Search of human proteins with 88987386

Search of human proteins with 88987386

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|88987386 PREDICTED: similar to TBP-associated factor 11
[Homo sapiens]
         (198 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|88987386 PREDICTED: similar to TBP-associated factor 11 [Homo...   392   e-109
gi|51464888 PREDICTED: similar to TBP-associated factor 11 [Homo...   392   e-109
gi|169167765 PREDICTED: similar to TBP-associated factor 11 [Hom...   386   e-108
gi|169167771 PREDICTED: similar to TBP-associated factor 11 [Hom...   373   e-104
gi|169167754 PREDICTED: similar to TBP-associated factor 11 [Hom...   373   e-104
gi|239748523 PREDICTED: similar to TBP-associated factor 11 [Hom...   373   e-104
gi|239742500 PREDICTED: similar to TBP-associated factor 11 [Hom...   373   e-104
gi|113416493 PREDICTED: similar to TBP-associated factor 11 [Hom...   373   e-104
gi|113416499 PREDICTED: similar to TBP-associated factor 11 [Hom...   373   e-104
gi|51464852 PREDICTED: similar to TBP-associated factor 11 [Homo...   373   e-104
gi|51464850 PREDICTED: similar to TBP-associated factor 11 [Homo...   373   e-104
gi|239742498 PREDICTED: similar to TBP-associated factor 11 [Hom...   372   e-103
gi|51464848 PREDICTED: similar to TBP-associated factor 11 [Homo...   372   e-103
gi|113416481 PREDICTED: similar to TBP-associated factor 11 [Hom...   369   e-103
gi|169167748 PREDICTED: similar to hCG1807616 [Homo sapiens]          352   2e-97
gi|169168506 PREDICTED: similar to hCG1807616 [Homo sapiens]          352   2e-97
gi|169167591 PREDICTED: hypothetical protein LOC285697 [Homo sap...   352   2e-97
gi|169167767 PREDICTED: similar to TBP-associated factor 11 [Hom...   345   2e-95
gi|169167869 PREDICTED: similar to TBP-associated factor 11 [Hom...   345   2e-95
gi|239742504 PREDICTED: hypothetical protein XP_002342536 [Homo ...   345   2e-95
gi|239753992 PREDICTED: similar to TBP-associated factor 11 [Hom...   342   2e-94
gi|239748525 PREDICTED: similar to TBP-associated factor 11 [Hom...   342   2e-94
gi|239742502 PREDICTED: similar to TBP-associated factor 11 [Hom...   341   3e-94
gi|169167763 PREDICTED: similar to TBP-associated factor 11 [Hom...   316   9e-87
gi|88987389 PREDICTED: similar to TBP-associated factor 11 [Homo...   316   9e-87
gi|41147168 PREDICTED: similar to TBP-associated factor 11 [Homo...   316   9e-87
gi|5032151 TBP-associated factor 11 [Homo sapiens]                    221   3e-58
gi|32484979 adaptor-related protein complex 3, beta 1 subunit [H...    36   0.024
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]                       34   0.093
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]                       34   0.093

>gi|88987386 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  392 bits (1006), Expect = e-109
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH
Sbjct: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSNYKRVMF
Sbjct: 181 RLKPKGLFPNSNYKRVMF 198


>gi|51464888 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  392 bits (1006), Expect = e-109
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH
Sbjct: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSNYKRVMF
Sbjct: 181 RLKPKGLFPNSNYKRVMF 198


>gi|169167765 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  386 bits (992), Expect = e-108
 Identities = 196/198 (98%), Positives = 196/198 (98%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTKRKKE KPTVDAEEAQRMTTLLSAMSEEQLSRYEVCR SAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKRKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRWSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH
Sbjct: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSNYKRVMF
Sbjct: 181 RLKPKGLFPNSNYKRVMF 198


>gi|169167771 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  373 bits (958), Expect = e-104
 Identities = 188/198 (94%), Positives = 193/198 (97%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLE PRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTK KKE KPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           R+AGLMR+ITGSSVSENAAIAMAGIAK+FVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSN KR+MF
Sbjct: 181 RLKPKGLFPNSNCKRIMF 198


>gi|169167754 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  373 bits (958), Expect = e-104
 Identities = 188/198 (94%), Positives = 193/198 (97%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLE PRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTK KKE KPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           R+AGLMR+ITGSSVSENAAIAMAGIAK+FVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSN KR+MF
Sbjct: 181 RLKPKGLFPNSNCKRIMF 198


