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Search of human proteins with 9256608
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
(798 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9256608 protocadherin beta 14 precursor [Homo sapiens] 1571 0.0
gi|9256612 protocadherin beta 2 precursor [Homo sapiens] 1227 0.0
gi|9256604 protocadherin beta 11 precursor [Homo sapiens] 1213 0.0
gi|9256614 protocadherin beta 3 precursor [Homo sapiens] 1204 0.0
gi|14195605 protocadherin beta 16 precursor [Homo sapiens] 1203 0.0
gi|9256606 protocadherin beta 12 precursor [Homo sapiens] 1201 0.0
gi|9256616 protocadherin beta 4 precursor [Homo sapiens] 1189 0.0
gi|7661662 protocadherin beta 5 precursor [Homo sapiens] 1181 0.0
gi|9256610 protocadherin beta 15 precursor [Homo sapiens] 1179 0.0
gi|14195616 protocadherin beta 9 precursor [Homo sapiens] 1177 0.0
gi|11036656 protocadherin beta 7 precursor [Homo sapiens] 1175 0.0
gi|9256602 protocadherin beta 10 precursor [Homo sapiens] 1173 0.0
gi|9256618 protocadherin beta 6 precursor [Homo sapiens] 1166 0.0
gi|11276081 protocadherin beta 8 precursor [Homo sapiens] 1165 0.0
gi|11036654 protocadherin beta 13 precursor [Homo sapiens] 1159 0.0
gi|14195607 protocadherin beta 1 precursor [Homo sapiens] 778 0.0
gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precurs... 645 0.0
gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precurs... 645 0.0
gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precurs... 624 e-178
gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precurs... 624 e-178
gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precurs... 621 e-178
gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precurs... 621 e-178
gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precurs... 620 e-177
gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precurs... 620 e-177
gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precurs... 619 e-177
gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precurs... 619 e-177
gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precurs... 617 e-176
gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precurs... 617 e-176
gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precurs... 617 e-176
gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precurs... 617 e-176
>gi|9256608 protocadherin beta 14 precursor [Homo sapiens]
Length = 798
Score = 1571 bits (4069), Expect = 0.0
Identities = 798/798 (100%), Positives = 798/798 (100%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS
Sbjct: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE
Sbjct: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI
Sbjct: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP
Sbjct: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE
Sbjct: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA
Sbjct: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
Query: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT
Sbjct: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
Query: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
Query: 781 RNMGEIENFRNSFGLNIQ 798
RNMGEIENFRNSFGLNIQ
Sbjct: 781 RNMGEIENFRNSFGLNIQ 798
>gi|9256612 protocadherin beta 2 precursor [Homo sapiens]
Length = 798
Score = 1227 bits (3174), Expect = 0.0
Identities = 618/784 (78%), Positives = 687/784 (87%)
Query: 10 RKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVSD 69
++RQVLIF VLLG+++A + HYSVAEETE GSFVANL +DLGL + EL+ R ARVVS
Sbjct: 12 KQRQVLIFFVLLGIAQASCQPRHYSVAEETESGSFVANLLKDLGLEIGELAVRGARVVSK 71
Query: 70 DNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDINDH 129
K +L D TG+LLLNEKLDR+ELCG TEPCVL FQV+LENPLQFF+ EL ++D+NDH
Sbjct: 72 GKKMHLQFDRQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQFFQAELRIRDVNDH 131
Query: 130 SPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDRK 189
SP FLDKEIL+KI E T G TFL+E AQDLDVG+NSLQNYTISPN HF++ + DS D
Sbjct: 132 SPVFLDKEILLKIPESITPGTTFLIERAQDLDVGTNSLQNYTISPNFHFHLNLQDSLDGI 191
Query: 190 IYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEV 249
I P+LVL+RALD E++ E+RLTLTA+DGGSPP+SGT LV I+V+DINDN PEF + LYEV
Sbjct: 192 ILPQLVLNRALDREEQPEIRLTLTALDGGSPPRSGTALVRIEVVDINDNVPEFAKLLYEV 251
Query: 250 QVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDF 309
Q+PED P+GS +A +SA+DLD G G+ISY F ASEDIRKTF ++ SGE+ LR LDF
Sbjct: 252 QIPEDSPVGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLSAKSGELLLRQKLDF 311
Query: 310 EVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASETLVALFS 369
E IQ+YT+NIQATDGGGLSG C + V+VMD+NDNPPE+T+S++ +IPEN +TL+A+FS
Sbjct: 312 ESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQIPENLQDTLIAVFS 371
Query: 370 ILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGTP 429
+ D DSGDNGRM+CSIQD+LPFFLKP+ +NF+TLV ALDRE+++EYNITITVTD GTP
Sbjct: 372 VSDPDSGDNGRMVCSIQDDLPFFLKPSVENFYTLVISTALDRETRSEYNITITVTDFGTP 431
Query: 430 RLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYS 489
RLKTE+NITVL+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV YS
Sbjct: 432 RLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYS 491
Query: 490 LLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVRV 549
LLPPQD HLPLASLVSINADNGHLFAL+SLDYEALQ FEFRVGA DRGSPALSSEALVRV
Sbjct: 492 LLPPQDPHLPLASLVSINADNGHLFALQSLDYEALQAFEFRVGAADRGSPALSSEALVRV 551
Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 552 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 611
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
TEPGLFGVWAHNGEVRTARLL ERDAAK RLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 612 TEPGLFGVWAHNGEVRTARLLRERDAAKQRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 671
Query: 670 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPE 729
YL LPEAAPAQAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPE
Sbjct: 672 YLLLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPE 731
Query: 730 GPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTGRNMGEIENF 789
GPFPG +VDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNF R +F
Sbjct: 732 GPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAERVSEANPSF 791
Query: 790 RNSF 793
R SF
Sbjct: 792 RKSF 795
>gi|9256604 protocadherin beta 11 precursor [Homo sapiens]
Length = 797
Score = 1213 bits (3138), Expect = 0.0
Identities = 613/796 (77%), Positives = 693/796 (87%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
ME +G + RQVL+ VLLG+S+AG+E+ +SVAEE + GSFV NLA+DLGL V ELS
Sbjct: 1 MENQGTRTQQIRQVLLLFVLLGMSQAGSETWSFSVAEEMQSGSFVGNLAKDLGLKVRELS 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
SR ARVVS+D K+ L LD+ TG+LLL+E LDR+ELCGS EPCVLH QV+++NP QF + E
Sbjct: 61 SRGARVVSNDKKQRLQLDINTGDLLLSETLDREELCGSIEPCVLHLQVLMQNPTQFLQIE 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
L V+DINDHSP F +K++L++I E + VGA FL+ESA+DLDVG N++++YTISPNSHF+I
Sbjct: 121 LQVRDINDHSPIFSEKQMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTISPNSHFHI 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
K+ D + YPELVLD+ALDYE+ EL L+A+DGGSPP+SGT LV + V+DINDN+P
Sbjct: 181 KMRVIPDNRKYPELVLDKALDYEELPELSFILSALDGGSPPRSGTALVRVVVVDINDNSP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
EF Q+ YEV++ E+ LGS I +SA DLD+G G+I YTF HASEDIRKTFEIN SGE
Sbjct: 241 EFEQAFYEVKIRENSILGSLILIVSAWDLDSGTNGEICYTFSHASEDIRKTFEINQKSGE 300
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
+ LR+PLDFE I+SY+I IQATDGGGL GK T+++ V+D+NDN PE+T+SSIT IPEN
Sbjct: 301 ITLRAPLDFETIESYSIIIQATDGGGLFGKSTVIIHVIDVNDNAPEITVSSITSPIPENT 360
Query: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
ET+V +FSI D DSGDNGR++CSI ++LPF LK + +N++TL +E+ LDRES AEYNIT
Sbjct: 361 PETVVMVFSIQDIDSGDNGRIVCSIPEDLPFVLKSSVENYYTLETERPLDRESTAEYNIT 420
Query: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTDLG PRLKTE+N TVL+SDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
GTNAQVNYSLLPPQD HLPLASLVSIN DNGHLFALRSLDYEALQ F+FRVGATDRGSPA
Sbjct: 481 GTNAQVNYSLLPPQDLHLPLASLVSINTDNGHLFALRSLDYEALQAFDFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLQV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
SVG CSVP+GPFPGHLVDVSGTGTLSQSYQYEVCLTGGS TNEFKFLKP+IPN Q G
Sbjct: 721 SVGSCSVPKGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSETNEFKFLKPVIPNIQAKGLG 780
Query: 781 RNMGEIENFRNSFGLN 796
+N E FRNSFG N
Sbjct: 781 KNSEENSTFRNSFGFN 796
>gi|9256614 protocadherin beta 3 precursor [Homo sapiens]
Length = 796
Score = 1204 bits (3114), Expect = 0.0
Identities = 606/793 (76%), Positives = 685/793 (86%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
ME G LR+RQVL+ V LG S AG+ES YSVAEE E G +ANLA+DLGL VEEL+
Sbjct: 1 MEAGGERFLRQRQVLLLFVFLGGSLAGSESRRYSVAEEKEKGFLIANLAKDLGLRVEELA 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
+R A+VVS NK++ L TG+LLLNEKLDR+ELCG TEPC+LHFQ++L+NPLQF E
Sbjct: 61 ARGAQVVSKGNKQHFQLSHQTGDLLLNEKLDREELCGPTEPCILHFQILLQNPLQFVTNE 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
L + D+NDHSP F + E+ +KI E T G + +A+DLDVG NSLQNYTI+PNSHF++
Sbjct: 121 LRIIDVNDHSPVFFENEMHLKILESTLPGTVIPLGNAEDLDVGRNSLQNYTITPNSHFHV 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
D + YPELVLD+ALD E++ EL LTLTA+DGGSPP+SGT + I+VLDINDNAP
Sbjct: 181 LTRSRRDGRKYPELVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
EF Q LYEV V E+ P+ S I T+SA DLD G++G ISY FFHASE+IRKTF++NPI+G+
Sbjct: 241 EFAQPLYEVAVLENTPVNSVIVTVSASDLDTGSFGTISYAFFHASEEIRKTFQLNPITGD 300
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
+ L L+FE I SY ++I+A DGGGLSGK T++V+V+D+NDNPPE+T+SS+ IPEN+
Sbjct: 301 MQLVKYLNFEAINSYEVDIEAKDGGGLSGKSTVIVQVVDVNDNPPELTLSSVNSPIPENS 360
Query: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
ET++A+FS+ D DSGDNGR++CSI++NLPFFLKP+ +NF+TLVSE ALDRE+++EYNIT
Sbjct: 361 GETVLAVFSVSDLDSGDNGRVMCSIENNLPFFLKPSVENFYTLVSEGALDRETRSEYNIT 420
Query: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
IT+TDLGTPRLKT+YNITVL+SDVNDNAP FTQ SYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
GTNAQV YSLLPPQD HLPL+SLVSINADNGHLFALRSLDYEALQ FEFRVGATDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
SVGRCSVPEGPFPG +VDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNF
Sbjct: 721 SVGRCSVPEGPFPGQMVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFVAQGAE 780
Query: 781 RNMGEIENFRNSF 793
R +FR SF
Sbjct: 781 RVSEANPSFRKSF 793
>gi|14195605 protocadherin beta 16 precursor [Homo sapiens]
