Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 91105174
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|91105174 CD19 antigen [Homo sapiens]
(556 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|91105174 CD19 antigen [Homo sapiens] 1171 0.0
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 47 4e-05
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 46 1e-04
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 43 7e-04
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 43 7e-04
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 42 0.001
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 42 0.001
gi|209862789 microtubule associated monoxygenase, calponin and L... 42 0.002
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens] 41 0.003
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 41 0.003
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 40 0.006
gi|121949802 cancer/testis antigen family 47, member A1 [Homo sa... 40 0.007
gi|121949798 cancer/testis antigen family 47, member A2 [Homo sa... 40 0.007
gi|121949773 cancer/testis antigen family 47, member A3 [Homo sa... 40 0.007
gi|121949771 cancer/testis antigen family 47, member A4 [Homo sa... 40 0.007
gi|121949796 cancer/testis antigen family 47, member A5 [Homo sa... 40 0.007
gi|121949794 cancer/testis antigen family 47, member A6 [Homo sa... 40 0.007
gi|121949792 cancer/testis antigen family 47, member A7 [Homo sa... 40 0.007
gi|121949790 cancer/testis antigen family 47, member A8 [Homo sa... 40 0.007
gi|121949788 cancer/testis antigen family 47, member A9 [Homo sa... 40 0.007
gi|121949786 cancer/testis antigen family 47, member A10 [Homo s... 40 0.007
gi|122114660 cancer/testis antigen family 47, member A11 [Homo s... 40 0.007
gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens] 39 0.010
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 39 0.010
gi|49087132 sal-like 2 [Homo sapiens] 39 0.010
gi|4504487 histidine rich calcium binding protein precursor [Hom... 39 0.010
gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo sa... 39 0.013
gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo sap... 39 0.013
gi|4505913 PMS2 postmeiotic segregation increased 2 isoform a [H... 38 0.021
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 38 0.021
>gi|91105174 CD19 antigen [Homo sapiens]
Length = 556
Score = 1171 bits (3030), Expect = 0.0
Identities = 556/556 (100%), Positives = 556/556 (100%)
Query: 1 MPPPRLLFFLLFLTPMEVRPEEPLVVKVEEGDNAVLQCLKGTSDGPTQQLTWSRESPLKP 60
MPPPRLLFFLLFLTPMEVRPEEPLVVKVEEGDNAVLQCLKGTSDGPTQQLTWSRESPLKP
Sbjct: 1 MPPPRLLFFLLFLTPMEVRPEEPLVVKVEEGDNAVLQCLKGTSDGPTQQLTWSRESPLKP 60
Query: 61 FLKLSLGLPGLGIHMRPLAIWLFIFNVSQQMGGFYLCQPGPPSEKAWQPGWTVNVEGSGE 120
FLKLSLGLPGLGIHMRPLAIWLFIFNVSQQMGGFYLCQPGPPSEKAWQPGWTVNVEGSGE
Sbjct: 61 FLKLSLGLPGLGIHMRPLAIWLFIFNVSQQMGGFYLCQPGPPSEKAWQPGWTVNVEGSGE 120
Query: 121 LFRWNVSDLGGLGCGLKNRSSEGPSSPSGKLMSPKLYVWAKDRPEIWEGEPPCLPPRDSL 180
LFRWNVSDLGGLGCGLKNRSSEGPSSPSGKLMSPKLYVWAKDRPEIWEGEPPCLPPRDSL
Sbjct: 121 LFRWNVSDLGGLGCGLKNRSSEGPSSPSGKLMSPKLYVWAKDRPEIWEGEPPCLPPRDSL 180
Query: 181 NQSLSQDLTMAPGSTLWLSCGVPPDSVSRGPLSWTHVHPKGPKSLLSLELKDDRPARDMW 240
NQSLSQDLTMAPGSTLWLSCGVPPDSVSRGPLSWTHVHPKGPKSLLSLELKDDRPARDMW
Sbjct: 181 NQSLSQDLTMAPGSTLWLSCGVPPDSVSRGPLSWTHVHPKGPKSLLSLELKDDRPARDMW 240
Query: 241 VMETGLLLPRATAQDAGKYYCHRGNLTMSFHLEITARPVLWHWLLRTGGWKVSAVTLAYL 300
VMETGLLLPRATAQDAGKYYCHRGNLTMSFHLEITARPVLWHWLLRTGGWKVSAVTLAYL
Sbjct: 241 VMETGLLLPRATAQDAGKYYCHRGNLTMSFHLEITARPVLWHWLLRTGGWKVSAVTLAYL 300
Query: 301 IFCLCSLVGILHLQRALVLRRKRKRMTDPTRRFFKVTPPPGSGPQNQYGNVLSLPTPTSG 360
IFCLCSLVGILHLQRALVLRRKRKRMTDPTRRFFKVTPPPGSGPQNQYGNVLSLPTPTSG
Sbjct: 301 IFCLCSLVGILHLQRALVLRRKRKRMTDPTRRFFKVTPPPGSGPQNQYGNVLSLPTPTSG 360
Query: 361 LGRAQRWAAGLGGTAPSYGNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEF 420
LGRAQRWAAGLGGTAPSYGNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEF
Sbjct: 361 LGRAQRWAAGLGGTAPSYGNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEF 420
Query: 421 YENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESYENEDEELTQPVARTMDFLS 480
YENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESYENEDEELTQPVARTMDFLS
