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Search of human proteins with 82830440
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|82830440 Fanconi anemia, complementation group I isoform 2
[Homo sapiens]
(1268 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|82830440 Fanconi anemia, complementation group I isoform 2 [H... 2453 0.0
gi|164607124 Fanconi anemia, complementation group I isoform 1 [... 2262 0.0
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 39 0.024
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens] 39 0.024
gi|217272804 hyaluronan-mediated motility receptor isoform d [Ho... 39 0.024
gi|217272802 hyaluronan-mediated motility receptor isoform a [Ho... 39 0.024
gi|217416398 hyaluronan-mediated motility receptor isoform c [Ho... 39 0.024
gi|217416394 hyaluronan-mediated motility receptor isoform b [Ho... 39 0.024
gi|66528888 Fanconi anemia complementation group D2 isoform b [H... 39 0.032
gi|21361861 Fanconi anemia complementation group D2 isoform a [H... 39 0.032
gi|55770834 centromere protein F [Homo sapiens] 34 0.78
gi|4508005 tripartite motif-containing 26 [Homo sapiens] 33 1.3
gi|7662316 HIV-1 Vpr binding protein [Homo sapiens] 33 1.7
gi|39995064 pannexin 1 [Homo sapiens] 33 1.7
gi|156104869 chloride channel 2 [Homo sapiens] 33 2.3
gi|226246630 tryptophan rich basic protein isoform 2 [Homo sapiens] 33 2.3
gi|21536428 tryptophan rich basic protein isoform 1 [Homo sapiens] 33 2.3
gi|65287717 eukaryotic translation initiation factor 2 alpha kin... 33 2.3
gi|189217904 RPGRIP1-like isoform b [Homo sapiens] 32 3.0
gi|118442834 RPGRIP1-like isoform a [Homo sapiens] 32 3.0
gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens] 32 3.9
gi|27597090 suppressor of Ty 6 homolog [Homo sapiens] 32 3.9
gi|153070822 methylmalonic aciduria (cobalamin deficiency) cblC ... 31 6.6
gi|117414135 apoptosis inhibitor [Homo sapiens] 31 6.6
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 31 8.6
gi|215422388 death-domain associated protein isoform a [Homo sap... 31 8.6
gi|215422366 death-domain associated protein isoform b [Homo sap... 31 8.6
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 31 8.6
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 31 8.6
gi|23957698 luman-recruiting factor [Homo sapiens] 31 8.6
>gi|82830440 Fanconi anemia, complementation group I isoform 2 [Homo
sapiens]
Length = 1268
Score = 2453 bits (6357), Expect = 0.0
Identities = 1268/1268 (100%), Positives = 1268/1268 (100%)
Query: 1 MDQKILSLAAEKTADKLQEFLQTLREGDLTNLLQNQAVKGKVAGALLRAIFKGSPCSEEA 60
MDQKILSLAAEKTADKLQEFLQTLREGDLTNLLQNQAVKGKVAGALLRAIFKGSPCSEEA
Sbjct: 1 MDQKILSLAAEKTADKLQEFLQTLREGDLTNLLQNQAVKGKVAGALLRAIFKGSPCSEEA 60
Query: 61 GTLRRRKIYTCCIQLVESGDLQKEIASEIIGLLMLEAHHFPGPLLVELANEFISAVREGS 120
GTLRRRKIYTCCIQLVESGDLQKEIASEIIGLLMLEAHHFPGPLLVELANEFISAVREGS
Sbjct: 61 GTLRRRKIYTCCIQLVESGDLQKEIASEIIGLLMLEAHHFPGPLLVELANEFISAVREGS 120
Query: 121 LVNGKSLELLPIILTALATKKENLAYGKGVLSGEECKKQLINTLCSGRWDQQYVIQLTSM 180
LVNGKSLELLPIILTALATKKENLAYGKGVLSGEECKKQLINTLCSGRWDQQYVIQLTSM
Sbjct: 121 LVNGKSLELLPIILTALATKKENLAYGKGVLSGEECKKQLINTLCSGRWDQQYVIQLTSM 180
Query: 181 FKDVPLTAEEVEFVVEKALSMFSKMNLQEIPPLVYQLLVLSSKGSRKSVLEGIIAFFSAL 240
FKDVPLTAEEVEFVVEKALSMFSKMNLQEIPPLVYQLLVLSSKGSRKSVLEGIIAFFSAL
Sbjct: 181 FKDVPLTAEEVEFVVEKALSMFSKMNLQEIPPLVYQLLVLSSKGSRKSVLEGIIAFFSAL 240
Query: 241 DKQHNEEQSGDELLDVVTVPSGELRHVEGTIILHIVFAIKLDYELGRELVKHLKVGQQGD 300
DKQHNEEQSGDELLDVVTVPSGELRHVEGTIILHIVFAIKLDYELGRELVKHLKVGQQGD
Sbjct: 241 DKQHNEEQSGDELLDVVTVPSGELRHVEGTIILHIVFAIKLDYELGRELVKHLKVGQQGD 300
Query: 301 SNNNLSPFSIALLLSVTRIQRFQDQVLDLLKTSVVKSFKDLQLLQGSKFLQNLVPHRSYV 360
SNNNLSPFSIALLLSVTRIQRFQDQVLDLLKTSVVKSFKDLQLLQGSKFLQNLVPHRSYV
Sbjct: 301 SNNNLSPFSIALLLSVTRIQRFQDQVLDLLKTSVVKSFKDLQLLQGSKFLQNLVPHRSYV 360
Query: 361 STMILEVVKNSVHSWDHVTQGLVELGFILMDSYGPKKVLDGKTIETSPSLSRMPNQHACK 420
STMILEVVKNSVHSWDHVTQGLVELGFILMDSYGPKKVLDGKTIETSPSLSRMPNQHACK
Sbjct: 361 STMILEVVKNSVHSWDHVTQGLVELGFILMDSYGPKKVLDGKTIETSPSLSRMPNQHACK 420
Query: 421 LGANILLETFKIHEMIRQEILEQVLNRVVTRASSPISHFLDLLSNIVMYAPLVLQSCSSK 480
LGANILLETFKIHEMIRQEILEQVLNRVVTRASSPISHFLDLLSNIVMYAPLVLQSCSSK
Sbjct: 421 LGANILLETFKIHEMIRQEILEQVLNRVVTRASSPISHFLDLLSNIVMYAPLVLQSCSSK 480
Query: 481 VTEAFDYLSFLPLQTVQRLLKAVQPLLKVSMSMRDCLILVLRKAMFANQLDARKSAVAGF 540