Length = 776
Score = 1203 bits (3113), Expect = 0.0
Identities = 599/774 (77%), Positives = 685/774 (88%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
MEI + R+RQVL+F VLL LS AG E YSV EETE GSFVANL +DLGLG+ E+S
Sbjct: 1 MEIGWMHNRRQRQVLVFFVLLSLSGAGAELGSYSVVEETERGSFVANLGKDLGLGLTEMS 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
+R+AR++S NK++L L TG+LL+NEKLDR+ELCG TEPC+LHFQV++ENPL+ F+ E
Sbjct: 61 TRKARIISQGNKQHLQLKAQTGDLLINEKLDREELCGPTEPCILHFQVLMENPLEIFQAE 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
L V DINDHSP F +KE+++KI E + +G F + A DLDVGSN++QNY ISP+SHF +
Sbjct: 121 LRVIDINDHSPMFTEKEMILKIPENSPLGTEFPLNHALDLDVGSNNVQNYKISPSSHFRV 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
I + D + YPELVLD+ LD E+E +LRLTLTA+DGGSPP+SGT V I+V+DINDNAP
Sbjct: 181 LIHEFRDGRKYPELVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
EF Q +Y+VQ+PE+ PLGS +AT+SA+DLD G GKISYT F SEDI KT E+NP++GE
Sbjct: 241 EFEQPIYKVQIPENSPLGSLVATVSARDLDGGANGKISYTLFQPSEDISKTLEVNPMTGE 300
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
V LR +DFE++ SY + I+ATDGGGLSGKCTLL++V+D+NDNPP+VT+S++T IPEN+
Sbjct: 301 VRLRKQVDFEMVTSYEVRIKATDGGGLSGKCTLLLQVVDVNDNPPQVTMSALTSPIPENS 360
Query: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
E +VA+FS+ D DSG+NG+ I SIQ++LPF LKP+ KNF+TLV+E+ALDRE++AEYNIT
Sbjct: 361 PEIVVAVFSVSDPDSGNNGKTISSIQEDLPFLLKPSVKNFYTLVTERALDREARAEYNIT 420
Query: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
+TVTD+GTPRLKTE+NITV +SDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 LTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
GTNAQV YSLLPPQD HLPLASLVSINADNGHLFALRSLDYEAL+EFEFRV ATDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALREFEFRVSATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQP+LPLPEAAP Q QA+SLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPFLPLPEAAPGQTQANSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNF 774
SVGRCS+PEGPFPG LVDVSGTGTLSQSYQYEVCLTGGS T+EFKFLKPIIPNF
Sbjct: 721 SVGRCSMPEGPFPGRLVDVSGTGTLSQSYQYEVCLTGGSETSEFKFLKPIIPNF 774
>gi|9256606 protocadherin beta 12 precursor [Homo sapiens]
Length = 795
Score = 1201 bits (3107), Expect = 0.0
Identities = 604/794 (76%), Positives = 691/794 (87%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
ME GA L+ RQVL+F VLLG+S+AG+E+ ++ V EE + GSFV NLA+ LGL V ELS
Sbjct: 1 MENGGAGTLQIRQVLLFFVLLGMSQAGSETGNFLVMEELQSGSFVGNLAKTLGLEVSELS 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
SR ARVVS+DNK+ L LD TG+LLL E LDR+ELCGS EPCVL+FQV+++NP QF + E
Sbjct: 61 SRGARVVSNDNKECLQLDTNTGDLLLREMLDREELCGSNEPCVLYFQVLMKNPTQFLQIE 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
L V+DINDHSP FL+KE+L++I E + VGA FL+ESA+DLDVG N++++YTI+PNSHF++
Sbjct: 121 LQVRDINDHSPVFLEKEMLLEIPENSPVGAVFLLESAKDLDVGINAVKSYTINPNSHFHV 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
KI + D + YPELVLD+ALDYE+ EL LTA+DGGSPP+SGT LV + V+DINDN+P
Sbjct: 181 KIRVNPDNRKYPELVLDKALDYEERPELSFILTALDGGSPPRSGTALVRVVVVDINDNSP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
EF Q+ YEV++ E+ LGS + T+SA DLD+G ++SYTF HASEDIRKTFEIN SG+
Sbjct: 241 EFEQAFYEVKILENSILGSLVVTVSAWDLDSGTNSELSYTFSHASEDIRKTFEINQKSGD 300
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
+ L +PLDFE I+SY+I IQATDGGGL GK T+ ++VMD+NDN PE+T+SSIT IPEN
Sbjct: 301 ITLTAPLDFEAIESYSIIIQATDGGGLFGKSTVRIQVMDVNDNAPEITVSSITSPIPENT 360
Query: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
ET+V +F I D+DSGDNG+M+CSI +++PF LK + N++TL +E+ LDRES+AEYNIT
Sbjct: 361 PETVVMVFRIRDRDSGDNGKMVCSIPEDIPFVLKSSVNNYYTLETERPLDRESRAEYNIT 420
Query: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTDLGTPRLKTE+NITVL+SDVNDNAP FTQTSY LFVRENNSPALHIGS+SATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYALFVRENNSPALHIGSISATDRDS 480
Query: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
GTNAQVNYSLLP QD HLPLASLVSINADNGHLFALRSLDYEALQ F+FRVGATD GSPA
Sbjct: 481 GTNAQVNYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQGFQFRVGATDHGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVP AAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPWAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
VGRCSVPEGPFPGHLVDVSGTGTLSQSY YEVC+TGGS +N+FKFLKPIIPNF TG
Sbjct: 721 PVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCVTGGSRSNKFKFLKPIIPNFLPQSTG 780
Query: 781 RNMGEIENFRNSFG 794
+ E F+N+ G
Sbjct: 781 SEVEENPPFQNNLG 794
>gi|9256616 protocadherin beta 4 precursor [Homo sapiens]
Length = 795
Score = 1189 bits (3075), Expect = 0.0
Identities = 598/781 (76%), Positives = 675/781 (86%)
Query: 12 RQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVSDDN 71
RQVL F++++ LS+ E YSV EETE GSFVA+LA+DLGLG+ EL+SR ARV+SDD+
Sbjct: 11 RQVLAFILMVFLSQVRLEPIRYSVLEETESGSFVAHLAKDLGLGIGELASRSARVLSDDD 70
Query: 72 KKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDINDHSP 131
K+ L LD TG+LLL EKLDR+ELCG EPCVLHFQV LE P+QFF+ EL ++DINDHSP
Sbjct: 71 KQRLQLDRQTGDLLLREKLDREELCGPIEPCVLHFQVFLEMPVQFFQGELLIQDINDHSP 130
Query: 132 TFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDRKIY 191
F ++E+L+KI E + G F + A+DLDVGSN LQ YTISPNSHF+I + S+ K Y
Sbjct: 131 IFPEREVLLKILENSQPGTLFPLLIAEDLDVGSNGLQKYTISPNSHFHILTRNHSEGKKY 190
Query: 192 PELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEVQV 251
P+LV D+ LD E++ E LTL A+DGGSPP+SGT +V I ++DINDNAPEF + Y VQV
Sbjct: 191 PDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQV 250
Query: 252 PEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEV 311
E+ PL S I + A+D+DAGN+G +SY F AS++I++TF IN ++GE+ L+ LDFE
Sbjct: 251 LENSPLDSPIVRVLARDIDAGNFGSVSYGLFQASDEIKQTFSINEVTGEILLKKKLDFEK 310
Query: 312 IQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASETLVALFSIL 371
I+SY + I+ATDGGGLSGK T++++V+D+NDNPPE+ ISS+T IPENA ET+V++F I
Sbjct: 311 IKSYHVEIEATDGGGLSGKGTVVIEVVDVNDNPPELIISSLTSSIPENAPETVVSIFRIR 370
Query: 372 DQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGTPRL 431
D+DSG+NG+MICSI DNLPF LKPT KNF+TLV+E+ LDRE+ AEYNITI VTDLGTPRL
Sbjct: 371 DRDSGENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVTDLGTPRL 430
Query: 432 KTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLL 491
KT+ NITV +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQV YSLL
Sbjct: 431 KTQQNITVQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLL 490
Query: 492 PPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVRVLV 551
PPQD HLPLASLVSINADNGHLFALRSLDYEALQ FEFRVGA+DRGSPALSSEALVRVLV
Sbjct: 491 PPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLV 550
Query: 552 LDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
LD NDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE
Sbjct: 551 LDTNDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 610
Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 671
PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL
Sbjct: 611 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 670
Query: 672 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEGP 731
PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEGP
Sbjct: 671 PLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPEGP 730
Query: 732 FPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTGRNMGEIENFRN 791
FPGHLVDVSGTGTLSQSYQYEVCLTG SGT EFKFLKPI PN V DTGR + E FRN
Sbjct: 731 FPGHLVDVSGTGTLSQSYQYEVCLTGDSGTGEFKFLKPIFPNLLVQDTGREVKENPKFRN 790
Query: 792 S 792
S
Sbjct: 791 S 791
>gi|7661662 protocadherin beta 5 precursor [Homo sapiens]
Length = 795
Score = 1181 bits (3055), Expect = 0.0
Identities = 595/796 (74%), Positives = 675/796 (84%), Gaps = 1/796 (0%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
ME A +KRQV+ +LL L AG+E+ YS+ EETE G VANLA+DLGLGV EL+
Sbjct: 1 METALAKTPQKRQVMFLAILLLLWEAGSEAVRYSIPEETESGYSVANLAKDLGLGVGELA 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
+R AR+ NK+ L LD+ TGNLLL EKLDR+ +CG+TEPC+LHFQ++LENP+QFF+ +
Sbjct: 61 TRGARMHYKGNKELLQLDIKTGNLLLYEKLDREVMCGATEPCILHFQLLLENPVQFFQTD 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
L + DINDH+P F +KE+L+KI E T G F ++ AQD D+GSN++QNYTISPNSHF++
Sbjct: 121 LQLTDINDHAPEFPEKEMLLKIPESTQPGTVFPLKIAQDFDIGSNTVQNYTISPNSHFHV 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
+ D + YPELVLD+ALD E+ EL LTLTA+DGG+PP+SGTT + I VLD NDNAP
Sbjct: 181 ATHNRGDGRKYPELVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
EF QS YEVQVPE+ PL S + +SA+DLDAG YG ++Y F E + + F I+ + E
Sbjct: 241 EFLQSFYEVQVPENSPLNSLVVVVSARDLDAGAYGSVAYALFQGDE-VTQPFVIDEKTAE 299
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
+ L+ LDFE Y + I ATDGGGLSGKCT+ ++V+D+NDN PE+T+S+++ PENA
Sbjct: 300 IRLKRALDFEATPYYNVEIVATDGGGLSGKCTVAIEVVDVNDNAPELTMSTLSSPTPENA 359
Query: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
ET+VA+FS+ D DSGDNGRMICSIQ++LPF LKPT KNF+TLV+++ LDRESQAEYNIT
Sbjct: 360 PETVVAVFSVSDPDSGDNGRMICSIQNDLPFLLKPTLKNFYTLVTQRTLDRESQAEYNIT 419
Query: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTD+GTPRLKTE+NITVL+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 420 ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 479
Query: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
GTNAQV YSLLPPQ+ HL LASLVSINADNGHLFALRSLDYEALQ FEFRVGATDRGSPA
Sbjct: 480 GTNAQVTYSLLPPQNPHLRLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 540 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 599
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLF +WAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 600 WLSYQLLKATEPGLFSMWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 659
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA
Sbjct: 660 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 719
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
SVGRCSVPEGPFPGHLVDVSGTGTLSQSY YEVCLTG SG EFKFLKPIIPN G
Sbjct: 720 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYHYEVCLTGDSGAGEFKFLKPIIPNLLPQGAG 779
Query: 781 RNMGEIENFRNSFGLN 796
+G+ FRNSFGLN
Sbjct: 780 EEIGKTAAFRNSFGLN 795
>gi|9256610 protocadherin beta 15 precursor [Homo sapiens]
Length = 787
Score = 1179 bits (3049), Expect = 0.0
Identities = 594/787 (75%), Positives = 679/787 (86%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
ME G +RQVLI L+LL ++ AG E YSV EETE GSFVANLA DLGLGV EL+
Sbjct: 1 MEPAGERFPEQRQVLILLLLLEVTLAGWEPRRYSVMEETERGSFVANLANDLGLGVGELA 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
R ARVVS+DN++ L LDL TG L+LNEKLDR++LCG TEPC++HFQV+L+ PL+ FR E