Sbjct: 421 YENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESYENEDEELTQPVARTMDFLS 480
Query: 481 PHGSAWDPSREATSLGSQSYEDMRGILYAAPQLRSIRGQPGPNHEEDADSYENMDNPDGP 540
PHGSAWDPSREATSLGSQSYEDMRGILYAAPQLRSIRGQPGPNHEEDADSYENMDNPDGP
Sbjct: 481 PHGSAWDPSREATSLGSQSYEDMRGILYAAPQLRSIRGQPGPNHEEDADSYENMDNPDGP 540
Query: 541 DPAWGGGGRMGTWSTR 556
DPAWGGGGRMGTWSTR
Sbjct: 541 DPAWGGGGRMGTWSTR 556
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 47.4 bits (111), Expect = 4e-05
Identities = 42/159 (26%), Positives = 60/159 (37%), Gaps = 10/159 (6%)
Query: 305 CSLVGILHLQRALVLRRKRKRMTDPTRRFFKVTPPPGSGPQNQYGNVLSLPTPTSGLGRA 364
C+ G H + KR + R P GP LSL L
Sbjct: 1573 CTFPGCRHTVVGMSQMDSHKRKHEKQERGEPAAEGPAPGPPISLDGSLSLGAEPGSLLFL 1632
Query: 365 QRWAAGLGGTAPSYGNPSSDVQA-----DGALGSRSPPGVGPEEEEGEGYEEPDSEEDSE 419
Q AAGLG G+P A +GA + + G +E+E E E P+ E + +
Sbjct: 1633 QSAAAGLGLALGDAGDPGPPDAAAPGPREGAAAAAAAAGESSQEDEEEELELPEEEAEDD 1692
Query: 420 FYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNA 458
E+D D+ D E+ +DE L + E+S A
Sbjct: 1693 EDEDD-----DEDDDDEDDDEDDDDEDLRTDSEESLPEA 1726
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 45.8 bits (107), Expect = 1e-04
Identities = 55/206 (26%), Positives = 82/206 (39%), Gaps = 24/206 (11%)
Query: 343 GPQNQYGNVLSLPTPTSGLGRAQRWAAGLGGTAPSYGNPSSDVQADGALGSRSPPGVGPE 402
G Q G +S T G G L G A + G+ Q+DGA G +P G
Sbjct: 1788 GEAEQEGEGISERGETGGQGSGHE--DNLQGEAAAGGDQDPG-QSDGAEGIEAPEAEGEA 1844
Query: 403 EEEGEGYEEPDSEEDSEFYENDSN-LGQDQLSQDGSGYENPEDEPL-GPEDE----DSFS 456
+ E EG E P++E D++ E ++ +D + + G PE E + PE E
Sbjct: 1845 QPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESE 1904
Query: 457 NAESYENEDEELTQPVARTMDFLSPHGSAWDPSREATSLGSQSYEDMRGILYAAPQLRSI 516
AE+ E E E QP +++ L G E S G+++ E A +
Sbjct: 1905 GAEAPEAEKE--AQPETESVEALETEG-----EDEPESEGAEAQE-------AEEAAQEA 1950
Query: 517 RGQPGPNHEE-DADSYENMDNPDGPD 541
GQ P E ++ E P+ D
Sbjct: 1951 EGQTQPESEVIESQEAEEEAQPESED 1976
Score = 35.0 bits (79), Expect = 0.18
Identities = 45/190 (23%), Positives = 72/190 (37%), Gaps = 26/190 (13%)
Query: 364 AQRWAAGLGGTAPSYGNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEFYEN 423
AQ + G+ S G + +V+ + + G + E +G E P++EE+++ E
Sbjct: 2016 AQPESDGVEAQPKSEGEEAQEVEGE------TQKTEGDAQPESDGVEAPEAEEEAQEAEG 2069
Query: 424 DSN--------LGQDQLSQDGSGYENPEDEPL-GPEDEDSFSNAESYE-NEDEELTQPVA 473
+ +D +Q+ G PE E + PE E AE E E E QP +
Sbjct: 2070 EVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPES 2129
Query: 474 RTMDFLSPHGSAWDPSREATSLGSQSYEDMRGILYAAPQLRSIRGQPGPNHEEDADSYEN 533
++ G A P E +D G A P+ I Q EE E
Sbjct: 2130 EGIEAPEAEGEA-QPESEGVEA-----QDAEG--EAQPESEGIEAQEA--EEEAQPELEG 2179
Query: 534 MDNPDGPDPA 543
++ P+ A
Sbjct: 2180 VEAPEAEGEA 2189
Score = 34.7 bits (78), Expect = 0.24
Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 24/152 (15%)
Query: 381 PSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYE 440
P ++ +A A G +P G + E EG E P++E +++ + G + +QD G
Sbjct: 2104 PEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQ----PESEGVE--AQDAEGEA 2157
Query: 441 NPEDEPLGPEDEDSFSNAESYENEDEELTQPVARTMDFLSPHGSAWDPSR--EATSLGSQ 498
PE E + + E EE QP ++ G A S EA +
Sbjct: 2158 QPESEGIEAQ-------------EAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGE 2204
Query: 499 SYEDMRGILYAAPQLRSIRGQPGPNHEEDADS 530
+ ++ G+ AP+ QP P E ++
Sbjct: 2205 AQPELEGV--EAPEAEE-EAQPEPEGVETPEA 2233
Score = 33.5 bits (75), Expect = 0.53
Identities = 40/170 (23%), Positives = 63/170 (37%), Gaps = 14/170 (8%)
Query: 377 SYGNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEFY--ENDSNLGQ---DQ 431
++ +P+S GA G G+GP +G G +E + E S+ + D LG+ D
Sbjct: 1713 THTDPTSTRTVQGAEG-----GLGPGLSQGPGVDEGEDGEGSQRLNRDKDPKLGEAEGDA 1767
Query: 432 LSQDGSGYENPEDEPLGPEDEDSFSNAESYENEDEELTQPVARTMDFLSPHGSAWDPSRE 491
++Q+ G + + G E ++ E E Q D L +A
Sbjct: 1768 MAQEREGKTHNSETSAGSELGEAEQEGEGISERGETGGQGSGHE-DNLQGEAAAGGDQDP 1826
Query: 492 ATSLGSQSYEDMRGILYAAPQLRSIRGQPGPNHEEDADSYENMDNPDGPD 541
S G++ E A P+ G P E DA E P+ D
Sbjct: 1827 GQSDGAEGIEAPEAEGEAQPE---SEGVEAPEAEGDAQEAEGEAQPESED 1873
Score = 33.1 bits (74), Expect = 0.69
Identities = 36/154 (23%), Positives = 53/154 (34%), Gaps = 16/154 (10%)
Query: 382 SSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSE---------EDSEFYENDSNLGQDQL 432
