Guide to the Human Genome
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Search of human proteins with 94721311

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|94721311 hippocampus abundant transcript-like 1 [Homo
sapiens]
         (506 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|94721311 hippocampus abundant transcript-like 1 [Homo sapiens]    1004   0.0  
gi|39753965 hippocampus abundant transcript 1 [Homo sapiens]          695   0.0  
gi|225703102 major facilitator superfamily domain containing 10 ...    66   8e-11
gi|225703104 major facilitator superfamily domain containing 10 ...    66   8e-11
gi|217416366 major facilitator superfamily domain containing 9 [...    54   3e-07
gi|31543204 proton-coupled folate transporter [Homo sapiens]           49   8e-06
gi|32401447 solute carrier family 46, member 3 isoform a [Homo s...    40   0.005
gi|209571533 solute carrier family 46, member 3 isoform b [Homo ...    40   0.005
gi|46048469 major facilitator superfamily domain containing 6-li...    35   0.16 
gi|23503293 solute carrier family 16, member 11 [Homo sapiens]         34   0.36 
gi|53850574 olfactory receptor, family 5, subfamily U member 1 [...    31   3.0  
gi|4507001 solute carrier family 22 member 2 [Homo sapiens]            30   4.0  
gi|194239645 spinster homolog 3 [Homo sapiens]                         30   4.0  
gi|12232393 major facilitator superfamily domain containing 1 [H...    30   5.2  
gi|73695465 synaptic vesicle glycoprotein 2C [Homo sapiens]            30   6.7  
gi|144953907 major facilitator superfamily domain containing 6 [...    29   8.8  
gi|61635915 membrane-associated transporter protein isoform a [H...    29   8.8  
gi|57222563 colonic and hepatic tumor over-expressed protein iso...    29   8.8  
gi|57164942 colonic and hepatic tumor over-expressed protein iso...    29   8.8  

>gi|94721311 hippocampus abundant transcript-like 1 [Homo sapiens]
          Length = 506

 Score = 1004 bits (2595), Expect = 0.0
 Identities = 506/506 (100%), Positives = 506/506 (100%)

Query: 1   MSVEPPPELEEKAASEPEAGAMPEKRAGAQAAGSTWLQGFGRPSVYHAAIVIFLEFFAWG 60
           MSVEPPPELEEKAASEPEAGAMPEKRAGAQAAGSTWLQGFGRPSVYHAAIVIFLEFFAWG
Sbjct: 1   MSVEPPPELEEKAASEPEAGAMPEKRAGAQAAGSTWLQGFGRPSVYHAAIVIFLEFFAWG 60

Query: 61  LLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFT 120
           LLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFT
Sbjct: 61  LLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFT 120

Query: 121 CFPIPLMRISPWWYFAMISVSGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFAASLV 180
           CFPIPLMRISPWWYFAMISVSGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFAASLV
Sbjct: 121 CFPIPLMRISPWWYFAMISVSGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFAASLV 180

Query: 181 SSPAIGAYLSASYGDSLVVLVATVVALLDICFILVAVPESLPEKMRPVSWGAQISWKQAD 240
           SSPAIGAYLSASYGDSLVVLVATVVALLDICFILVAVPESLPEKMRPVSWGAQISWKQAD
Sbjct: 181 SSPAIGAYLSASYGDSLVVLVATVVALLDICFILVAVPESLPEKMRPVSWGAQISWKQAD 240

Query: 241 PFASLKKVGKDSTVLLICITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIAAFIAMVGIL 300
           PFASLKKVGKDSTVLLICITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIAAFIAMVGIL
Sbjct: 241 PFASLKKVGKDSTVLLICITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIAAFIAMVGIL 300

Query: 301 SIVAQTAFLSILMRSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAGTVAAMSSITFP 360
           SIVAQTAFLSILMRSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAGTVAAMSSITFP
Sbjct: 301 SIVAQTAFLSILMRSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAGTVAAMSSITFP 360