Sbjct: 61 ERGARVVSEDNEQGLQLDLQTGQLILNEKLDREKLCGPTEPCIMHFQVLLKKPLEVFRAE 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
L V DINDHSP F ++E+ +KI E +++G F ++ A+DLDVGSN++QNY ISPNSHF++
Sbjct: 121 LLVTDINDHSPEFPEREMTLKIPETSSLGTVFPLKKARDLDVGSNNVQNYNISPNSHFHV 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
D + YPELVLD LD E++AELRLTLTAVDGGSPP+SGT +LI VLD NDNAP
Sbjct: 181 STRTRGDGRKYPELVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
EF Q+LYEVQVPE+ P+GS + +SA+DLD G G+ISY+ +++S++I K FE++ +SGE
Sbjct: 241 EFVQALYEVQVPENSPVGSLVVKVSARDLDTGTNGEISYSLYYSSQEIDKPFELSSLSGE 300
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
+ L LDFE + SY ++I+A+DGGGLSGKC++ VKV+D+NDN PE++ISS+T IPEN+
Sbjct: 301 IRLIKKLDFETMSSYDLDIEASDGGGLSGKCSVSVKVLDVNDNFPELSISSLTSPIPENS 360
Query: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
ET VALF I D+DSG+NG+MICSIQD++PF LKP+ +NF+ LV+E ALDRE++AEYNIT
Sbjct: 361 PETEVALFRIRDRDSGENGKMICSIQDDVPFKLKPSVENFYRLVTEGALDRETRAEYNIT 420
Query: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
IT+TDLGTPRLKTE +ITVL+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
GTNAQV YSLLPP+D HLPL SLVSIN DNGHLFAL+SLDYEALQ FEFRVGATDRG PA
Sbjct: 481 GTNAQVTYSLLPPRDPHLPLTSLVSINTDNGHLFALQSLDYEALQAFEFRVGATDRGFPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERD AKHRLVVLVKDNGEPPRSATATL V
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDVAKHRLVVLVKDNGEPPRSATATLQV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSV LFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGS +N+FKFLKPI PN D+
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSESNDFKFLKPIFPNIVSQDSR 780
Query: 781 RNMGEIE 787
R +E
Sbjct: 781 RKSEFLE 787
>gi|14195616 protocadherin beta 9 precursor [Homo sapiens]
Length = 797
Score = 1177 bits (3044), Expect = 0.0
Identities = 594/796 (74%), Positives = 673/796 (84%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
M+ RG R+RQVL + G+S AG+ YSV EETE GSFV NLA+DLGL EL+
Sbjct: 1 MKTRGFSFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
+R RVVSDDNK+YL LD TGNLL NEKLDR++LCG EPC+L+FQ+++++P Q +R E
Sbjct: 61 ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
L V+DINDHSP F KE+++KISE T G F +E AQD D G NS+QNYTIS NS F+I
Sbjct: 121 LRVRDINDHSPVFRHKEMVLKISENTAEGTAFRLERAQDPDEGHNSIQNYTISSNSFFHI 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
KI S + IYPELVLD+ALD E++ EL LTLTA+DGGSP +SGT+ + I VLD+NDNAP
Sbjct: 181 KISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
+F Q+LYE Q PE+ P+GS I +SA D D+G ++SY+FF ASEDI TF+INP SGE
Sbjct: 241 QFAQALYETQAPENSPVGSLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGE 300
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
+ LR LD+E++ SY INIQA DGGGLS +CT+L+KV+D NDNPPE+ ISS++ + EN+
Sbjct: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCTVLIKVLDSNDNPPELIISSLSNSVAENS 360
Query: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
++A+F I D+DSG+NG+ IC +QDNLPFFLKP+ NF+ L++E ALDRES+AEYNIT
Sbjct: 361 PGIVLAVFKIKDRDSGENGKTICYVQDNLPFFLKPSVDNFYILMTEGALDRESKAEYNIT 420
Query: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTDLGTPRLKTE++IT+ +SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
GTNAQV YSLLPPQD HLPLASLVSINADNGHLFALRSLDYEALQ F+FRVGA+DRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYLPLPEAAPAQAQAD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 720
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
SVGRCSVPEGPFPGHLVDVSGTGTL QSYQYEVCLTGGS T EFKFLKPI P+ H G
Sbjct: 721 SVGRCSVPEGPFPGHLVDVSGTGTLFQSYQYEVCLTGGSETGEFKFLKPITPHLPPHRGG 780
Query: 781 RNMGEIENFRNSFGLN 796
+ + E NSFG N
Sbjct: 781 KEIEENSTLPNSFGFN 796
>gi|11036656 protocadherin beta 7 precursor [Homo sapiens]
Length = 793
Score = 1175 bits (3040), Expect = 0.0
Identities = 599/794 (75%), Positives = 677/794 (85%), Gaps = 2/794 (0%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
ME R ++KRQVL V LG+S AG E Y VAEETE G+F+ NLA+DLGLGV EL
Sbjct: 1 MEARVERAVQKRQVLFLCVFLGMSWAGAEPLRYFVAEETERGTFLTNLAKDLGLGVGELR 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
+R R+VSD N + L L LTG+LLLNEKLDR+ELCG EPCVL FQ++LE P Q FR E
Sbjct: 61 ARGTRIVSDQNMQILLLSSLTGDLLLNEKLDREELCGPREPCVLPFQLLLEKPFQIFRAE 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
L V+DINDH+P FLD+EI +KI E TT GA FL+ESAQD DVG+NSL NYTISPN++F+I
Sbjct: 121 LWVRDINDHAPVFLDREISLKILESTTPGAAFLLESAQDSDVGTNSLSNYTISPNAYFHI 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
+ DS + IYPELVL++ LD E+ E LTLTA+DGGSPP+SGT LV I VLD+NDNAP
Sbjct: 181 NVHDSGEGNIYPELVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDVNDNAP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
+F +SLY+VQVPE+ P+GS + ++SA+DLD G+ G+I+Y F +A+E I KTF+INP SG
Sbjct: 241 DFVRSLYKVQVPENSPVGSMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGS 300
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
++L++ LD+E IQ+YT+ IQA DGGGLSGKCT++V V DINDN PE+ +SS+T I EN+
Sbjct: 301 LHLKAQLDYEAIQTYTLTIQAKDGGGLSGKCTVVVDVTDINDNRPELLLSSLTSPIAENS 360
Query: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
ET+VA+F I D+DSG+NG+ +CSIQD++PF LKP+ +NF+TLV+EK LDRE EYNIT
Sbjct: 361 PETVVAVFRIRDRDSGNNGKTVCSIQDDVPFILKPSVENFYTLVTEKPLDRERNTEYNIT 420
Query: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTDLGTPRLKTE+NITVL+SDVNDNAP FTQTSYTLFVRENNSPAL IGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALPIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
GTNAQV YSLLP QD HLPLASLVSINADNGHLFALRSLDYEALQ FEFRVGATDRGSPA
Sbjct: 481 GTNAQVIYSLLPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LSSEALVRVLVLDANDNSPFVLYPLQN SAPCTE +PRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSSEALVRVLVLDANDNSPFVLYPLQNSSAPCTEPLPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPPRSATATLHV
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPRSATATLHV 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAA 720
LLVDGFSQPYL LPEAAP QA+SLTVYLVVALASVSSLFL SVLLFVAVRLCRRSRAA
Sbjct: 661 LLVDGFSQPYLRLPEAAP--DQANSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAA 718
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTG 780
VGRCSVPEGPFP HLVD+SGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPN TG
Sbjct: 719 PVGRCSVPEGPFPRHLVDLSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNLLPQSTG 778
Query: 781 RNMGEIENFRNSFG 794
R + E F+N+ G
Sbjct: 779 REVEENRPFQNNLG 792
>gi|9256602 protocadherin beta 10 precursor [Homo sapiens]
Length = 800
Score = 1173 bits (3034), Expect = 0.0
Identities = 593/800 (74%), Positives = 672/800 (84%), Gaps = 2/800 (0%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
M +R R+RQVL + G+S AG+ YSV EETE GSFV NLA+DLGL EL+
Sbjct: 1 MAVRELCFPRQRQVLFLFLFWGVSLAGSGFGRYSVTEETEKGSFVVNLAKDLGLAEGELA 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
+R RVVSDDNK+YL LD TGNLL NEKLDR++LCG EPC+L+FQ+++++P Q +R E
Sbjct: 61 ARGTRVVSDDNKQYLLLDSHTGNLLTNEKLDREKLCGPKEPCMLYFQILMDDPFQIYRAE 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
L V+DINDH+P F DKE ++KISE T G F +E AQD D G N +QNYTISPNS F+I
Sbjct: 121 LRVRDINDHAPVFQDKETVLKISENTAEGTAFRLERAQDPDGGLNGIQNYTISPNSFFHI 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
I + IYPELVLD+ALD E++ EL LTLTA+DGGSP +SGT+ V I VLD+NDNAP
Sbjct: 181 NISGGDEGMIYPELVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
+F Q+LYE Q PE+ P+G I + A+D+D+G ++SY+FF ASE+IR TF+INP SGE
Sbjct: 241 QFAQALYETQAPENSPIGFLIVKVWAEDVDSGVNAEVSYSFFDASENIRTTFQINPFSGE 300
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA 360
+ LR LD+E++ SY INIQA DGGGLS +C +LV+V+D NDNPPE+ +SS + + EN+
Sbjct: 301 IFLRELLDYELVNSYKINIQAMDGGGLSARCRVLVEVLDTNDNPPELIVSSFSNSVAENS 360
Query: 361 SETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNIT 420
ET +A+F I D+DSG+NG+M+C IQ+NLPF LKP+ +NF+ L++E ALDRE +AEYNIT
Sbjct: 361 PETPLAVFKINDRDSGENGKMVCYIQENLPFLLKPSVENFYILITEGALDREIRAEYNIT 420
Query: 421 ITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
ITVTDLGTPRLKTE+NITVL+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRDS
Sbjct: 421 ITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDS 480
Query: 481 GTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
GTNAQV YSLLPPQD HLPLASLVSINADNGHLFALRSLDYEALQ FEFRVGATDRGSPA
Sbjct: 481 GTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
Query: 541 LSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
LS EALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA
Sbjct: 541 LSREALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH+
Sbjct: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHL 660
Query: 661 LLVDGFSQPYLPLPEAAPAQAQ--ADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR 718
LLVDGFSQPYLPLPEAAPAQAQ AD LTVYLVVALASVSSLFL SVLLFVAVRLCRRSR
Sbjct: 661 LLVDGFSQPYLPLPEAAPAQAQAEADLLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSR 720
Query: 719 AASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHD 778
AASVGRCSVPEGPFPGHLVDV G TLSQSYQYEVCLTGG GT+EFKFLKP+I + Q
Sbjct: 721 AASVGRCSVPEGPFPGHLVDVRGAETLSQSYQYEVCLTGGPGTSEFKFLKPVISDIQAQG 780
Query: 779 TGRNMGEIENFRNSFGLNIQ 798
GR E FRNSFG NIQ
Sbjct: 781 PGRKGEENSTFRNSFGFNIQ 800
>gi|9256618 protocadherin beta 6 precursor [Homo sapiens]
Length = 794
Score = 1166 bits (3016), Expect = 0.0
Identities = 591/784 (75%), Positives = 670/784 (85%), Gaps = 1/784 (0%)
Query: 10 RKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVSD 69
+KRQV F++L+ G+ES YSV EETE G+FVANL +DLGL V EL+SR ARVV
Sbjct: 9 KKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELASRGARVVFK 68
Query: 70 DNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDINDH 129
N+++L D T +LLLNEKLDR+ELCGSTEPCVL FQV+LENPLQFF+ L V+DINDH
Sbjct: 69 GNRQHLQFDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLRVRDINDH 128
Query: 130 SPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDRK 189
+P F +E+L+KISE T G F ++ A DLD GSN LQ YTIS N HF++ + S+ +
Sbjct: 129 APEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQRYTISSNPHFHVLTRNRSEGR 188
Query: 190 IYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEV 249
+PELVLD+ LD E++ +LRLTL A+DGGSPP+SGT+ + I+VLDINDN PEF Q LYE
Sbjct: 189 KFPELVLDKPLDREEQPQLRLTLIALDGGSPPRSGTSEIQIQVLDINDNVPEFAQELYEA 248
Query: 250 QVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDF 309
QVPE+ PLGS + T+SA+DLDAG++GK+SY F +D+ + FEIN I+GE+ LR LDF
Sbjct: 249 QVPENNPLGSLVITVSARDLDAGSFGKVSYALFQV-DDVNQPFEINAITGEIRLRKALDF 307
Query: 310 EVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASETLVALFS 369
