BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|14150066 spermatogenesis associated 11 [Homo sapiens] (221 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|14150066 spermatogenesis associated 11 [Homo sapiens] 447 e-126 gi|8923019 alkB, alkylation repair homolog 4 [Homo sapiens] 36 0.030 gi|4503377 dihydropyrimidinase-like 2 [Homo sapiens] 32 0.33 gi|51243032 oxysterol-binding protein-like protein 8 isoform b [... 31 0.73 gi|18079218 oxysterol-binding protein-like protein 8 isoform a [... 31 0.73 gi|4504517 heat shock protein beta-1 [Homo sapiens] 29 2.8 gi|149944516 tet oncogene family member 3 [Homo sapiens] 29 3.6 gi|15149465 caldesmon 1 isoform 5 [Homo sapiens] 29 3.6 gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 29 3.6 gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 29 3.6 gi|4826657 caldesmon 1 isoform 2 [Homo sapiens] 29 3.6 gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 29 3.6 gi|40254924 leucine rich repeat containing 59 [Homo sapiens] 28 4.7 gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ... 28 8.1 gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b... 28 8.1 gi|14149631 ring finger protein 112 [Homo sapiens] 28 8.1 >gi|14150066 spermatogenesis associated 11 [Homo sapiens] Length = 221 Score = 447 bits (1149), Expect = e-126 Identities = 221/221 (100%), Positives = 221/221 (100%) Query: 1 MAGTGLLALRTLPGPSWVRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRR 60 MAGTGLLALRTLPGPSWVRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRR Sbjct: 1 MAGTGLLALRTLPGPSWVRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRR 60 Query: 61 YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKP 120 YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKP Sbjct: 61 YEYDHWDAAIHGFRETEKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKP 120 Query: 121 HVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEIL 180 HVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEIL Sbjct: 121 HVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEIL 180 Query: 181 RDEESFFGERRIPRGRRISVICRSLPEGMGPGESGQPPPAC 221 RDEESFFGERRIPRGRRISVICRSLPEGMGPGESGQPPPAC Sbjct: 181 RDEESFFGERRIPRGRRISVICRSLPEGMGPGESGQPPPAC 221 >gi|8923019 alkB, alkylation repair homolog 4 [Homo sapiens] Length = 302 Score = 35.8 bits (81), Expect = 0.030 Identities = 33/125 (26%), Positives = 46/125 (36%), Gaps = 40/125 (32%) Query: 118 IKPHVDSIKFCGATIAGLSLLSPSVMRLVHTQEPGEWL---------------------- 155 I PH+D G + L+LLSP+V+ + + PG L Sbjct: 166 IDPHLDDAWLWGERLVSLNLLSPTVLSMCR-EAPGSLLLCSAPSAAPEALVDSVIAPSRS 224 Query: 156 --------ELLLEPGSLYILRGSARYDFSHEILRDEESFFGERRIPRGRRISVICRSLPE 207 + L SL +L G+AR+ + H I RR RR+ V R L Sbjct: 225 VLCQEVEVAIPLPARSLLVLTGAARHQWKHAI---------HRRHIEARRVCVTFRELSA 275 Query: 208 GMGPG 212 GPG Sbjct: 276 EFGPG 280 >gi|4503377 dihydropyrimidinase-like 2 [Homo sapiens] Length = 572 Score = 32.3 bits (72), Expect = 0.33 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 9/74 (12%) Query: 156 ELLLEPGSLYILRGSARY-------DFSHEILRDEESFFGERRIPRGRRISVICR--SLP 206 +++LE G+L++ GS RY DF ++ ++ R +PRG +C P Sbjct: 451 KIVLEDGTLHVTEGSGRYIPRKPFPDFVYKRIKARSRLAELRGVPRGLYDGPVCEVSVTP 510 Query: 207 EGMGPGESGQPPPA 220 + + P S + PA Sbjct: 511 KTVTPASSAKTSPA 524 >gi|51243032 oxysterol-binding protein-like protein 8 isoform b [Homo sapiens] Length = 847 Score = 31.2 bits (69), Expect = 0.73 Identities = 18/70 (25%), Positives = 32/70 (45%) Query: 137 LLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEILRDEESFFGERRIPRGR 196 +L P V+ + TQ+ G+W+ +L I R S + F ++ E + P+G Sbjct: 128 VLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGE 187 Query: 197 RISVICRSLP 206 + I + LP Sbjct: 188 AVGSITQPLP 197 >gi|18079218 oxysterol-binding protein-like protein 8 isoform a [Homo sapiens] Length = 889 Score = 31.2 bits (69), Expect = 0.73 Identities = 18/70 (25%), Positives = 32/70 (45%) Query: 137 LLSPSVMRLVHTQEPGEWLELLLEPGSLYILRGSARYDFSHEILRDEESFFGERRIPRGR 196 +L P V+ + TQ+ G+W+ +L I R S + F ++ E + P+G Sbjct: 170 VLKPGVLLIYKTQKNGQWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGE 229 Query: 197 RISVICRSLP 206 + I + LP Sbjct: 230 AVGSITQPLP 239 >gi|4504517 heat shock protein beta-1 [Homo sapiens] Length = 205 Score = 29.3 bits (64), Expect = 2.8 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 17 WVRGSG-PSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAI 70 W+ GS P + L AA+ P + A LSR+L + R+ D W ++ Sbjct: 45 WLGGSSWPGYVRPLPPAAIESPAVAAPAYSRALSRQLSSGVSEIRHTADRWRVSL 99 >gi|149944516 tet oncogene family member 3 [Homo sapiens] Length = 1660 Score = 28.9 bits (63), Expect = 3.6 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 11/52 (21%) Query: 15 PSWVRGSGPSVLSRLQDA-----------AVVRPGFLSTAEEETLSRELEPE 55 P W GP+ +RL+DA AV G LST ET +RE+ E Sbjct: 45 PDWEAAPGPAHTARLEDAHDLVAFSAVAEAVSSYGALSTRLYETFNREMSRE 96 >gi|15149465 caldesmon 1 isoform 5 [Homo sapiens] Length = 532 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Query: 42 TAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEA 84 TAE ET +E + E R+ RYE + + + +K+ W +A Sbjct: 135 TAENETTEKEEKSESRQERYEIEETETVTKSY---QKNDWRDA 174 >gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] Length = 558 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Query: 42 TAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEA 84 TAE ET +E + E R+ RYE + + + +K+ W +A Sbjct: 135 TAENETTEKEEKSESRQERYEIEETETVTKSY---QKNDWRDA 174 >gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] Length = 564 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Query: 42 TAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEA 84 TAE ET +E + E R+ RYE + + + +K+ W +A Sbjct: 141 TAENETTEKEEKSESRQERYEIEETETVTKSY---QKNDWRDA 180 >gi|4826657 caldesmon 1 isoform 2 [Homo sapiens] Length = 538 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Query: 42 TAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEA 84 TAE ET +E + E R+ RYE + + + +K+ W +A Sbjct: 141 TAENETTEKEEKSESRQERYEIEETETVTKSY---QKNDWRDA 180 >gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] Length = 793 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 3/43 (6%) Query: 42 TAEEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEA 84 TAE ET +E + E R+ RYE + + + +K+ W +A Sbjct: 141 TAENETTEKEEKSESRQERYEIEETETVTKSY---QKNDWRDA 180 >gi|40254924 leucine rich repeat containing 59 [Homo sapiens] Length = 307 Score = 28.5 bits (62), Expect = 4.7 Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query: 44 EEETLSRELEPELRRRRYEYDHWDAAIHGFRETEKSRWSEASRA 87 E E RE E RRR EYD AA RE EK EA++A Sbjct: 184 ERELRKREKAEEKERRRKEYDALKAA---KREQEKKPKKEANQA 224 >gi|17388799 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform a [Homo sapiens] Length = 326 Score = 27.7 bits (60), Expect = 8.1 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 147 HTQEPGEWLELLLEPGSLYILRGSARYDFSHEILRDE-ESFFGERRIPRGRR 197 H P E+ P ++ R FS + D E FFG RR PRG R Sbjct: 82 HFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFEDFFGNRRGPRGSR 133 >gi|4885495 DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b [Homo sapiens] Length = 241 Score = 27.7 bits (60), Expect = 8.1 Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%) Query: 147 HTQEPGEWLELLLEPGSLYILRGSARYDFSHEILRDE-ESFFGERRIPRGRR 197 H P E+ P ++ R FS + D E FFG RR PRG R Sbjct: 82 HFDSPFEFGFTFRNPDDVFREFFGGRDPFSFDFFEDPFEDFFGNRRGPRGSR 133 >gi|14149631 ring finger protein 112 [Homo sapiens] Length = 632 Score = 27.7 bits (60), Expect = 8.1 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 8/115 (6%) Query: 17 WVRGSGPSVLSRLQDAAVVRPGFLSTAEEETLSRELEPELRRRRYEYDHWDAAIHGFRET 76 W+ +GP S + AA + + E RE E +R++ +A+ +T Sbjct: 438 WMGRTGPGFTSPDEMAAQLH----DLRKVEAAKREFEEYVRQQDVATKRIFSALRVLPDT 493 Query: 77 EKSRWSEASRAILQRVQAAAFGPGQTLLSSVHVLDLEARGYIKPHVDS--IKFCG 129 ++ S AIL R A G+ ++ L+ E + K +DS ++FCG Sbjct: 494 MRNLLSTQKDAILARHGVALLCKGRD--QTLEALEAELQATAKAFMDSYTMRFCG 546 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.137 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,196,959 Number of Sequences: 37866 Number of extensions: 470241 Number of successful extensions: 1352 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 1345 Number of HSP's gapped (non-prelim): 19 length of query: 221 length of database: 18,247,518 effective HSP length: 98 effective length of query: 123 effective length of database: 14,536,650 effective search space: 1788007950 effective search space used: 1788007950 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.