VTEAFDYLSFLPLQTVQRLLKAVQPLLKVSMSMRDCLILVLRKAMFANQLDARKSAVAGF
Sbjct: 481 VTEAFDYLSFLPLQTVQRLLKAVQPLLKVSMSMRDCLILVLRKAMFANQLDARKSAVAGF 540
Query: 541 LLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNSVANETFCLEIMDSLRRCLSQQAD 600
LLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNSVANETFCLEIMDSLRRCLSQQAD
Sbjct: 541 LLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNSVANETFCLEIMDSLRRCLSQQAD 600
Query: 601 VRLMLYEGFYDVLRRNSQLANSVMQTLLSQLKQFYEPKPDLLPPLKLEACILTQGDKISL 660
VRLMLYEGFYDVLRRNSQLANSVMQTLLSQLKQFYEPKPDLLPPLKLEACILTQGDKISL
Sbjct: 601 VRLMLYEGFYDVLRRNSQLANSVMQTLLSQLKQFYEPKPDLLPPLKLEACILTQGDKISL 660
Query: 661 QEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEEEEAFYEDLDDILESITNRMIKSELED 720
QEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEEEEAFYEDLDDILESITNRMIKSELED
Sbjct: 661 QEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEEEEAFYEDLDDILESITNRMIKSELED 720
Query: 721 FELDKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILSLFMCYKK 780
FELDKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILSLFMCYKK
Sbjct: 721 FELDKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILSLFMCYKK 780
Query: 781 LSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLLTALFRVLLWRYTSIPTSVEESGKKEK 840
LSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLLTALFRVLLWRYTSIPTSVEESGKKEK
Sbjct: 781 LSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLLTALFRVLLWRYTSIPTSVEESGKKEK 840
Query: 841 GKSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEEREDADVSVTQRTAFQIR 900
GKSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEEREDADVSVTQRTAFQIR
Sbjct: 841 GKSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEEREDADVSVTQRTAFQIR 900
Query: 901 QFQRSLLNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKICKENSRE 960
QFQRSLLNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKICKENSRE
Sbjct: 901 QFQRSLLNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKICKENSRE 960
Query: 961 DALFCKSLMNLLFSLHVSYKSPVILLRDLSQDIHGHLGDIDQDVEVEKTNHFAIVNLRTA 1020
DALFCKSLMNLLFSLHVSYKSPVILLRDLSQDIHGHLGDIDQDVEVEKTNHFAIVNLRTA
Sbjct: 961 DALFCKSLMNLLFSLHVSYKSPVILLRDLSQDIHGHLGDIDQDVEVEKTNHFAIVNLRTA 1020
Query: 1021 APTVCLLVLSQAEKVLEEVDWLITKLKGQVSQETLSEEASSQATLPNQPVEKAIIMQLGT 1080
APTVCLLVLSQAEKVLEEVDWLITKLKGQVSQETLSEEASSQATLPNQPVEKAIIMQLGT
Sbjct: 1021 APTVCLLVLSQAEKVLEEVDWLITKLKGQVSQETLSEEASSQATLPNQPVEKAIIMQLGT 1080
Query: 1081 LLTFFHELVQTALPSGSCVDTLLKDLCKMYTTLTALVRYYLQVCQSSGGIPKNMEKLVKL 1140
LLTFFHELVQTALPSGSCVDTLLKDLCKMYTTLTALVRYYLQVCQSSGGIPKNMEKLVKL
Sbjct: 1081 LLTFFHELVQTALPSGSCVDTLLKDLCKMYTTLTALVRYYLQVCQSSGGIPKNMEKLVKL 1140
Query: 1141 SGSHLTPLCYSFISYVQNKSKSLNYTGEKKEKPAAVATAMARVLRETKPIPNLIFAIEQY 1200
SGSHLTPLCYSFISYVQNKSKSLNYTGEKKEKPAAVATAMARVLRETKPIPNLIFAIEQY
Sbjct: 1141 SGSHLTPLCYSFISYVQNKSKSLNYTGEKKEKPAAVATAMARVLRETKPIPNLIFAIEQY 1200
Query: 1201 EKFLIHLSKKSKVNLMQHMKLSTSRDFKIKGNILDMVLREDGEDENEEGTASEHGGQNKE 1260
EKFLIHLSKKSKVNLMQHMKLSTSRDFKIKGNILDMVLREDGEDENEEGTASEHGGQNKE
Sbjct: 1201 EKFLIHLSKKSKVNLMQHMKLSTSRDFKIKGNILDMVLREDGEDENEEGTASEHGGQNKE 1260
Query: 1261 PAKKKRKK 1268
PAKKKRKK
Sbjct: 1261 PAKKKRKK 1268
>gi|164607124 Fanconi anemia, complementation group I isoform 1 [Homo
sapiens]
Length = 1328
Score = 2262 bits (5861), Expect = 0.0
Identities = 1198/1329 (90%), Positives = 1220/1329 (91%), Gaps = 62/1329 (4%)
Query: 1 MDQKILSLAAEKTADKLQEFLQTLREGDLTNLLQNQAVKGKVAGALLRAIFKGSPCSEEA 60
MDQKILSLAAEKTADKLQEFLQTLREGDLTNLLQNQAVKGKVAGALLRAIFKGSPCSEEA
Sbjct: 1 MDQKILSLAAEKTADKLQEFLQTLREGDLTNLLQNQAVKGKVAGALLRAIFKGSPCSEEA 60
Query: 61 GTLRRRKIYTCCIQLVESGDLQKEIASEIIGLLMLEAHHFPGPLLVELANEFISAVREGS 120
GTLRRRKIYTCCIQLVESGDLQKEIASEIIGLLMLEAHHFPGPLLVELANEFISAVREGS
Sbjct: 61 GTLRRRKIYTCCIQLVESGDLQKEIASEIIGLLMLEAHHFPGPLLVELANEFISAVREGS 120
Query: 121 LVNGKSLELLPIILTALATKKENLAYGKGVLSGEECKKQLINTLCSGRWDQQYVIQLTSM 180
LVNGKSLELLPIILTALATKKENLAYGKGVLSGEECKKQLINTLCSGRWDQQYVIQLTSM
Sbjct: 121 LVNGKSLELLPIILTALATKKENLAYGKGVLSGEECKKQLINTLCSGRWDQQYVIQLTSM 180
Query: 181 FKDVPLTAEEVEFVVEKALSMFSKMNLQEIPPLVYQLLVLSSKGSRKSVLEGIIAFFSAL 240
FKDVPLTAEEVEFVVEKALSMFSKMNLQEIPPLVYQLLVLSSKGSRKSVLEGIIAFFSAL
Sbjct: 181 FKDVPLTAEEVEFVVEKALSMFSKMNLQEIPPLVYQLLVLSSKGSRKSVLEGIIAFFSAL 240
Query: 241 DKQHNEEQSGDELLDVVTVPSGELRHVEGTIILHIVFAIKLDYELGRELVKHLKVGQQGD 300
DKQHNEEQSGDELLDVVTVPSGELRHVEGTIILHIVFAIKLDYELGRELVKHLKVGQQGD
Sbjct: 241 DKQHNEEQSGDELLDVVTVPSGELRHVEGTIILHIVFAIKLDYELGRELVKHLKVGQQGD 300
