Guide to the Human Genome
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Search of human proteins with 14150066

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14150066 spermatogenesis associated 11 [Homo sapiens]
         (221 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14150066 spermatogenesis associated 11 [Homo sapiens]              447   e-126
gi|8923019 alkB, alkylation repair homolog 4 [Homo sapiens]            36   0.030
gi|4503377 dihydropyrimidinase-like 2 [Homo sapiens]                   32   0.33 
gi|51243032 oxysterol-binding protein-like protein 8 isoform b [...    31   0.73 
gi|18079218 oxysterol-binding protein-like protein 8 isoform a [...    31   0.73 
gi|4504517 heat shock protein beta-1 [Homo sapiens]                    29   2.8  
gi|149944516 tet oncogene family member 3 [Homo sapiens]               29   3.6  
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]                       29   3.6  
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]                       29   3.6  
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]                       29   3.6  
gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]                        29   3.6  
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]                       29   3.6  
gi|40254924 leucine rich repeat containing 59 [Homo sapiens]           28   4.7  
gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...    28   8.1  
gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...    28   8.1  
gi|14149631 ring finger protein 112 [Homo sapiens]                     28   8.1  

>gi|14150066 spermatogenesis associated 11 [Homo sapiens]
          Length = 221

 Score =  447 bits (1149), Expect = e-126
 Identities = 221/221 (100%), Positives = 221/221 (100%)

Query: 1   MAGTGLLALRTLPGPSWVRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRR 60
           MAGTGLLALRTLPGPSWVRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRR
Sbjct: 1   MAGTGLLALRTLPGPSWVRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRR 60

Query: 61  YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKP 120
           YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKP
Sbjct: 61  YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKP 120

Query: 121 HVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEIL 180
           HVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEIL
Sbjct: 121 HVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEIL 180

Query: 181 RDEESFFGERRIPRGRRISVICRSLPEGMGPGESGQPPPAC 221
           RDEESFFGERRIPRGRRISVICRSLPEGMGPGESGQPPPAC
Sbjct: 181 RDEESFFGERRIPRGRRISVICRSLPEGMGPGESGQPPPAC 221


>gi|8923019 alkB, alkylation repair homolog 4 [Homo sapiens]
          Length = 302

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 40/125 (32%)

Query: 118 IKPHVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWL---------------------- 155
           I PH+D     G  +  L+LLSP+V+ +   + PG  L                      
Sbjct: 166 IDPHLDDAWLWGERLVSLNLLSPTVLSMCR-EAPGSLLLCSAPSAAPEALVDSVIAPSRS 224

Query: 156 --------ELLLEPGSLYILRGSARYDFSHEILRDEESFFGERRIPRGRRISVICRSLPE 207
                    + L   SL +L G+AR+ + H I          RR    RR+ V  R L  
Sbjct: 225 VLCQEVEVAIPLPARSLLVLTGAARHQWKHAI---------HRRHIEARRVCVTFRELSA 275

Query: 208 GMGPG 212
             GPG
Sbjct: 276 EFGPG 280


>gi|4503377 dihydropyrimidinase-like 2 [Homo sapiens]
          Length = 572

 Score = 32.3 bits (72), Expect = 0.33
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 9/74 (12%)

Query: 156 ELLLEPGSLYILRGSARY-------DFSHEILRDEESFFGERRIPRGRRISVICR--SLP 206
           +++LE G+L++  GS RY       DF ++ ++        R +PRG     +C     P
Sbjct: 451 KIVLEDGTLHVTEGSGRYIPRKPFPDFVYKRIKARSRLAELRGVPRGLYDGPVCEVSVTP 510

Query: 207 EGMGPGESGQPPPA 220
           + + P  S +  PA
Sbjct: 511 KTVTPASSAKTSPA 524


>gi|51243032 oxysterol-binding protein-like protein 8 isoform b
           [Homo sapiens]
          Length = 847

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 18/70 (25%), Positives = 32/70 (45%)

Query: 137 LLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEILRDEESFFGERRIPRGR 196
           +L P V+ +  TQ+ G+W+  +L      I R S +  F  ++    E      + P+G 
Sbjct: 128 VLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGE 187

Query: 197 RISVICRSLP 206
            +  I + LP
Sbjct: 188 AVGSITQPLP 197


>gi|18079218 oxysterol-binding protein-like protein 8 isoform a
           [Homo sapiens]
          Length = 889

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 18/70 (25%), Positives = 32/70 (45%)

