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Search of human proteins with 93277113
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|93277113 GTP_binding protein [Homo sapiens]
(334 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|93277113 GTP_binding protein [Homo sapiens] 671 0.0
gi|9506611 guanine nucleotide binding protein-like 3 (nucleolar)... 78 1e-14
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ... 61 1e-09
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ... 61 1e-09
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ... 61 1e-09
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)... 53 4e-07
gi|56549640 septin 2 [Homo sapiens] 38 0.011
gi|56549638 septin 2 [Homo sapiens] 38 0.011
gi|56549636 septin 2 [Homo sapiens] 38 0.011
gi|4758158 septin 2 [Homo sapiens] 38 0.011
gi|223029424 large subunit GTPase 1 [Homo sapiens] 37 0.032
gi|4758942 septin 4 isoform 1 [Homo sapiens] 36 0.042
gi|17986247 septin 4 isoform 3 [Homo sapiens] 36 0.042
gi|17986245 septin 4 isoform 2 [Homo sapiens] 36 0.042
gi|193082993 GTP binding protein 3 (mitochondrial) isoform III [... 36 0.042
gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Ho... 36 0.042
gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [H... 36 0.042
gi|164698504 septin 9 isoform f [Homo sapiens] 36 0.055
gi|164698502 septin 9 isoform d [Homo sapiens] 36 0.055
gi|164698500 septin 9 isoform e [Homo sapiens] 36 0.055
gi|164698498 septin 9 isoform b [Homo sapiens] 36 0.055
gi|164698496 septin 9 isoform e [Homo sapiens] 36 0.055
gi|164698494 septin 9 isoform a [Homo sapiens] 36 0.055
gi|116256489 septin 9 isoform c [Homo sapiens] 36 0.055
gi|24307899 Era-like 1 [Homo sapiens] 36 0.055
gi|38788319 guanine nucleotide binding protein-like 1 [Homo sapi... 35 0.072
gi|148352331 cell division cycle 10 isoform 1 [Homo sapiens] 34 0.16
gi|148352329 cell division cycle 10 isoform 2 [Homo sapiens] 34 0.16
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 33 0.27
gi|9945439 septin 5 [Homo sapiens] 33 0.27
>gi|93277113 GTP_binding protein [Homo sapiens]
Length = 334
Score = 671 bits (1730), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MRLTPRALCSAAQAAWRENFPLCGRDVARWFPGHMAKGLKKMQSSLKLVDCIIEVHDARI 60
MRLTPRALCSAAQAAWRENFPLCGRDVARWFPGHMAKGLKKMQSSLKLVDCIIEVHDARI
Sbjct: 1 MRLTPRALCSAAQAAWRENFPLCGRDVARWFPGHMAKGLKKMQSSLKLVDCIIEVHDARI 60
Query: 61 PLSGRNPLFQETLGLKPHLLVLNKMDLADLTEQQKIMQHLEGEGLKNVIFTNCVKDENVK 120
PLSGRNPLFQETLGLKPHLLVLNKMDLADLTEQQKIMQHLEGEGLKNVIFTNCVKDENVK
Sbjct: 61 PLSGRNPLFQETLGLKPHLLVLNKMDLADLTEQQKIMQHLEGEGLKNVIFTNCVKDENVK 120
Query: 121 QIIPMVTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEP 180
QIIPMVTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEP
Sbjct: 121 QIIPMVTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEP 180
Query: 181 GITRAVMSKIQVSERPLMFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYL 240
GITRAVMSKIQVSERPLMFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYL
Sbjct: 181 GITRAVMSKIQVSERPLMFLLDTPGVLAPRIESVETGLKLALCGTVLDHLVGEETMADYL 240
Query: 241 LYTLNKHQRFGYVQHYGLGSACDNVERVLKSVAVKLGKTQKVKVLTGTGNVNIIQPNYPA 300
LYTLNKHQRFGYVQHYGLGSACDNVERVLKSVAVKLGKTQKVKVLTGTGNVNIIQPNYPA