Query: 301 SNNNLSPFSIALLLSVTRIQRFQDQVLDLLKTSVVKSFKDLQLLQGSKFLQNLVPHRSYV 360
SNNNLSPFSIALLLSVTRIQRFQDQVLDLLKTSVVKSFKDLQLLQGSKFLQNLVPHRSYV
Sbjct: 301 SNNNLSPFSIALLLSVTRIQRFQDQVLDLLKTSVVKSFKDLQLLQGSKFLQNLVPHRSYV 360
Query: 361 STMILEVVKNSVHSWDHVTQGLVELGFILMDSYGPKKVLDGKTIETSPSLSRMPNQHACK 420
STMILEVVKNSVHSWDHVTQGLVELGFILMDSYGPKKVLDGKTIETSPSLSRMPNQHACK
Sbjct: 361 STMILEVVKNSVHSWDHVTQGLVELGFILMDSYGPKKVLDGKTIETSPSLSRMPNQHACK 420
Query: 421 LGANILLETFKIHEMIRQEILEQVLNRVVTRASSPISHFLDLLSNIVMYAPLVLQSCSSK 480
LGANILLETFKIHEMIRQEILEQVLNRVVTRASSPISHFLDLLSNIVMYAPLVLQSCSSK
Sbjct: 421 LGANILLETFKIHEMIRQEILEQVLNRVVTRASSPISHFLDLLSNIVMYAPLVLQSCSSK 480
Query: 481 VTEAFDYLSFLPLQTVQRLLKAVQPLLKVSMSMRDCLILVLRKAMFANQLDARKSAVAGF 540
VTEAFDYLSFLPLQTVQRLLKAVQPLLKVSMSMRDCLILVLRKAMFANQLDARKSAVAGF
Sbjct: 481 VTEAFDYLSFLPLQTVQRLLKAVQPLLKVSMSMRDCLILVLRKAMFANQLDARKSAVAGF 540
Query: 541 LLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNSVANETFCLEIMDSLRRCLSQQAD 600
LLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNSVANETFCLEIMDSLRRCLSQQAD
Sbjct: 541 LLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNSVANETFCLEIMDSLRRCLSQQAD 600
Query: 601 VRLMLYEGFYDVLRRNSQLANSVMQTLLSQLKQFYEPKPDLLPPLKLEACILTQGDKISL 660
VRLMLYEGFYDVLRRNSQLANSVMQTLLSQLKQFYEPKPDLLPPLKLEACILTQGDKISL
Sbjct: 601 VRLMLYEGFYDVLRRNSQLANSVMQTLLSQLKQFYEPKPDLLPPLKLEACILTQGDKISL 660
Query: 661 QEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEEEEAFYEDLDDILESITNRMIKSELED 720
QEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEEEEAFYEDLDDILESITNRMIKSELED
Sbjct: 661 QEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEEEEAFYEDLDDILESITNRMIKSELED 720
Query: 721 FELDKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILSLFMCYKK 780
FELDKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILSLFMCYKK
Sbjct: 721 FELDKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILSLFMCYKK 780
Query: 781 LSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLLTALFRVLLWRYTSIPTSVEESGK--- 837
LSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLLTALFR + + + + S +
Sbjct: 781 LSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLLTALFRDSIQSHQESLSVLRSSNEFMR 840
Query: 838 -------------KEKGKSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEER 884
KE G +S + +KIF + + + ++ ++ G++
Sbjct: 841 YAVNVALQKVQQLKETG-HVSGPDGQNPEKIFQNLCDITRVLLWRYTSIPTSVEESGKKE 899
Query: 885 EDADVS-------------VTQRTAFQIRQFQRSL------------------------- 906
+ +S V Q +I+QF R+L
Sbjct: 900 KGKSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEEREDADVSVTQRTAFQI 959
Query: 907 -------LNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKICKENSR 959
LNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKICKENSR
Sbjct: 960 RQFQRSLLNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKICKENSR 1019
Query: 960 EDALFCKSLMNLLFSLHVSYKSPVILLRDLSQDIHGHLGDIDQDVEVEKTNHFAIVNLRT 1019
EDALFCKSLMNLLFSLHVSYKSPVILLRDLSQDIHGHLGDIDQDVEVEKTNHFAIVNLRT
Sbjct: 1020 EDALFCKSLMNLLFSLHVSYKSPVILLRDLSQDIHGHLGDIDQDVEVEKTNHFAIVNLRT 1079
Query: 1020 AAPTVCLLVLSQAEKVLEEVDWLITKLKGQVSQETLSEEASSQATLPNQPVEKAIIMQLG 1079
AAPTVCLLVLSQAEKVLEEVDWLITKLKGQVSQETLSEEASSQATLPNQPVEKAIIMQLG
Sbjct: 1080 AAPTVCLLVLSQAEKVLEEVDWLITKLKGQVSQETLSEEASSQATLPNQPVEKAIIMQLG 1139
Query: 1080 TLLTFFHELVQTALPSGSCVDTLLKDLCKMYTTLTALVRYYLQVCQSSGGIPKNMEKLVK 1139
TLLTFFHELVQTALPSGSCVDTLLKDLCKMYTTLTALVRYYLQVCQSSGGIPKNMEKLVK
Sbjct: 1140 TLLTFFHELVQTALPSGSCVDTLLKDLCKMYTTLTALVRYYLQVCQSSGGIPKNMEKLVK 1199
Query: 1140 LSGSHLTPLCYSFISYVQNKSKSLNYTGEKKEKPAAVATAMARVLRETKPIPNLIFAIEQ 1199
LSGSHLTPLCYSFISYVQNKSKSLNYTGEKKEKPAAVATAMARVLRETKPIPNLIFAIEQ
Sbjct: 1200 LSGSHLTPLCYSFISYVQNKSKSLNYTGEKKEKPAAVATAMARVLRETKPIPNLIFAIEQ 1259
Query: 1200 YEKFLIHLSKKSKVNLMQHMKLSTSRDFKIKGNILDMVLREDGEDENEEGTASEHGGQNK 1259
YEKFLIHLSKKSKVNLMQHMKLSTSRDFKIKGNILDMVLREDGEDENEEGTASEHGGQNK
Sbjct: 1260 YEKFLIHLSKKSKVNLMQHMKLSTSRDFKIKGNILDMVLREDGEDENEEGTASEHGGQNK 1319
Query: 1260 EPAKKKRKK 1268
EPAKKKRKK
Sbjct: 1320 EPAKKKRKK 1328
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 39.3 bits (90), Expect = 0.024
Identities = 40/183 (21%), Positives = 86/183 (46%), Gaps = 17/183 (9%)
Query: 842 KSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEEREDADVSVTQRTAFQIRQ 901
K++S C LQ + S + ++Y P ++ + A D + E+ D + Q ++++
Sbjct: 1193 KAVSEECSYFLQTLCSVLGEYYTPALKCEVNAEDKENSGDYISENEDPEL-QDYRYEVQD 1251
