Guide to the Human Genome
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Name: GANAB Sequence: fasta or formatted (966aa) NCBI GI: 88900491
Description:

neutral alpha-glucosidase AB isoform 3

Referenced in:

Protein Glycosylation
Hexokinases and Initial Sugar Metabolism

Other entries for this name:
alt prot [944aa] neutral alpha-glucosidase AB isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         59           2
 C cysteine            0.8          8           1
 D aspartate           6.6         64           2
 E glutamate           5.7         55           2
 F phenylalanine       4.5         43           2
 G glycine             7.9         76           2
 H histidine           3.1         30           2
 I isoleucine          3.7         36           2
 K lysine              3.1         30           1
 L leucine            10.8        104           3
 M methionine          2.2         21           2
 N asparagine          3.1         30           1
 P proline             6.6         64           2
 Q glutamine           4.0         39           1
 R arginine            7.0         68           4
 S serine              6.9         67           3
 T threonine           4.7         45           2
 V valine              6.8         66           2
 W tryptophan          2.6         25           2
 Y tyrosine            3.7         36           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neutral alpha-glucosidase AB isoform 3 
GANAB                 0.971   neutral alpha-glucosidase AB isoform 2 
GANC                  0.469   glucosidase, alpha; neutral C 
GAA                   0.153   acid alpha-glucosidase preproprotein 
GAA                   0.153   acid alpha-glucosidase preproprotein 
GAA                   0.153   acid alpha-glucosidase preproprotein 
MGAM                  0.130   maltase-glucoamylase 
SI                    0.128   sucrase-isomaltase 
LOC642103             0.115   PREDICTED: similar to sucrase-isomaltase 
KIAA1161              0.026   hypothetical protein LOC57462 
ATP13A2               0.004   ATPase type 13A2 isoform 2 
ATP13A2               0.004   ATPase type 13A2 isoform 1 
CAPRIN2               0.004   C1q domain containing 1 isoform 1 
CAPRIN2               0.004   C1q domain containing 1 isoform 3 
CAPRIN2               0.004   C1q domain containing 1 isoform 2 
SPTB                  0.003   spectrin beta isoform a 
ATP13A2               0.003   ATPase type 13A2 isoform 3 
DNMT3A                0.003   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
DNMT3A                0.003   DNA cytosine methyltransferase 3 alpha isoform c [Ho...
DNMT3A                0.003   DNA cytosine methyltransferase 3 alpha isoform a [Ho...
CACNA1B               0.003   calcium channel, voltage-dependent, N type, alpha 1B ...
KRBA2                 0.003   KRAB-A domain containing 2 
KIF21B                0.003   kinesin family member 21B 
C19orf29              0.003   chromosome 19 open reading frame 29 
C19orf29              0.003   chromosome 19 open reading frame 29 
RGAG4                 0.003   retrotransposon gag domain containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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