Guide to the Human Genome
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Name: MFSD6L Sequence: fasta or formatted (586aa) NCBI GI: 46048469
Description:

major facilitator superfamily domain containing 6-like

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         52           2
 C cysteine            1.9         11           2
 D aspartate           3.4         20           2
 E glutamate           4.1         24           2
 F phenylalanine       4.4         26           1
 G glycine             8.2         48           2
 H histidine           2.4         14           1
 I isoleucine          3.1         18           1
 K lysine              3.4         20           1
 L leucine            15.5         91           3
 M methionine          2.0         12           1
 N asparagine          1.5          9           1
 P proline             4.9         29           2
 Q glutamine           2.4         14           2
 R arginine            5.5         32           2
 S serine              9.4         55           2
 T threonine           5.3         31           2
 V valine              8.5         50           2
 W tryptophan          2.9         17           2
 Y tyrosine            2.2         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   major facilitator superfamily domain containing 6-li... 
MFSD6                 0.061   major facilitator superfamily domain containing 6 [...
HIATL1                0.009   hippocampus abundant transcript-like 1 
HIAT1                 0.008   hippocampus abundant transcript 1 
PHF2                  0.006   PHD finger protein 2 
LOC100128430          0.005   PREDICTED: similar to hCG2012058 
CASC5                 0.004   cancer susceptibility candidate 5 isoform 2 
CASC5                 0.004   cancer susceptibility candidate 5 isoform 1 
SFTA3                 0.004   surfactant associated 3 
DGCR8                 0.004   DiGeorge syndrome critical region gene 8 
PTCHD2                0.004   patched domain containing 2 
LOC441239             0.004   PREDICTED: hypothetical protein LOC441239 
LOC441239             0.004   PREDICTED: hypothetical protein LOC441239 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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