| Name: LOC643008 | Sequence: fasta or formatted (77aa) | NCBI GI: 244790138 | |
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Description: hypothetical protein LOC643008
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 9.1 7 2 C cysteine 9.1 7 3 D aspartate 1.3 1 1 E glutamate 6.5 5 1 F phenylalanine 3.9 3 1 G glycine 2.6 2 1 H histidine 1.3 1 1 I isoleucine 5.2 4 2 K lysine 2.6 2 1 L leucine 14.3 11 5 M methionine 2.6 2 1 N asparagine 0.0 0 0 P proline 7.8 6 2 Q glutamine 6.5 5 1 R arginine 7.8 6 2 S serine 2.6 2 1 T threonine 6.5 5 1 V valine 10.4 8 1 W tryptophan 0.0 0 0 Y tyrosine 0.0 0 0 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC643008 LSR 0.090 LISCH protein isoform 2 SYT2 0.082 synaptotagmin II SYT2 0.082 synaptotagmin II ILDR1 0.075 immunoglobulin-like domain containing receptor 1 [Ho... LOC440335 0.060 PREDICTED: hypothetical protein isoform 2 LOC440335 0.060 PREDICTED: hypothetical protein isoform 3 LOC440335 0.060 PREDICTED: hypothetical protein LOC440335 0.060 PREDICTED: hypothetical protein LOC440335 0.060 PREDICTED: hypothetical protein LOC440335 0.060 PREDICTED: hypothetical protein LOC440335 0.060 PREDICTED: hypothetical protein isoform 1 LOC440335 0.060 PREDICTED: hypothetical protein isoform 4 LOC440335 0.060 PREDICTED: hypothetical protein isoform 2 IGSF5 0.052 immunoglobulin superfamily 5 like GPR15 0.045 G protein-coupled receptor 15 LSR 0.037 LISCH protein isoform 1 SHISA5 0.037 scotin PTTG1IP 0.037 pituitary tumor-transforming gene 1 protein-interacti... DNAJC5 0.030 DnaJ (Hsp40) homolog, subfamily C, member 5 DNAJC5G 0.030 DnaJ (Hsp40) homolog, subfamily C, member 5 gamma [H... CECR6 0.022 cat eye syndrome chromosome region, candidate 6 isof... LOC100128160 0.022 PREDICTED: similar to mCG127065 LOC100128160 0.022 PREDICTED: similar to mCG127065 DNAJC5B 0.022 DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Ho... TAS2R45 0.022 taste receptor, type 2, member 45 OR1F1 0.022 olfactory receptor, family 1, subfamily F, member 1 [... ILDR2 0.015 immunoglobulin-like domain containing receptor 2 [Ho... LRSAM1 0.015 leucine rich repeat and sterile alpha motif containi... LRSAM1 0.015 leucine rich repeat and sterile alpha motif containi...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
