Guide to the Human Genome
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Search of human proteins with 89040598

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|89040598 PREDICTED: hypothetical protein isoform 4 [Homo
sapiens]
         (83 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169209671 PREDICTED: hypothetical protein isoform 1 [Homo sap...   171   1e-43
gi|89040598 PREDICTED: hypothetical protein isoform 4 [Homo sapi...   171   1e-43
gi|89039658 PREDICTED: hypothetical protein isoform 2 [Homo sapi...   171   1e-43
gi|239756470 PREDICTED: hypothetical protein isoform 2 [Homo sap...   164   1e-41
gi|239750996 PREDICTED: hypothetical protein [Homo sapiens]           164   1e-41
gi|239745397 PREDICTED: hypothetical protein [Homo sapiens]           164   1e-41
gi|239756468 PREDICTED: hypothetical protein isoform 3 [Homo sap...   146   3e-36
gi|239750994 PREDICTED: hypothetical protein [Homo sapiens]           146   3e-36
gi|239745395 PREDICTED: hypothetical protein [Homo sapiens]           146   3e-36
gi|242332502 hypothetical protein LOC9674 [Homo sapiens]               35   0.010
gi|242332500 hypothetical protein LOC9674 [Homo sapiens]               35   0.010
gi|242332498 hypothetical protein LOC9674 [Homo sapiens]               35   0.010
gi|242332496 hypothetical protein LOC9674 [Homo sapiens]               35   0.010
gi|244790138 hypothetical protein LOC643008 [Homo sapiens]             33   0.049
gi|28557777 immunoglobulin-like domain containing receptor 1 [Ho...    30   0.32 
gi|244790353 hypothetical protein LOC100130933 [Homo sapiens]          29   0.92 
gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]             28   1.2  
gi|4757886 pituitary tumor-transforming gene 1 protein-interacti...    28   1.2  
gi|63025206 hypothetical protein LOC221061 [Homo sapiens]              28   1.6  
gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]     28   2.0  
gi|4502461 betacellulin [Homo sapiens]                                 28   2.0  
gi|225579067 solute carrier family 12, member 4 isoform e [Homo ...    27   2.7  
gi|225579065 solute carrier family 12, member 4 isoform d [Homo ...    27   2.7  
gi|225579063 solute carrier family 12, member 4 isoform c [Homo ...    27   2.7  
gi|225579061 solute carrier family 12, member 4 isoform b [Homo ...    27   2.7  
gi|4827006 solute carrier family 12, member 4 isoform a [Homo sa...    27   2.7  
gi|33359221 dyslexia susceptibility 2-like [Homo sapiens]              27   3.5  
gi|191252801 WDFY family member 4 [Homo sapiens]                       27   3.5  
gi|94536846 synaptotagmin VIII [Homo sapiens]                          27   3.5  
gi|30172548 developmentally regulated protein TPO1 [Homo sapiens]      27   3.5  

>gi|169209671 PREDICTED: hypothetical protein isoform 1 [Homo
          sapiens]
          Length = 83

 Score =  171 bits (432), Expect = 1e-43
 Identities = 83/83 (100%), Positives = 83/83 (100%)

Query: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60
          MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS
Sbjct: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60

Query: 61 PGPRRESPRKERPKGVDNLALEP 83
          PGPRRESPRKERPKGVDNLALEP
Sbjct: 61 PGPRRESPRKERPKGVDNLALEP 83


>gi|89040598 PREDICTED: hypothetical protein isoform 4 [Homo
          sapiens]
          Length = 83

 Score =  171 bits (432), Expect = 1e-43
 Identities = 83/83 (100%), Positives = 83/83 (100%)

Query: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60
          MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS
Sbjct: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60

Query: 61 PGPRRESPRKERPKGVDNLALEP 83
          PGPRRESPRKERPKGVDNLALEP
Sbjct: 61 PGPRRESPRKERPKGVDNLALEP 83


>gi|89039658 PREDICTED: hypothetical protein isoform 2 [Homo
          sapiens]
          Length = 83

 Score =  171 bits (432), Expect = 1e-43
 Identities = 83/83 (100%), Positives = 83/83 (100%)

Query: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60
          MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS
Sbjct: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60

Query: 61 PGPRRESPRKERPKGVDNLALEP 83
          PGPRRESPRKERPKGVDNLALEP
Sbjct: 61 PGPRRESPRKERPKGVDNLALEP 83


>gi|239756470 PREDICTED: hypothetical protein isoform 2 [Homo
          sapiens]
          Length = 88