S DV+ A P G E E E +P++E ED E ++
Sbjct: 1887 SEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEA 1946
Query: 433 SQDGSGYENPEDEPLGPEDEDSFSNAESYENEDEELTQPVARTMDFLSPHGSAWDPSREA 492
+Q+ G PE E + ++ + + ES ED E + T + G A P E
Sbjct: 1947 AQEAEGQTQPESEVIESQEAEEEAQPES---EDVEALEVEVETQE---AEGEA-QPESED 1999
Query: 493 TSLGSQSYEDMRGILYAAPQLRSIRGQPGPNHEE 526
E A P+ + QP EE
Sbjct: 2000 VEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEE 2033
Score = 29.6 bits (65), Expect = 7.6
Identities = 35/117 (29%), Positives = 40/117 (34%), Gaps = 16/117 (13%)
Query: 340 PGSGPQ---NQYGNVLSLPTPTSGLGRAQRWAAGLGG-------TAPSYGNPSSDVQADG 389
PG PQ Q G S P P SG R + G G T S G P +A G
Sbjct: 884 PGGSPQEGTRQPGPTPS-PGPNSGASRRSSASQGAGSRGLSEEKTLRSGGGPQGQEEASG 942
Query: 390 ALGSRSPPGVGPEEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEP 446
S S P PE E + E YE L + G G PE +P
Sbjct: 943 VSPS-SLPRSSPEAVVREWLDNIPEEPILMTYE----LADETTGAAGGGLRGPEVDP 994
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 43.1 bits (100), Expect = 7e-04
Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 20/170 (11%)
Query: 379 GNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSG 438
G+P S A G PP EEEE E EE ++E + N + G G G
Sbjct: 23 GSPGS-----AARGRAEPPEEEEEEEEEE--EEAEAEAVAALLLNGGSGGGG--GGGGGG 73
Query: 439 YENPEDEPLGPEDEDSFSNAESYENEDEELTQPVARTMDFLSPHGSAWDPSREATSLGSQ 498
E E + +S S A E+E+E+ + D S G + S + +GS
Sbjct: 74 VGGGEAETMSEPSPESASQAGEDEDEEEDDEEEE----DESSSSGGGEEESSAESLVGSS 129
Query: 499 SYEDMRGILYAAPQLRSIRGQPGPNHEEDADSYENMDNPDGPDPAWGGGG 548
++ + RS+ + D D E ++ P GP + GGGG
Sbjct: 130 GGS-------SSDETRSLSPGAASSSSGDGDGKEGLEEPKGPRGSQGGGG 172
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 43.1 bits (100), Expect = 7e-04
Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 20/170 (11%)
Query: 379 GNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSG 438
G+P S A G PP EEEE E EE ++E + N + G G G
Sbjct: 23 GSPGS-----AARGRAEPPEEEEEEEEEE--EEAEAEAVAALLLNGGSGGGG--GGGGGG 73
Query: 439 YENPEDEPLGPEDEDSFSNAESYENEDEELTQPVARTMDFLSPHGSAWDPSREATSLGSQ 498
E E + +S S A E+E+E+ + D S G + S + +GS
Sbjct: 74 VGGGEAETMSEPSPESASQAGEDEDEEEDDEEEE----DESSSSGGGEEESSAESLVGSS 129
Query: 499 SYEDMRGILYAAPQLRSIRGQPGPNHEEDADSYENMDNPDGPDPAWGGGG 548
++ + RS+ + D D E ++ P GP + GGGG
Sbjct: 130 GGS-------SSDETRSLSPGAASSSSGDGDGKEGLEEPKGPRGSQGGGG 172
>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
isoform a [Homo sapiens]
Length = 856
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 18/162 (11%)
Query: 379 GNPSSDVQADGA-----LGSRSPPGVGPEEEEGEGYEEPDSEEDSEFYENDSNLGQDQL- 432
G+ + +V+ +G PPG+ P E G GY PD + + Q+
Sbjct: 58 GHINEEVETEGGSELEGTAQPPPPGLQPHAEPG-GYSGPDGHYAMDNITRQNQFYDTQVI 116
Query: 433 -SQDGSGYENPEDEPLGPEDEDSFSNAESYENEDEELTQPVARTMDFLSPHGSAWDPSRE 491
++ SGYE PL E + ++ E + T FL P S P R+
Sbjct: 117 KQENESGYER---RPLEMEQQQAYRPEMKTEMKQGAPTS-------FLPPEASQLKPDRQ 166
Query: 492 ATSLGSQSYEDMRGILYAAPQLRSIRGQPGPNHEEDADSYEN 533
+ YE+ RG Y + P P EED D +++
Sbjct: 167 QFQSRKRPYEENRGRGYFEHREDRRGRSPQPPAEEDEDDFDD 208
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 42.4 bits (98), Expect = 0.001
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 397 PGVGPE------EEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPE 450
PG PE EEE E EE + EE+ E E + G + DG+ + E+ + E
Sbjct: 1339 PGEKPEDDLIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDGAKSQEKEEPEISTE 1398
Query: 451 DEDSFSNAESYENEDEELTQP 471
EDS + + +E E+EE +P
Sbjct: 1399 KEDS-ARLDDHEEEEEEDEEP 1418
Score = 34.7 bits (78), Expect = 0.24
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 8/148 (5%)
Query: 386 QADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDE 445
Q + + G SP + EEE E E +E++ E + +S + S E PED+
Sbjct: 1292 QKETSEGKTSPSPIRIEEEVKETGEALLPQEENRREETCA-----PVSPNTSPGEKPEDD 1346
Query: 446 PLGPEDEDSFSNAESYENEDEELTQPVARTMDFLSPHGSAWDPSREATSLGSQSYEDMRG 505
+ PE+E+ E E E+EE + P G A +E + ++ + R
Sbjct: 1347 LIKPEEEEEEEEEEEEEEEEEEGEEEEGGGNVEKDPDG-AKSQEKEEPEISTEKEDSAR- 1404
Query: 506 ILYAAPQLRSIRGQPGPNHEEDADSYEN 533
L + +P N + DAD ++
Sbjct: 1405 -LDDHEEEEEEDEEPSHNEDHDADDEDD 1431
Score = 32.3 bits (72), Expect = 1.2