Query: 902 FQRSLLNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKICKENSRED 961
FQ ++ LL+ E++N L+ + T LSK+ + +++ + KE + +
Sbjct: 1252 FQENMHTLLNKVTEEYNK-----LLVLQTRLSKIWGQQT-DGMKLEFGEENLPKEET--E 1303
Query: 962 ALFCKSLMNLLFSLHVSYKSPVILLRDLS--------QDIHGHLGDIDQDVEVEKTNHFA 1013
L S M L + V++KS + L+DL Q++ + + Q ++ + N+ A
Sbjct: 1304 FLSIHSQMTNLEDIDVNHKSKLSSLQDLEKTKLEEQVQELESLISSLQQQLKETEQNYEA 1363
Query: 1014 IVN 1016
++
Sbjct: 1364 EIH 1366
>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length = 3899
Score = 39.3 bits (90), Expect = 0.024
Identities = 40/183 (21%), Positives = 86/183 (46%), Gaps = 17/183 (9%)
Query: 842 KSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEEREDADVSVTQRTAFQIRQ 901
K++S C LQ + S + ++Y P ++ + A D + E+ D + Q ++++
Sbjct: 1193 KAVSEECSYFLQTLCSVLGEYYTPALKCEVNAEDKENSGDYISENEDPEL-QDYRYEVQD 1251
Query: 902 FQRSLLNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKICKENSRED 961
FQ ++ LL+ E++N L+ + T LSK+ + +++ + KE + +
Sbjct: 1252 FQENMHTLLNKVTEEYNK-----LLVLQTRLSKIWGQQT-DGMKLEFGEENLPKEET--E 1303
Query: 962 ALFCKSLMNLLFSLHVSYKSPVILLRDLS--------QDIHGHLGDIDQDVEVEKTNHFA 1013
L S M L + V++KS + L+DL Q++ + + Q ++ + N+ A
Sbjct: 1304 FLSIHSQMTNLEDIDVNHKSKLSSLQDLEKTKLEEQVQELESLISSLQQQLKETEQNYEA 1363
Query: 1014 IVN 1016
++
Sbjct: 1364 EIH 1366
>gi|217272804 hyaluronan-mediated motility receptor isoform d [Homo
sapiens]
Length = 638
Score = 39.3 bits (90), Expect = 0.024
Identities = 82/378 (21%), Positives = 152/378 (40%), Gaps = 46/378 (12%)
Query: 714 IKSELEDFELDKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILS 773
+++ELE E +A + TS+ N A L + E+ S FS+N + L
Sbjct: 22 LETELEKMEARLNAALREKTSLSANN---ATLEKQLIELTRTNELLKSKFSENGNQKNLR 78
Query: 774 LFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLLTALFRVLLWRYTSIPTSVE 833
+ +L + N++ K + MA + + SL + ++ + S+E
Sbjct: 79 ILSL--ELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLV--SIE 134
Query: 834 ESGKKEKGKSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEEREDADVSVTQ 893
+ EK ++ LL E +++I A Q + K LD+ E +E D ++
Sbjct: 135 KEKIDEKSETEKLL--EYIEEISCASDQVEKYK-------LDIAQLEENLKEKNDEILS- 184
Query: 894 RTAFQIRQFQRSLLNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKI 953
++Q + +LS Q ED N K LL +++ E + +M + K
Sbjct: 185 -----LKQSLEENIVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKF 239
Query: 954 CKENSREDALFCKSLM---------NLLFSLH---VSYKSPVILLRDL-SQDIHGHLGDI 1000
E + L K L L SLH S++ ++ ++L +++ L ++
Sbjct: 240 ILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDEL 299
Query: 1001 DQDVEVEKTNHFAIVNLRTAAPTVCLLVLSQAEKVLEEVDWLITKLKGQVSQETLSEEAS 1060
D+ + E+ + L +A+ EE+ L KLKG+ ++ S A
Sbjct: 300 DKLQQKEEQAERLVKQLE-----------EEAKSRAEELKLLEEKLKGKEAELEKSSAAH 348
Query: 1061 SQATLPNQPVEKAIIMQL 1078
+QATL Q +++ L
Sbjct: 349 TQATLLLQEKYDSMVQSL 366
>gi|217272802 hyaluronan-mediated motility receptor isoform a [Homo
sapiens]
Length = 725
Score = 39.3 bits (90), Expect = 0.024
Identities = 82/378 (21%), Positives = 152/378 (40%), Gaps = 46/378 (12%)
Query: 714 IKSELEDFELDKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILS 773
+++ELE E +A + TS+ N A L + E+ S FS+N + L
Sbjct: 109 LETELEKMEARLNAALREKTSLSANN---ATLEKQLIELTRTNELLKSKFSENGNQKNLR 165
Query: 774 LFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLLTALFRVLLWRYTSIPTSVE 833
+ +L + N++ K + MA + + SL + ++ + S+E
Sbjct: 166 ILSL--ELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLV--SIE 221
Query: 834 ESGKKEKGKSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEEREDADVSVTQ 893
+ EK ++ LL E +++I A Q + K LD+ E +E D ++
Sbjct: 222 KEKIDEKSETEKLL--EYIEEISCASDQVEKYK-------LDIAQLEENLKEKNDEILS- 271
Query: 894 RTAFQIRQFQRSLLNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKI 953
++Q + +LS Q ED N K LL +++ E + +M + K
Sbjct: 272 -----LKQSLEENIVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKF 326
Query: 954 CKENSREDALFCKSLM---------NLLFSLH---VSYKSPVILLRDL-SQDIHGHLGDI 1000
E + L K L L SLH S++ ++ ++L +++ L ++
Sbjct: 327 ILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDEL 386
Query: 1001 DQDVEVEKTNHFAIVNLRTAAPTVCLLVLSQAEKVLEEVDWLITKLKGQVSQETLSEEAS 1060
D+ + E+ + L +A+ EE+ L KLKG+ ++ S A
Sbjct: 387 DKLQQKEEQAERLVKQLE-----------EEAKSRAEELKLLEEKLKGKEAELEKSSAAH 435
Query: 1061 SQATLPNQPVEKAIIMQL 1078
+QATL Q +++ L