Query: 361 AISALVSRNAESDQQGVAQGIITGIRGLCNGLGPALYGFIFYMFHVELTELGPKLNSNNV 420
           AISALVSRNAESDQQGVAQGIITGIRGLCNGLGPALYGFIFYMFHVELTELGPKLNSNNV
Sbjct: 361 AISALVSRNAESDQQGVAQGIITGIRGLCNGLGPALYGFIFYMFHVELTELGPKLNSNNV 420

Query: 421 PLQGAVIPGPPFLFGACIVLMSFLVALFIPEYSKASGVQKHSNSSSGSLTNTPERGSDED 480
           PLQGAVIPGPPFLFGACIVLMSFLVALFIPEYSKASGVQKHSNSSSGSLTNTPERGSDED
Sbjct: 421 PLQGAVIPGPPFLFGACIVLMSFLVALFIPEYSKASGVQKHSNSSSGSLTNTPERGSDED 480

Query: 481 IEPLLQDSSIWELSSFEEPGNQCTEL 506
           IEPLLQDSSIWELSSFEEPGNQCTEL
Sbjct: 481 IEPLLQDSSIWELSSFEEPGNQCTEL 506


>gi|39753965 hippocampus abundant transcript 1 [Homo sapiens]
          Length = 490

 Score =  695 bits (1794), Expect = 0.0
 Identities = 356/464 (76%), Positives = 397/464 (85%), Gaps = 14/464 (3%)

Query: 38  QGFGRPSVYHAAIVIFLEFFAWGLLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSA 97
           QG G PSVYHA IVIFLEFFAWGLLT P L VLHETF +HTFLMNGLIQGVKGLLSFLSA
Sbjct: 30  QGIGSPSVYHAVIVIFLEFFAWGLLTAPTLVVLHETFPKHTFLMNGLIQGVKGLLSFLSA 89

Query: 98  PLIGALSDVWGRKPFLLGTVFFTCFPIPLMRISPWWYFAMISVSGVFSVTFSVIFAYVAD 157
           PLIGALSDVWGRK FLL TVFFTC PIPLM+ISPWWYFA+ISVSGVF+VTFSV+FAYVAD
Sbjct: 90  PLIGALSDVWGRKSFLLLTVFFTCAPIPLMKISPWWYFAVISVSGVFAVTFSVVFAYVAD 149

Query: 158 VTQEHERSTAYGWVSATFAASLVSSPAIGAYLSASYGDSLVVLVATVVALLDICFILVAV 217
           +TQEHERS AYG VSATFAASLV+SPAIGAYL   YGDSLVV++AT +ALLDICFILVAV
Sbjct: 150 ITQEHERSMAYGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFILVAV 209

Query: 218 PESLPEKMRPVSWGAQISWKQADPFASLKKVGKDSTVLLICITVFLSYLPEAGQYSSFFL 277
           PESLPEKMRP SWGA ISW+QADPFASLKKVG+DS VLLICITVFLSYLPEAGQYSSFFL
Sbjct: 210 PESLPEKMRPASWGAPISWEQADPFASLKKVGQDSIVLLICITVFLSYLPEAGQYSSFFL 269

Query: 278 YLRQVIGFGSVKIAAFIAMVGILSIVAQTAFLSILMRSLGNKNTVLLGLGFQMLQLAWYG 337
           YLRQ++ F    +AAFIA++GILSI+AQT  LS+LMRS+GNKNT+LLGLGFQ+LQLAWYG
Sbjct: 270 YLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSLLMRSIGNKNTILLGLGFQILQLAWYG 329

Query: 338 FGSQAWMMWAAGTVAAMSSITFPAISALVSRNAESDQQGVAQGIITGIRGLCNGLGPALY 397
           FGS+ WMMWAAG VAAMSSITFPA+SALVSR A++DQQGV QG+ITGIRGLCNGLGPALY
Sbjct: 330 FGSEPWMMWAAGAVAAMSSITFPAVSALVSRTADADQQGVVQGMITGIRGLCNGLGPALY 389