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 29/98 (29%)
Query: 399 VGPEEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSF--- 455
+ PEEEE E EE + EE+ E E + G + DG+ + E+ + E EDS
Sbjct: 1348 IKPEEEEEEEEEEEEEEEEEEGEEEEGG-GNVEKDPDGAKSQEKEEPEISTEKEDSARLD 1406
Query: 456 -------------------------SNAESYENEDEEL 468
S+ ES E E EEL
Sbjct: 1407 DHEEEEEEDEEPSHNEDHDADDEDDSHMESAEVEKEEL 1444
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/126 (30%), Positives = 49/126 (38%), Gaps = 20/126 (15%)
Query: 357 PTSGLGRAQRWAAGLGGTAPSYGNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEE 416
P S LG W + A G +++A + G PG EEEE E YEE + E+
Sbjct: 954 PPSDLGGVP-WKEAVRIHALLKGKSEEELEASKSFG----PGNEEEEEEEEEYEEEEEED 1008
Query: 417 DSEFYENDSNLGQDQLSQDGSG---------------YENPEDEPLGPEDEDSFSNAESY 461
E E S G +L Q E E+E + P E S S A
Sbjct: 1009 YDEEEEESSEAGNQRLQQVMHAADPLEIQADVHWTHIREREEEERMAPASESSASGAPLD 1068
Query: 462 ENEDEE 467
EN+ EE
Sbjct: 1069 ENDLEE 1074
>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
Length = 1712
Score = 41.2 bits (95), Expect = 0.003
Identities = 57/226 (25%), Positives = 76/226 (33%), Gaps = 45/226 (19%)
Query: 337 TPPPG-SGPQNQYGNVLSLPTPTSGLGRAQRWAAGLGGTAPSYGNPSSDVQAD--GALGS 393
T PPG GP+ Q G +LP R + GL G G P Q GA G
Sbjct: 156 TGPPGPQGPKGQKGEPYALPKEERDRYRGEPGEPGLVGFQGPPGRPGHVGQMGPVGAPGR 215
Query: 394 RSPPGV-GPEEEEGE---GYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGP 449
PPG GP+ ++G G+ E+ + + D L +P P G
Sbjct: 216 PGPPGPPGPKGQQGNRGLGFYGVKGEKGDVGQPGPNGIPSDTL--------HPIIAPTGV 267
Query: 450 EDEDSFSNAESYENEDEELTQPVARTMDFLSPHGSAWDPSREATSL----GSQSYEDMRG 505
+ + Y+ E GS +P SL G + +RG
Sbjct: 268 T-----FHPDQYKGEK-----------------GSEGEPGIRGISLKGEEGIMGFPGLRG 305
Query: 506 ILYAAPQLRSIRGQPGPNHEEDADSYENMDNPDGPDPAWGGGGRMG 551
P L +G PG D Y+ D P GP G G G
Sbjct: 306 Y----PGLSGEKGSPGQKGSRGLDGYQGPDGPRGPKGEAGDPGPPG 347
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 16/88 (18%)
Query: 381 PSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSE-EDSEFYENDSNLGQDQLSQDGSGY 439
P SD + DG V EEE+ EG +E D + ED E E D +D+
Sbjct: 156 PDSDAEVDG---------VDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDE------DV 200
Query: 440 ENPEDEPLGPEDEDSFSNAESYENEDEE 467
E ED+ E+E+ F E E+EDE+
Sbjct: 201 EGDEDDDEVSEEEEEFGLDEEDEDEDED 228
Score = 29.6 bits (65), Expect = 7.6
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Query: 407 EGYEEPDS--EEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESYENE 464
E E PDS E D E + G+D+ +D E E + EDED + + E
Sbjct: 151 EDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVS 210
Query: 465 DEE 467
+EE
Sbjct: 211 EEE 213
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 40.0 bits (92), Expect = 0.006
Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 8/141 (5%)
Query: 402 EEEEGEGYEEPDSE---EDSEFYENDSNLGQDQLSQDGSGYENPED-EPLGPEDEDSFSN 457
EE+EGE Y E + E ED E E D ++ +D E+ ED E E+E+
Sbjct: 103 EEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEE 162
Query: 458 AESYENEDEELTQPVARTMDFLSPHGSAWDPSREATSLGSQSYEDMRGI----LYAAPQL 513
E ENED ++ R M + D L ++S ++ I Y A
Sbjct: 163 EEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDELVAKSLLNLGKIAEDAAYRARTE 222
Query: 514 RSIRGQPGPNHEEDADSYENM 534
+ + E+D+D EN+
Sbjct: 223 SEMNSNTSNSLEDDSDKNENL 243
Score = 39.3 bits (90), Expect = 0.010
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 402 EEEEGEGYEEPDS--EEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAE 459
E ++ +G E+ D E++ E Y D++ D+ +D G + E+E + EDED + E
Sbjct: 89 ECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEG-DREEEEEIEEEDEDDDEDGE 147
Query: 460 SYENEDEE 467
E+E+EE
Sbjct: 148 DVEDEEEE 155
Score = 30.4 bits (67), Expect = 4.4
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 398 GVGPEEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDE 445
G E+EE E EE + EE+ E ++ N ++ QD +N DE
Sbjct: 146 GEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDE 193
>gi|121949802 cancer/testis antigen family 47, member A1 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 331 RRFFKVTPPPGSGPQNQYGNVLSLPTPTS-GLGRAQRWAAGLGGTAPSYGNPSSDVQADG 389
R+ ++ P + +N +GN+ L P G G A R GLG + P V AD
Sbjct: 145 RQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADL 204