Sbjct: 436 TQATLLLQEKYDSMVQSL 453
>gi|217416398 hyaluronan-mediated motility receptor isoform c [Homo
sapiens]
Length = 709
Score = 39.3 bits (90), Expect = 0.024
Identities = 82/378 (21%), Positives = 152/378 (40%), Gaps = 46/378 (12%)
Query: 714 IKSELEDFELDKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILS 773
+++ELE E +A + TS+ N A L + E+ S FS+N + L
Sbjct: 93 LETELEKMEARLNAALREKTSLSANN---ATLEKQLIELTRTNELLKSKFSENGNQKNLR 149
Query: 774 LFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLLTALFRVLLWRYTSIPTSVE 833
+ +L + N++ K + MA + + SL + ++ + S+E
Sbjct: 150 ILSL--ELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLV--SIE 205
Query: 834 ESGKKEKGKSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEEREDADVSVTQ 893
+ EK ++ LL E +++I A Q + K LD+ E +E D ++
Sbjct: 206 KEKIDEKSETEKLL--EYIEEISCASDQVEKYK-------LDIAQLEENLKEKNDEILS- 255
Query: 894 RTAFQIRQFQRSLLNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKI 953
++Q + +LS Q ED N K LL +++ E + +M + K
Sbjct: 256 -----LKQSLEENIVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKF 310
Query: 954 CKENSREDALFCKSLM---------NLLFSLH---VSYKSPVILLRDL-SQDIHGHLGDI 1000
E + L K L L SLH S++ ++ ++L +++ L ++
Sbjct: 311 ILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDEL 370
Query: 1001 DQDVEVEKTNHFAIVNLRTAAPTVCLLVLSQAEKVLEEVDWLITKLKGQVSQETLSEEAS 1060
D+ + E+ + L +A+ EE+ L KLKG+ ++ S A
Sbjct: 371 DKLQQKEEQAERLVKQLE-----------EEAKSRAEELKLLEEKLKGKEAELEKSSAAH 419
Query: 1061 SQATLPNQPVEKAIIMQL 1078
+QATL Q +++ L
Sbjct: 420 TQATLLLQEKYDSMVQSL 437
>gi|217416394 hyaluronan-mediated motility receptor isoform b [Homo
sapiens]
Length = 724
Score = 39.3 bits (90), Expect = 0.024
Identities = 82/378 (21%), Positives = 152/378 (40%), Gaps = 46/378 (12%)
Query: 714 IKSELEDFELDKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILS 773
+++ELE E +A + TS+ N A L + E+ S FS+N + L
Sbjct: 108 LETELEKMEARLNAALREKTSLSANN---ATLEKQLIELTRTNELLKSKFSENGNQKNLR 164
Query: 774 LFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLLTALFRVLLWRYTSIPTSVE 833
+ +L + N++ K + MA + + SL + ++ + S+E
Sbjct: 165 ILSL--ELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLV--SIE 220
Query: 834 ESGKKEKGKSISLLCLEGLQKIFSAVQQFYQPKIQQFLRALDVTDKEGEEREDADVSVTQ 893
+ EK ++ LL E +++I A Q + K LD+ E +E D ++
Sbjct: 221 KEKIDEKSETEKLL--EYIEEISCASDQVEKYK-------LDIAQLEENLKEKNDEILS- 270
Query: 894 RTAFQIRQFQRSLLNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKI 953
++Q + +LS Q ED N K LL +++ E + +M + K
Sbjct: 271 -----LKQSLEENIVILSKQVEDLNVKCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKF 325
Query: 954 CKENSREDALFCKSLM---------NLLFSLH---VSYKSPVILLRDL-SQDIHGHLGDI 1000
E + L K L L SLH S++ ++ ++L +++ L ++
Sbjct: 326 ILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDEL 385
Query: 1001 DQDVEVEKTNHFAIVNLRTAAPTVCLLVLSQAEKVLEEVDWLITKLKGQVSQETLSEEAS 1060
D+ + E+ + L +A+ EE+ L KLKG+ ++ S A
Sbjct: 386 DKLQQKEEQAERLVKQLE-----------EEAKSRAEELKLLEEKLKGKEAELEKSSAAH 434
Query: 1061 SQATLPNQPVEKAIIMQL 1078
+QATL Q +++ L
Sbjct: 435 TQATLLLQEKYDSMVQSL 452
>gi|66528888 Fanconi anemia complementation group D2 isoform b [Homo
sapiens]
Length = 1451
Score = 38.9 bits (89), Expect = 0.032
Identities = 88/488 (18%), Positives = 189/488 (38%), Gaps = 86/488 (17%)
Query: 404 IETSPSLSRMPNQHACKLGANILLETFKIHEMI-RQEILEQVLNRVVTRASSPISHFLDL 462
+ + SL +Q G+ + FK + +QE++ ++ + + + + LD+
Sbjct: 436 LSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTHICSGNEAEVDTALDV 495
Query: 463 LSNIVMYAPLVLQSCSSKVTEAFDYLSFLPLQTVQRLLKAVQPLL-----KVSMSMRDCL 517
L +V+ P + + V DYL + Q +++L + L + S ++D +
Sbjct: 496 LLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLAFSKQNEASSHIQDDM 555
Query: 518 ILVLRKAMFANQLDARKSAVAGFLLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNS 577
LV+RK + + + + G + + + ++ S+S S++Q ++
Sbjct: 556 HLVIRKQLSSTVFKYKLIGIIGAV-------TMAGIMAADRSESPSLTQERANLSD--EQ 606
Query: 578 VANETFCLEIMDSLRRCLSQQADVRLMLYEGFYDVLRR---NSQLANSVMQTLLSQLKQF 634
T L+++ S C Q + Y+ F ++++ + + V T+ +
Sbjct: 607 CTQVTSLLQLVHS---CSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICN----- 658
Query: 635 YEPKPDLLPPLKLEACILTQGDKISLQEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEE 694
D +++C++ +GD P+ L G EE +
Sbjct: 659 -----DFQDAFVVDSCVVPEGD---FPFPVKAL-------------------YGLEEYDT 691