Query: 398 GFIFYMFHVELTEL---GPKLNSNNVPL----QGAVIPGPPFLFGACIVLMSFLVALFIP 450
           GFIFY+FHVEL EL   G  L +N  P     Q ++IPGPPFLFGAC VL++ LVALFIP
Sbjct: 390 GFIFYIFHVELKELPITGTDLGTNTSPQHHFEQNSIIPGPPFLFGACSVLLALLVALFIP 449

Query: 451 EYS----KASGVQKHSNSSSGSLTNTPERGSDEDIEPLLQDSSI 490
           E++    ++S  +KH  S S    NT   G  E  EPLLQD+++
Sbjct: 450 EHTNLSLRSSSWRKHCGSHSHP-HNTQAPG--EAKEPLLQDTNV 490


>gi|225703102 major facilitator superfamily domain containing 10
           [Homo sapiens]
          Length = 455

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 80/350 (22%), Positives = 136/350 (38%), Gaps = 35/350 (10%)

Query: 77  HTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVF--FTCFPIPLMRISPWWY 134
           ++ L  GLI     +L FL APL GA SD  GR+P +L  +    T + +     S   +
Sbjct: 84  NSVLFGGLIGSAFSVLQFLCAPLTGATSDCLGRRPVMLLCLMGVATSYAVWATSRSFAAF 143

Query: 135 FAMISVSGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFAASLVSSPAIGAYLSASYG 194
            A   + G+     S+  A VAD+     RS     +   F+      P +GA L     
Sbjct: 144 LASRLIGGISKGNVSLSTAIVADLGSPLARSQGMAVIGVAFSLGFTLGPMLGASLPL--- 200

Query: 195 DSLVVLVATVVALLDICFILVAVPESLP-EKMRP-VSWGAQISWKQADPFASLK----KV 248
             +    A + A  D+ FI   +PE+LP EK  P ++ G + +     P A L+      
Sbjct: 201 -EMAPWFALLFAASDLLFIFCFLPETLPLEKRAPSIALGFRDAADLLSPLALLRFSAVAR 259

Query: 249 GKD-------STVLLICITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIAAFIAMVGILS 301
           G+D       S++  + +  FL     +G   +      Q   F S++      ++G+  
Sbjct: 260 GQDPPSGDRLSSLRRLGLVYFLYLFLFSGLEYTLSFLTHQRFQFSSLQQGKMFFLIGLTM 319

Query: 302 IVAQTAFLSILM--RSLGNKNTVLLGLGFQMLQLAW------YGFGSQAWMMWAAGTVAA 353
              Q A+   +     +      LL L    L + W       G G   +   AA     
Sbjct: 320 ATIQGAYARRIHPGGEVAAVKRALLLLVPAFLLIGWGRSLPVLGLGLLLYSFAAA----- 374

Query: 354 MSSITFPAISALVSRNAESDQQGVAQGIITGIRGLCNGLGPALYGFIFYM 403
              +  P +S++V+      Q+G   G +  +  L    GP +   ++++
Sbjct: 375 ---VVVPCLSSVVAGYGSPGQKGTVMGTLRSLGALARAAGPLVAASVYWL 421


>gi|225703104 major facilitator superfamily domain containing 10
           [Homo sapiens]
          Length = 455

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 80/350 (22%), Positives = 136/350 (38%), Gaps = 35/350 (10%)

Query: 77  HTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVF--FTCFPIPLMRISPWWY 134
           ++ L  GLI     +L FL APL GA SD  GR+P +L  +    T + +     S   +
Sbjct: 84  NSVLFGGLIGSAFSVLQFLCAPLTGATSDCLGRRPVMLLCLMGVATSYAVWATSRSFAAF 143