>gi|239748523 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  373 bits (958), Expect = e-104
 Identities = 188/198 (94%), Positives = 193/198 (97%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLE PRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTK KKE KPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           R+AGLMR+ITGSSVSENAAIAMAGIAK+FVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSN KR+MF
Sbjct: 181 RLKPKGLFPNSNCKRIMF 198


>gi|239742500 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  373 bits (958), Expect = e-104
 Identities = 188/198 (94%), Positives = 193/198 (97%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLE PRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTK KKE KPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           R+AGLMR+ITGSSVSENAAIAMAGIAK+FVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSN KR+MF
Sbjct: 181 RLKPKGLFPNSNCKRIMF 198


>gi|113416493 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  373 bits (958), Expect = e-104
 Identities = 188/198 (94%), Positives = 193/198 (97%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLE PRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTK KKE KPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           R+AGLMR+ITGSSVSENAAIAMAGIAK+FVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSN KR+MF
Sbjct: 181 RLKPKGLFPNSNCKRIMF 198


>gi|113416499 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  373 bits (958), Expect = e-104
 Identities = 188/198 (94%), Positives = 193/198 (97%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLE PRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTK KKE KPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           R+AGLMR+ITGSSVSENAAIAMAGIAK+FVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSN KR+MF
Sbjct: 181 RLKPKGLFPNSNCKRIMF 198


>gi|51464852 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  373 bits (958), Expect = e-104
 Identities = 188/198 (94%), Positives = 193/198 (97%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLE PRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTK KKE KPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           R+AGLMR+ITGSSVSENAAIAMAGIAK+FVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSN KR+MF
Sbjct: 181 RLKPKGLFPNSNCKRIMF 198


>gi|51464850 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  373 bits (958), Expect = e-104
 Identities = 188/198 (94%), Positives = 193/198 (97%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLE PRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTK KKE KPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           R+AGLMR+ITGSSVSENAAIAMAGIAK+FVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSN KR+MF
Sbjct: 181 RLKPKGLFPNSNCKRIMF 198


>gi|239742498 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  372 bits (955), Expect = e-103
 Identities = 187/198 (94%), Positives = 193/198 (97%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLE PRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTK KKE KPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           R+AGLMR+ITGSSVSENAAIAMAGIAK+FVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSN +R+MF
Sbjct: 181 RLKPKGLFPNSNCRRIMF 198


>gi|51464848 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  372 bits (955), Expect = e-103
 Identities = 187/198 (94%), Positives = 193/198 (97%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLE PRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTK KKE KPTVDAEEAQRMTTLLS+MSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSSMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           R+AGLMR+ITGSSVSENAAIAMAGIAK+FVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSN KR+MF
Sbjct: 181 RLKPKGLFPNSNCKRIMF 198


>gi|113416481 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  369 bits (948), Expect = e-103
 Identities = 187/198 (94%), Positives = 192/198 (96%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLE PRDQEGELRSEDVMDLTEGDSE
Sbjct: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEAPRDQEGELRSEDVMDLTEGDSE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKRRKTHTK KKE KPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA
Sbjct: 61  ASASAPPAAKRRKTHTKGKKESKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           R+AGLMR+ITGSSVSENAAIAMAGIAK+FVGEVVEEALD+CEMWGET PLQPKHLREAV 
Sbjct: 121 RVAGLMRAITGSSVSENAAIAMAGIAKLFVGEVVEEALDVCEMWGETLPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSN KR+MF
Sbjct: 181 RLKPKGLFPNSNCKRIMF 198


>gi|169167748 PREDICTED: similar to hCG1807616 [Homo sapiens]
          Length = 198

 Score =  352 bits (902), Expect = 2e-97
 Identities = 177/198 (89%), Positives = 184/198 (92%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQ GVSAEM AMPRGLKGS KDGIPEDLDGNLEEPRDQEGELRS+DVMDLTEGD E
Sbjct: 1   METGRQAGVSAEMFAMPRGLKGSNKDGIPEDLDGNLEEPRDQEGELRSQDVMDLTEGDKE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
            SASAPPAAKR KT TK KKERKPTVDAEEAQRMTTLLSAMSEEQL+RYEVCR+SAFP+A
Sbjct: 61  TSASAPPAAKRLKTDTKGKKERKPTVDAEEAQRMTTLLSAMSEEQLARYEVCRQSAFPKA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIA LM+SITGSSVSEN AIAMAGIAKV VGEVVEEALD+CEMWGE PPLQPKHLREAV 
Sbjct: 121 RIAALMQSITGSSVSENVAIAMAGIAKVLVGEVVEEALDVCEMWGEMPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSNYK+ MF
Sbjct: 181 RLKPKGLFPNSNYKKFMF 198