 Score =  164 bits (416), Expect = 1e-41
 Identities = 83/88 (94%), Positives = 83/88 (94%), Gaps = 5/88 (5%)

Query: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60
          MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS
Sbjct: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60

Query: 61 PGPRRESPR-----KERPKGVDNLALEP 83
          PGPRRESPR     KERPKGVDNLALEP
Sbjct: 61 PGPRRESPRKVSPWKERPKGVDNLALEP 88


>gi|239750996 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 88

 Score =  164 bits (416), Expect = 1e-41
 Identities = 83/88 (94%), Positives = 83/88 (94%), Gaps = 5/88 (5%)

Query: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60
          MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS
Sbjct: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60

Query: 61 PGPRRESPR-----KERPKGVDNLALEP 83
          PGPRRESPR     KERPKGVDNLALEP
Sbjct: 61 PGPRRESPRKVSPWKERPKGVDNLALEP 88


>gi|239745397 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 88

 Score =  164 bits (416), Expect = 1e-41
 Identities = 83/88 (94%), Positives = 83/88 (94%), Gaps = 5/88 (5%)

Query: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60
          MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS
Sbjct: 1  MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60

Query: 61 PGPRRESPR-----KERPKGVDNLALEP 83
          PGPRRESPR     KERPKGVDNLALEP
Sbjct: 61 PGPRRESPRKVSPWKERPKGVDNLALEP 88


>gi|239756468 PREDICTED: hypothetical protein isoform 3 [Homo
           sapiens]
          Length = 135

 Score =  146 bits (369), Expect = 3e-36
 Identities = 83/135 (61%), Positives = 83/135 (61%), Gaps = 52/135 (38%)

Query: 1   MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60
           MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS
Sbjct: 1   MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60

Query: 61  PGPRRESPRK-------------------------------------------------- 70
           PGPRRESPRK                                                  
Sbjct: 61  PGPRRESPRKVSPWKVSPAGLWDLHGTVLGVEAEGEGSGGKGAHPPREQRANLLGPAVLL 120

Query: 71  --ERPKGVDNLALEP 83
             ERPKGVDNLALEP
Sbjct: 121 VQERPKGVDNLALEP 135


>gi|239750994 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 135

 Score =  146 bits (369), Expect = 3e-36
 Identities = 83/135 (61%), Positives = 83/135 (61%), Gaps = 52/135 (38%)

Query: 1   MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60
           MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS
Sbjct: 1   MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60

Query: 61  PGPRRESPRK-------------------------------------------------- 70
           PGPRRESPRK                                                  
Sbjct: 61  PGPRRESPRKVSPWKVSPAGLWDLHGTVLGVEAEGEGSGGKGAHPPREQRANLLGPAVLL 120

Query: 71  --ERPKGVDNLALEP 83
             ERPKGVDNLALEP
Sbjct: 121 VQERPKGVDNLALEP 135


>gi|239745395 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 135

 Score =  146 bits (369), Expect = 3e-36
 Identities = 83/135 (61%), Positives = 83/135 (61%), Gaps = 52/135 (38%)

Query: 1   MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60
           MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS
Sbjct: 1   MAVSTEELEATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSS 60

Query: 61  PGPRRESPRK-------------------------------------------------- 70
           PGPRRESPRK                                                  
Sbjct: 61  PGPRRESPRKVSPWKVSPAGLWDLHGTVLGVEAEGEGSGGKGAHPPREQRANLLGPAVLL 120

Query: 71  --ERPKGVDNLALEP 83
             ERPKGVDNLALEP
Sbjct: 121 VQERPKGVDNLALEP 135


>gi|242332502 hypothetical protein LOC9674 [Homo sapiens]
          Length = 99

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 11/62 (17%)

Query: 24 FFQSTWDTVAF---------IVFLTFMGTVLLLLLLVVAHCC--CCSSPGPRRESPRKER 72
          FF S WDT+           I     +G  LL+++ ++  CC  C S PG R + P K +
Sbjct: 7  FFSSIWDTILTKHQEGIYNTICLGVLLGLPLLVIITLLFICCHCCWSPPGKRGQQPEKNK 66

Query: 73 PK 74
           K
Sbjct: 67 KK 68


>gi|242332500 hypothetical protein LOC9674 [Homo sapiens]
          Length = 99

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 11/62 (17%)