Query: 135 FAMISVSGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFAASLVSSPAIGAYLSASYG 194
            A   + G+     S+  A VAD+     RS     +   F+      P +GA L     
Sbjct: 144 LASRLIGGISKGNVSLSTAIVADLGSPLARSQGMAVIGVAFSLGFTLGPMLGASLPL--- 200

Query: 195 DSLVVLVATVVALLDICFILVAVPESLP-EKMRP-VSWGAQISWKQADPFASLK----KV 248
             +    A + A  D+ FI   +PE+LP EK  P ++ G + +     P A L+      
Sbjct: 201 -EMAPWFALLFAASDLLFIFCFLPETLPLEKRAPSIALGFRDAADLLSPLALLRFSAVAR 259

Query: 249 GKD-------STVLLICITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIAAFIAMVGILS 301
           G+D       S++  + +  FL     +G   +      Q   F S++      ++G+  
Sbjct: 260 GQDPPSGDRLSSLRRLGLVYFLYLFLFSGLEYTLSFLTHQRFQFSSLQQGKMFFLIGLTM 319

Query: 302 IVAQTAFLSILM--RSLGNKNTVLLGLGFQMLQLAW------YGFGSQAWMMWAAGTVAA 353
              Q A+   +     +      LL L    L + W       G G   +   AA     
Sbjct: 320 ATIQGAYARRIHPGGEVAAVKRALLLLVPAFLLIGWGRSLPVLGLGLLLYSFAAA----- 374

Query: 354 MSSITFPAISALVSRNAESDQQGVAQGIITGIRGLCNGLGPALYGFIFYM 403
              +  P +S++V+      Q+G   G +  +  L    GP +   ++++
Sbjct: 375 ---VVVPCLSSVVAGYGSPGQKGTVMGTLRSLGALARAAGPLVAASVYWL 421


>gi|217416366 major facilitator superfamily domain containing 9
           [Homo sapiens]
          Length = 474

 Score = 54.3 bits (129), Expect = 3e-07
 Identities = 70/307 (22%), Positives = 121/307 (39%), Gaps = 34/307 (11%)

Query: 50  IVIFLEFFAWGLLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGR 109
           +V FL+ F   ++  P+L+ LH      +  + G++    G+L   S+ L+G  SDV GR
Sbjct: 51  LVGFLDLFGVSMVV-PLLS-LHVKSLGASPTVAGIVGSSYGILQLFSSTLVGCWSDVVGR 108

Query: 110 KPFLLGTVFFTCFPIPLMRISPWWYFAMIS--VSGVFSVTFSVIFAYVADVTQEHERSTA 167
           +  LL  +  +     L+  +   +  +++   +G+F  T S+  A ++DV  E ER   
Sbjct: 109 RSSLLACILLSALGYLLLGAATNVFLFVLARVPAGIFKHTLSISRALLSDVVPEKERPLV 168

Query: 168 YGWVSATFAASLVSSPAIGAYLS-ASYGDSLVVLVATVVALLDICFILV---------AV 217
            G  +       +  P +G YL+    G  L   +  +V +L+   +           + 
Sbjct: 169 IGHFNTASGVGFILGPVVGGYLTELEDGFYLTAFICFLVFILNAGLVWFFPWREAKPGST 228

Query: 218 PESLPEKMRPVSWG--------------AQISWKQADPFASLKKVGKDSTVLL------I 257
            + LP +   V  G              A+ S K A P+  +    ++   LL      I
Sbjct: 229 EKGLPLRKTHVLLGRSHDTVQEAATSRRARASKKTAQPWVEVVLALRNMKNLLFSEMWDI 288

Query: 258 CITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIAAFIAMVGILSIVAQTAFLSILMRSLG 317
            +   L  +     YS+F L L +  G         I+   +L  VA  A   IL     
Sbjct: 289 FLVRLLMAMAVMLYYSNFVLALEERFGVRPKVTGYLISYSSMLGAVAGLALGPILRLYKH 348