>gi|169168506 PREDICTED: similar to hCG1807616 [Homo sapiens]
          Length = 198

 Score =  352 bits (902), Expect = 2e-97
 Identities = 177/198 (89%), Positives = 184/198 (92%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQ GVSAEM AMPRGLKGS KDGIPEDLDGNLEEPRDQEGELRS+DVMDLTEGD E
Sbjct: 1   METGRQAGVSAEMFAMPRGLKGSNKDGIPEDLDGNLEEPRDQEGELRSQDVMDLTEGDKE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
            SASAPPAAKR KT TK KKERKPTVDAEEAQRMTTLLSAMSEEQL+RYEVCR+SAFP+A
Sbjct: 61  TSASAPPAAKRLKTDTKGKKERKPTVDAEEAQRMTTLLSAMSEEQLARYEVCRQSAFPKA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIA LM+SITGSSVSEN AIAMAGIAKV VGEVVEEALD+CEMWGE PPLQPKHLREAV 
Sbjct: 121 RIAALMQSITGSSVSENVAIAMAGIAKVLVGEVVEEALDVCEMWGEMPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSNYK+ MF
Sbjct: 181 RLKPKGLFPNSNYKKFMF 198


>gi|169167591 PREDICTED: hypothetical protein LOC285697 [Homo
           sapiens]
          Length = 198

 Score =  352 bits (902), Expect = 2e-97
 Identities = 177/198 (89%), Positives = 184/198 (92%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQ GVSAEM AMPRGLKGS KDGIPEDLDGNLEEPRDQEGELRS+DVMDLTEGD E
Sbjct: 1   METGRQAGVSAEMFAMPRGLKGSNKDGIPEDLDGNLEEPRDQEGELRSQDVMDLTEGDKE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
            SASAPPAAKR KT TK KKERKPTVDAEEAQRMTTLLSAMSEEQL+RYEVCR+SAFP+A
Sbjct: 61  TSASAPPAAKRLKTDTKGKKERKPTVDAEEAQRMTTLLSAMSEEQLARYEVCRQSAFPKA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIA LM+SITGSSVSEN AIAMAGIAKV VGEVVEEALD+CEMWGE PPLQPKHLREAV 
Sbjct: 121 RIAALMQSITGSSVSENVAIAMAGIAKVLVGEVVEEALDVCEMWGEMPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSNYK+ MF
Sbjct: 181 RLKPKGLFPNSNYKKFMF 198


>gi|169167767 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 197

 Score =  345 bits (884), Expect = 2e-95
 Identities = 175/198 (88%), Positives = 184/198 (92%), Gaps = 1/198 (0%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQ G SAEM AMP+GLKGS KDGIPEDLDGNLEEPRDQE ELRS+DVMDLTEGD+E
Sbjct: 1   METGRQRGASAEMFAMPQGLKGSNKDGIPEDLDGNLEEPRDQESELRSQDVMDLTEGDNE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKR+KT TK KKERKPTVDAEEAQ MTTLL AMSEEQLSRYEVCRRSAFP+A
Sbjct: 61  ASASAPPAAKRQKTDTKGKKERKPTVDAEEAQ-MTTLLYAMSEEQLSRYEVCRRSAFPKA 119

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIA LM+SITG SVSEN AIAMAGIAKV VGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 120 RIAALMQSITGRSVSENTAIAMAGIAKVLVGEVVEEALDVCEMWGETPPLQPKHLREAVR 179

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSNYK++MF
Sbjct: 180 RLKPKGLFPNSNYKKIMF 197


>gi|169167869 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 197

 Score =  345 bits (884), Expect = 2e-95
 Identities = 175/198 (88%), Positives = 184/198 (92%), Gaps = 1/198 (0%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQ G SAEM AMP+GLKGS KDGIPEDLDGNLEEPRDQE ELRS+DVMDLTEGD+E
Sbjct: 1   METGRQRGASAEMFAMPQGLKGSNKDGIPEDLDGNLEEPRDQESELRSQDVMDLTEGDNE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKR+KT TK KKERKPTVDAEEAQ MTTLL AMSEEQLSRYEVCRRSAFP+A
Sbjct: 61  ASASAPPAAKRQKTDTKGKKERKPTVDAEEAQ-MTTLLYAMSEEQLSRYEVCRRSAFPKA 119