E IQSY ++++ATDGGGLSGKC+L+V+V+D+NDN PE+T+S IPEN E VA+FS
Sbjct: 308 EEIQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISLIPENLPEITVAVFS 367
Query: 370 ILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGTP 429
+ D DSG N ++ICSI++NLPF L+P+ +NF+TLV+E ALDRES+AEYNITITVTDLGTP
Sbjct: 368 VSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITVTDLGTP 427
Query: 430 RLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYS 489
RLKT+ +ITV +SDVNDN P FTQTSYTLFVRENNSPALHIGSVSATDRDSG NAQV YS
Sbjct: 428 RLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGINAQVTYS 487
Query: 490 LLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVRV 549
LLPPQD HLPL+SLVSINADNGHLFALRSLDYEALQ FEFRVGATDRGSPALSSEALVR+
Sbjct: 488 LLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATDRGSPALSSEALVRL 547
Query: 550 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 609
LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA
Sbjct: 548 LVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKA 607
Query: 610 TEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 669
TE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP
Sbjct: 608 TELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQP 667
Query: 670 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRCSVPE 729
YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGR SVPE
Sbjct: 668 YLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRYSVPE 727
Query: 730 GPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDTGRNMGEIENF 789
GPFPGHLVDVSGTGTLSQSYQY+VCLTGGS TNEFKFLKPI+PNF T R M E
Sbjct: 728 GPFPGHLVDVSGTGTLSQSYQYKVCLTGGSETNEFKFLKPIMPNFPPQGTEREMEETPTS 787
Query: 790 RNSF 793
RNSF
Sbjct: 788 RNSF 791
>gi|11276081 protocadherin beta 8 precursor [Homo sapiens]
Length = 801
Score = 1165 bits (3015), Expect = 0.0
Identities = 587/799 (73%), Positives = 672/799 (84%), Gaps = 1/799 (0%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGT-ESAHYSVAEETEIGSFVANLARDLGLGVEEL 59
ME G L R+RQVL +LLGLS AG E YSV EETE SFV NLA+DLGL E
Sbjct: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
Query: 60 SSREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRF 119
S R RVVS NK +L L+ T +LLLNEKLDR++LCG TEPCVL FQV+LE+P +FF+
Sbjct: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
Query: 120 ELCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFY 179
EL V DINDHSP FLDK++L+K+SE + G F +++A+DLD+G N+++NY ISPNS+F
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTAFPLKNAEDLDIGQNNIENYIISPNSYFR 180
Query: 180 IKIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNA 239
+ SD + YPELVLD ALD E+EAELRLTLTA+DGGSPP+SGT V I+V+D+NDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNA 240
Query: 240 PEFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISG 299
PEF Q Y VQ+ ED P+ + +SA D+D G G+ISY+ F AS++I KTF+++ ++G
Sbjct: 241 PEFQQPFYRVQISEDSPISFLVVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTG 300
Query: 300 EVNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPEN 359
E+ L+ LDFE QSY +NI+A D GG SGKCT+L++V+D+ND+ PEVT+S+ T IPEN
Sbjct: 301 EIRLKKQLDFEKFQSYEVNIEARDAGGFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
Query: 360 ASETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNI 419
A ET+VALFS+ D DSG+NG++ CSIQ++LPF LK + NF+TL++E LDRES+AEYN+
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSSVGNFYTLLTETPLDRESRAEYNV 420
Query: 420 TITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479
TITVTDLGTPRL T N+TVL+SDVNDNAP FTQTSYTLFVRENNSPALHIGSVSATDRD
Sbjct: 421 TITVTDLGTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRD 480
Query: 480 SGTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSP 539
SGTNAQV YSLLPPQD HLPLASLVSIN DNGHLFALRSLDYEALQ FEFRVGA+DRGSP
Sbjct: 481 SGTNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSP 540
Query: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 541 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 600
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAK RLVVLVKDNGEPP SATATLH
Sbjct: 601 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKQRLVVLVKDNGEPPCSATATLH 660
Query: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
+LLVDGFSQPYLPLPEAAPAQ QADSLTVYLVVALASVSSLFLFSVLLFVAV LCRRSRA
Sbjct: 661 LLLVDGFSQPYLPLPEAAPAQGQADSLTVYLVVALASVSSLFLFSVLLFVAVLLCRRSRA 720
Query: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDT 779
ASVGRCSVPEGPFPGHLVDV GTG+LSQ+YQYEVCL GGSGTNEF+FLKP++PN Q H
Sbjct: 721 ASVGRCSVPEGPFPGHLVDVRGTGSLSQNYQYEVCLAGGSGTNEFQFLKPVLPNIQGHSF 780
Query: 780 GRNMGEIENFRNSFGLNIQ 798
G M + NFRN FG ++Q
Sbjct: 781 GPEMEQNSNFRNGFGFSLQ 799
>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
Length = 798
Score = 1159 bits (2999), Expect = 0.0
Identities = 591/799 (73%), Positives = 672/799 (84%), Gaps = 2/799 (0%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGT-ESAHYSVAEETEIGSFVANLARDLGLGVEEL 59
ME G L R+RQVL +LLGLS AG E YSV EETE SFV NLA+DLGL E
Sbjct: 1 MEASGKLICRQRQVLFSFLLLGLSLAGAAEPRSYSVVEETEGSSFVTNLAKDLGLEQREF 60
Query: 60 SSREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRF 119
S R RVVS NK +L L+ T +LLLNEKLDR++LCG TEPCVL FQV+LE+P +FF+
Sbjct: 61 SRRGVRVVSRGNKLHLQLNQETADLLLNEKLDREDLCGHTEPCVLRFQVLLESPFEFFQA 120
Query: 120 ELCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFY 179
EL V DINDHSP FLDK++L+K+SE + G TF +++A+DLDVG N+++NY ISPNS+F
Sbjct: 121 ELQVIDINDHSPVFLDKQMLVKVSESSPPGTTFPLKNAEDLDVGQNNIENYIISPNSYFR 180
Query: 180 IKIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNA 239
+ SD + YPELVLD+ALD E+EAELRLTLTA+DGGSPP+SGT V I+VLD+NDNA
Sbjct: 181 VLTRKRSDGRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNA 240
Query: 240 PEFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISG 299
PEF Q Y VQ+ ED P+G + +SA D+D G G+ISY+ F ASE+I KTF+INP++G
Sbjct: 241 PEFEQPFYRVQISEDSPVGFLVVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTG 300
Query: 300 EVNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPEN 359
E+ L+ LDFE +QSY +NI+A D G SGKCT+L++V+D+ND+ PEVT+S+ T IPEN
Sbjct: 301 EIELKKQLDFEKLQSYEVNIEARDAGTFSGKCTVLIQVIDVNDHAPEVTMSAFTSPIPEN 360
Query: 360 ASETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNI 419
A ET+VALFS+ D DSG+NG++ CSIQ++LPF LK +NF+TL++E+ LDRES+AEYNI
Sbjct: 361 APETVVALFSVSDLDSGENGKISCSIQEDLPFLLKSA-ENFYTLLTERPLDRESRAEYNI 419
Query: 420 TITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479
TITVTDLGTP L T+ N+TVL++DVNDNAP FTQTSYTLFVRENNSPALHI SVSATDRD
Sbjct: 420 TITVTDLGTPMLITQLNMTVLIADVNDNAPAFTQTSYTLFVRENNSPALHIRSVSATDRD 479
Query: 480 SGTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSP 539
SGTNAQV YSLLPPQD HLPL SLVSINADNGHLFALRSLDYEALQ F+FRVGA+D GSP
Sbjct: 480 SGTNAQVTYSLLPPQDPHLPLTSLVSINADNGHLFALRSLDYEALQGFQFRVGASDHGSP 539
Query: 540 ALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
ALSSEALVRV+VLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN
Sbjct: 540 ALSSEALVRVVVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQN 599
Query: 600 AWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
AWLSYQLLKATE GLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH
Sbjct: 600 AWLSYQLLKATELGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLH 659
Query: 660 VLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
VLLVDGFSQPYLPLPEAAP QAQAD LTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA
Sbjct: 660 VLLVDGFSQPYLPLPEAAPTQAQADLLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRA 719
Query: 720 ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQVHDT 779
ASVGRC VPEGP PGHLVD+SGT TLSQSYQYEVCL GGSGTNEFKFLKPIIPNF
Sbjct: 720 ASVGRCLVPEGPLPGHLVDMSGTRTLSQSYQYEVCLAGGSGTNEFKFLKPIIPNFPPQCP 779
Query: 780 GRNMGEIENFRNSFGLNIQ 798
G+ + F N+FG NIQ
Sbjct: 780 GKEIQGNSTFPNNFGFNIQ 798
>gi|14195607 protocadherin beta 1 precursor [Homo sapiens]
Length = 818
Score = 778 bits (2008), Expect = 0.0
Identities = 402/777 (51%), Positives = 546/777 (70%), Gaps = 5/777 (0%)
Query: 9 LRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVS 68
L+ RQV L+ L +S + YSVAEE E GSFVAN+A+DLGL V +L++R AR+VS
Sbjct: 9 LQNRQVGSLLIFLCISVGDATTIRYSVAEEMESGSFVANVAKDLGLEVGKLAARGARLVS 68
Query: 69 DDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDIND 128
+ NK + L TG+L + EKLDR+ LCG +PCVLHF+VVL PLQ FR E+ V DIND
Sbjct: 69 EGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEVVLVEPLQSFRAEVRVFDIND 128
Query: 129 HSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDR 188
++P FL+KE L+KI E T +G+ F ++SAQDLDVG N LQNYT+S N +F++ S
Sbjct: 129 NAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHLHTRFCSHG 188
Query: 189 KIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYE 248
Y ELVL++ LD E++ E+ LT+TAVDGGSPPKSGT + + VLD+ND+ P+F + +Y
Sbjct: 189 PKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYR 248
Query: 249 VQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLD 308
QV E+ P GS +AT++A DLD G I+Y+ E I KTF+I+P +GEV LR PLD
Sbjct: 249 AQVSENSPNGSLVATVTAVDLDEGTNKAITYSLAQNPEAILKTFQIDPQNGEVRLRGPLD 308
Query: 309 FEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENAS-ETLVAL 367
FE I++Y I+IQATDGGGLS +LV+V+D+NDNPPEV +SS++ +PE++ +T+VAL
Sbjct: 309 FEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDSPPQTVVAL 368
Query: 368 FSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLG 427
F+I D+D G++ C ++++LPF +KPTF N ++LV++++LDRE + YNITI D G
Sbjct: 369 FTIRDRDIRVGGKVTCFLREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNITIVAMDTG 428
Query: 428 TPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVN 487
P L E I VL+SDVNDN P F + SY L VRENNSPA+ IG V A D D G NAQ+
Sbjct: 429 PPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGKVHAEDLDLGENAQIT 488
Query: 488 YSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALV 547
YSLLPP++ L + + +SIN+ NG L+ALR++DYEA+Q+F+F V ATD G +LSS+ V
Sbjct: 489 YSLLPPKNGDLSVFAYISINSGNGKLYALRTMDYEAIQDFQFVVKATDGGFLSLSSQVTV 548
Query: 548 RVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
RV+VLD NDN P +LYPLQNG+ PC +LVPR+AE GYLVTKVVAVDGDSGQN+WLSY LL
Sbjct: 549 RVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQNSWLSYHLL 608
Query: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 667
KAT+ GLF V NGE+ T R +SERD +L++LV+D+G+P S T +L++LLVDGFS
Sbjct: 609 KATDLGLFSVQRQNGEIHTLRQISERDPMMQKLIILVQDHGQPALSTTVSLNILLVDGFS 668
Query: 668 QPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR---AASVGR 724