Query: 318 NKNTVLL 324
           N   +LL
Sbjct: 349 NSQALLL 355


>gi|31543204 proton-coupled folate transporter [Homo sapiens]
          Length = 459

 Score = 49.3 bits (116), Expect = 8e-06
 Identities = 83/356 (23%), Positives = 143/356 (40%), Gaps = 40/356 (11%)

Query: 72  ETFSQH-TFLMNGLIQGVKG-LLSFLSAPLIGALSDVWGRKPFL-------LGTVFFTCF 122
           ET + H T  MN     V G L+   S+ L+GA SD  GR+P L       L     + F
Sbjct: 79  ETLTSHWTLYMN-----VGGFLVGLFSSTLLGAWSDSVGRRPLLVLASLGLLLQALVSVF 133

Query: 123 PIPLMRISPWWYFAMI--SVSGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFA-ASL 179
            + L     ++    I  ++ G F    +  FA VADV+    R+     + A+   A +
Sbjct: 134 VVQLQLHVGYFVLGRILCALLGDFGGLLAASFASVADVSSSRSRTFRMALLEASIGVAGM 193

Query: 180 VSSPAIGAYLSAS-YGDSLVVLVATVVALLDICFILVAVPESLPEKMRPVSWGAQISWKQ 238
           ++S   G +L A  Y +   + +A ++A+              P+  R  ++    S  Q
Sbjct: 194 LASLLGGHWLRAQGYANPFWLALALLIAMTLYAAFCFGETLKEPKSTRLFTFRHHRSIVQ 253

Query: 239 A----DPFASLKKVGKDSTVLLICITVFLSYLPEAGQY--SSFFLYLRQVIGFGSVKIAA 292
                 P  S K +   S  + + ITV          Y  S+   +  ++IG+GS    A
Sbjct: 254 LYVAPAPEKSRKHLALYSLAIFVVITVHFGAQDILTLYELSTPLCWDSKLIGYGS----A 309

Query: 293 FIAMVGILSIVAQTAFLSILMRSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAGTVA 352
              +  + S++A    L +L   L +     +GL F +L +  + F +   +M+    + 
Sbjct: 310 AQHLPYLTSLLA----LKLLQYCLADAWVAEIGLAFNILGMVVFAFATITPLMFTGYGLL 365

Query: 353 AMSSITFPAISALVSRNAESDQQGVAQGIITGIR--------GLCNGLGPALYGFI 400
            +S +  P I A +S+     +QG     +  +         G+ N L PA   F+
Sbjct: 366 FLSLVITPVIRAKLSKLVRETEQGALFSAVACVNSLAMLTASGIFNSLYPATLNFM 421


>gi|32401447 solute carrier family 46, member 3 isoform a [Homo
           sapiens]
          Length = 461

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 76/327 (23%), Positives = 133/327 (40%), Gaps = 53/327 (16%)

Query: 81  MNGLIQGVKGLLSFLSAPLIGALSDVWGRK-PFLLGTV------------FFTCFPIPLM 127
           ++GLI G+      LS      +SD +GRK P +L +V             +  FP  L+
Sbjct: 78  ISGLIPGLVSTFILLS------ISDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLL 131

Query: 128 RISPWWYFAMISVSGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFAASLVS--SPAI 185
             S +    + +  G ++  +   FAY+ D  +EH++ T    +   F   LV+  +   
Sbjct: 132 IASTF----IGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAI-IDFLLGLVTGLTGLS 186

Query: 186 GAYLSASYG---DSLVVLVATVVALLDICFIL---------VAVPESLPEKMRPVSWGAQ 233
             Y     G     L++ V+  V L+ I F L           V  S  E  + + +   
Sbjct: 187 SGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYRTY 246