Query: 24 FFQSTWDTVAF---------IVFLTFMGTVLLLLLLVVAHCC--CCSSPGPRRESPRKER 72
          FF S WDT+           I     +G  LL+++ ++  CC  C S PG R + P K +
Sbjct: 7  FFSSIWDTILTKHQEGIYNTICLGVLLGLPLLVIITLLFICCHCCWSPPGKRGQQPEKNK 66

Query: 73 PK 74
           K
Sbjct: 67 KK 68


>gi|242332498 hypothetical protein LOC9674 [Homo sapiens]
          Length = 99

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 11/62 (17%)

Query: 24 FFQSTWDTVAF---------IVFLTFMGTVLLLLLLVVAHCC--CCSSPGPRRESPRKER 72
          FF S WDT+           I     +G  LL+++ ++  CC  C S PG R + P K +
Sbjct: 7  FFSSIWDTILTKHQEGIYNTICLGVLLGLPLLVIITLLFICCHCCWSPPGKRGQQPEKNK 66

Query: 73 PK 74
           K
Sbjct: 67 KK 68


>gi|242332496 hypothetical protein LOC9674 [Homo sapiens]
          Length = 99

 Score = 35.4 bits (80), Expect = 0.010
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 11/62 (17%)

Query: 24 FFQSTWDTVAF---------IVFLTFMGTVLLLLLLVVAHCC--CCSSPGPRRESPRKER 72
          FF S WDT+           I     +G  LL+++ ++  CC  C S PG R + P K +
Sbjct: 7  FFSSIWDTILTKHQEGIYNTICLGVLLGLPLLVIITLLFICCHCCWSPPGKRGQQPEKNK 66

Query: 73 PK 74
           K
Sbjct: 67 KK 68


>gi|244790138 hypothetical protein LOC643008 [Homo sapiens]
          Length = 77

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 4/32 (12%)

Query: 30 DTVAFIVFLTFMGTVLLLLLLVVA----HCCC 57
          + VAF V + F  TVLLLLL+  +    HCCC
Sbjct: 31 EIVAFSVIILFTATVLLLLLIACSCCCTHCCC 62


>gi|28557777 immunoglobulin-like domain containing receptor 1 [Homo
           sapiens]
          Length = 502

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 4/30 (13%)

Query: 29  WDTVAFIVFLTFMGTVLLLLLLVVAHCCCC 58
           W TV FI+    +G +LLLLL+ V  C CC
Sbjct: 168 WLTVIFII----LGALLLLLLIGVCWCQCC 193


>gi|244790353 hypothetical protein LOC100130933 [Homo sapiens]
          Length = 62

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 24 FFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSSPGPRRESPRKE 71
          F+Q+ WD     V + F+  VLLL+L  +      S+   + E+  +E
Sbjct: 15 FWQNPWDQGGLAVIILFITAVLLLILFAIVFGLLTSTENTQCEAGEEE 62


>gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]
          Length = 794

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 15/65 (23%), Positives = 25/65 (38%)

Query: 9   EATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSSPGPRRESP 68
           E  ++++  +L   Q     WD     +    +GTV+               PGPR   P
Sbjct: 723 ETNIRDMFTQLDMDQLLGPEWDLYLMTIIALLLGTVIAYRQRQHQDMPAPRPPGPRPAPP 782

Query: 69  RKERP 73
           ++E P
Sbjct: 783 QQEGP 787


>gi|4757886 pituitary tumor-transforming gene 1 protein-interacting
           protein precursor [Homo sapiens]
          Length = 180

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 15/45 (33%), Positives = 19/45 (42%)

Query: 32  VAFIVFLTFMGTVLLLLLLVVAHCCCCSSPGPRRESPRKERPKGV 76
           V F   +  M  V   LLL +A CCCC     R   P +   K +
Sbjct: 93  VNFEALIITMSVVGGTLLLGIAICCCCCCRRKRSRKPDRSEEKAM 137


>gi|63025206 hypothetical protein LOC221061 [Homo sapiens]
          Length = 890

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 14/52 (26%), Positives = 28/52 (53%)

Query: 27  STWDTVAFIVFLTFMGTVLLLLLLVVAHCCCCSSPGPRRESPRKERPKGVDN 78
           +T+ TV  +  L  M  +LL+LL ++ + C      PR+   + + P G+++
Sbjct: 299 TTYHTVFLLAILGGMAFILLVLLCLLLYYCRRKCLKPRQHHRKLQLPAGLES 350


>gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]
          Length = 319

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 32  VAFIVFLTFMGTVLLLLLLVVAHCCCCSSPGPRRESPRKERP 73
           VA  V +       L+++ ++ +CCCC       E     RP
Sbjct: 235 VALYVGIAVGVVAALIIIGIIIYCCCCRGKDDNTEDKEDARP 276