+PYL + + + T YLV++L +S LFL SV++ + + ++ + ++
Sbjct: 669 EPYLQFQDPTKHSRKVNPSTKYLVISLVILSFLFLLSVIVIFIIHVYQKIKYREKFTIQE 728
Query: 725 CSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFQV-HDTG 780
+ F +LV G G+LS+ YE+C G+G +EF+FLK +PNF H TG
Sbjct: 729 HFYDDCNFSNNLVQGQGNGSLSRPCPYEMCSATGTGNSEFRFLKRFMPNFPFPHATG 785
>gi|11056032 protocadherin gamma subfamily A, 1 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 645 bits (1665), Expect = 0.0
Identities = 356/777 (45%), Positives = 494/777 (63%), Gaps = 12/777 (1%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
M+I+ L R +L+ L L L AG + HYSV EET+ GSFV N+A+DLGL +EL+
Sbjct: 1 MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
R+VS L+ +G+L+ ++DR+ELC + PC++ F +++E+ ++ F E
Sbjct: 61 DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
+ + DIND++P F +E+ K++E TT G + QDLDVG NSLQ+Y +S N HF +
Sbjct: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
+ +D +PE+VL LD E+EA L LTA DGG P +SGT + I+V+D NDN P
Sbjct: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
F Q+ Y + VPE+ PLG+ + ++A D D G G+++Y+F + + + F ++ +GE
Sbjct: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPEN- 359
++ + PLDFE + Y++ +QA DG GL K +L+KV+D+NDN PEVTI+S+T +PEN
Sbjct: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360
Query: 360 ASETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNI 419
T++AL S+ DQDSGDNG C I NLPF L+ N++ LV+E+ LDRE + YNI
Sbjct: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420
Query: 420 TITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479
TIT D GTP L TE +I++L++D+NDN+P F Q SY+ ++ ENN I SV A D D
Sbjct: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480
Query: 480 SGTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSP 539
S NAQ+ YSL+ + PL++ +SIN+D G L+ALRS DYE ++ + +V A D G P
Sbjct: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540
Query: 540 ALSSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQ 598
LSS + + +LD NDN+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQ
Sbjct: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600
Query: 599 NAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL 658
NAWLSY+LLKA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 659 HVLLVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR-- 715
V + D S L P+ DS LT+YLVVA A+VS +FL V++ +A RL R
Sbjct: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 716 RSR---AASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 769
+SR A+ G S+P H V V G Q+Y +EV LT S + F +P
Sbjct: 721 KSRLLQASGGGLASMP----GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196459 protocadherin gamma subfamily A, 1 isoform 2 precursor
[Homo sapiens]
Length = 823
Score = 645 bits (1665), Expect = 0.0
Identities = 356/777 (45%), Positives = 494/777 (63%), Gaps = 12/777 (1%)
Query: 1 MEIRGALDLRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELS 60
M+I+ L R +L+ L L L AG + HYSV EET+ GSFV N+A+DLGL +EL+
Sbjct: 1 MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELA 60
Query: 61 SREARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFE 120
R+VS L+ +G+L+ ++DR+ELC + PC++ F +++E+ ++ F E
Sbjct: 61 DGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPCLVSFNILVEDKMKLFPVE 120
Query: 121 LCVKDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYI 180
+ + DIND++P F +E+ K++E TT G + QDLDVG NSLQ+Y +S N HF +
Sbjct: 121 VEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSL 180
Query: 181 KIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAP 240
+ +D +PE+VL LD E+EA L LTA DGG P +SGT + I+V+D NDN P
Sbjct: 181 DVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPP 240
Query: 241 EFPQSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGE 300
F Q+ Y + VPE+ PLG+ + ++A D D G G+++Y+F + + + F ++ +GE
Sbjct: 241 AFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300
Query: 301 VNLRSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPEN- 359
++ + PLDFE + Y++ +QA DG GL K +L+KV+D+NDN PEVTI+S+T +PEN
Sbjct: 301 ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENF 360
Query: 360 ASETLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNI 419
T++AL S+ DQDSGDNG C I NLPF L+ N++ LV+E+ LDRE + YNI
Sbjct: 361 PPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDNYYRLVTERTLDRELISGYNI 420
Query: 420 TITVTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRD 479
TIT D GTP L TE +I++L++D+NDN+P F Q SY+ ++ ENN I SV A D D
Sbjct: 421 TITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLD 480
Query: 480 SGTNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSP 539
S NAQ+ YSL+ + PL++ +SIN+D G L+ALRS DYE ++ + +V A D G P
Sbjct: 481 SNENAQITYSLIEDTIQGAPLSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDP 540
Query: 540 ALSSEALVRVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQ 598
LSS + + +LD NDN+P +LYP L + EL P +AEPGYLVTKVVAVD DSGQ
Sbjct: 541 PLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600
Query: 599 NAWLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATL 658
NAWLSY+LLKA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL
Sbjct: 601 NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL 660
Query: 659 HVLLVDGFSQPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR-- 715
V + D S L P+ DS LT+YLVVA A+VS +FL V++ +A RL R
Sbjct: 661 TVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWH 720
Query: 716 RSR---AASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 769
+SR A+ G S+P H V V G Q+Y +EV LT S + F +P
Sbjct: 721 KSRLLQASGGGLASMP----GSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11128043 protocadherin gamma subfamily A, 9 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 624 bits (1609), Expect = e-178
Identities = 348/769 (45%), Positives = 481/769 (62%), Gaps = 12/769 (1%)
Query: 9 LRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVS 68
LR R VL+ +L L A YSV EETE G V N+++DL L EL+ R R+VS
Sbjct: 9 LRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVS 68
Query: 69 DDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDIND 128
+ L+ +G L+ ++DR+ELC + C+++F+V++E+ ++ + E+ V DIND
Sbjct: 69 RGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDIND 128
Query: 129 HSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDR 188
+P F + + +KI+E GA + + A D DVG NSLQ+Y +SPN HF + + +
Sbjct: 129 SAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNG 188
Query: 189 KIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYE 248
I PELVL+RALD E+ L LTA DGG P +S T + + VLD NDNAP F Q +Y
Sbjct: 189 AINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYR 248
Query: 249 VQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLD 308
V+V E+ P G+W+ T +A DLD G GK++Y F+ +E F++N +GE++ LD
Sbjct: 249 VKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLD 308
Query: 309 FEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASE-TLVAL 367
+E Y + IQA DGGGL G +L+ V D+NDN PEVTI+S+ + E+A + T++ L
Sbjct: 309 YEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILL 368
Query: 368 FSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLG 427
F+ D+DSG NG+++CSIQ+NL F L+ + ++++ L++ + LDRE +EYNIT+T TD G
Sbjct: 369 FNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRG 428
Query: 428 TPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVN 487
TP L TE +IT+ ++D+NDN P F+Q SY++++ ENN+ I SV A D DS N++V
Sbjct: 429 TPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVI 488
Query: 488 YSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALV 547
YSL + PL++ VSIN+D G L+AL S DYE ++ + +V A+D GSP LSS +
Sbjct: 489 YSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSL 548
Query: 548 RVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 606
R+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L
Sbjct: 549 RLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
Query: 607 LKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGF 666
KA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D
Sbjct: 609 FKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSI 668
Query: 667 SQPYLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRL-----CRRSRAA 720
L PA +A LT+YLVVA+A VS +FL V+ +A+RL RA
Sbjct: 669 PDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRAT 728
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 769
S G VP H V V G Q+Y E LT S + F +P
Sbjct: 729 SDGLAGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQP 773
>gi|14270487 protocadherin gamma subfamily A, 9 isoform 2 precursor
[Homo sapiens]
Length = 828
Score = 624 bits (1609), Expect = e-178
Identities = 348/769 (45%), Positives = 481/769 (62%), Gaps = 12/769 (1%)
Query: 9 LRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVS 68
LR R VL+ +L L A YSV EETE G V N+++DL L EL+ R R+VS
Sbjct: 9 LRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYIVGNISKDLALEPRELAERRVRIVS 68
Query: 69 DDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDIND 128
+ L+ +G L+ ++DR+ELC + C+++F+V++E+ ++ + E+ V DIND
Sbjct: 69 RGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRCLVNFKVLVEDRVKLYGIEIEVTDIND 128
Query: 129 HSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDR 188
+P F + + +KI+E GA + + A D DVG NSLQ+Y +SPN HF + + +
Sbjct: 129 SAPKFQAESLEVKINEIAVPGARYPLPEAIDPDVGVNSLQSYQLSPNHHFSLNVQTGDNG 188
Query: 189 KIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYE 248
I PELVL+RALD E+ L LTA DGG P +S T + + VLD NDNAP F Q +Y
Sbjct: 189 AINPELVLERALDREEATAHHLVLTASDGGEPRRSSTVRIHVTVLDTNDNAPVFAQRIYR 248
Query: 249 VQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLD 308
V+V E+ P G+W+ T +A DLD G GK++Y F+ +E F++N +GE++ LD
Sbjct: 249 VKVLENVPPGTWLLTATASDLDEGINGKVAYKFWKINEKQSLLFQLNENTGEISTAKSLD 308
Query: 309 FEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASE-TLVAL 367
+E Y + IQA DGGGL G +L+ V D+NDN PEVTI+S+ + E+A + T++ L
Sbjct: 309 YEECSFYEMEIQAEDGGGLKGWTKVLISVEDVNDNRPEVTITSLFSPVREDAPQGTVILL 368
Query: 368 FSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLG 427
F+ D+DSG NG+++CSIQ+NL F L+ + ++++ L++ + LDRE +EYNIT+T TD G
Sbjct: 369 FNAHDRDSGKNGQVVCSIQENLSFTLENSEEDYYRLLTAQILDREKASEYNITVTATDRG 428
Query: 428 TPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVN 487
TP L TE +IT+ ++D+NDN P F+Q SY++++ ENN+ I SV A D DS N++V
Sbjct: 429 TPPLSTEIHITLQVTDINDNPPAFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVI 488