Query: 234 ISWKQADPFASLKKVGKDSTVL-LICITVFLSYLPEAGQYSSFFLY-LRQVIGFGSVKIA 291
           + +K A         GK   +L L+  TV   +    G    F LY L   + +  V I 
Sbjct: 247 MLFKNAS--------GKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIG 298

Query: 292 AFIAMVGILSIVAQTAFLSILMRS--LGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAG 349
            + + +G  S +  T+FL I + S  + + +   +G+   M  +A   F S   MM+ A 
Sbjct: 299 -YGSALGSASFL--TSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLAR 355

Query: 350 TVAAMSSITFPAISALVSRNAESDQQG 376
                + + F  + +++S+   S +QG
Sbjct: 356 VPFLFTIVPFSVLRSMLSKVVRSTEQG 382


>gi|209571533 solute carrier family 46, member 3 isoform b [Homo
           sapiens]
          Length = 463

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 76/327 (23%), Positives = 133/327 (40%), Gaps = 53/327 (16%)

Query: 81  MNGLIQGVKGLLSFLSAPLIGALSDVWGRK-PFLLGTV------------FFTCFPIPLM 127
           ++GLI G+      LS      +SD +GRK P +L +V             +  FP  L+
Sbjct: 78  ISGLIPGLVSTFILLS------ISDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLL 131

Query: 128 RISPWWYFAMISVSGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFAASLVS--SPAI 185
             S +    + +  G ++  +   FAY+ D  +EH++ T    +   F   LV+  +   
Sbjct: 132 IASTF----IGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAI-IDFLLGLVTGLTGLS 186

Query: 186 GAYLSASYG---DSLVVLVATVVALLDICFIL---------VAVPESLPEKMRPVSWGAQ 233
             Y     G     L++ V+  V L+ I F L           V  S  E  + + +   
Sbjct: 187 SGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCSEGFKNLFYRTY 246

Query: 234 ISWKQADPFASLKKVGKDSTVL-LICITVFLSYLPEAGQYSSFFLY-LRQVIGFGSVKIA 291
           + +K A         GK   +L L+  TV   +    G    F LY L   + +  V I 
Sbjct: 247 MLFKNAS--------GKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIG 298

Query: 292 AFIAMVGILSIVAQTAFLSILMRS--LGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAG 349
            + + +G  S +  T+FL I + S  + + +   +G+   M  +A   F S   MM+ A 
Sbjct: 299 -YGSALGSASFL--TSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLAR 355

Query: 350 TVAAMSSITFPAISALVSRNAESDQQG 376
                + + F  + +++S+   S +QG
Sbjct: 356 VPFLFTIVPFSVLRSMLSKVVRSTEQG 382


>gi|46048469 major facilitator superfamily domain containing 6-like
           [Homo sapiens]
          Length = 586

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 24/209 (11%)

Query: 193 YGDSLVVLVATVVALLDICFILVAVPESLPEKMRPVSWGAQISWKQADPFASLKKVGKDS 252
           YG S+V  +A +V+        +A P  + ++  P       S+K+     +L  VG D 
Sbjct: 325 YGYSVVSTLALLVS--------IAFPIPICQQWEP-------SYKRVK---ALSIVGGDP 366

Query: 253 TVLLICITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIAAFIAMVGILSIVAQTAFLSIL 312
            ++L+  T  L     +   +  F +++   G G + +  F   + +L  +    F + L
Sbjct: 367 HLILLASTTVLVGAIVSTVQNFLFWHMKDH-GSGEL-VMGFSVALSLLGEILLHPFKATL 424

Query: 313 MRSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAGTVAAMSSITFPAISALVSRNAES 372
           +R L     V LGL     QL +Y F    W  W+   +  +S+I+  A+   V  + E 
Sbjct: 425 LRKLSRTGLVGLGLSCLAGQLLYYSF---LWSWWSVLPIQILSAISNRALWWAVGASVED 481

Query: 373 DQQGVAQGIITGI-RGLCNGLGPALYGFI 400
                 +  ++ + RG   G G +L  F+
Sbjct: 482 LATPRMERALSALFRGHFYGSGCSLGSFV 510


