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Search of human proteins with 8922479
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|8922479 armadillo repeat-containing protein [Homo sapiens]
(282 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|8922479 armadillo repeat-containing protein [Homo sapiens] 553 e-158
gi|219283155 apoptosis inhibitor 5 isoform c [Homo sapiens] 31 1.4
gi|153945765 mitogen-activated protein kinase kinase kinase 1 [H... 31 1.4
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 31 1.4
gi|189011568 adenomatous polyposis coli [Homo sapiens] 30 1.8
gi|189011566 adenomatous polyposis coli [Homo sapiens] 30 1.8
gi|53759122 adenomatous polyposis coli [Homo sapiens] 30 1.8
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 30 2.4
gi|122937492 SET domain containing 5 [Homo sapiens] 30 2.4
gi|170784859 serine/threonine kinase 31 isoform b [Homo sapiens] 30 3.1
gi|14602443 serine/threonine kinase 31 isoform a [Homo sapiens] 30 3.1
gi|170784856 serine/threonine kinase 31 isoform b [Homo sapiens] 30 3.1
gi|219283152 apoptosis inhibitor 5 isoform a [Homo sapiens] 29 4.1
gi|5729730 apoptosis inhibitor 5 isoform b [Homo sapiens] 29 4.1
gi|6912678 sperm associated antigen 6 isoform 1 [Homo sapiens] 28 6.9
gi|27262641 sperm associated antigen 6 isoform 2 [Homo sapiens] 28 6.9
gi|50811889 centrosomal protein 192kDa [Homo sapiens] 28 6.9
gi|113722133 senataxin [Homo sapiens] 28 9.0
>gi|8922479 armadillo repeat-containing protein [Homo sapiens]
Length = 282
Score = 553 bits (1425), Expect = e-158
Identities = 282/282 (100%), Positives = 282/282 (100%)
Query: 1 MNSSTSTMSEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHPNPPVVHSAL 60
MNSSTSTMSEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHPNPPVVHSAL
Sbjct: 1 MNSSTSTMSEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHPNPPVVHSAL 60
Query: 61 LALRYLAECRANREKMKGELGMMLSLQNVIQKTTTPGETKLLASEIYDILQSSNMADGDS 120
LALRYLAECRANREKMKGELGMMLSLQNVIQKTTTPGETKLLASEIYDILQSSNMADGDS
Sbjct: 61 LALRYLAECRANREKMKGELGMMLSLQNVIQKTTTPGETKLLASEIYDILQSSNMADGDS 120
Query: 121 FNEMNSRRRKAQFFLGTTNKRAKTVVLHIDGLDDTSRRNLCEEALLKIKGVISFTFQMAV 180
FNEMNSRRRKAQFFLGTTNKRAKTVVLHIDGLDDTSRRNLCEEALLKIKGVISFTFQMAV
Sbjct: 121 FNEMNSRRRKAQFFLGTTNKRAKTVVLHIDGLDDTSRRNLCEEALLKIKGVISFTFQMAV 180
Query: 181 QRCVVRIRSDLKAEALASAIASTKVMKAQQVVKSESGEEMLVPFQDTPVEVEQNTELPDY 240
QRCVVRIRSDLKAEALASAIASTKVMKAQQVVKSESGEEMLVPFQDTPVEVEQNTELPDY
Sbjct: 181 QRCVVRIRSDLKAEALASAIASTKVMKAQQVVKSESGEEMLVPFQDTPVEVEQNTELPDY 240
Query: 241 LPEDESPTKEQDKAVSRVGSHPEGGASWLSTAANFLSRSFYW 282
LPEDESPTKEQDKAVSRVGSHPEGGASWLSTAANFLSRSFYW
Sbjct: 241 LPEDESPTKEQDKAVSRVGSHPEGGASWLSTAANFLSRSFYW 282
>gi|219283155 apoptosis inhibitor 5 isoform c [Homo sapiens]
Length = 450
Score = 30.8 bits (68), Expect = 1.4
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 119 DSFNEMNSRRRKA-----QFFLGTTNKRAKTVVLHIDGLDDTSRRNLCEEALLKI----- 168