Sbjct: 241 LYTLNKHQRFGYVQHYGLGSACDNVERVLKSVAVKLGKTQKVKVLTGTGNVNIIQPNYPA 300
Query: 301 AARDFLQTFRRGLLGSVMLDLDVLRGHPPAETLP 334
AARDFLQTFRRGLLGSVMLDLDVLRGHPPAETLP
Sbjct: 301 AARDFLQTFRRGLLGSVMLDLDVLRGHPPAETLP 334
>gi|9506611 guanine nucleotide binding protein-like 3
(nucleolar)-like [Homo sapiens]
Length = 582
Score = 78.2 bits (191), Expect = 1e-14
Identities = 83/270 (30%), Positives = 128/270 (47%), Gaps = 48/270 (17%)
Query: 40 KKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETL----GLKPHLLVLNKMDLADLTEQQK 95
K+ + ++ D I+EV DAR PL R +E + G K +LVLNK+DL +K
Sbjct: 126 KEFRKVVEYSDVILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVLVLNKIDLVPKEVVEK 185
Query: 96 IMQHLEGEGLKNVIFTNCVKDENVKQI------IPMVTELIGRSHRYHRKENL-----EY 144
+ +L E L V F + + VK + + +E + +S ENL Y
Sbjct: 186 WLDYLRNE-LPTVAFKASTQHQ-VKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNY 243
Query: 145 C----------IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSE 194
C + V+G+PNVGKSSLINSL+R +A VG PGIT+ M ++ + +
Sbjct: 244 CRLGEVRTHIRVGVVGLPNVGKSSLINSLKR-----SRACSVGAVPGITK-FMQEVYLDK 297
Query: 195 RPLMFLLDTPGVL-APRIESVETGLKLALCGTVLDHLVGEETMADYL--LYTLNKHQRFG 251
+ LLD PG++ P E GT+L + V + +AD + + T+ +
Sbjct: 298 --FIRLLDAPGIVPGPNSE----------VGTILRNCVHVQKLADPVTPVETILQRCNLE 345
Query: 252 YVQHYGLGSACDNVERVLKSVAVKLGKTQK 281
+ +Y S E L +VA +LGK +K
Sbjct: 346 EISNYYGVSGFQTTEHFLTAVAHRLGKKKK 375
>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 61.2 bits (147), Expect = 1e-09
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 29/194 (14%)
Query: 40 KKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETL---GLKPHLLVLNKMDLADLTEQQKI 96
++++ ++ D ++EV DAR PL R P +E + G K +L+LNK DL +
Sbjct: 120 QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESW 179
Query: 97 MQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIG----RSHRYHRKENL--------EY 144
+ +L+ E L V+F K ++ +I V RS KE L E
Sbjct: 180 LNYLKKE-LPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQET 238
Query: 145 C-----IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMF 199
C + VIG PNVGKSS+INSL+++ + VG G+TR+ M + + ++ +
Sbjct: 239 CSKAIRVGVIGFPNVGKSSIINSLKQEQM-----CNVGVSMGLTRS-MQVVPLDKQ--IT 290
Query: 200 LLDTPGVLAPRIES 213
++D+P + + S
Sbjct: 291 IIDSPSFIVSPLNS 304
>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 61.2 bits (147), Expect = 1e-09
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 29/194 (14%)
Query: 40 KKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETL---GLKPHLLVLNKMDLADLTEQQKI 96
++++ ++ D ++EV DAR PL R P +E + G K +L+LNK DL +
Sbjct: 120 QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESW 179
Query: 97 MQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIG----RSHRYHRKENL--------EY 144
+ +L+ E L V+F K ++ +I V RS KE L E
Sbjct: 180 LNYLKKE-LPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQET 238
Query: 145 C-----IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMF 199
C + VIG PNVGKSS+INSL+++ + VG G+TR+ M + + ++ +
Sbjct: 239 CSKAIRVGVIGFPNVGKSSIINSLKQEQM-----CNVGVSMGLTRS-MQVVPLDKQ--IT 290
Query: 200 LLDTPGVLAPRIES 213
++D+P + + S
Sbjct: 291 IIDSPSFIVSPLNS 304
>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
[Homo sapiens]
Length = 549