>gi|23503293 solute carrier family 16, member 11 [Homo sapiens]
          Length = 471

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 21/58 (36%), Positives = 26/58 (44%)

Query: 57  FAWGLLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLL 114
           F W L+  P L  L   FS+   L  GL     G  S L AP +  L D +G +  LL
Sbjct: 141 FGWALVFAPALGTLSRYFSRRRVLAVGLALTGNGASSLLLAPALQLLLDTFGWRGALL 198


>gi|53850574 olfactory receptor, family 5, subfamily U member 1
           [Homo sapiens]
          Length = 321

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 14/52 (26%)

Query: 188 YLSASYGDSLVVLVATV--------------VALLDICFILVAVPESLPEKM 225
           YL A  G+ L++ + TV              ++LLD+CFI V VP+S+   +
Sbjct: 33  YLLALTGNLLIITIITVDRRLHSPMYYFLKHLSLLDLCFISVTVPQSIANSL 84


>gi|4507001 solute carrier family 22 member 2 [Homo sapiens]
          Length = 555

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 15/127 (11%)

Query: 81  MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLMRISPWWYFAMISV 140
           M  L Q    +  F+ +  IG ++D +GRK  LL TV        LM ISP         
Sbjct: 148 MLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGVLMAISP--------- 198

Query: 141 SGVFSVTFSVIFAYVADVTQEHERSTAYGWVSATFAASLVSSPAIGAYLSASYGDSLVVL 200
               + T+ +IF  +  +    +     G++  T          +G +   +Y   L+VL
Sbjct: 199 ----TYTWMLIFRLIQGLVS--KAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVL 252

Query: 201 VATVVAL 207
                AL
Sbjct: 253 AGVAYAL 259


>gi|194239645 spinster homolog 3 [Homo sapiens]
          Length = 512

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 10/114 (8%)

Query: 46  YHAAIVI----FLEFFAWGLLTTPMLTVLHETFSQHTFLMNGLIQGVKGLLSFLSAPLIG 101
           Y AA V+     L +  W ++   +L +  E F Q +    GL+Q V      LSAP+ G
Sbjct: 45  YVAAAVLCYINLLNYMNWFIIAGVLLDI-QEVF-QISDNHAGLLQTVFVSCLLLSAPVFG 102

Query: 102 ALSDVWGRKPFL-LGTVFFTCFPIPLMRISP---WWYFAMISVSGVFSVTFSVI 151
            L D   RK  +  G + ++   +    ISP   W +F    + G  S ++S I
Sbjct: 103 YLGDRHSRKATMSFGILLWSGAGLSSSFISPRYSWLFFLSRGIVGTGSASYSTI 156


>gi|12232393 major facilitator superfamily domain containing 1 [Homo
           sapiens]
          Length = 465

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 85  IQGVKGLLSFLSAPLIGALSDVWGRKP-FLLGTVFFTCFPIPLMRISPWW-YFAMISVSG 142
           I  V  ++S   +P+ G L D  G+   ++L  V  T     ++  + W  + AM  +  
Sbjct: 305 INSVVYVISAPMSPVFGLLVDKTGKNIIWVLCAVAATLVSHMMLAFTMWNPWIAMCLLGL 364

Query: 143 VFSVTFSVIFAYVADVTQEHERSTAYGWVSA 173
            +S+    ++  VA V  EH+  TAYG++ +
Sbjct: 365 SYSLLACALWPMVAFVVPEHQLGTAYGFMQS 395


>gi|73695465 synaptic vesicle glycoprotein 2C [Homo sapiens]
          Length = 727

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 3/42 (7%)

Query: 247 KVGKDSTVLLICITV--FLSYLPEAGQYSSFFLYLRQVIGFG 286
           KVG+  + LLIC++V  F ++L    Q   FFL+ R + GFG
Sbjct: 214 KVGRKQS-LLICMSVNGFFAFLSSFVQGYGFFLFCRLLSGFG 254