D+ ++ RR+A QF G R ++ + DD++ NL ALL I
Sbjct: 16 DATEQVGQIRRQAIKELPQFATGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDA 75
Query: 169 KGVISFTFQMAVQ-------RCVVRIRSDLKA---EALASAIASTKVMKAQQVVKSESGE 218
KG + F +Q R + + + LK E L + + ++++V++ +GE
Sbjct: 76 KGTLGGLFSQILQGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVLEDVTGE 135
Query: 219 EMLV 222
E ++
Sbjct: 136 EFVL 139
>gi|153945765 mitogen-activated protein kinase kinase kinase 1 [Homo
sapiens]
Length = 1512
Score = 30.8 bits (68), Expect = 1.4
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 181 QRCVVRIRSDLKAEALASAIASTKVMKAQQVVKS---ESGEEMLVPFQDTPVEVEQNTEL 237
Q+C ++ ++ + EALA A+A + A +V E+GE++++ QDTP + +T+
Sbjct: 1175 QKCKEKMEAE-EEEALAIAMAMSASQDALPIVPQLQVENGEDIIIIQQDTPETLPGHTKA 1233
Query: 238 PDYLPEDESPTKEQ 251
ED K Q
Sbjct: 1234 KQPYREDTEWLKGQ 1247
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 30.8 bits (68), Expect = 1.4
Identities = 19/76 (25%), Positives = 35/76 (46%)
Query: 8 MSEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHPNPPVVHSALLALRYLA 67
M+E+P + N +AD +V++ G + + +++P P V AL AL ++
Sbjct: 2144 MTEDPSVHEIANNALYNSADYSYSHEVVRNVGGISVIESLLNNPYPSVRQKALNALNNIS 2203
Query: 68 ECRANREKMKGELGMM 83
N K+K L +
Sbjct: 2204 VAAENHRKVKTYLNQV 2219
>gi|189011568 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 30.4 bits (67), Expect = 1.8
Identities = 28/136 (20%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 3 SSTSTMSEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHPNPPVVHSALLA 62
S T+T++ ++ + L A + R I+++ CL L+ + + +V +A
Sbjct: 624 SQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGT 683
Query: 63 LRYLAECRANREKMKGELGMMLSLQNVI---QKTTTPGET----KLLASEIYDILQSSNM 115
L L+ ++ ++G + L+N+I K G L+A+ ++ M
Sbjct: 684 LWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPAKYKDANIM 743
Query: 116 ADGDSFNEMNSRRRKA 131
+ G S ++ R++KA
Sbjct: 744 SPGSSLPSLHVRKQKA 759
>gi|189011566 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 30.4 bits (67), Expect = 1.8
Identities = 28/136 (20%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 3 SSTSTMSEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHPNPPVVHSALLA 62
S T+T++ ++ + L A + R I+++ CL L+ + + +V +A
Sbjct: 624 SQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGT 683
Query: 63 LRYLAECRANREKMKGELGMMLSLQNVI---QKTTTPGET----KLLASEIYDILQSSNM 115
L L+ ++ ++G + L+N+I K G L+A+ ++ M
Sbjct: 684 LWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPAKYKDANIM 743
Query: 116 ADGDSFNEMNSRRRKA 131
+ G S ++ R++KA
Sbjct: 744 SPGSSLPSLHVRKQKA 759
>gi|53759122 adenomatous polyposis coli [Homo sapiens]
Length = 2843
Score = 30.4 bits (67), Expect = 1.8
Identities = 28/136 (20%), Positives = 60/136 (44%), Gaps = 7/136 (5%)
Query: 3 SSTSTMSEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHPNPPVVHSALLA 62
S T+T++ ++ + L A + R I+++ CL L+ + + +V +A
Sbjct: 624 SQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSHSLTIVSNACGT 683