Query: 488 YSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALV 547
YSL + PL++ VSIN+D G L+AL S DYE ++ + +V A+D GSP LSS +
Sbjct: 489 YSLAEDTIQGSPLSTYVSINSDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSL 548
Query: 548 RVLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQL 606
R+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+L
Sbjct: 549 RLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRL 608
Query: 607 LKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGF 666
KA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D
Sbjct: 609 FKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSI 668
Query: 667 SQPYLPLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRL-----CRRSRAA 720
L PA +A LT+YLVVA+A VS +FL V+ +A+RL RA
Sbjct: 669 PDILADLGSLQIPADLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRAT 728
Query: 721 SVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 769
S G VP H V V G Q+Y E LT S + F +P
Sbjct: 729 SDGLAGVP----TSHFVGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQP 773
>gi|14270505 protocadherin gamma subfamily B, 5 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 621 bits (1601), Expect = e-178
Identities = 359/777 (46%), Positives = 480/777 (61%), Gaps = 31/777 (3%)
Query: 5 GALDLRKRQVLIFLVLLGL-SRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSRE 63
G L +R ++FL LL L A E Y + EE GS V NLA DLG V+EL +R+
Sbjct: 6 GELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRK 65
Query: 64 ARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCV 123
RV S+ K Y + +G LL++ +LDR+E+CG C L F+ V ENPL F+ + +
Sbjct: 66 LRVSSE--KPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEI 123
Query: 124 KDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIP 183
+DINDH+P F ++ISE G F++E A+D D+G NSLQ Y +S N F + I
Sbjct: 124 EDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIK 183
Query: 184 DSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFP 243
+ D YPEL L++ LD EQ++ RL LTA+DGG PP SGTT + I+V D NDN P F
Sbjct: 184 EKQDGSKYPELALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFN 243
Query: 244 QSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNL 303
+ +Y V + E+ P G+ + +SA D D G +I+Y+F+ + F +N SGE+
Sbjct: 244 RDVYRVSLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQ----IFSLNSKSGEITT 299
Query: 304 RSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASE- 362
+ LDFE + Y++ ++ DGGGL +CT+ + + D NDN PEVT S+ + I ENA
Sbjct: 300 QKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPG 359
Query: 363 TLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITIT 422
TL+AL I DQDSG+NG + C +Q +PF + + KN + LV++ LDRE EYN+TIT
Sbjct: 360 TLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTIT 419
Query: 423 VTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGT 482
TD G P L + ++ + + DVNDNAP F Q SY + V ENN P I V A+D D G
Sbjct: 420 ATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGL 479
Query: 483 NAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALS 542
N QV+YS++ L LAS VS++A +G +FA R+ DYE L+ FE + A D+GSPALS
Sbjct: 480 NGQVSYSIMASDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALS 539
Query: 543 SEALVRVLVLDANDNSPFVLYPL--QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
+ +RVLV D NDN+P VLYP +GSA ++VPRAAEPGYLVTKVVAVD DSG NA
Sbjct: 540 ANVSLRVLVGDRNDNAPRVLYPALGPDGSA-LFDMVPRAAEPGYLVTKVVAVDADSGHNA 598
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSY +L+A+EPGLF + GEVRTAR L +RDAA+ RL+V V+D G+PP SATATLH+
Sbjct: 599 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL 658
Query: 661 LLVDGFSQPYLP--LPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR 718
+ D Q LP P+ QA+ L YLVVALA +S LFL +V+L VA+RL RRS
Sbjct: 659 VFADSL-QEVLPDITDRPVPSDPQAE-LQFYLVVALALISVLFLLAVILAVALRL-RRSS 715
Query: 719 AASVGRCSVP-----EGPF--PGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLK 768
+ + C P GP P + GTL Y Y +C+ +G EF FLK
Sbjct: 716 SPAAWSCFQPGLCVKSGPVVPPNY-----SQGTL--PYSYNLCV-AHTGKTEFNFLK 764
>gi|11128031 protocadherin gamma subfamily B, 5 isoform 1 precursor
[Homo sapiens]
Length = 923
Score = 621 bits (1601), Expect = e-178
Identities = 359/777 (46%), Positives = 480/777 (61%), Gaps = 31/777 (3%)
Query: 5 GALDLRKRQVLIFLVLLGL-SRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSRE 63
G L +R ++FL LL L A E Y + EE GS V NLA DLG V+EL +R+
Sbjct: 6 GELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKGSVVGNLATDLGFSVQELPTRK 65
Query: 64 ARVVSDDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCV 123
RV S+ K Y + +G LL++ +LDR+E+CG C L F+ V ENPL F+ + +
Sbjct: 66 LRVSSE--KPYFTVSAESGELLVSSRLDREEICGKKPACALEFEAVAENPLNFYHVNVEI 123
Query: 124 KDINDHSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIP 183
+DINDH+P F ++ISE G F++E A+D D+G NSLQ Y +S N F + I
Sbjct: 124 EDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDADIGLNSLQKYKLSLNPSFSLIIK 183
Query: 184 DSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFP 243
+ D YPEL L++ LD EQ++ RL LTA+DGG PP SGTT + I+V D NDN P F
Sbjct: 184 EKQDGSKYPELALEKTLDREQQSYHRLVLTALDGGHPPLSGTTELRIQVTDANDNPPVFN 243
Query: 244 QSLYEVQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNL 303
+ +Y V + E+ P G+ + +SA D D G +I+Y+F+ + F +N SGE+
Sbjct: 244 RDVYRVSLRENVPPGTTVLQVSATDQDEGINSEITYSFYRTGQ----IFSLNSKSGEITT 299
Query: 304 RSPLDFEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASE- 362
+ LDFE + Y++ ++ DGGGL +CT+ + + D NDN PEVT S+ + I ENA
Sbjct: 300 QKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQDENDNSPEVTFHSLLEMILENAVPG 359
Query: 363 TLVALFSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITIT 422
TL+AL I DQDSG+NG + C +Q +PF + + KN + LV++ LDRE EYN+TIT
Sbjct: 360 TLIALIKIHDQDSGENGEVNCQLQGEVPFKIISSSKNSYKLVTDGTLDREQTPEYNVTIT 419
Query: 423 VTDLGTPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGT 482
TD G P L + ++ + + DVNDNAP F Q SY + V ENN P I V A+D D G
Sbjct: 420 ATDRGKPPLSSSISVILHIRDVNDNAPVFHQASYLVSVPENNPPGASIAQVCASDLDLGL 479
Query: 483 NAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALS 542
N QV+YS++ L LAS VS++A +G +FA R+ DYE L+ FE + A D+GSPALS
Sbjct: 480 NGQVSYSIMASDLEPLALASYVSMSAQSGVVFAQRAFDYEQLRTFELTLQARDQGSPALS 539
Query: 543 SEALVRVLVLDANDNSPFVLYPL--QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNA 600
+ +RVLV D NDN+P VLYP +GSA ++VPRAAEPGYLVTKVVAVD DSG NA
Sbjct: 540 ANVSLRVLVGDRNDNAPRVLYPALGPDGSA-LFDMVPRAAEPGYLVTKVVAVDADSGHNA 598
Query: 601 WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHV 660
WLSY +L+A+EPGLF + GEVRTAR L +RDAA+ RL+V V+D G+PP SATATLH+
Sbjct: 599 WLSYHVLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHL 658
Query: 661 LLVDGFSQPYLP--LPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSR 718
+ D Q LP P+ QA+ L YLVVALA +S LFL +V+L VA+RL RRS
Sbjct: 659 VFADSL-QEVLPDITDRPVPSDPQAE-LQFYLVVALALISVLFLLAVILAVALRL-RRSS 715
Query: 719 AASVGRCSVP-----EGPF--PGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLK 768
+ + C P GP P + GTL Y Y +C+ +G EF FLK
Sbjct: 716 SPAAWSCFQPGLCVKSGPVVPPNY-----SQGTL--PYSYNLCV-AHTGKTEFNFLK 764
>gi|11128035 protocadherin gamma subfamily B, 2 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 620 bits (1599), Expect = e-177
Identities = 342/765 (44%), Positives = 482/765 (63%), Gaps = 13/765 (1%)
Query: 9 LRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVS 68
+R QVL+ +L A YS+ EE S V NLA+DLGL V +L +R+ RV +
Sbjct: 11 VRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSA 70
Query: 69 DDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDIND 128
+ K+Y ++ +G+LL+++++DR+++CG CVL F V ENPL F + V+DIND
Sbjct: 71 E--KEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDIND 128
Query: 129 HSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDR 188
++P F +I +KI E T G TF ++ A D DVG NSLQ Y ++ N +F + + D
Sbjct: 129 NTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDG 188
Query: 189 KIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYE 248
+ YPEL+L +LD E+ + +L LTAVDGG PP+SGTT + IKV D NDN P F Q +Y
Sbjct: 189 RKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYR 248
Query: 249 VQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLD 308
V + ED P G ++ ++A D D G +I+Y+F + E ++ F +N +GE+ + LD
Sbjct: 249 VTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLD 308
Query: 309 FEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASE-TLVAL 367
FE+ SYT++I+A D G L+ C++ V+++D ND PEV ++S++ +PE++ T++AL
Sbjct: 309 FEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIAL 368
Query: 368 FSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLG 427
D+DSG+NG + C + N F LK + KN++ LV++ ALDRE EYN+TIT TD G
Sbjct: 369 IKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGG 428
Query: 428 TPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVN 487
P L + +T+ +SDVNDNAP F QTSY + V ENN P I +SA+D D G + QV+
Sbjct: 429 KPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVS 488
Query: 488 YSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALV 547
YS++ + + S VS++A +G +FA R+ D+E L+ FE + A D+GSPALS+ +
Sbjct: 489 YSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSL 548
Query: 548 RVLVLDANDNSPFVLYPL--QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 605
RVLV D NDN+P VLYP +GSA ++VPRAAEPGYLVTKVVAVD DSG NAWLSY
Sbjct: 549 RVLVGDLNDNAPRVLYPALGPDGSA-LFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYH 607
Query: 606 LLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDG 665
+L+A+EPGLF + GEVRTAR L +RDAA+ RL+V V+D G+PP SATATLH++ D
Sbjct: 608 VLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADS 667
Query: 666 FSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC 725
+ L + L YLVVALA +S LF +V+L +++RL R S + C
Sbjct: 668 LQEVLPDLSDRREPSDPQAKLQFYLVVALALISVLFFLAVILAISLRL-RLSSRSDAWDC 726
Query: 726 SVP---EGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFL 767
P P PG L + S GTL Y Y +C+ S EF FL
Sbjct: 727 FQPGLSSKPGPGVLPNYS-EGTL--PYSYNLCVASQSAKTEFNFL 768
>gi|14270493 protocadherin gamma subfamily B, 2 isoform 2 precursor
[Homo sapiens]
Length = 811
Score = 620 bits (1599), Expect = e-177
Identities = 342/765 (44%), Positives = 482/765 (63%), Gaps = 13/765 (1%)
Query: 9 LRKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVS 68
+R QVL+ +L A YS+ EE S V NLA+DLGL V +L +R+ RV +
Sbjct: 11 VRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKNSVVGNLAKDLGLSVRDLPARKLRVSA 70