Query: 390 ALGSRSPPGVGPEEE-EGEGYEEPDSEEDS------------EFYENDSNLGQDQLSQDG 436
A +R P EE+ E EEPD+EE + E D+ +QD
Sbjct: 205 AEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDA 264
Query: 437 SGYENPEDE 445
+G E E E
Sbjct: 265 AGEEEKEQE 273
>gi|121949798 cancer/testis antigen family 47, member A2 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 331 RRFFKVTPPPGSGPQNQYGNVLSLPTPTS-GLGRAQRWAAGLGGTAPSYGNPSSDVQADG 389
R+ ++ P + +N +GN+ L P G G A R GLG + P V AD
Sbjct: 145 RQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADL 204
Query: 390 ALGSRSPPGVGPEEE-EGEGYEEPDSEEDS------------EFYENDSNLGQDQLSQDG 436
A +R P EE+ E EEPD+EE + E D+ +QD
Sbjct: 205 AEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDA 264
Query: 437 SGYENPEDE 445
+G E E E
Sbjct: 265 AGEEEKEQE 273
>gi|121949773 cancer/testis antigen family 47, member A3 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 331 RRFFKVTPPPGSGPQNQYGNVLSLPTPTS-GLGRAQRWAAGLGGTAPSYGNPSSDVQADG 389
R+ ++ P + +N +GN+ L P G G A R GLG + P V AD
Sbjct: 145 RQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADL 204
Query: 390 ALGSRSPPGVGPEEE-EGEGYEEPDSEEDS------------EFYENDSNLGQDQLSQDG 436
A +R P EE+ E EEPD+EE + E D+ +QD
Sbjct: 205 AEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDA 264
Query: 437 SGYENPEDE 445
+G E E E
Sbjct: 265 AGEEEKEQE 273
>gi|121949771 cancer/testis antigen family 47, member A4 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 331 RRFFKVTPPPGSGPQNQYGNVLSLPTPTS-GLGRAQRWAAGLGGTAPSYGNPSSDVQADG 389
R+ ++ P + +N +GN+ L P G G A R GLG + P V AD
Sbjct: 145 RQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADL 204
Query: 390 ALGSRSPPGVGPEEE-EGEGYEEPDSEEDS------------EFYENDSNLGQDQLSQDG 436
A +R P EE+ E EEPD+EE + E D+ +QD
Sbjct: 205 AEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDA 264
Query: 437 SGYENPEDE 445
+G E E E
Sbjct: 265 AGEEEKEQE 273
>gi|121949796 cancer/testis antigen family 47, member A5 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 331 RRFFKVTPPPGSGPQNQYGNVLSLPTPTS-GLGRAQRWAAGLGGTAPSYGNPSSDVQADG 389
R+ ++ P + +N +GN+ L P G G A R GLG + P V AD
Sbjct: 145 RQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADL 204
Query: 390 ALGSRSPPGVGPEEE-EGEGYEEPDSEEDS------------EFYENDSNLGQDQLSQDG 436
A +R P EE+ E EEPD+EE + E D+ +QD
Sbjct: 205 AEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDA 264
Query: 437 SGYENPEDE 445
+G E E E
Sbjct: 265 AGEEEKEQE 273
>gi|121949794 cancer/testis antigen family 47, member A6 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 331 RRFFKVTPPPGSGPQNQYGNVLSLPTPTS-GLGRAQRWAAGLGGTAPSYGNPSSDVQADG 389
R+ ++ P + +N +GN+ L P G G A R GLG + P V AD
Sbjct: 145 RQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADL 204
Query: 390 ALGSRSPPGVGPEEE-EGEGYEEPDSEEDS------------EFYENDSNLGQDQLSQDG 436
A +R P EE+ E EEPD+EE + E D+ +QD
Sbjct: 205 AEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDA 264
Query: 437 SGYENPEDE 445
+G E E E
Sbjct: 265 AGEEEKEQE 273
>gi|121949792 cancer/testis antigen family 47, member A7 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 331 RRFFKVTPPPGSGPQNQYGNVLSLPTPTS-GLGRAQRWAAGLGGTAPSYGNPSSDVQADG 389
R+ ++ P + +N +GN+ L P G G A R GLG + P V AD
Sbjct: 145 RQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADL 204
Query: 390 ALGSRSPPGVGPEEE-EGEGYEEPDSEEDS------------EFYENDSNLGQDQLSQDG 436
A +R P EE+ E EEPD+EE + E D+ +QD
Sbjct: 205 AEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDA 264
Query: 437 SGYENPEDE 445
+G E E E
Sbjct: 265 AGEEEKEQE 273
>gi|121949790 cancer/testis antigen family 47, member A8 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 331 RRFFKVTPPPGSGPQNQYGNVLSLPTPTS-GLGRAQRWAAGLGGTAPSYGNPSSDVQADG 389
R+ ++ P + +N +GN+ L P G G A R GLG + P V AD
Sbjct: 145 RQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADL 204
Query: 390 ALGSRSPPGVGPEEE-EGEGYEEPDSEEDS------------EFYENDSNLGQDQLSQDG 436
A +R P EE+ E EEPD+EE + E D+ +QD
Sbjct: 205 AEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDA 264
Query: 437 SGYENPEDE 445
+G E E E
Sbjct: 265 AGEEEKEQE 273
>gi|121949788 cancer/testis antigen family 47, member A9 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 331 RRFFKVTPPPGSGPQNQYGNVLSLPTPTS-GLGRAQRWAAGLGGTAPSYGNPSSDVQADG 389
