Guide to the Human Genome
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Name: GANC Sequence: fasta or formatted (914aa) NCBI GI: 66346737
Description:

glucosidase, alpha; neutral C

Referenced in:

Hexokinases and Initial Sugar Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         47           2
 C cysteine            1.1         10           1
 D aspartate           5.6         51           2
 E glutamate           7.4         68           3
 F phenylalanine       5.3         48           2
 G glycine             7.0         64           2
 H histidine           3.4         31           2
 I isoleucine          5.7         52           2
 K lysine              6.3         58           2
 L leucine             8.8         80           2
 M methionine          1.8         16           1
 N asparagine          3.4         31           1
 P proline             4.7         43           2
 Q glutamine           3.8         35           1
 R arginine            4.3         39           2
 S serine              7.4         68           2
 T threonine           5.9         54           2
 V valine              6.3         58           2
 W tryptophan          2.3         21           1
 Y tyrosine            4.4         40           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glucosidase, alpha; neutral C 
GANAB                 0.502   neutral alpha-glucosidase AB isoform 2 
GANAB                 0.498   neutral alpha-glucosidase AB isoform 3 
GAA                   0.166   acid alpha-glucosidase preproprotein 
GAA                   0.166   acid alpha-glucosidase preproprotein 
GAA                   0.166   acid alpha-glucosidase preproprotein 
SI                    0.147   sucrase-isomaltase 
MGAM                  0.138   maltase-glucoamylase 
LOC642103             0.120   PREDICTED: similar to sucrase-isomaltase 
KIAA1161              0.031   hypothetical protein LOC57462 
ROBO2                 0.004   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.004   roundabout, axon guidance receptor, homolog 2 isofor...
SYT1                  0.004   synaptotagmin I 
SYT1                  0.004   synaptotagmin I 
SYT1                  0.004   synaptotagmin I 
TSNARE1               0.003   t-SNARE domain containing 1 
METT5D1               0.003   methyltransferase 5 domain containing 1 isoform 1 [...
METT5D1               0.003   methyltransferase 5 domain containing 1 isoform 2 [...
CPNE3                 0.003   copine III 
XIRP2                 0.003   xin actin-binding repeat containing 2 isoform 1 [Ho...
XIRP2                 0.003   xin actin-binding repeat containing 2 isoform 2 [Ho...
BDP1                  0.003   transcription factor-like nuclear regulator 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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