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIA LM+SITG SVSEN AIAMAGIAKV VGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 120 RIAALMQSITGRSVSENTAIAMAGIAKVLVGEVVEEALDVCEMWGETPPLQPKHLREAVR 179

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSNYK++MF
Sbjct: 180 RLKPKGLFPNSNYKKIMF 197


>gi|239742504 PREDICTED: hypothetical protein XP_002342536 [Homo
           sapiens]
          Length = 197

 Score =  345 bits (884), Expect = 2e-95
 Identities = 175/198 (88%), Positives = 184/198 (92%), Gaps = 1/198 (0%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQ G SAEM AMP+GLKGS KDGIPEDLDGNLEEPRDQE ELRS+DVMDLTEGD+E
Sbjct: 1   METGRQRGASAEMFAMPQGLKGSNKDGIPEDLDGNLEEPRDQESELRSQDVMDLTEGDNE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKR+KT TK KKERKPTVDAEEAQ MTTLL AMSEEQLSRYEVCRRSAFP+A
Sbjct: 61  ASASAPPAAKRQKTDTKGKKERKPTVDAEEAQ-MTTLLYAMSEEQLSRYEVCRRSAFPKA 119

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIA LM+SITG SVSEN AIAMAGIAKV VGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 120 RIAALMQSITGRSVSENTAIAMAGIAKVLVGEVVEEALDVCEMWGETPPLQPKHLREAVR 179

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPNSNYK++MF
Sbjct: 180 RLKPKGLFPNSNYKKIMF 197


>gi|239753992 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  342 bits (876), Expect = 2e-94
 Identities = 171/198 (86%), Positives = 181/198 (91%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQ   SAEM  MPRGLK S KDGIPEDLDGNLEEPRDQE ELRS+DVMDLTEGD+E
Sbjct: 1   METGRQRDASAEMFPMPRGLKYSNKDGIPEDLDGNLEEPRDQESELRSQDVMDLTEGDNE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASAS PP+AKR+KT TK KKERKPT+DAEEAQRMTTL SAMSEEQLSRYEVCRRSAFP+A
Sbjct: 61  ASASTPPSAKRQKTDTKGKKERKPTMDAEEAQRMTTLFSAMSEEQLSRYEVCRRSAFPKA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIA LM+SITG SVSEN AIAMAGIAKVFVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RIAALMQSITGRSVSENTAIAMAGIAKVFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGL PNSNYK++MF
Sbjct: 181 RLKPKGLLPNSNYKKIMF 198


>gi|239748525 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  342 bits (876), Expect = 2e-94
 Identities = 171/198 (86%), Positives = 181/198 (91%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQ   SAEM  MPRGLK S KDGIPEDLDGNLEEPRDQE ELRS+DVMDLTEGD+E
Sbjct: 1   METGRQRDASAEMFPMPRGLKYSNKDGIPEDLDGNLEEPRDQESELRSQDVMDLTEGDNE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASAS PP+AKR+KT TK KKERKPT+DAEEAQRMTTL SAMSEEQLSRYEVCRRSAFP+A
Sbjct: 61  ASASTPPSAKRQKTDTKGKKERKPTMDAEEAQRMTTLFSAMSEEQLSRYEVCRRSAFPKA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIA LM+SITG SVSEN AIAMAGIAKVFVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RIAALMQSITGRSVSENTAIAMAGIAKVFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGL PNSNYK++MF
Sbjct: 181 RLKPKGLLPNSNYKKIMF 198


>gi|239742502 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 198

 Score =  341 bits (874), Expect = 3e-94
 Identities = 170/198 (85%), Positives = 181/198 (91%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQ   SAEM  MPRGLK S KDGIPEDLDGNLEEPRDQE ELRS+DVMDLTEGD+E
Sbjct: 1   METGRQRDASAEMFPMPRGLKYSNKDGIPEDLDGNLEEPRDQESELRSQDVMDLTEGDNE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASAS PP+AKR+KT TK KKERKPT+DAEEAQRMTTL SAMSEEQLSRYEVCRRSAFP+A
Sbjct: 61  ASASTPPSAKRQKTDTKGKKERKPTMDAEEAQRMTTLFSAMSEEQLSRYEVCRRSAFPKA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           RIA LM+SITG SVSEN AIAMAGIAKVFVGEVVEEALD+CEMWGETPPLQPKHLREAV 
Sbjct: 121 RIAALMQSITGRSVSENTAIAMAGIAKVFVGEVVEEALDVCEMWGETPPLQPKHLREAVR 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKG+ PNSNYK++MF
Sbjct: 181 RLKPKGILPNSNYKKIMF 198