R+ ++ P + +N +GN+ L P G G A R GLG + P V AD
Sbjct: 145 RQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADL 204
Query: 390 ALGSRSPPGVGPEEE-EGEGYEEPDSEEDS------------EFYENDSNLGQDQLSQDG 436
A +R P EE+ E EEPD+EE + E D+ +QD
Sbjct: 205 AEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDA 264
Query: 437 SGYENPEDE 445
+G E E E
Sbjct: 265 AGEEEKEQE 273
>gi|121949786 cancer/testis antigen family 47, member A10 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 331 RRFFKVTPPPGSGPQNQYGNVLSLPTPTS-GLGRAQRWAAGLGGTAPSYGNPSSDVQADG 389
R+ ++ P + +N +GN+ L P G G A R GLG + P V AD
Sbjct: 145 RQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADL 204
Query: 390 ALGSRSPPGVGPEEE-EGEGYEEPDSEEDS------------EFYENDSNLGQDQLSQDG 436
A +R P EE+ E EEPD+EE + E D+ +QD
Sbjct: 205 AEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDA 264
Query: 437 SGYENPEDE 445
+G E E E
Sbjct: 265 AGEEEKEQE 273
>gi|122114660 cancer/testis antigen family 47, member A11 [Homo
sapiens]
Length = 288
Score = 39.7 bits (91), Expect = 0.007
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 14/129 (10%)
Query: 331 RRFFKVTPPPGSGPQNQYGNVLSLPTPTS-GLGRAQRWAAGLGGTAPSYGNPSSDVQADG 389
R+ ++ P + +N +GN+ L P G G A R GLG + P V AD
Sbjct: 145 RQLSRLMVGPHAAARNLWGNLPPLLLPQRLGAGAAARAGEGLGLIQEAASVPEPAVPADL 204
Query: 390 ALGSRSPPGVGPEEE-EGEGYEEPDSEEDS------------EFYENDSNLGQDQLSQDG 436
A +R P EE+ E EEPD+EE + E D+ +QD
Sbjct: 205 AEMAREPAEEAAEEKLSEEATEEPDAEEPATEEPTAQEATAPEEVTKSQPEKWDEEAQDA 264
Query: 437 SGYENPEDE 445
+G E E E
Sbjct: 265 AGEEEKEQE 273
>gi|94538343 sialic acid binding Ig-like lectin 8 [Homo sapiens]
Length = 499
Score = 39.3 bits (90), Expect = 0.010
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 30/132 (22%)
Query: 188 LTMAPGSTLWLSCGVPPDSVSRGPLSWTHVHPKGPKSLLSLELKDDRPARDMWVMETGLL 247
L++ G +L L C V + +R LSWT +G +L P+R GLL
Sbjct: 271 LSVLEGQSLRLVCAVNSNPPAR--LSWT----RGSLTLC--------PSRSS---NPGLL 313
Query: 248 -LPRATAQDAGKYYCHRGNLTMSFHLEI----------TARPVLWHWLLRTGGWKVSAVT 296
LPR +D G++ C N S H+ + T+RPV L GG A
Sbjct: 314 ELPRVHVRDEGEFTCRAQNAQGSQHISLSLSLQNEGTGTSRPVSQVTLAAVGG--AGATA 371
Query: 297 LAYLIFCLCSLV 308
LA+L FC+ ++
Sbjct: 372 LAFLSFCIIFII 383
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 39.3 bits (90), Expect = 0.010
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 402 EEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESY 461
EEEEGEG E + EE E + G+ + ++G G E E G E+E E
Sbjct: 850 EEEEGEGKGEEEGEEGEGEEEGEEGEGEGE-EEEGEGEGEEEGEGEGEEEEGEGEGEEEG 908
Query: 462 ENEDEE 467
E E EE
Sbjct: 909 EGEGEE 914
Score = 38.1 bits (87), Expect = 0.021
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 402 EEEEGEGYEEPDS--EEDSEFYENDSNLGQDQLSQDGSGYENPED-EPLGPEDEDSFSNA 458
EEEEGEG EE EE+ E E + ++ ++G G E E+ E G E+E
Sbjct: 829 EEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGE 888
Query: 459 ESYENEDEE 467
E E E EE
Sbjct: 889 EEGEGEGEE 897
Score = 38.1 bits (87), Expect = 0.021
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 6/100 (6%)
Query: 373 GTAPSYGNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEE-----DSEFYENDSNL 427
G G + + G G G EEEEGEG E + EE + E E +
Sbjct: 885 GEGEEEGEGEGEEEEGEGEGEEEGEGEG-EEEEGEGKGEEEGEEGEGEGEEEEGEGEGED 943
Query: 428 GQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESYENEDEE 467
G+ + ++ +E E+E G +E+ E E E EE
Sbjct: 944 GEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEE 983
Score = 38.1 bits (87), Expect = 0.021
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 392 GSRSPPGVGPEEEEGEGYEEPDSEE-DSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPE 450
G G G EEEEGE E + EE + E E + ++ ++G G EN + E
Sbjct: 1005 GEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEE 1064
Query: 451 DEDSFSNAESYENEDEE 467
+E + ENE ++
Sbjct: 1065 EEGKYQETGEEENERQD 1081
Score = 36.2 bits (82), Expect = 0.081
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 398 GVGPEEE-EGEGYE-EPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSF 455
G G EEE EGEG + E + EE+ +E + G+ + ++G G E E E G E+E
Sbjct: 930 GEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEG-EGEEGEGEGEEEE--- 985
Query: 456 SNAESYENEDEE 467
E E E EE
Sbjct: 986 GEGEGEEEEGEE 997