>gi|144953907 major facilitator superfamily domain containing 6
           [Homo sapiens]
          Length = 791

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 35/164 (21%), Positives = 64/164 (39%), Gaps = 26/164 (15%)

Query: 271 QYSSFFLYLRQVIGFGSVKIAAFI-----------AMVGILSIVAQTAFLSI------LM 313
           QY S  L++   +GFG   +  F+            + G+ S+++  + L+       L+
Sbjct: 446 QYGSV-LFVAWFMGFGYGFVFTFLYWHLEDLNGTTTLFGVCSVLSHVSELTAYFFSHKLI 504

Query: 314 RSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMMWAAG-----TVAAMSSITFPAISALVSR 368
             +G+   + +GL     +  +  +   AW +         T AA+ +     +SA V  
Sbjct: 505 ELIGHIRVLYIGLACNTARYIYISYLENAWTVLPMEVLQGVTHAAIWAACISYLSAAVPP 564

Query: 369 NAESDQQGVAQGIITGIRGLCNGLGPALYGFIFYMFHVELTELG 412
              +  QG+ QG+     GL  G G  + G +   F    T  G
Sbjct: 565 ELRTSAQGILQGLHL---GLGRGCGAMIGGVLVNYFGAAATFRG 605


>gi|61635915 membrane-associated transporter protein isoform a [Homo
           sapiens]
          Length = 530

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 15/120 (12%)

Query: 112 FLLGTVFFTCFPIPLMRISPWWYFAMISVSGVFSVTFSVIFAYVADVTQEHERSTA---- 167
           F LGT F   FP     +     F ++S S +++V F++I  Y  +  +E +++      
Sbjct: 408 FGLGTGFIGLFPNVYSTLVLCSLFGVMS-STLYTVPFNLITEYHREEEKERQQAPGGDPD 466

Query: 168 -----YGWVSATFA-----ASLVSSPAIGAYLSASYGDSLVVLVATVVALLDICFILVAV 217
                 G   AT       A ++    +G  ++ +    +VV+ A+ VAL+  CF+ + V
Sbjct: 467 NSVRGKGMDCATLTCMVQLAQILVGGGLGFLVNTAGTVVVVVITASAVALIGCCFVALFV 526


>gi|57222563 colonic and hepatic tumor over-expressed protein isoform
            b [Homo sapiens]
          Length = 1972

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 448  FIPEYSKASGVQKHSNSSSGSLTNTPERGSDEDIEPLLQDSSIWELSSFEEPGNQCTEL 506
            F+ E  K  G ++++      L    ++ SD DIEP L++SS +   S+ E G +  E+
Sbjct: 1772 FLAEIFKKIGSKENTKEGLAELYEYKKKYSDADIEPFLKNSSQF-FQSYVERGLRVIEM 1829


>gi|57164942 colonic and hepatic tumor over-expressed protein isoform
            a [Homo sapiens]
          Length = 2032

 Score = 29.3 bits (64), Expect = 8.8
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 448  FIPEYSKASGVQKHSNSSSGSLTNTPERGSDEDIEPLLQDSSIWELSSFEEPGNQCTEL 506
            F+ E  K  G ++++      L    ++ SD DIEP L++SS +   S+ E G +  E+
Sbjct: 1832 FLAEIFKKIGSKENTKEGLAELYEYKKKYSDADIEPFLKNSSQF-FQSYVERGLRVIEM 1889


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,878,648
Number of Sequences: 37866
Number of extensions: 806487
Number of successful extensions: 2371
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2339
Number of HSP's gapped (non-prelim): 24
length of query: 506
length of database: 18,247,518
effective HSP length: 107
effective length of query: 399
effective length of database: 14,195,856
effective search space: 5664146544
effective search space used: 5664146544
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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