Score = 61.2 bits (147), Expect = 1e-09
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 29/194 (14%)
Query: 40 KKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETL---GLKPHLLVLNKMDLADLTEQQKI 96
++++ ++ D ++EV DAR PL R P +E + G K +L+LNK DL +
Sbjct: 132 QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESW 191
Query: 97 MQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIG----RSHRYHRKENL--------EY 144
+ +L+ E L V+F K ++ +I V RS KE L E
Sbjct: 192 LNYLKKE-LPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQET 250
Query: 145 C-----IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMF 199
C + VIG PNVGKSS+INSL+++ + VG G+TR+ M + + ++ +
Sbjct: 251 CSKAIRVGVIGFPNVGKSSIINSLKQEQM-----CNVGVSMGLTRS-MQVVPLDKQ--IT 302
Query: 200 LLDTPGVLAPRIES 213
++D+P + + S
Sbjct: 303 IIDSPSFIVSPLNS 316
>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
[Homo sapiens]
Length = 731
Score = 52.8 bits (125), Expect = 4e-07
Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 23/236 (9%)
Query: 50 DCIIEVHDARIPLSGRNPLFQETLGL-KP--HLL-VLNKMDLADLTEQQKIMQHLEGEGL 105
D +++V DAR P+ R+P + L KP HL+ VLNK DL ++ + L +
Sbjct: 218 DVVVQVLDARDPMGTRSPHIETYLKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLS-QDY 276
Query: 106 KNVIFTNCVKDENVKQIIPMVTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRR 165
+ F + + K + G+ H ++ ++ + IG PNVGKSS+IN+LR
Sbjct: 277 PTLAFHASLTNPFGKGAFIQLLRQFGKLHTDKKQISVGF----IGYPNVGKSSVINTLRS 332
Query: 166 QHLRKGKATRVGGEPGITRAVMSKIQVSERPLMFLLDTPGVLAPRIESVETGLKLALCGT 225
+ K V G T+ V I + R +FL+D PGV+ P S ++ + L G
Sbjct: 333 K-----KVCNVAPIAGETK-VWQYITLMRR--IFLIDCPGVVYP---SEDSETDIVLKGV 381
Query: 226 VLDHLVGEETMADYLLYTLNKHQRFGYVQHYGLGSACDNVERVLKSVAVKLGKTQK 281
V + ++ D++ L + + + Y + S +N E L+ +A + GK K
Sbjct: 382 VQVEKI--KSPEDHIGAVLERAKPEYISKTYKIDS-WENAEDFLEKLAFRTGKLLK 434
>gi|56549640 septin 2 [Homo sapiens]
Length = 361
Score = 38.1 bits (87), Expect = 0.011
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 134 HRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVM---SKI 190
HR K+ E+ +MV+G +GKS+LINSL L + G I R V S +
Sbjct: 28 HRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERVI-PGAAEKIERTVQIEASTV 86
Query: 191 QVSERPL---MFLLDTPG 205
++ ER + + ++DTPG
Sbjct: 87 EIEERGVKLRLTVVDTPG 104
>gi|56549638 septin 2 [Homo sapiens]
Length = 361
Score = 38.1 bits (87), Expect = 0.011
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 134 HRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVM---SKI 190
HR K+ E+ +MV+G +GKS+LINSL L + G I R V S +
Sbjct: 28 HRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERVI-PGAAEKIERTVQIEASTV 86
Query: 191 QVSERPL---MFLLDTPG 205
++ ER + + ++DTPG
Sbjct: 87 EIEERGVKLRLTVVDTPG 104
>gi|56549636 septin 2 [Homo sapiens]
Length = 361
Score = 38.1 bits (87), Expect = 0.011
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 134 HRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVM---SKI 190
HR K+ E+ +MV+G +GKS+LINSL L + G I R V S +
Sbjct: 28 HRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERVI-PGAAEKIERTVQIEASTV 86
Query: 191 QVSERPL---MFLLDTPG 205
++ ER + + ++DTPG
Sbjct: 87 EIEERGVKLRLTVVDTPG 104
>gi|4758158 septin 2 [Homo sapiens]
Length = 361