Score = 34.7 bits (78), Expect = 0.24
Identities = 27/71 (38%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 398 GVGPEEE-EGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGP-EDEDSF 455
G G EEE EGEG EE EE E G+ + +G G E E E G E E+
Sbjct: 979 GEGEEEEGEGEGEEEEGEEEGEEE-------GEGEEEGEGEGEEEEEGEVEGEVEGEEGE 1031
Query: 456 SNAESYENEDE 466
E E E+E
Sbjct: 1032 GEGEEEEGEEE 1042
Score = 34.3 bits (77), Expect = 0.31
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 386 QADGALGSRSPPGVGPEEE-EGEGYEEPD---SEEDSEFYENDSNLGQDQLSQ-DGSGYE 440
+ +G G G EEE EGEG EE + EE+ E + G+ + + +G G E
Sbjct: 864 EGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEE 923
Query: 441 NPEDEPLGPEDEDSFSNAESYENEDEE 467
E+ E+E+ E E E EE
Sbjct: 924 EGEEGEGEGEEEEGEGEGEDGEGEGEE 950
Score = 32.7 bits (73), Expect = 0.90
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Query: 398 GVGPEEEEGE-GYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFS 456
G G EEEGE G E + EE E + G+ + +G G E E E G E+ +
Sbjct: 854 GEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEG-EEEEGEGEGEEEGEGEG 912
Query: 457 NAESYENEDEE 467
E E + EE
Sbjct: 913 EEEEGEGKGEE 923
Score = 32.3 bits (72), Expect = 1.2
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 402 EEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESY 461
EEEEGEG E + E + E E + ++ +G G E E E G E+ + E
Sbjct: 958 EEEEGEGEGEEEGEGEGEEGEGEG----EEEEGEGEG-EEEEGEEEGEEEGEGEEEGEGE 1012
Query: 462 ENEDEE 467
E+EE
Sbjct: 1013 GEEEEE 1018
Score = 30.8 bits (68), Expect = 3.4
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 400 GPEEEEGEGYEEPDSEE---DSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFS 456
G E EEG+G E + EE + E E + G+ + ++G G E E E+E
Sbjct: 816 GGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGE-EEEGEGKGEEEGEEGEGEEEGEEG 874
Query: 457 NAESYENEDE 466
E E E E
Sbjct: 875 EGEGEEEEGE 884
Score = 30.0 bits (66), Expect = 5.8
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 402 EEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESY 461
E ++GEG EE E E G + ++G G E+E E+E+ E
Sbjct: 790 EGDQGEGEEEETEGRGEEKEEGGEVEGGEV--EEGKGEREEEEEEGEGEEEEGEGEEEEG 847
Query: 462 ENEDEE 467
E E+EE
Sbjct: 848 EGEEEE 853
Score = 29.6 bits (65), Expect = 7.6
Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 3/108 (2%)
Query: 361 LGRAQRWAAGLG-GTAPSYGNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSE 419
+G A+ G G GT + + Q + G G E GEG E + E E
Sbjct: 644 VGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEG--EKELAEKEE 701
Query: 420 FYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESYENEDEE 467
+ + D + + + G E ++ G E+E E + E+EE
Sbjct: 702 WKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEE 749
>gi|49087132 sal-like 2 [Homo sapiens]
Length = 1007
Score = 39.3 bits (90), Expect = 0.010
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 2/83 (2%)
Query: 372 GGTAPSYGNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEFYENDSNLGQDQ 431
GG A G+ S V G+ + PEEE E EE D EE+ + + DS G+
Sbjct: 729 GGAAQENGSEQSTVSGAGSFPQQQSQQPSPEEELSEEEEEEDEEEEEDVTDEDSLAGRGS 788
Query: 432 LS--QDGSGYENPEDEPLGPEDE 452
S + +E G E+E
Sbjct: 789 ESGGEKAISVRGDSEEASGAEEE 811
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 39.3 bits (90), Expect = 0.010
Identities = 41/144 (28%), Positives = 54/144 (37%), Gaps = 20/144 (13%)
Query: 368 AAGLGGTAPSYGNPSSDVQAD-GALGS-----RSPPG-----------VGPEEEEGEGYE 410
+A LG APS+ D + G GS PPG EEE E E
Sbjct: 431 SAELGHQAPSHRQSHQDEETGHGQRGSIKEMSHHPPGHTVVKDRSHLRKDDSEEEKEKEE 490
Query: 411 EPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDE---PLGPEDEDSFSNAESYENEDEE 467
+P S E+ + G S+D E+ E+ L E+E+ E E EDEE
Sbjct: 491 DPGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEEGHGLSLNQEEEEEEDKEEEEEEEDEE 550
Query: 468 LTQPVARTMDFLSPHGSAWDPSRE 491
+ A LSP S + E
Sbjct: 551 RREERAEVGAPLSPDHSEEEEEEE 574
Score = 35.8 bits (81), Expect = 0.11
Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 402 EEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFS 456
EEEE E EE + EED E E + +G LS D S E E+E L EDE F+
Sbjct: 533 EEEEEEDKEEEEEEEDEERREERAEVGA-PLSPDHSEEEEEEEEGL-EEDEPRFT 585
Score = 31.6 bits (70), Expect = 2.0