Query: 137 LLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEILRDEESFFGERRIPRGR 196
           +L P V+ +  TQ+ G+W+  +L      I R S +  F  ++    E      + P+G 
Sbjct: 170 VLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGE 229

Query: 197 RISVICRSLP 206
            +  I + LP
Sbjct: 230 AVGSITQPLP 239


>gi|4504517 heat shock protein beta-1 [Homo sapiens]
          Length = 205

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 17 WVRGSG-PSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAI 70
          W+ GS  P  +  L  AA+  P   + A    LSR+L   +   R+  D W  ++
Sbjct: 45 WLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSL 99


>gi|149944516 tet oncogene family member 3 [Homo sapiens]
          Length = 1660

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 11/52 (21%)

Query: 15 PSWVRGSGPSVLSRLQDA-----------AVVRPGFLSTAEEETLSRELEPE 55
          P W    GP+  +RL+DA           AV   G LST   ET +RE+  E
Sbjct: 45 PDWEAAPGPAHTARLEDAHDLVAFSAVAEAVSSYGALSTRLYETFNREMSRE 96


>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
          Length = 532

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 42  TAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEA 84
           TAE ET  +E + E R+ RYE +  +     +   +K+ W +A
Sbjct: 135 TAENETTEKEEKSESRQERYEIEETETVTKSY---QKNDWRDA 174


>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
          Length = 558

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 42  TAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEA 84
           TAE ET  +E + E R+ RYE +  +     +   +K+ W +A
Sbjct: 135 TAENETTEKEEKSESRQERYEIEETETVTKSY---QKNDWRDA 174


>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
          Length = 564

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 42  TAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEA 84
           TAE ET  +E + E R+ RYE +  +     +   +K+ W +A
Sbjct: 141 TAENETTEKEEKSESRQERYEIEETETVTKSY---QKNDWRDA 180


>gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]
          Length = 538

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 42  TAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEA 84
           TAE ET  +E + E R+ RYE +  +     +   +K+ W +A
Sbjct: 141 TAENETTEKEEKSESRQERYEIEETETVTKSY---QKNDWRDA 180


>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
          Length = 793

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 42  TAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEA 84
           TAE ET  +E + E R+ RYE +  +     +   +K+ W +A
Sbjct: 141 TAENETTEKEEKSESRQERYEIEETETVTKSY---QKNDWRDA 180


>gi|40254924 leucine rich repeat containing 59 [Homo sapiens]
          Length = 307

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 44  EEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEASRA 87
           E E   RE   E  RRR EYD   AA    RE EK    EA++A
Sbjct: 184 ERELRKREKAEEKERRRKEYDALKAA---KREQEKKPKKEANQA 224


>gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform a
           [Homo sapiens]
          Length = 326

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 147 HTQEPGEWLELLLEPGSLYILRGSARYDFSHEILRDE-ESFFGERRIPRGRR 197
           H   P E+      P  ++      R  FS +   D  E FFG RR PRG R
Sbjct: 82  HFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFEDFFGNRRGPRGSR 133


>gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b
           [Homo sapiens]
          Length = 241

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 147 HTQEPGEWLELLLEPGSLYILRGSARYDFSHEILRDE-ESFFGERRIPRGRR 197
           H   P E+      P  ++      R  FS +   D  E FFG RR PRG R
Sbjct: 82  HFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFEDFFGNRRGPRGSR 133


>gi|14149631 ring finger protein 112 [Homo sapiens]
          Length = 632

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 8/115 (6%)

Query: 17  WVRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRET 76
           W+  +GP   S  + AA +        + E   RE E  +R++        +A+    +T
Sbjct: 438 WMGRTGPGFTSPDEMAAQLH----DLRKVEAAKREFEEYVRQQDVATKRIFSALRVLPDT 493

Query: 77  EKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKPHVDS--IKFCG 129
            ++  S    AIL R   A    G+    ++  L+ E +   K  +DS  ++FCG
Sbjct: 494 MRNLLSTQKDAILARHGVALLCKGRD--QTLEALEAELQATAKAFMDSYTMRFCG 546


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.137    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,196,959
Number of Sequences: 37866
Number of extensions: 470241
Number of successful extensions: 1352
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1345
Number of HSP's gapped (non-prelim): 19
length of query: 221
length of database: 18,247,518
effective HSP length: 98
effective length of query: 123
effective length of database: 14,536,650
effective search space: 1788007950
effective search space used: 1788007950
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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