Query: 69 DDNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDIND 128
+ K+Y ++ +G+LL+++++DR+++CG CVL F V ENPL F + V+DIND
Sbjct: 71 E--KEYFTVNPESGDLLVSDRIDREQICGKQPLCVLDFDTVAENPLNIFYIAVIVQDIND 128
Query: 129 HSPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDR 188
++P F +I +KI E T G TF ++ A D DVG NSLQ Y ++ N +F + + D
Sbjct: 129 NTPLFKQTKINLKIGESTKPGTTFPLDPALDSDVGPNSLQRYHLNDNEYFDLAEKQTPDG 188
Query: 189 KIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYE 248
+ YPEL+L +LD E+ + +L LTAVDGG PP+SGTT + IKV D NDN P F Q +Y
Sbjct: 189 RKYPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYR 248
Query: 249 VQVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLD 308
V + ED P G ++ ++A D D G +I+Y+F + E ++ F +N +GE+ + LD
Sbjct: 249 VTLREDVPPGFFVLQVTATDRDEGINAEITYSFHNVDEQVKHFFNLNEKTGEITTKDDLD 308
Query: 309 FEVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASE-TLVAL 367
FE+ SYT++I+A D G L+ C++ V+++D ND PEV ++S++ +PE++ T++AL
Sbjct: 309 FEIASSYTLSIEAKDPGDLAAHCSIQVEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIAL 368
Query: 368 FSILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLG 427
D+DSG+NG + C + N F LK + KN++ LV++ ALDRE EYN+TIT TD G
Sbjct: 369 IKTRDRDSGENGEVYCQVLGNAKFILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGG 428
Query: 428 TPRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVN 487
P L + +T+ +SDVNDNAP F QTSY + V ENN P I +SA+D D G + QV+
Sbjct: 429 KPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVS 488
Query: 488 YSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALV 547
YS++ + + S VS++A +G +FA R+ D+E L+ FE + A D+GSPALS+ +
Sbjct: 489 YSIVASDLKPREILSYVSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSL 548
Query: 548 RVLVLDANDNSPFVLYPL--QNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQ 605
RVLV D NDN+P VLYP +GSA ++VPRAAEPGYLVTKVVAVD DSG NAWLSY
Sbjct: 549 RVLVGDLNDNAPRVLYPALGPDGSA-LFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYH 607
Query: 606 LLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDG 665
+L+A+EPGLF + GEVRTAR L +RDAA+ RL+V V+D G+PP SATATLH++ D
Sbjct: 608 VLQASEPGLFSLGLRTGEVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADS 667
Query: 666 FSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCRRSRAASVGRC 725
+ L + L YLVVALA +S LF +V+L +++RL R S + C
Sbjct: 668 LQEVLPDLSDRREPSDPQAKLQFYLVVALALISVLFFLAVILAISLRL-RLSSRSDAWDC 726
Query: 726 SVP---EGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFL 767
P P PG L + S GTL Y Y +C+ S EF FL
Sbjct: 727 FQPGLSSKPGPGVLPNYS-EGTL--PYSYNLCVASQSAKTEFNFL 768
>gi|11056065 protocadherin gamma subfamily A, 6 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 619 bits (1596), Expect = e-177
Identities = 344/768 (44%), Positives = 481/768 (62%), Gaps = 12/768 (1%)
Query: 10 RKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVSD 69
R QVL+ +L L A YS+ EE E GSFV N+ +DLGL +EL+ R+VS
Sbjct: 10 RSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSR 69
Query: 70 DNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDINDH 129
+ L+ G+L+ ++DR+ELC + C++ F +++E+ L + E+ + DIND+
Sbjct: 70 GRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDN 129
Query: 130 SPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDRK 189
+P FL +E+ +KI E + F + D DVG NSLQ + +S NSHF + + +
Sbjct: 130 TPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGP 189
Query: 190 IYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEV 249
YPELVL+ LD E EA RL LTA+DGG P +S +L+ VLD+NDN P F Q +Y V
Sbjct: 190 KYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRV 249
Query: 250 QVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDF 309
VPE+ P+G+ + ++A D D G +G+++Y+F +E I + F +N ++GE++ + LD+
Sbjct: 250 SVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDY 309
Query: 310 EVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASE-TLVALF 368
E Y + ++A DG GL + +L+ ++D+NDN PEV ++S ++ I E+A T++ALF
Sbjct: 310 EDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALF 369
Query: 369 SILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGT 428
+ D+DSG NG + CSI +LPF L+ + N++ LV+ ALDRE YNIT+T TD GT
Sbjct: 370 QVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGT 429
Query: 429 PRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNY 488
P L TE I++ ++D NDN PTF +SY+++V ENN I SV+A D D NAQV+Y
Sbjct: 430 PPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSY 489
Query: 489 SLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVR 548
SL + PL+S VSIN+D G L+ALRS DYE L++ + V A+D G P LSS +
Sbjct: 490 SLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLS 549
Query: 549 VLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LL
Sbjct: 550 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 609
Query: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 667
KA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIP 669
Query: 668 QPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AAS 721
L P+ DS LT+YLVVA+A+VS +FL V++ +A+RL R +SR A+
Sbjct: 670 DILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASG 729
Query: 722 VGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 769
G S+P H V V G Q+Y +EV LT S + F +P
Sbjct: 730 GGLASMP----GSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196474 protocadherin gamma subfamily A, 6 isoform 2 precursor
[Homo sapiens]
Length = 818
Score = 619 bits (1596), Expect = e-177
Identities = 344/768 (44%), Positives = 481/768 (62%), Gaps = 12/768 (1%)
Query: 10 RKRQVLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVSD 69
R QVL+ +L L A YS+ EE E GSFV N+ +DLGL +EL+ R+VS
Sbjct: 10 RSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSR 69
Query: 70 DNKKYLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDINDH 129
+ L+ G+L+ ++DR+ELC + C++ F +++E+ L + E+ + DIND+
Sbjct: 70 GRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVEVEIVDINDN 129
Query: 130 SPTFLDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDRK 189
+P FL +E+ +KI E + F + D DVG NSLQ + +S NSHF + + +
Sbjct: 130 TPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGP 189
Query: 190 IYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEV 249
YPELVL+ LD E EA RL LTA+DGG P +S +L+ VLD+NDN P F Q +Y V
Sbjct: 190 KYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRV 249
Query: 250 QVPEDRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDF 309
VPE+ P+G+ + ++A D D G +G+++Y+F +E I + F +N ++GE++ + LD+
Sbjct: 250 SVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGEISTSANLDY 309
Query: 310 EVIQSYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENASE-TLVALF 368
E Y + ++A DG GL + +L+ ++D+NDN PEV ++S ++ I E+A T++ALF
Sbjct: 310 EDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALF 369
Query: 369 SILDQDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGT 428
+ D+DSG NG + CSI +LPF L+ + N++ LV+ ALDRE YNIT+T TD GT
Sbjct: 370 QVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGT 429
Query: 429 PRLKTEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNY 488
P L TE I++ ++D NDN PTF +SY+++V ENN I SV+A D D NAQV+Y
Sbjct: 430 PPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSY 489
Query: 489 SLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVR 548
SL + PL+S VSIN+D G L+ALRS DYE L++ + V A+D G P LSS +
Sbjct: 490 SLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLS 549
Query: 549 VLVLDANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLL 607
+ VLD NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LL
Sbjct: 550 LFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLL 609
Query: 608 KATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFS 667
KA+EPGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT TL V + D
Sbjct: 610 KASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIP 669
Query: 668 QPYLPLPEAAPAQAQADS-LTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSR---AAS 721
L P+ DS LT+YLVVA+A+VS +FL V++ +A+RL R +SR A+
Sbjct: 670 DILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASG 729
Query: 722 VGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 769
G S+P H V V G Q+Y +EV LT S + F +P
Sbjct: 730 GGLASMP----GSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11056063 protocadherin gamma subfamily A, 7 isoform 1 precursor
[Homo sapiens]
Length = 932
Score = 617 bits (1592), Expect = e-176
Identities = 335/745 (44%), Positives = 475/745 (63%), Gaps = 12/745 (1%)
Query: 33 YSVAEETEIGSFVANLARDLGLGVEELSSREARVVSDDNKKYLHLDLLTGNLLLNEKLDR 92
YSV+EET+ GSFV ++A+DLGL EL+ R R++S + L+ +G+L+ ++DR
Sbjct: 33 YSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFALNQRSGSLVTAGRIDR 92
Query: 93 DELCGSTEPCVLHFQVVLENPLQFFRFELCVKDINDHSPTFLDKEILIKISEGTTVGATF 152
+E+C + C+++F +++E+ + + ++ + DIND+ P FL +EI +KI E T G F
Sbjct: 93 EEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEEINVKIMENTAPGVRF 152
Query: 153 LMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAELRLTL 212
+ A D DVG+NSLQ+Y +SPN HF + + D YPELVL+R LD E+E L L
Sbjct: 153 PLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLERVLDREEERVHHLVL 212
Query: 213 TAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPEDRPLGSWIATISAKDLDAG 272
TA DGG PP+S T + + V+D+ND+ P F Y+V VPE+ P+G+ + T+ A DLD G
Sbjct: 213 TASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEG 272
Query: 273 NYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQSYTINIQATDGGGLSGKCT 332
G+++Y+F + + K F +N ++GE++ LD+E Y + +QA DG G K
Sbjct: 273 VNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEMEVQAQDGPGSLTKAK 332
Query: 333 LLVKVMDINDNPPEVTISSITKRIPENAS-ETLVALFSILDQDSGDNGRMICSIQDNLPF 391
+L+ V+D+NDN PEVT++S++ IPE+ T++ALF + D+DSG NG + C+I +NLPF
Sbjct: 333 VLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIPENLPF 392
Query: 392 FLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGTPRLKTEYNITVLLSDVNDNAPTF 451
L+ + N++ LV+ K LDRE+ + YNIT+ TD GTP L E +I + ++D NDN PTF
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452
Query: 452 TQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLLPPQDRHLPLASLVSINADNG 511
+SY++++ ENN I V+A D DS NAQ+ YSL + P++S VSIN+D G
Sbjct: 453 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQGAPVSSYVSINSDTG 512
Query: 512 HLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYP-LQNGSA 570
L+AL+S DYE L+E + RV A D G P LSS + + VLD NDN P +LYP L +
Sbjct: 513 VLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQNDNPPEILYPALPTDGS 572
Query: 571 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 630
EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+EPGLF V + GEVRTAR L
Sbjct: 573 TGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLFAVGLYTGEVRTARAL 632
Query: 631 SERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQAD-SLTVY 689
+RDA K LVV V+D+G+PP SAT TL V + D + L P+ + LT+Y
Sbjct: 633 LDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLEPSDGPYNYDLTLY 692
Query: 690 LVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVGRCSVPEGPFPGHLVDVSGTGT 744
LVVA+A+VS +FL VL+ +A+RL R +SR A+ G +VP H V + G
Sbjct: 693 LVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVP----TSHFVGMDGVQA 748
Query: 745 LSQSYQYEVCLTGGSGTNEFKFLKP 769
Q+Y +EV LT S + F +P
Sbjct: 749 FLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196477 protocadherin gamma subfamily A, 7 isoform 2 precursor
[Homo sapiens]
Length = 817
Score = 617 bits (1592), Expect = e-176
Identities = 335/745 (44%), Positives = 475/745 (63%), Gaps = 12/745 (1%)
Query: 33 YSVAEETEIGSFVANLARDLGLGVEELSSREARVVSDDNKKYLHLDLLTGNLLLNEKLDR 92
YSV+EET+ GSFV ++A+DLGL EL+ R R++S + L+ +G+L+ ++DR
Sbjct: 33 YSVSEETDKGSFVGDIAKDLGLEPRELAERGVRIISRGRTQLFALNQRSGSLVTAGRIDR 92
Query: 93 DELCGSTEPCVLHFQVVLENPLQFFRFELCVKDINDHSPTFLDKEILIKISEGTTVGATF 152
+E+C + C+++F +++E+ + + ++ + DIND+ P FL +EI +KI E T G F
Sbjct: 93 EEICAQSARCLVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEEINVKIMENTAPGVRF 152
Query: 153 LMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAELRLTL 212
+ A D DVG+NSLQ+Y +SPN HF + + D YPELVL+R LD E+E L L
Sbjct: 153 PLSEAGDPDVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLERVLDREEERVHHLVL 212
Query: 213 TAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPEDRPLGSWIATISAKDLDAG 272
TA DGG PP+S T + + V+D+ND+ P F Y+V VPE+ P+G+ + T+ A DLD G
Sbjct: 213 TASDGGDPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEG 272
Query: 273 NYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQSYTINIQATDGGGLSGKCT 332
G+++Y+F + + K F +N ++GE++ LD+E Y + +QA DG G K
Sbjct: 273 VNGEVTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEMEVQAQDGPGSLTKAK 332
Query: 333 LLVKVMDINDNPPEVTISSITKRIPENAS-ETLVALFSILDQDSGDNGRMICSIQDNLPF 391
+L+ V+D+NDN PEVT++S++ IPE+ T++ALF + D+DSG NG + C+I +NLPF
Sbjct: 333 VLITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIPENLPF 392
Query: 392 FLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGTPRLKTEYNITVLLSDVNDNAPTF 451
L+ + N++ LV+ K LDRE+ + YNIT+ TD GTP L E +I + ++D NDN PTF
Sbjct: 393 KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPPTF 452
Query: 452 TQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLLPPQDRHLPLASLVSINADNG 511
+SY++++ ENN I V+A D DS NAQ+ YSL + P++S VSIN+D G
Sbjct: 453 PHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQGAPVSSYVSINSDTG 512
Query: 512 HLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYP-LQNGSA 570
L+AL+S DYE L+E + RV A D G P LSS + + VLD NDN P +LYP L +
Sbjct: 513 VLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQNDNPPEILYPALPTDGS 572
Query: 571 PCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTARLL 630
EL PR+AEPGYLVTKVVAVD DSGQNAWLSY LLKA+EPGLF V + GEVRTAR L
Sbjct: 573 TGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLFAVGLYTGEVRTARAL 632
Query: 631 SERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYLPLPEAAPAQAQAD-SLTVY 689
+RDA K LVV V+D+G+PP SAT TL V + D + L P+ + LT+Y
Sbjct: 633 LDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLEPSDGPYNYDLTLY 692
Query: 690 LVVALASVSSLFLFSVLLFVAVRLCR--RSR---AASVGRCSVPEGPFPGHLVDVSGTGT 744
LVVA+A+VS +FL VL+ +A+RL R +SR A+ G +VP H V + G
Sbjct: 693 LVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVP----TSHFVGMDGVQA 748
Query: 745 LSQSYQYEVCLTGGSGTNEFKFLKP 769
Q+Y +EV LT S + F +P
Sbjct: 749 FLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|14196471 protocadherin gamma subfamily A, 5 isoform 2 precursor
[Homo sapiens]
Length = 813
Score = 617 bits (1591), Expect = e-176
Identities = 342/761 (44%), Positives = 482/761 (63%), Gaps = 6/761 (0%)
Query: 14 VLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVSDDNKK 73
+L F++L L G+ YS+ EE + GSFV N+A+DLGL +EL+ R R+VS +
Sbjct: 14 LLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRTQ 73
Query: 74 YLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDINDHSPTF 133
L+ +G+L+ ++DR+ELC + CV++F +++EN ++ + E+ + DIND+ P F
Sbjct: 74 LFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPRF 133
Query: 134 LDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDRKIYPE 193
D+E+ +K++E G ++ A+D DVG NSL++Y +S N HF + + +D + YPE
Sbjct: 134 RDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPE 193
Query: 194 LVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPE 253
LVL++ LD E+E L LTA+DGG P SGTT + + VLD NDNAP F S Y V VPE
Sbjct: 194 LVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPE 253
Query: 254 DRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQ 313
+ P+G+ + ++A D D G GK++Y+F + E I +TF+++ GE++ LD+E +
Sbjct: 254 NIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEESR 313
Query: 314 SYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA-SETLVALFSILD 372
Y + + A DGG L ++V V D+NDN PEV ++S+T I E+ T++ALFS+ D
Sbjct: 314 FYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHD 373
Query: 373 QDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGTPRLK 432
DSG+NG + CSI NLPF L+ + N++ L++ + LDRE ++YNIT+TV D GTP L
Sbjct: 374 GDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPLS 433
Query: 433 TEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLLP 492
TE +I + ++DVNDN P F Q SY+ V ENN + I SV+A D DSG NA+V YSL
Sbjct: 434 TESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAE 493
Query: 493 PQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVRVLVL 552
+ PL+S VSIN+D G L+ALRS DYE L++ + V A+D G+P LSS + + VL
Sbjct: 494 DTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVL 553
Query: 553 DANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
D NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E
Sbjct: 554 DQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASE 613
Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 671
PGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT T+ V + D
Sbjct: 614 PGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDILA 673
Query: 672 PLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGRCSVP 728
L P + LT+YLVVA+A+VS +FL V++ + +RL R +SR +
Sbjct: 674 DLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRLA 733
Query: 729 EGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 769
P H V V G Q+Y +EV LT S + F +P
Sbjct: 734 GVP-ASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
>gi|11056024 protocadherin gamma subfamily A, 5 isoform 1 precursor
[Homo sapiens]
Length = 931
Score = 617 bits (1591), Expect = e-176
Identities = 342/761 (44%), Positives = 482/761 (63%), Gaps = 6/761 (0%)
Query: 14 VLIFLVLLGLSRAGTESAHYSVAEETEIGSFVANLARDLGLGVEELSSREARVVSDDNKK 73
+L F++L L G+ YS+ EE + GSFV N+A+DLGL +EL+ R R+VS +
Sbjct: 14 LLPFMLLGTLCEPGSGQIRYSMPEELDKGSFVGNIAKDLGLEPQELAERGVRIVSRGRTQ 73
Query: 74 YLHLDLLTGNLLLNEKLDRDELCGSTEPCVLHFQVVLENPLQFFRFELCVKDINDHSPTF 133
L+ +G+L+ ++DR+ELC + CV++F +++EN ++ + E+ + DIND+ P F
Sbjct: 74 LFALNPRSGSLVTAGRIDREELCAQSPLCVVNFNILVENKMKIYGVEVEIIDINDNFPRF 133
Query: 134 LDKEILIKISEGTTVGATFLMESAQDLDVGSNSLQNYTISPNSHFYIKIPDSSDRKIYPE 193
D+E+ +K++E G ++ A+D DVG NSL++Y +S N HF + + +D + YPE
Sbjct: 134 RDEELKVKVNENAAAGTRLVLPFARDADVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPE 193
Query: 194 LVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPE 253
LVL++ LD E+E L LTA+DGG P SGTT + + VLD NDNAP F S Y V VPE
Sbjct: 194 LVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPE 253
Query: 254 DRPLGSWIATISAKDLDAGNYGKISYTFFHASEDIRKTFEINPISGEVNLRSPLDFEVIQ 313
+ P+G+ + ++A D D G GK++Y+F + E I +TF+++ GE++ LD+E +
Sbjct: 254 NIPVGTRLLMLTATDPDEGINGKLTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEESR 313
Query: 314 SYTINIQATDGGGLSGKCTLLVKVMDINDNPPEVTISSITKRIPENA-SETLVALFSILD 372
Y + + A DGG L ++V V D+NDN PEV ++S+T I E+ T++ALFS+ D
Sbjct: 314 FYLMEVVAQDGGALVASAKVVVTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHD 373
Query: 373 QDSGDNGRMICSIQDNLPFFLKPTFKNFFTLVSEKALDRESQAEYNITITVTDLGTPRLK 432
DSG+NG + CSI NLPF L+ + N++ L++ + LDRE ++YNIT+TV D GTP L
Sbjct: 374 GDSGENGEIACSIPRNLPFKLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPLS 433
Query: 433 TEYNITVLLSDVNDNAPTFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVNYSLLP 492
TE +I + ++DVNDN P F Q SY+ V ENN + I SV+A D DSG NA+V YSL
Sbjct: 434 TESHIPLKVADVNDNPPNFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAE 493
Query: 493 PQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEALVRVLVL 552
+ PL+S VSIN+D G L+ALRS DYE L++ + V A+D G+P LSS + + VL
Sbjct: 494 DTFQGAPLSSYVSINSDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVL 553
Query: 553 DANDNSPFVLYP-LQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATE 611
D NDN+P +LYP L + EL PR+AEPGYLVTKVVAVD DSGQNAWLSY+LLKA+E
Sbjct: 554 DQNDNTPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASE 613
Query: 612 PGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVDGFSQPYL 671
PGLF V H GEVRTAR L +RDA K LVV V+D+G+PP SAT T+ V + D
Sbjct: 614 PGLFAVGLHTGEVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDILA 673
Query: 672 PLPE-AAPAQAQADSLTVYLVVALASVSSLFLFSVLLFVAVRLCR--RSRAASVGRCSVP 728
L P + LT+YLVVA+A+VS +FL V++ + +RL R +SR +
Sbjct: 674 DLGSIKTPIDPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRLA 733
Query: 729 EGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGTNEFKFLKP 769
P H V V G Q+Y +EV LT S + F +P
Sbjct: 734 GVP-ASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQP 773
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,750,504
Number of Sequences: 37866
Number of extensions: 1360472
Number of successful extensions: 9869
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 2790
Number of HSP's gapped (non-prelim): 642
length of query: 798
length of database: 18,247,518
effective HSP length: 110
effective length of query: 688
effective length of database: 14,082,258
effective search space: 9688593504
effective search space used: 9688593504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.