Query: 63 LRYLAECRANREKMKGELGMMLSLQNVI---QKTTTPGET----KLLASEIYDILQSSNM 115
L L+ ++ ++G + L+N+I K G L+A+ ++ M
Sbjct: 684 LWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLMANRPAKYKDANIM 743
Query: 116 ADGDSFNEMNSRRRKA 131
+ G S ++ R++KA
Sbjct: 744 SPGSSLPSLHVRKQKA 759
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 30.0 bits (66), Expect = 2.4
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 13/160 (8%)
Query: 106 IYDILQSSNMADGDSFNEMNSRRRKAQFFLGTTNKRAKTVVLHIDGLDDTSRRNLCEEAL 165
++ L S GD + +S+ + + T K + H + + + N E++L
Sbjct: 195 VFSPLNKSETKSGDKIKKKDSKSIEKKRGRPPTFPGVKIKITHGKDISELPKGNK-EDSL 253
Query: 166 LKIKGVISFTFQMAVQRCVVRIRSDLKAEALASAIASTKVM---KAQQVVKSESGEEMLV 222
KIK S TFQ A + + ++R+ K L S + K+ K Q+V+ G
Sbjct: 254 KKIKRTPSATFQQATK--IKKLRAG-KLSPLKSKFKTGKLQIGRKGVQIVR-RRGRPPST 309
Query: 223 PFQDTPVEVEQNTEL--PDYLPEDES---PTKEQDKAVSR 257
TP + N+EL P + +D+ P ++DK V R
Sbjct: 310 ERIKTPSGLLINSELEKPQKVRKDKEGTPPLTKEDKTVVR 349
>gi|122937492 SET domain containing 5 [Homo sapiens]
Length = 1442
Score = 30.0 bits (66), Expect = 2.4
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 186 RIRSDLKAEALASA---IASTKVMKAQQVVKSESGEEMLVPFQDTPVEVEQNTELPD 239
R R D K EA+ A + K + Q + +S S E+ +TPV E TE P+
Sbjct: 508 RTREDRKVEAIMHAFENLEKRKKRRDQPLEQSNSDVEITTTTSETPVGEETKTEAPE 564
>gi|170784859 serine/threonine kinase 31 isoform b [Homo sapiens]
Length = 996
Score = 29.6 bits (65), Expect = 3.1
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 196 LASAIASTKVMKAQQVVKSESGEEMLVPFQDTPVEVEQNTELPDYLPEDESPTKEQDKAV 255
L S I M A+QV+ +E L+P + + E++TE Y E+E T+ DK +
Sbjct: 928 LCSLICYRSSMTAEQVLNAEC---FLMPKEQSVPNPEKDTEYTLYKKEEEIKTENLDKCM 984
Query: 256 SR 257
+
Sbjct: 985 EK 986
>gi|14602443 serine/threonine kinase 31 isoform a [Homo sapiens]
Length = 1019
Score = 29.6 bits (65), Expect = 3.1
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 196 LASAIASTKVMKAQQVVKSESGEEMLVPFQDTPVEVEQNTELPDYLPEDESPTKEQDKAV 255
L S I M A+QV+ +E L+P + + E++TE Y E+E T+ DK +
Sbjct: 951 LCSLICYRSSMTAEQVLNAEC---FLMPKEQSVPNPEKDTEYTLYKKEEEIKTENLDKCM 1007
Query: 256 SR 257
+
Sbjct: 1008 EK 1009
>gi|170784856 serine/threonine kinase 31 isoform b [Homo sapiens]
Length = 996
Score = 29.6 bits (65), Expect = 3.1
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 196 LASAIASTKVMKAQQVVKSESGEEMLVPFQDTPVEVEQNTELPDYLPEDESPTKEQDKAV 255
L S I M A+QV+ +E L+P + + E++TE Y E+E T+ DK +
Sbjct: 928 LCSLICYRSSMTAEQVLNAEC---FLMPKEQSVPNPEKDTEYTLYKKEEEIKTENLDKCM 984
Query: 256 SR 257
+
Sbjct: 985 EK 986
>gi|219283152 apoptosis inhibitor 5 isoform a [Homo sapiens]
Length = 524
Score = 29.3 bits (64), Expect = 4.1
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 132 QFFLGTTNKRAKTVVLHIDGLDDTSRRNLCEEALLKI-----KGVISFTFQMAVQ----- 181
QF G R ++ + DD++ NL ALL I KG + F +Q
Sbjct: 88 QFATGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQILQGEDIV 147
Query: 182 --RCVVRIRSDLKA---EALASAIASTKVMKAQQVVKSESGEEMLV 222