Score = 38.1 bits (87), Expect = 0.011
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 134 HRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVM---SKI 190
HR K+ E+ +MV+G +GKS+LINSL L + G I R V S +
Sbjct: 28 HRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERVI-PGAAEKIERTVQIEASTV 86
Query: 191 QVSERPL---MFLLDTPG 205
++ ER + + ++DTPG
Sbjct: 87 EIEERGVKLRLTVVDTPG 104
>gi|223029424 large subunit GTPase 1 [Homo sapiens]
Length = 658
Score = 36.6 bits (83), Expect = 0.032
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 128 ELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVM 187
EL H + ++ + + ++G PNVGKSS IN+ + K V PG T+
Sbjct: 371 ELFKELHTGRKVKDGQLTVGLVGYPNVGKSSTINT-----IMGNKKVSVSATPGHTKHFQ 425
Query: 188 SKIQVSERPLMFLLDTPGVLAPRIESVE 215
+ + P + L D PG++ P S +
Sbjct: 426 T---LYVEPGLCLCDCPGLVMPSFVSTK 450
>gi|4758942 septin 4 isoform 1 [Homo sapiens]
Length = 478
Score = 36.2 bits (82), Expect = 0.042
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 117 ENVKQIIPMVTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINS-----LRRQHLRKG 171
E+ K+ + T L + HR K+ ++ +MV G +GKS+L+NS L R G
Sbjct: 119 EDDKEYVGFAT-LPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDLYRDRKLLG 177
Query: 172 KATRVGGEPGITRAVMSKIQVSERPLMFLLDTPG 205
R+ IT+ + + R + ++DTPG
Sbjct: 178 AEERIMQTVEITKHAVDIEEKGVRLRLTIVDTPG 211
>gi|17986247 septin 4 isoform 3 [Homo sapiens]
Length = 459
Score = 36.2 bits (82), Expect = 0.042
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 117 ENVKQIIPMVTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINS-----LRRQHLRKG 171
E+ K+ + T L + HR K+ ++ +MV G +GKS+L+NS L R G
Sbjct: 100 EDDKEYVGFAT-LPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDLYRDRKLLG 158
Query: 172 KATRVGGEPGITRAVMSKIQVSERPLMFLLDTPG 205
R+ IT+ + + R + ++DTPG
Sbjct: 159 AEERIMQTVEITKHAVDIEEKGVRLRLTIVDTPG 192
>gi|17986245 septin 4 isoform 2 [Homo sapiens]
Length = 274
Score = 36.2 bits (82), Expect = 0.042
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 117 ENVKQIIPMVTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINS-----LRRQHLRKG 171
E+ K+ + T L + HR K+ ++ +MV G +GKS+L+NS L R G
Sbjct: 100 EDDKEYVGFAT-LPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVNSLFLTDLYRDRKLLG 158
Query: 172 KATRVGGEPGITRAVMSKIQVSERPLMFLLDTPG 205
R+ IT+ + + R + ++DTPG
Sbjct: 159 AEERIMQTVEITKHAVDIEEKGVRLRLTIVDTPG 192
>gi|193082993 GTP binding protein 3 (mitochondrial) isoform III
[Homo sapiens]
Length = 471
Score = 36.2 bits (82), Expect = 0.042
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVM-SKIQVSERPLMFLLDTP 204
++V G PN GKSSL+N L R+ + V EPG TR V+ + + ++ P++ L DT
Sbjct: 252 VVVTGPPNAGKSSLVNLLSRK-----PVSIVSPEPGTTRDVLETPVDLAGFPVL-LSDTA 305
Query: 205 GV 206
G+
Sbjct: 306 GL 307
>gi|193082991 GTP binding protein 3 (mitochondrial) isoform V [Homo
sapiens]
Length = 492
Score = 36.2 bits (82), Expect = 0.042
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVM-SKIQVSERPLMFLLDTP 204
++V G PN GKSSL+N L R+ + V EPG TR V+ + + ++ P++ L DT
Sbjct: 252 VVVTGPPNAGKSSLVNLLSRK-----PVSIVSPEPGTTRDVLETPVDLAGFPVL-LSDTA 305
Query: 205 GV 206
G+
Sbjct: 306 GL 307
>gi|193082988 GTP binding protein 3 (mitochondrial) isoform IV [Homo
sapiens]