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 400 GPEEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAE 459
G + E+ EG EE + EE+ E E + G G G E ED G +
Sbjct: 184 GHDGEDDEGEEEEEEEEEEE--EASTEYGHQAHRHRGHGSEEDEDVSDGHHHHGPSHRHQ 241
Query: 460 SYENEDEE 467
+E +D++
Sbjct: 242 GHEEDDDD 249
>gi|242117971 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 38.9 bits (89), Expect = 0.013
Identities = 56/228 (24%), Positives = 81/228 (35%), Gaps = 36/228 (15%)
Query: 355 PTPTSGLGRAQRWAAGLGGTAPSYGNPSSDVQAD--------GALGSRSPPGVGPEEEEG 406
P P G + + AG GG+ + G PS D SR P V
Sbjct: 97 PPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPR 156
Query: 407 EGYEEPDSEEDSEFYENDSNL-GQDQLSQDGSGYENP---------EDEPLGPEDEDSFS 456
G P S + S + G+ LS+ Y P D L P D D +S
Sbjct: 157 SGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRD-DGYS 215
Query: 457 NAESYENEDEELTQPVAR-TMDFLSPHGS----AWDPSREATSLGSQSYEDMRGILYAAP 511
+SY + D P +R T D+ P + S S+ Y D G
Sbjct: 216 TKDSYSSRD----YPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYGDRDGY----G 267
Query: 512 QLRSIRGQP-GPNHEEDADSYENMDNPD---GPDPAWGGGGRMGTWST 555
+ R P G ++ + +SY N + GP P++GG R +S+
Sbjct: 268 RDRDYSDHPSGGSYRDSYESYGNSRSAPLTRGPPPSYGGSSRYDDYSS 315
>gi|21361809 RNA binding motif protein, X-linked-like 1 [Homo
sapiens]
Length = 390
Score = 38.9 bits (89), Expect = 0.013
Identities = 56/228 (24%), Positives = 81/228 (35%), Gaps = 36/228 (15%)
Query: 355 PTPTSGLGRAQRWAAGLGGTAPSYGNPSSDVQAD--------GALGSRSPPGVGPEEEEG 406
P P G + + AG GG+ + G PS D SR P V
Sbjct: 97 PPPPRSRGPPRGFGAGRGGSGGTRGPPSRGGHMDDGGYSMNFNMSSSRGPLPVKRGPPPR 156
Query: 407 EGYEEPDSEEDSEFYENDSNL-GQDQLSQDGSGYENP---------EDEPLGPEDEDSFS 456
G P S + S + G+ LS+ Y P D L P D D +S
Sbjct: 157 SGGPSPKRSAPSGLVRSSSGMGGRAPLSRGRDSYGGPPRREPLPSRRDVYLSPRD-DGYS 215
Query: 457 NAESYENEDEELTQPVAR-TMDFLSPHGS----AWDPSREATSLGSQSYEDMRGILYAAP 511
+SY + D P +R T D+ P + S S+ Y D G
Sbjct: 216 TKDSYSSRD----YPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYGDRDGY----G 267
Query: 512 QLRSIRGQP-GPNHEEDADSYENMDNPD---GPDPAWGGGGRMGTWST 555
+ R P G ++ + +SY N + GP P++GG R +S+
Sbjct: 268 RDRDYSDHPSGGSYRDSYESYGNSRSAPLTRGPPPSYGGSSRYDDYSS 315
>gi|4505913 PMS2 postmeiotic segregation increased 2 isoform a [Homo
sapiens]
Length = 862
Score = 38.1 bits (87), Expect = 0.021
Identities = 41/163 (25%), Positives = 64/163 (39%), Gaps = 24/163 (14%)
Query: 308 VGILHLQRALVLRRKRKRMTDPTRRFFKVTPPPGSGPQNQYGNVLSLPTPTS----GLGR 363
V I L+ A LR T + TP P P Q +LS T + G+ R
Sbjct: 415 VSISRLREAFSLRH-----TTENKPHSPKTPEPRRSPLGQKRGMLSSSTSGAISDKGVLR 469
Query: 364 AQRWAAGLGGTAPSYGNPSSDVQADGALGSRSPPGVGPEEEEGEGYEEPDSEEDSEFYEN 423
Q+ A PS ++V+ D GS S + EG+ PD+
Sbjct: 470 PQKEAVS-SSHGPSDPTDRAEVEKDSGHGSTSV--------DSEGFSIPDTGSHCSSEYA 520
Query: 424 DSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESYENEDE 466
S+ G D E+ + + PE +DSFS+ + + N+++
Sbjct: 521 ASSPG------DRGSQEHVDSQEKAPETDDSFSDVDCHSNQED 557
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 38.1 bits (87), Expect = 0.021
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 17/146 (11%)
Query: 402 EEEEGEGYEEPDSEEDSEFYENDSNLGQDQLSQDGSGYENPEDEPLGPEDEDSFSNAESY 461
EEEE EG+EE + +E + + L + G G E+E LG E+E+ ++ E +
Sbjct: 362 EEEEAEGWEELEQQEA------EVQGPPEALEETGEGRRGAEEEDLGEEEEEGQAHLEDW 415
Query: 462 ENEDEELTQPVARTM---DFLSPHGSAWDPSREATSLGSQSYEDMRGILYAAPQLRS--I 516
+ EL + + L P G + S E Q+ E R Q RS
Sbjct: 416 RGQLSELLNDFEERLEDQERLKPEGQR-EHSEEPGICEEQNPEAER---RREQQGRSGDF 471
Query: 517 RG--QPGPNHEEDADSYENMDNPDGP 540
+G +PGP + + E + +GP
Sbjct: 472 QGADRPGPEEKREEGDTEPLLKQEGP 497
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.136 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,602,339
Number of Sequences: 37866
Number of extensions: 1724550
Number of successful extensions: 8527
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 346
Number of HSP's that attempted gapping in prelim test: 6312
Number of HSP's gapped (non-prelim): 1626
length of query: 556
length of database: 18,247,518
effective HSP length: 107
effective length of query: 449
effective length of database: 14,195,856
effective search space: 6373939344
effective search space used: 6373939344
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.