>gi|169167763 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 197

 Score =  316 bits (809), Expect = 9e-87
 Identities = 166/198 (83%), Positives = 176/198 (88%), Gaps = 1/198 (0%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEM A+PRGLKG  +DGIPE LDGNLEEPR QE ELRSEDVMDLT  D+E
Sbjct: 1   METGRQTGVSAEMFAIPRGLKGCNEDGIPEALDGNLEEPRAQECELRSEDVMDLTVVDNE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKR+KT TK +KERKP+VDAEEAQRMTTLLSAMSEEQLSRYEVCR+ AFP+A
Sbjct: 61  ASASAPPAAKRQKTDTKGQKERKPSVDAEEAQRMTTLLSAMSEEQLSRYEVCRQLAFPKA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
            +A LM SITG SV EN AIAMAGIAKVFVGEVVEEALDMCEMWGE PPLQP  LREAV 
Sbjct: 121 LVARLMWSITGRSVPENMAIAMAGIAKVFVGEVVEEALDMCEMWGEMPPLQPMDLREAVC 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPN NYK+VMF
Sbjct: 181 RLKPKGLFPN-NYKKVMF 197


>gi|88987389 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 197

 Score =  316 bits (809), Expect = 9e-87
 Identities = 166/198 (83%), Positives = 176/198 (88%), Gaps = 1/198 (0%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEM A+PRGLKG  +DGIPE LDGNLEEPR QE ELRSEDVMDLT  D+E
Sbjct: 1   METGRQTGVSAEMFAIPRGLKGCNEDGIPEALDGNLEEPRAQECELRSEDVMDLTVVDNE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKR+KT TK +KERKP+VDAEEAQRMTTLLSAMSEEQLSRYEVCR+ AFP+A
Sbjct: 61  ASASAPPAAKRQKTDTKGQKERKPSVDAEEAQRMTTLLSAMSEEQLSRYEVCRQLAFPKA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
            +A LM SITG SV EN AIAMAGIAKVFVGEVVEEALDMCEMWGE PPLQP  LREAV 
Sbjct: 121 LVARLMWSITGRSVPENMAIAMAGIAKVFVGEVVEEALDMCEMWGEMPPLQPMDLREAVC 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPN NYK+VMF
Sbjct: 181 RLKPKGLFPN-NYKKVMF 197


>gi|41147168 PREDICTED: similar to TBP-associated factor 11 [Homo
           sapiens]
          Length = 197

 Score =  316 bits (809), Expect = 9e-87
 Identities = 166/198 (83%), Positives = 176/198 (88%), Gaps = 1/198 (0%)

Query: 1   METGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSE 60
           METGRQTGVSAEM A+PRGLKG  +DGIPE LDGNLEEPR QE ELRSEDVMDLT  D+E
Sbjct: 1   METGRQTGVSAEMFAIPRGLKGCNEDGIPEALDGNLEEPRAQECELRSEDVMDLTVVDNE 60

Query: 61  ASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRA 120
           ASASAPPAAKR+KT TK +KERKP+VDAEEAQRMTTLLSAMSEEQLSRYEVCR+ AFP+A
Sbjct: 61  ASASAPPAAKRQKTDTKGQKERKPSVDAEEAQRMTTLLSAMSEEQLSRYEVCRQLAFPKA 120

Query: 121 RIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
            +A LM SITG SV EN AIAMAGIAKVFVGEVVEEALDMCEMWGE PPLQP  LREAV 
Sbjct: 121 LVARLMWSITGRSVPENMAIAMAGIAKVFVGEVVEEALDMCEMWGEMPPLQPMDLREAVC 180

Query: 181 RLKPKGLFPNSNYKRVMF 198
           RLKPKGLFPN NYK+VMF
Sbjct: 181 RLKPKGLFPN-NYKKVMF 197


>gi|5032151 TBP-associated factor 11 [Homo sapiens]
          Length = 211

 Score =  221 bits (563), Expect = 3e-58
 Identities = 115/201 (57%), Positives = 147/201 (73%), Gaps = 4/201 (1%)