Length = 524
Score = 36.2 bits (82), Expect = 0.042
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVM-SKIQVSERPLMFLLDTP 204
++V G PN GKSSL+N L R+ + V EPG TR V+ + + ++ P++ L DT
Sbjct: 284 VVVTGPPNAGKSSLVNLLSRK-----PVSIVSPEPGTTRDVLETPVDLAGFPVL-LSDTA 337
Query: 205 GV 206
G+
Sbjct: 338 GL 339
>gi|164698504 septin 9 isoform f [Homo sapiens]
Length = 335
Score = 35.8 bits (81), Expect = 0.055
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 126 VTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRA 185
+ ++ + R K+ E+ IMV+G +GKS+LIN+L + + + K+ + E I +
Sbjct: 30 IDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISR-KSVQPTSEERIPKT 88
Query: 186 VMSKI------QVSERPLMFLLDTPG 205
+ K + R + ++DTPG
Sbjct: 89 IEIKSITHDIEEKGVRMKLTVIDTPG 114
>gi|164698502 septin 9 isoform d [Homo sapiens]
Length = 474
Score = 35.8 bits (81), Expect = 0.055
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 126 VTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRA 185
+ ++ + R K+ E+ IMV+G +GKS+LIN+L + + + K+ + E I +
Sbjct: 169 IDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISR-KSVQPTSEERIPKT 227
Query: 186 VMSKI------QVSERPLMFLLDTPG 205
+ K + R + ++DTPG
Sbjct: 228 IEIKSITHDIEEKGVRMKLTVIDTPG 253
>gi|164698500 septin 9 isoform e [Homo sapiens]
Length = 422
Score = 35.8 bits (81), Expect = 0.055
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 126 VTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRA 185
+ ++ + R K+ E+ IMV+G +GKS+LIN+L + + + K+ + E I +
Sbjct: 117 IDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISR-KSVQPTSEERIPKT 175
Query: 186 VMSKI------QVSERPLMFLLDTPG 205
+ K + R + ++DTPG
Sbjct: 176 IEIKSITHDIEEKGVRMKLTVIDTPG 201
>gi|164698498 septin 9 isoform b [Homo sapiens]
Length = 579
Score = 35.8 bits (81), Expect = 0.055
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 126 VTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRA 185
+ ++ + R K+ E+ IMV+G +GKS+LIN+L + + + K+ + E I +
Sbjct: 274 IDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISR-KSVQPTSEERIPKT 332
Query: 186 VMSKI------QVSERPLMFLLDTPG 205
+ K + R + ++DTPG
Sbjct: 333 IEIKSITHDIEEKGVRMKLTVIDTPG 358
>gi|164698496 septin 9 isoform e [Homo sapiens]
Length = 422
Score = 35.8 bits (81), Expect = 0.055
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 126 VTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRA 185
+ ++ + R K+ E+ IMV+G +GKS+LIN+L + + + K+ + E I +
Sbjct: 117 IDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISR-KSVQPTSEERIPKT 175
Query: 186 VMSKI------QVSERPLMFLLDTPG 205
+ K + R + ++DTPG
Sbjct: 176 IEIKSITHDIEEKGVRMKLTVIDTPG 201
>gi|164698494 septin 9 isoform a [Homo sapiens]
Length = 586
Score = 35.8 bits (81), Expect = 0.055
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 126 VTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRA 185
+ ++ + R K+ E+ IMV+G +GKS+LIN+L + + + K+ + E I +
Sbjct: 281 IDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISR-KSVQPTSEERIPKT 339
Query: 186 VMSKI------QVSERPLMFLLDTPG 205
+ K + R + ++DTPG
Sbjct: 340 IEIKSITHDIEEKGVRMKLTVIDTPG 365
>gi|116256489 septin 9 isoform c [Homo sapiens]
Length = 568
Score = 35.8 bits (81), Expect = 0.055
