Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: SEPT2 Sequence: fasta or formatted (361aa) NCBI GI: 56549636
Description:

septin 2

Referenced in:

Additional Cell Cycle Functions

Other entries for this name:
alt mRNA [361aa] septin 2
alt mRNA [361aa] septin 2
alt mRNA [361aa] septin 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         16           2
 C cysteine            1.1          4           2
 D aspartate           5.8         21           1
 E glutamate           9.7         35           2
 F phenylalanine       4.2         15           1
 G glycine             6.9         25           2
 H histidine           3.6         13           2
 I isoleucine          6.9         25           2
 K lysine              7.2         26           2
 L leucine             8.9         32           2
 M methionine          3.3         12           1
 N asparagine          4.4         16           1
 P proline             3.9         14           1
 Q glutamine           5.0         18           2
 R arginine            6.6         24           2
 S serine              3.9         14           1
 T threonine           4.4         16           1
 V valine              6.9         25           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.5          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   septin 2 
SEPT2                 1.000   septin 2 
SEPT2                 1.000   septin 2 
SEPT2                 1.000   septin 2 
SEPT4                 0.585   septin 4 isoform 1 
SEPT4                 0.585   septin 4 isoform 3 
SEPT5                 0.574   septin 5 
SEPT1                 0.534   septin 1 
SEPT7                 0.501   cell division cycle 10 isoform 1 
SEPT7                 0.501   cell division cycle 10 isoform 2 
SEPT3                 0.380   septin 3 isoform A 
SEPT3                 0.380   septin 3 isoform B 
SEPT9                 0.377   septin 9 isoform f 
SEPT9                 0.377   septin 9 isoform d 
SEPT9                 0.377   septin 9 isoform e 
SEPT9                 0.377   septin 9 isoform b 
SEPT9                 0.377   septin 9 isoform e 
SEPT9                 0.377   septin 9 isoform a 
SEPT9                 0.377   septin 9 isoform c 
SEPT12                0.340   septin 12 isoform 2 
SEPT8                 0.326   septin 8 isoform c 
SEPT8                 0.326   septin 8 isoform a 
SEPT8                 0.326   septin 8 isoform b 
SEPT11                0.319   septin 11 
SEPT6                 0.316   septin 6 isoform B 
SEPT6                 0.316   septin 6 isoform D 
SEPT6                 0.316   septin 6 isoform A 
SEPT6                 0.316   septin 6 isoform A 
SEPT10                0.313   septin 10 isoform 2 
SEPT10                0.313   septin 10 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press