R + + + LK E L + + ++++V++ +GEE ++
Sbjct: 148 RERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVLEDVTGEEFVL 193
>gi|5729730 apoptosis inhibitor 5 isoform b [Homo sapiens]
Length = 504
Score = 29.3 bits (64), Expect = 4.1
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 132 QFFLGTTNKRAKTVVLHIDGLDDTSRRNLCEEALLKI-----KGVISFTFQMAVQ----- 181
QF G R ++ + DD++ NL ALL I KG + F +Q
Sbjct: 88 QFATGENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQILQGEDIV 147
Query: 182 --RCVVRIRSDLKA---EALASAIASTKVMKAQQVVKSESGEEMLV 222
R + + + LK E L + + ++++V++ +GEE ++
Sbjct: 148 RERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVLEDVTGEEFVL 193
>gi|6912678 sperm associated antigen 6 isoform 1 [Homo sapiens]
Length = 509
Score = 28.5 bits (62), Expect = 6.9
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 28 PLNRRAIVQDQGCLPGLILFMDHPNPPVVHSALLALRYLAECRANREKMKGELGMMLSLQ 87
P +AIV D G L L++ ++ +P V +A ALRY+A A + + G + L
Sbjct: 115 PQLAQAIV-DCGALDTLVICLEDFDPGVKEAAAWALRYIARHNAELSQAVVDAGAVPLLV 173
Query: 88 NVIQKTTTPGETKLLASEIYDILQSS 113
IQ+ ++ AS + DI + S
Sbjct: 174 LCIQEPEI-ALKRIAASALSDIAKHS 198
>gi|27262641 sperm associated antigen 6 isoform 2 [Homo sapiens]
Length = 458
Score = 28.5 bits (62), Expect = 6.9
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 28 PLNRRAIVQDQGCLPGLILFMDHPNPPVVHSALLALRYLAECRANREKMKGELGMMLSLQ 87
P +AIV D G L L++ ++ +P V +A ALRY+A A + + G + L
Sbjct: 115 PQLAQAIV-DCGALDTLVICLEDFDPGVKEAAAWALRYIARHNAELSQAVVDAGAVPLLV 173
Query: 88 NVIQKTTTPGETKLLASEIYDILQSS 113
IQ+ ++ AS + DI + S
Sbjct: 174 LCIQEPEI-ALKRIAASALSDIAKHS 198
>gi|50811889 centrosomal protein 192kDa [Homo sapiens]
Length = 1941
Score = 28.5 bits (62), Expect = 6.9
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 170 GVISFTFQMAVQRCVVRIRSDLKAEALASAIASTKVMKAQQVVKSESGEEMLVPFQD 226
GV TF +A C + ++AEALAS + T + ++ V++ E+ ++ ++ F D
Sbjct: 858 GVFRCTFSVASWPCSTDAETIVQAEALASTVTLTAIAES-PVIEVETEKKDVLDFGD 913
>gi|113722133 senataxin [Homo sapiens]
Length = 2677
Score = 28.1 bits (61), Expect = 9.0
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 14/79 (17%)
Query: 42 PGLILFMDHPNPPVVHSALLALRYLAECRANREKMKG------------ELGMMLSLQNV 89
PG+ LF+ HPN V A+L R L + +R+ ELG++ S
Sbjct: 154 PGIYLFLVHPNEMVRRWAILTARNLG--KVDRDDYYDLQEVLLCLFKVIELGLLESPDIY 211
Query: 90 IQKTTTPGETKLLASEIYD 108
G+ LL S +YD
Sbjct: 212 TSSVLEKGKLILLPSHMYD 230
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,643,279
Number of Sequences: 37866
Number of extensions: 374040
Number of successful extensions: 1197
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1189
Number of HSP's gapped (non-prelim): 24
length of query: 282
length of database: 18,247,518
effective HSP length: 101
effective length of query: 181
effective length of database: 14,423,052
effective search space: 2610572412
effective search space used: 2610572412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.