>gi|4502461 betacellulin [Homo sapiens]
          Length = 178

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 10/37 (27%), Positives = 21/37 (56%)

Query: 35  IVFLTFMGTVLLLLLLVVAHCCCCSSPGPRRESPRKE 71
           I+ +  +  +++ ++LV+  C CC     RR+  +KE
Sbjct: 119 ILVICLIAVMVVFIILVIGVCTCCHPLRKRRKRKKKE 155


>gi|225579067 solute carrier family 12, member 4 isoform e [Homo
           sapiens]
          Length = 1054

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 26  QSTWDTVAFIVFLTFMGTV-LLLLLLVVAHCCCCS 59
           Q+ +  + F+     +GT  +L  LL+V  CCCC+
Sbjct: 99  QNIFGVILFLRLTWMVGTAGVLQALLIVLICCCCT 133


>gi|225579065 solute carrier family 12, member 4 isoform d [Homo
           sapiens]
          Length = 1079

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 26  QSTWDTVAFIVFLTFMGTV-LLLLLLVVAHCCCCS 59
           Q+ +  + F+     +GT  +L  LL+V  CCCC+
Sbjct: 124 QNIFGVILFLRLTWMVGTAGVLQALLIVLICCCCT 158


>gi|225579063 solute carrier family 12, member 4 isoform c [Homo
           sapiens]
          Length = 1087

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 26  QSTWDTVAFIVFLTFMGTV-LLLLLLVVAHCCCCS 59
           Q+ +  + F+     +GT  +L  LL+V  CCCC+
Sbjct: 132 QNIFGVILFLRLTWMVGTAGVLQALLIVLICCCCT 166


>gi|225579061 solute carrier family 12, member 4 isoform b [Homo
           sapiens]
          Length = 1079

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 26  QSTWDTVAFIVFLTFMGTV-LLLLLLVVAHCCCCS 59
           Q+ +  + F+     +GT  +L  LL+V  CCCC+
Sbjct: 130 QNIFGVILFLRLTWMVGTAGVLQALLIVLICCCCT 164


>gi|4827006 solute carrier family 12, member 4 isoform a [Homo
           sapiens]
          Length = 1085

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 26  QSTWDTVAFIVFLTFMGTV-LLLLLLVVAHCCCCS 59
           Q+ +  + F+     +GT  +L  LL+V  CCCC+
Sbjct: 130 QNIFGVILFLRLTWMVGTAGVLQALLIVLICCCCT 164


>gi|33359221 dyslexia susceptibility 2-like [Homo sapiens]
          Length = 1049

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 31  TVAFIVFLTFMGTVLLLLLLVVAHCCCCSSPG-PRRESPRK 70
           +V +++  TF+  V L +L     CCC    G P+R+S  K
Sbjct: 929 SVLYVIIATFVIVVALGILSWTVICCCKRQKGKPKRKSKYK 969


>gi|191252801 WDFY family member 4 [Homo sapiens]
          Length = 3184

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 6/47 (12%)

Query: 9    EATVQEVLGRLKSHQFFQSTWDTVAFIVFLTFMGTVLLLLLLVVAHC 55
            + ++ E LG L    F Q  WD    +VF T+   +  LL L+  HC
Sbjct: 2026 QQSLSECLGLLSILGFLQEHWD----VVFATYNSNISFLLCLM--HC 2066


>gi|94536846 synaptotagmin VIII [Homo sapiens]
          Length = 401

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)

Query: 44 VLLLLLLVVAHCCCCSSPGPRRESPRKERPKGV 76
          VLL+  L+ A CCCC      R+ PR +   G+
Sbjct: 60 VLLVSCLLCAACCCCRR---HRKKPRDKESVGL 89


>gi|30172548 developmentally regulated protein TPO1 [Homo sapiens]
          Length = 423

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 3/28 (10%)

Query: 50  LVVAHCCCCSSPG---PRRESPRKERPK 74
           L +A CC C SPG      + P KE P+
Sbjct: 350 LEIARCCFCFSPGGEDTEEQQPGKEGPR 377


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.137    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,242,118
Number of Sequences: 37866
Number of extensions: 114714
Number of successful extensions: 890
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 821
Number of HSP's gapped (non-prelim): 61
length of query: 83
length of database: 18,247,518
effective HSP length: 55
effective length of query: 28
effective length of database: 16,164,888
effective search space: 452616864
effective search space used: 452616864
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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