Query: 2   ETGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGN----LEEPRDQEGELRSEDVMDLTEG 57
           + G +TG S E  A+P     +  DGIPE+ DG+    L+E   +EGEL S+DV DLT  
Sbjct: 10  DKGGETGESDETAAVPGDPGATDTDGIPEETDGDADVDLKEAAAEEGELESQDVSDLTTV 69

Query: 58  DSEASASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAF 117
           + E S+   PAAK+ K  TK KKE+K  VD +E Q+M  L+S+ SEEQL+RYE+ RRSAF
Sbjct: 70  EREDSSLLNPAAKKLKIDTKEKKEKKQKVDEDEIQKMQILVSSFSEEQLNRYEMYRRSAF 129

Query: 118 PRARIAGLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLRE 177
           P+A I  L++SITG+SVS+N  IAM+GI+KVFVGEVVEEALD+CE WGE PPLQPKH+RE
Sbjct: 130 PKAAIKRLIQSITGTSVSQNVVIAMSGISKVFVGEVVEEALDVCEKWGEMPPLQPKHMRE 189

Query: 178 AVHRLKPKGLFPNSNYKRVMF 198
           AV RLK KG  PNS +K+++F
Sbjct: 190 AVRRLKSKGQIPNSKHKKIIF 210


>gi|32484979 adaptor-related protein complex 3, beta 1 subunit [Homo
           sapiens]
          Length = 1094

 Score = 35.8 bits (81), Expect = 0.024
 Identities = 34/187 (18%), Positives = 71/187 (37%), Gaps = 32/187 (17%)

Query: 2   ETGRQTGVSAEMLAMPRGLKGSKKDGIPEDLDGNLEEPRDQEGELRSEDVMDLTEGDSEA 61
           E+GR++G+  +  A     + SK  G  +  DG  E  + +  +  +++   + +  S++
Sbjct: 727 ESGRESGLENKRTAK----RNSKAKGKSDSEDGEKENEKSKTSDSSNDESSSIEDSSSDS 782

Query: 62  SASAPPAAKRRKTHTKRKKERKPTVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSAFPRAR 121
            + + P ++       ++KE+K   D     +  +LL       +S        A P   
Sbjct: 783 ESESEPESESESRRVTKEKEKKTKQDRTPLTKDVSLLDLDDFNPVS-----TPVALPTPA 837

Query: 122 IA-GLMRSITGSSVSENAAIAMAGIAKVFVGEVVEEALDMCEMWGETPPLQPKHLREAVH 180
           ++  LM  + G  +S ++++                          TP   P      +H
Sbjct: 838 LSPSLMADLEGLHLSTSSSVISV----------------------STPAFVPTKTHVLLH 875

Query: 181 RLKPKGL 187
           R+  KGL
Sbjct: 876 RMSGKGL 882


>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
          Length = 532

 Score = 33.9 bits (76), Expect = 0.093
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 4/92 (4%)

Query: 26  DGIPEDLDGN-LEEPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKRKKERKP 84
           +G P+   G  LEE R + GE  SE+   L +   EA+       K+R+   K  +E + 
Sbjct: 264 EGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQ 323

Query: 85  TVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSA 116
               EEA R    L    E++  + E+ RR A
Sbjct: 324 RRKQEEADRK---LREEEEKRRLKEEIERRRA 352


>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
          Length = 558

 Score = 33.9 bits (76), Expect = 0.093
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 4/92 (4%)

Query: 26  DGIPEDLDGN-LEEPRDQEGELRSEDVMDLTEGDSEASASAPPAAKRRKTHTKRKKERKP 84
           +G P+   G  LEE R + GE  SE+   L +   EA+       K+R+   K  +E + 
Sbjct: 290 EGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQ 349

Query: 85  TVDAEEAQRMTTLLSAMSEEQLSRYEVCRRSA 116
               EEA R    L    E++  + E+ RR A
Sbjct: 350 RRKQEEADRK---LREEEEKRRLKEEIERRRA 378


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.128    0.356 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,598,008
Number of Sequences: 37866
Number of extensions: 331828
Number of successful extensions: 1619
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 1484
Number of HSP's gapped (non-prelim): 202
length of query: 198
length of database: 18,247,518
effective HSP length: 97
effective length of query: 101
effective length of database: 14,574,516
effective search space: 1472026116
effective search space used: 1472026116
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.