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 126 VTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRA 185
+ ++ + R K+ E+ IMV+G +GKS+LIN+L + + + K+ + E I +
Sbjct: 263 IDSILEQMRRKAMKQGFEFNIMVVGQSGLGKSTLINTLFKSKISR-KSVQPTSEERIPKT 321
Query: 186 VMSKI------QVSERPLMFLLDTPG 205
+ K + R + ++DTPG
Sbjct: 322 IEIKSITHDIEEKGVRMKLTVIDTPG 347
>gi|24307899 Era-like 1 [Homo sapiens]
Length = 437
Score = 35.8 bits (81), Expect = 0.055
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMFLLDTPG 205
++++G PN GKS+L N L + K V + TR + + + LLDTPG
Sbjct: 116 VVLLGAPNAGKSTLSNQLLGR-----KVFPVSRKVHTTRCQALGVITEKETQVILLDTPG 170
Query: 206 VLAP 209
+++P
Sbjct: 171 IISP 174
>gi|38788319 guanine nucleotide binding protein-like 1 [Homo
sapiens]
Length = 607
Score = 35.4 bits (80), Expect = 0.072
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Query: 149 IGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMFLLDTPGVLA 208
+G PNVGKSSLIN L + K V PG TR + P + L D PG++
Sbjct: 366 VGFPNVGKSSLINGLVGR-----KVVSVSRTPGHTRYFQTYFLT---PSVKLCDCPGLIF 417
Query: 209 PRI 211
P +
Sbjct: 418 PSL 420
>gi|148352331 cell division cycle 10 isoform 1 [Homo sapiens]
Length = 437
Score = 34.3 bits (77), Expect = 0.16
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 16/82 (19%)
Query: 134 HRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVS 193
+R K E+ +MV+G +GKS+LINSL L + PG + + +QV
Sbjct: 41 YRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPE------YPGPSHRIKKTVQVE 94
Query: 194 E----------RPLMFLLDTPG 205
+ + L+ ++DTPG
Sbjct: 95 QSKVLIKEGGVQLLLTIVDTPG 116
>gi|148352329 cell division cycle 10 isoform 2 [Homo sapiens]
Length = 436
Score = 34.3 bits (77), Expect = 0.16
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 16/82 (19%)
Query: 134 HRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVS 193
+R K E+ +MV+G +GKS+LINSL L + PG + + +QV
Sbjct: 40 YRKSVKRGFEFTLMVVGESGLGKSTLINSLFLTDLYSPE------YPGPSHRIKKTVQVE 93
Query: 194 E----------RPLMFLLDTPG 205
+ + L+ ++DTPG
Sbjct: 94 QSKVLIKEGGVQLLLTIVDTPG 115
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 33.5 bits (75), Expect = 0.27
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 12/72 (16%)
Query: 146 IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSER---------- 195
I V+G + GK+ +++ LR H++ G+A + + G T + I +
Sbjct: 634 ICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENV 693
Query: 196 --PLMFLLDTPG 205
P M ++DTPG
Sbjct: 694 RIPGMLIIDTPG 705
>gi|9945439 septin 5 [Homo sapiens]
Length = 369
Score = 33.5 bits (75), Expect = 0.27
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 115 KDENVKQIIPMVTELIGRSHRYHRKENLEYCIMVIGVPNVGKSSLINSLRRQHLRKGKAT 174
K + KQ + T L + HR K+ ++ +MV G +GKS+L++SL L K +
Sbjct: 17 KQDIDKQYVGFAT-LPNQVHRKSVKKGFDFTLMVAGESGLGKSTLVHSLFLTDLYKDRKL 75
Query: 175 RVGGEPGITRAV---MSKIQVSERPL---MFLLDTPG 205
+ E I++ V + + E+ + + ++DTPG
Sbjct: 76 -LSAEERISQTVEILKHTVDIEEKGVKLKLTIVDTPG 111
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,532,900
Number of Sequences: 37866
Number of extensions: 521786
Number of successful extensions: 1254
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1202
Number of HSP's gapped (non-prelim): 62
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.