVSSSYLSWYQ 63
Query: 59 QRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYC 115
Q+PG PR L+ + S ++ G +P RFSGS + L+IS LQPED A+YYC
Sbjct: 64 QKPGQAPRLLI--YGASTRATG--IPARFSGSG--SGTDFTLTISSLQPEDFAVYYC 114
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 56.2 bits (134), Expect = 9e-09
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 4 APVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGH 63
A +L +L ++ + VL Q PA S L R T + + + WYQQ+PG
Sbjct: 5 AQLLFLLLLWLPDTTGEIVLTQSPATLS-LSPGERATLSCGASQSVSSSYLAWYQQKPGL 63
Query: 64 PPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYC 115
PR L+ + S ++ G +P RFSGS + L+IS L+PED A+YYC
Sbjct: 64 APRLLI--YDASSRATG--IPDRFSGSG--SGTDFTLTISRLEPEDFAVYYC 109
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 56.2 bits (134), Expect = 9e-09
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 4 APVLLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGH 63
A +L +L ++ + VL Q PA S L R T + + + WYQQ+PG
Sbjct: 5 AQLLFLLLLWLPDTTGEIVLTQSPATLS-LSPGERATLSCGASQSVSSSYLAWYQQKPGL 63
Query: 64 PPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYC 115
PR L+ + S ++ G +P RFSGS + L+IS L+PED A+YYC
Sbjct: 64 APRLLI--YDASSRATG--IPDRFSGSG--SGTDFTLTISRLEPEDFAVYYC 109
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 55.8 bits (133), Expect = 1e-08
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL+L++ C Q + P ++S+++G + +TC R I ++ WYQQ+PG P+
Sbjct: 183 LLVLWLPGARCDIQ-MTQSPSSLSASVGDRVTITC--RASQGIS-NNLNWYQQKPGKTPK 238
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGY-LSISELQPEDEAMYYCAMGARSS 122
L+ ++ S G +P RFS D Y L+IS LQPED A YYC +S
Sbjct: 239 LLI--YAASSLQSG--IPSRFS---DSGSGTDYTLTISSLQPEDFATYYCQQSDSTS 288
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 55.8 bits (133), Expect = 1e-08
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL+L++ C Q + P ++S+++G + +TC R I ++ WYQQ+PG P+
Sbjct: 129 LLVLWLPGARCDIQ-MTQSPSSLSASVGDRVTITC--RASQGIS-NNLNWYQQKPGKTPK 184
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGY-LSISELQPEDEAMYYCAMGARSS 122
L+ ++ S G +P RFS D Y L+IS LQPED A YYC +S
Sbjct: 185 LLI--YAASSLQSG--IPSRFS---DSGSGTDYTLTISSLQPEDFATYYCQQSDSTS 234
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 55.8 bits (133), Expect = 1e-08
Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL+L++ C Q + P ++S+++G + +TC R I ++ WYQQ+PG P+
Sbjct: 129 LLVLWLPGARCDIQ-MTQSPSSLSASVGDRVTITC--RASQGIS-NNLNWYQQKPGKTPK 184
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGY-LSISELQPEDEAMYYCAMGARSS 122
L+ ++ S G +P RFS D Y L+IS LQPED A YYC +S
Sbjct: 185 LLI--YAASSLQSG--IPSRFS---DSGSGTDYTLTISSLQPEDFATYYCQQSDSTS 234
>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 295
Score = 54.3 bits (129), Expect = 4e-08
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL L++ C Q + P ++S+++G + +TC R I ++ WYQQ+PG P+
Sbjct: 182 LLGLWLPGARCDIQ-MTQSPSSLSASVGGRVTITC--RASQGIS-NNLNWYQQKPGKTPK 237
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYC 115
L+ ++ S G +P RFS S A L+IS LQPED A YYC
Sbjct: 238 LLI--YAASSLQSG--IPSRFSDSGSGADYT--LTISSLQPEDFAAYYC 280
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 54.3 bits (129), Expect = 4e-08
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 10/109 (9%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL+L++ C Q + P ++S+++G + +TC R I ++ WYQQ+PG P+
Sbjct: 523 LLVLWLPGARCDIQ-MTQSPSSLSASVGDRVTITC--RASQGIS-NNLNWYQQKPGKTPK 578
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISELQPEDEAMYYC 115
L+ ++ S G +P RFS S A L+I LQPED A YYC
Sbjct: 579 LLI--YAASSLQSG--IPSRFSDSGSGADYT--LTIRSLQPEDFATYYC 621
>gi|239747814 PREDICTED: hypothetical protein XP_002348323 [Homo
sapiens]
Length = 162
Score = 53.1 bits (126), Expect = 8e-08
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 25 QPPA-MSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQV 83
QPP+ +S+++G ++ +TC + WYQQ+PG P+ L+ S V
Sbjct: 78 QPPSSLSASVGDSVTITCRASQSF---TNQLAWYQQKPGKAPKLLIYRVSSLQTG----V 130
Query: 84 PPRFSGSKDVARNRGYLSISELQPEDEAMYYC 115
P FSGS+ + L+IS LQP+D A YYC
Sbjct: 131 PSLFSGSE--SGTDFTLTISSLQPDDVATYYC 160
>gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 51.6 bits (122), Expect = 2e-07
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL+ ++ C Q + P ++S+++G + +TC R I + ++ WYQ++PG P+
Sbjct: 92 LLVFWLPGVRCDIQ-MTQSPSSLSASVGDRVTITC--RASQGI-INNLNWYQKKPGKTPK 147
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYL-SISELQPEDEAMYYC 115
L+ ++ S G +P RFS D Y +IS LQPED A YYC
Sbjct: 148 LLI--YAASSLQSG--IPTRFS---DSGSGTDYTPTISSLQPEDFATYYC 190
>gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 51.6 bits (122), Expect = 2e-07
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 12/110 (10%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL+ ++ C Q + P ++S+++G + +TC R I + ++ WYQ++PG P+
Sbjct: 92 LLVFWLPGVRCDIQ-MTQSPSSLSASVGDRVTITC--RASQGI-INNLNWYQKKPGKTPK 147
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYL-SISELQPEDEAMYYC 115
L+ ++ S G +P RFS D Y +IS LQPED A YYC
Sbjct: 148 LLI--YAASSLQSG--IPTRFS---DSGSGTDYTPTISSLQPEDFATYYC 190
>gi|239750767 PREDICTED: hypothetical protein XP_002347529 [Homo
sapiens]
Length = 184
Score = 50.4 bits (119), Expect = 5e-07
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 34 GTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDV 93
G ++RL+C + Y + W +Q PG ++ S S V RF+ S+D
Sbjct: 55 GGSLRLSCAA-SGFTFSDYYMNWVRQAPGKGLEWVSSISSSSTIYYADSVKGRFTISRDN 113
Query: 94 ARNRGYLSISELQPEDEAMYYCAMG-ARSSEKEERER 129
A+N YL ++ L+ ED A+YYCA R S+ E R +
Sbjct: 114 AKNSLYLQMNSLRAEDTAVYYCARDTVRGSQCEPRHK 150
>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 276
Score = 50.4 bits (119), Expect = 5e-07
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL L++ C Q + P ++S+++G + +TC R I ++ WYQQ+P P+
Sbjct: 163 LLGLWLPGVRCDIQ-MTQSPSSLSASVGGRVTITC--RASQGIS-NNLNWYQQKPRKTPK 218
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGY-LSISELQPEDEAMYYC 115
L+ ++ S G +P RFS D Y L+IS LQPED A YYC
Sbjct: 219 LLI--YAASSLQSG--IPSRFS---DSGSGTDYTLTISSLQPEDFATYYC 261
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 50.4 bits (119), Expect = 5e-07
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 12/110 (10%)
Query: 7 LLMLFVYCTGCGPQPVLHQPPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPR 66
LL L++ C Q + P ++S+++G + +TC R I ++ WYQQ+P P+
Sbjct: 648 LLGLWLPGARCDIQ-MTQSPSSLSASVGGRVTITC--RASQGIS-NNLNWYQQKPRKTPK 703
Query: 67 FLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGY-LSISELQPEDEAMYYC 115
L+ ++ S G +P RFS D Y L+IS LQPED A YYC
Sbjct: 704 LLI--YAASSLQSG--IPSRFS---DSGSGTDYTLTISSLQPEDFATYYC 746
>gi|239745527 PREDICTED: hypothetical protein XP_002343511 [Homo
sapiens]
Length = 147
Score = 49.7 bits (117), Expect = 9e-07
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 34 GTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDV 93
G ++RL+C + Y+++W +Q PG ++ + V RF+ S+D
Sbjct: 34 GGSLRLSCA-GSGFTFSSYAMHWVRQAPGKGLEWVSAIGTGGGTYYADSVKGRFTISRDN 92
Query: 94 ARNRGYLSISELQPEDEAMYYCAMG-ARSSEKEERER 129
A+N YL ++ L+ ED A+YYCA R S+ E R +
Sbjct: 93 AKNSLYLQMNSLRAEDMAVYYCARDTVRGSQCEPRHK 129
>gi|169207532 PREDICTED: similar to hCG2042717 [Homo sapiens]
Length = 218
Score = 49.3 bits (116), Expect = 1e-06
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 34 GTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFL-LRYFSQSDKSQGPQVPPRFSGSKD 92
G ++RL+C + Y ++W +Q PG ++ + + S+K V RF+ S+D
Sbjct: 79 GRSLRLSCAA-SGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRD 137
Query: 93 VARNRGYLSISELQPEDEAMYYCA 116
++N YL ++ L+ ED A+YYCA
Sbjct: 138 NSKNTLYLQMNSLRAEDTAVYYCA 161
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,004,221
Number of Sequences: 37866
Number of extensions: 332200
Number of successful extensions: 1982
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 1772
Number of HSP's gapped (non-prelim): 219
length of query: 145
length of database: 18,247,518
effective HSP length: 92
effective length of query: 53
effective length of database: 14,763,846
effective search space: 782483838
effective search space used: 782483838
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.