Query: 695 EEAFYEDLDDILESITNRMIKSELEDFELDKSADFSQSTSIGIKNNICAFLVMGVCEVLI 754
++ +L +L S +DF D SQ + + + +C + + +
Sbjct: 692 QDGIAINLLPLLFS----------QDFAKDGGPVTSQESGQKLVSPLCLAPYFRLLRLCV 741
Query: 755 EYNFSISSFSKNRFEDILSLFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLL 814
E + E+I L C L+D+ E K ++ A + S F+ SL
Sbjct: 742 ERQHN------GNLEEIDGLLDCPIFLTDL--EPGEKLESMSAKERS-------FMCSL- 785
Query: 815 TALFRVLLWRYTSIPTSVEESGKKEKGKSIS----LLCLEGLQKIFSAVQQFYQPKIQQF 870
+F L W + +E+ + KGK ++ ++ L+ + + + AV Y P + F
Sbjct: 786 --IFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPLGNF 843
Query: 871 -LRALDVT 877
+ LD+T
Sbjct: 844 DVETLDIT 851
>gi|21361861 Fanconi anemia complementation group D2 isoform a [Homo
sapiens]
Length = 1471
Score = 38.9 bits (89), Expect = 0.032
Identities = 88/488 (18%), Positives = 189/488 (38%), Gaps = 86/488 (17%)
Query: 404 IETSPSLSRMPNQHACKLGANILLETFKIHEMI-RQEILEQVLNRVVTRASSPISHFLDL 462
+ + SL +Q G+ + FK + +QE++ ++ + + + + LD+
Sbjct: 436 LSLAQSLLHSLDQSIISFGSLLYKYAFKFFDTYCQQEVVGALVTHICSGNEAEVDTALDV 495
Query: 463 LSNIVMYAPLVLQSCSSKVTEAFDYLSFLPLQTVQRLLKAVQPLL-----KVSMSMRDCL 517
L +V+ P + + V DYL + Q +++L + L + S ++D +
Sbjct: 496 LLELVVLNPSAMMMNAVFVKGILDYLDNISPQQIRKLFYVLSTLAFSKQNEASSHIQDDM 555
Query: 518 ILVLRKAMFANQLDARKSAVAGFLLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNS 577
LV+RK + + + + G + + + ++ S+S S++Q ++
Sbjct: 556 HLVIRKQLSSTVFKYKLIGIIGAV-------TMAGIMAADRSESPSLTQERANLSD--EQ 606
Query: 578 VANETFCLEIMDSLRRCLSQQADVRLMLYEGFYDVLRR---NSQLANSVMQTLLSQLKQF 634
T L+++ S C Q + Y+ F ++++ + + V T+ +
Sbjct: 607 CTQVTSLLQLVHS---CSEQSPQASALYYDEFANLIQHEKLDPKALEWVGHTICN----- 658
Query: 635 YEPKPDLLPPLKLEACILTQGDKISLQEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEE 694
D +++C++ +GD P+ L G EE +
Sbjct: 659 -----DFQDAFVVDSCVVPEGD---FPFPVKAL-------------------YGLEEYDT 691
Query: 695 EEAFYEDLDDILESITNRMIKSELEDFELDKSADFSQSTSIGIKNNICAFLVMGVCEVLI 754
++ +L +L S +DF D SQ + + + +C + + +
Sbjct: 692 QDGIAINLLPLLFS----------QDFAKDGGPVTSQESGQKLVSPLCLAPYFRLLRLCV 741
Query: 755 EYNFSISSFSKNRFEDILSLFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSSLL 814
E + E+I L C L+D+ E K ++ A + S F+ SL
Sbjct: 742 ERQHN------GNLEEIDGLLDCPIFLTDL--EPGEKLESMSAKERS-------FMCSL- 785
Query: 815 TALFRVLLWRYTSIPTSVEESGKKEKGKSIS----LLCLEGLQKIFSAVQQFYQPKIQQF 870
+F L W + +E+ + KGK ++ ++ L+ + + + AV Y P + F
Sbjct: 786 --IFLTLNWFREIVNAFCQETSPEMKGKVLTRLKHIVELQIILEKYLAVTPDYVPPLGNF 843
Query: 871 -LRALDVT 877
+ LD+T
Sbjct: 844 DVETLDIT 851
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 34.3 bits (77), Expect = 0.78
Identities = 107/513 (20%), Positives = 205/513 (39%), Gaps = 41/513 (7%)
Query: 522 RKAMFANQLDARKSAVAGFLLLLKNFKVLGSLSSSQCSQSLSVSQVHVDVHSHYNSVANE 581
+KA L+A + L +NF + + SQ + + ++ NS+ E
Sbjct: 497 QKAREVCHLEAELKNIKQCLNQSQNFAE--EMKAKNTSQETMLRDLQEKINQQENSLTLE 554
Query: 582 TFCLEIMD--SLRRCLSQQADVRLMLYEGFYDVLRRNSQLANSVMQTLLSQLKQFYEPKP 639
L + D R C R E D L + + + +++ L + K++ E K
Sbjct: 555 KLKLAVADLEKQRDCSQDLLKKREHHIEQLNDKLSKTEKESKALLSALELKKKEYEELKE 614
Query: 640 D--LLPPLKLE-ACILTQ--GDKISLQEPLDYLLCCI---QHCLAWYKNTVIPLQQGEEE 691
+ L K E +LTQ +K +LQ +++L C+ Q Y V L+ E
Sbjct: 615 EKTLFSCWKSENEKLLTQMESEKENLQSKINHLETCLKTQQIKSHEYNERVRTLEMDREN 674
Query: 692 EEEEEAFYEDLDDILESITNRMIKSELEDFELDKSADFSQSTSIGIKNNIC--AFLVMGV 749
E +L ++L+S + + +L EL + A+FS N+C + G
Sbjct: 675 LSVE---IRNLHNVLDSKSVEVETQKLAYMELQQKAEFSDQKHQKEIENMCLKTSQLTGQ 731
Query: 750 CEVLIEYNFSISSFSKNRFEDILSLFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKF 809
E L +S+ ++ L Y+ L D+L K T ++ SLL+
Sbjct: 732 VEDLEHKLQLLSNEIMDKDRCYQDLHAEYESLRDLLKSKDASLVTNEDHQR--SLLAFDQ 789
Query: 810 VSSLLTALFRVLLWRYTSIPTSVE----ESGKKEKGKSISLLCLEGLQKIFSAVQQFYQP 865
++ + F ++ S+P+ E+ + K +I ++ L+ + +Q
Sbjct: 790 QPAMHHS-FANIIGEQGSMPSERSECRLEADQSPKNSAILQNRVDSLEFSLESQKQMNSD 848
Query: 866 KIQQFLRALDVTDKEGEEREDADVSVTQRTAFQIRQFQRSLLNLLSSQEEDFNSKEALLL 925
+Q + + +GE E+ + +F QR +S +ED ++ + ++
Sbjct: 849 LQKQCEELVQI---KGEIEENLMKAEQMHQSFVAETSQR-----ISKLQEDTSAHQNVVA 900
Query: 926 VTV--LTSLSKLLEPSSPQFVQMLSWTSKICKENS-REDALFCKSLMNLLFSLHVSYKSP 982
T+ L + K L+ + + + ++ K N ED+L L++ SL S
Sbjct: 901 ETLSALENKEKELQLLNDKVETEQAEIQELKKSNHLLEDSLKELQLLSETLSLEKKEMSS 960
Query: 983 VILL-----RDLSQDIHGHLGDIDQDVEVEKTN 1010
+I L +L+Q+ +G L +I+ + EK N
Sbjct: 961 IISLNKREIEELTQE-NGTLKEINASLNQEKMN 992
