Guide to the Human Genome
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Name: C8orf74 Sequence: fasta or formatted (294aa) NCBI GI: 91176323
Description:

hypothetical protein LOC203076

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         26           4
 C cysteine            1.4          4           1
 D aspartate           3.7         11           1
 E glutamate           8.8         26           2
 F phenylalanine       3.7         11           1
 G glycine             4.1         12           1
 H histidine           3.4         10           2
 I isoleucine          4.1         12           2
 K lysine              6.1         18           2
 L leucine            14.3         42           3
 M methionine          1.4          4           1
 N asparagine          2.4          7           1
 P proline             5.1         15           3
 Q glutamine           8.8         26           2
 R arginine            6.8         20           2
 S serine              2.7          8           1
 T threonine           5.8         17           2
 V valine              5.4         16           2
 W tryptophan          1.0          3           1
 Y tyrosine            2.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC203076 
C16orf93              0.048   hypothetical protein LOC90835 
CCDC57                0.021   coiled-coil domain containing 57 
C10orf107             0.020   hypothetical protein LOC219621 
ProSAPiP1             0.020   ProSAPiP1 protein 
ACIN1                 0.018   apoptotic chromatin condensation inducer 1 
MAP7D1                0.014   MAP7 domain containing 1 
ENAH                  0.012   enabled homolog isoform a 
ENAH                  0.012   enabled homolog isoform b 
MYO10                 0.012   myosin X 
CAPRIN1               0.012   membrane component chromosome 11 surface marker 1 is...
CAPRIN1               0.012   membrane component chromosome 11 surface marker 1 is...
MKL1                  0.011   megakaryoblastic leukemia 1 protein 
ZNF853                0.011   zinc finger protein 853 
RDX                   0.009   radixin 
SFRS17A               0.009   DNA segment on chromosome X and Y (unique) 155 expre...
KIF21B                0.009   kinesin family member 21B 
RRBP1                 0.009   ribosome binding protein 1 
RRBP1                 0.009   ribosome binding protein 1 
ROCK2                 0.009   Rho-associated, coiled-coil containing protein kinas...
ZFHX2                 0.009   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.009   PREDICTED: zinc finger homeobox 2 
ZFHX2                 0.009   PREDICTED: zinc finger homeobox 2 
PMFBP1                0.009   polyamine modulated factor 1 binding protein 1 isof...
PMFBP1                0.009   polyamine modulated factor 1 binding protein 1 isof...
CCDC11                0.009   coiled-coil domain containing 11 
MAF                   0.009   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.009   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
MNAT1                 0.009   menage a trois 1 (CAK assembly factor) 
KIAA0774              0.007   hypothetical protein LOC23281 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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