>gi|4508005 tripartite motif-containing 26 [Homo sapiens]
Length = 539
Score = 33.5 bits (75), Expect = 1.3
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 686 QQGEEEEEEEEAFYEDLDDILESITNRMIKSELEDFELDKSADFSQSTSIGI 737
++GEEEEEEEEA Y D D E+ + + E+ E ++ + +S +G+
Sbjct: 390 EEGEEEEEEEEAGYGDGYDDWETDEDEESLGDEEEEEEEEEEEVLESCMVGV 441
>gi|7662316 HIV-1 Vpr binding protein [Homo sapiens]
Length = 1507
Score = 33.1 bits (74), Expect = 1.7
Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 6/53 (11%)
Query: 686 QQGEEEEEEEEAFYEDLDDILESITNRMIKSELEDFELDKSA------DFSQS 732
++ E+EEE+++ +D DD+ E T++++++ELE+ + +++A DFS S
Sbjct: 1405 EEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDDNNENAGEDGDNDFSPS 1457
>gi|39995064 pannexin 1 [Homo sapiens]
Length = 426
Score = 33.1 bits (74), Expect = 1.7
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 325 QVLDLLKTSVVKSFK-----DLQLLQGSKFLQ-NLVPHRSYVSTMILEVVKNSVHSWDHV 378
+V ++L T V FK DL L + FL+ N+ +SY +LE +K+S D +
Sbjct: 307 KVYEILPTFDVLHFKSEGYNDLSLY--NLFLEENISEVKSYKCLKVLENIKSSGQGIDPM 364
Query: 379 TQGLVELGFILMDSYGPKKVLDGKTIETSPSLSRMPNQHACKLGANILLET 429
L LG I MD V+DGKT ++ NQ A G NI ET
Sbjct: 365 LL-LTNLGMIKMD------VVDGKTPMSAEMREEQGNQTAELQGMNIDSET 408
>gi|156104869 chloride channel 2 [Homo sapiens]
Length = 898
Score = 32.7 bits (73), Expect = 2.3
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 31 NLLQNQAVKGKVAGALLRAIFKGSP----CSEEAGTLRRRKIYTCCIQLVESGDLQKEIA 86
NL ++ + AG LR++F GSP SE+ + +RK+ I L DL+ E++
Sbjct: 708 NLGESPTGSAESAGIALRSLFCGSPPPEAASEKLESCEKRKLKRVRISLASDADLEGEMS 767
Query: 87 SEII 90
E I
Sbjct: 768 PEEI 771
>gi|226246630 tryptophan rich basic protein isoform 2 [Homo sapiens]
Length = 140
Score = 32.7 bits (73), Expect = 2.3
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 770 DILSLFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSS-----LLTALFRVLLWR 824
+++ F Y +L +N+ K KT + +T+ L +K+V S L AL L+W+
Sbjct: 30 NMMDEFARYARLERKINKMTDKLKTHVKARTAQ-LAKIKWVISVAFYVLQAALMISLIWK 88
Query: 825 YTSIPTSVEES 835
Y S+P +V S
Sbjct: 89 YYSVPVAVVPS 99
>gi|21536428 tryptophan rich basic protein isoform 1 [Homo sapiens]
Length = 174
Score = 32.7 bits (73), Expect = 2.3
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 770 DILSLFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSS-----LLTALFRVLLWR 824
+++ F Y +L +N+ K KT + +T+ L +K+V S L AL L+W+
Sbjct: 64 NMMDEFARYARLERKINKMTDKLKTHVKARTAQ-LAKIKWVISVAFYVLQAALMISLIWK 122
Query: 825 YTSIPTSVEES 835
Y S+P +V S
Sbjct: 123 YYSVPVAVVPS 133
>gi|65287717 eukaryotic translation initiation factor 2 alpha kinase 4
[Homo sapiens]
Length = 1649
Score = 32.7 bits (73), Expect = 2.3
Identities = 42/189 (22%), Positives = 82/189 (43%), Gaps = 19/189 (10%)
Query: 899 IRQFQRSLLNLLSSQEEDFNSKEALLLVTVLTSLSKLLEPSSPQFVQMLSWTSKICKENS 958
+ Q+Q+ + L+SQE++ K + T + L++ S P V+ L+ K ++
Sbjct: 314 VLQWQKKMGPFLTSQEKEKIDKCKKQIQGTETEFNSLVKLSHPNVVRYLAMNLKEQDDSI 373
Query: 959 REDALFCKSLMNLLFSLHVSYKSPVIL--LRDLSQDIHGHLGDIDQDVEVEKTNHFAIVN 1016
D L + + + + H+S+ P+ + LR + + L + + V K + N
Sbjct: 374 VVDIL-VEHISGVSLAAHLSHSGPIPVHQLRRYTAQLLSGLDYLHSNSVVHKV--LSASN 430
Query: 1017 LRTAAPTVCLLVLSQAEKVLEEVDWLITKLKGQVSQETLSEEAS---SQATLPNQPVEKA 1073
VL AE ++ D+ I+K + +E + E+ S LP + +K
Sbjct: 431 -----------VLVDAEGTVKITDYSISKRLADICKEDVFEQTRVRFSDNALPYKTGKKG 479
Query: 1074 IIMQLGTLL 1082
+ +LG LL
Sbjct: 480 DVWRLGLLL 488
>gi|189217904 RPGRIP1-like isoform b [Homo sapiens]
Length = 1235
Score = 32.3 bits (72), Expect = 3.0
Identities = 48/257 (18%), Positives = 103/257 (40%), Gaps = 36/257 (14%)
Query: 651 ILTQGDKISLQEPLDYLLCCIQ----HCLAWYKNTVIPLQQGEEE-EEEEEAFYEDLDDI 705
++ GD++++Q L CC H + + + + LQ + E+E E E+ D +
Sbjct: 306 LMANGDELNMQLKEQRLKCCSLEKQLHSMKFSERRIEELQDRINDLEKERELLKENYDKL 365
Query: 706 LES-----------ITNRMIKSELEDFELDKSADFSQSTSI----GIKNNICAFLVMGVC 750
+S + + +K ++ E +D + T I + + LV
Sbjct: 366 YDSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTERDQNEKLVQENR 425
Query: 751 EVLIEYNFSISSFSKNRFEDILSLFMCYKKLSDILNEKAGKA----KTKMANKTSDSLLS 806
E+ ++Y K + +++ Y + +DI ++ +A K + K D
Sbjct: 426 ELQLQY-----LEQKQQLDELKKRIKLYNQENDINADELSEALLLIKAQKEQKNGDLSFL 480
Query: 807 MKFVSSLLTALFRVLLWRYTSIPTSVEESGK-------KEKGKSISLLCLEGLQKIFSAV 859
+K S + L R + + +V+E K + K + +E + + +
Sbjct: 481 VKVDSEINKDLERSMRELQATHAETVQELEKTRNMLIMQHKINKDYQMEVEAVTRKMENL 540
Query: 860 QQFYQPKIQQFLRALDV 876
QQ Y+ K++Q++ LD+
Sbjct: 541 QQDYELKVEQYVHLLDI 557
>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
Length = 1315
Score = 32.3 bits (72), Expect = 3.0
Identities = 48/257 (18%), Positives = 103/257 (40%), Gaps = 36/257 (14%)
Query: 651 ILTQGDKISLQEPLDYLLCCIQ----HCLAWYKNTVIPLQQGEEE-EEEEEAFYEDLDDI 705
++ GD++++Q L CC H + + + + LQ + E+E E E+ D +
Sbjct: 306 LMANGDELNMQLKEQRLKCCSLEKQLHSMKFSERRIEELQDRINDLEKERELLKENYDKL 365
Query: 706 LES-----------ITNRMIKSELEDFELDKSADFSQSTSI----GIKNNICAFLVMGVC 750
+S + + +K ++ E +D + T I + + LV
Sbjct: 366 YDSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTERDQNEKLVQENR 425
Query: 751 EVLIEYNFSISSFSKNRFEDILSLFMCYKKLSDILNEKAGKA----KTKMANKTSDSLLS 806
E+ ++Y K + +++ Y + +DI ++ +A K + K D
Sbjct: 426 ELQLQY-----LEQKQQLDELKKRIKLYNQENDINADELSEALLLIKAQKEQKNGDLSFL 480
Query: 807 MKFVSSLLTALFRVLLWRYTSIPTSVEESGK-------KEKGKSISLLCLEGLQKIFSAV 859
+K S + L R + + +V+E K + K + +E + + +
Sbjct: 481 VKVDSEINKDLERSMRELQATHAETVQELEKTRNMLIMQHKINKDYQMEVEAVTRKMENL 540
Query: 860 QQFYQPKIQQFLRALDV 876
QQ Y+ K++Q++ LD+
Sbjct: 541 QQDYELKVEQYVHLLDI 557
>gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]
Length = 716
Score = 32.0 bits (71), Expect = 3.9
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 658 ISLQEPLDYLLCCIQHCLAWYK-NTVIPLQQGEEEEEEEEAFYEDLDDILESITNRMIKS 716
I L E L + +QH L+ + N +Q+ EEEEEEE+ +D D I + + ++
Sbjct: 535 IDLVESLSNWVHHVQHILSQGRCNWFNSIQKNEEEEEEEDEEKDDSDYIEQEVGLPLLTP 594
Query: 717 ELEDFEL 723
ED E+
Sbjct: 595 ISEDLEI 601
>gi|27597090 suppressor of Ty 6 homolog [Homo sapiens]
Length = 1726
Score = 32.0 bits (71), Expect = 3.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 1230 KGNILDMVLREDGEDENEEGTASEHGGQNKEPAKKKRKK 1268
+GN+ + +D EDE EE S+ G + KKRK+
Sbjct: 51 QGNLKGFINDDDDEDEGEEDEGSDSGDSEDDVGHKKRKR 89
>gi|153070822 methylmalonic aciduria (cobalamin deficiency) cblC
type, with homocystinuria [Homo sapiens]
Length = 282
Score = 31.2 bits (69), Expect = 6.6
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 639 PDLLPPLKLEACILTQGDKISLQEPLDYLLCCIQHCLAW-YKNTVIPLQQGEEEEE 693
PDL PP K C+ T+ D+I+L E ++ H W Y++ V P ++ EE++
Sbjct: 172 PDL-PPRKPHDCVPTRADRIALLEGFNF------HWRDWTYRDAVTPQERYSEEQK 220
>gi|117414135 apoptosis inhibitor [Homo sapiens]
Length = 127
Score = 31.2 bits (69), Expect = 6.6
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 724 DKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILSLFM--CYKKL 781
D S S+S ++ + ++ +++ ++ S F+K ++ + +M +KL
Sbjct: 32 DDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQESIFTKEAYKKYIKDYMKSINEKL 91
Query: 782 SDILNEKAGKAKTKMANKTSDSLLSMKFVSSLL 814
+ E+ T M NK+S SLL K SSLL
Sbjct: 92 EEQRPERVKLFITGMKNKSSTSLLIFKTTSSLL 124
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 30.8 bits (68), Expect = 8.6
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 686 QQGEEEEEEEEAF----YEDLDDILESITNRMIKSELEDFELDKSADFSQSTSIGIKN 739
++ EEEEEEEEA EDL+ + E + + E E+ K D S +S+ I N
Sbjct: 447 EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISN 504
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 30.8 bits (68), Expect = 8.6
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 686 QQGEEEEEEEEAF----YEDLDDILESITNRMIKSELEDFELDKSADFSQSTSIGIKN 739
++ EEEEEEEEA EDL+ + E + + E E+ K D S +S+ I N
Sbjct: 447 EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISN 504
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 30.8 bits (68), Expect = 8.6
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 686 QQGEEEEEEEEAF----YEDLDDILESITNRMIKSELEDFELDKSADFSQSTSIGIKN 739
++ EEEEEEEEA EDL+ + E + + E E+ K D S +S+ I N
Sbjct: 459 EEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISN 516
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 30.8 bits (68), Expect = 8.6
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 661 QEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEEEEAFYEDLDDILESITNRMIKSELED 720
Q+ LD+ + HC I L EEE EEE L +LE + R++K + E
Sbjct: 2029 QDLLDFHQDLLAHC-------GIQLDGEEEEPEEETTLGSRLMSLLEKV--RLVKKKEEK 2079
Query: 721 FELDKSADFSQSTSI 735
E ++SA+ S+ S+
Sbjct: 2080 PEEERSAEESKPRSL 2094
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 30.8 bits (68), Expect = 8.6
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 661 QEPLDYLLCCIQHCLAWYKNTVIPLQQGEEEEEEEEAFYEDLDDILESITNRMIKSELED 720
Q+ LD+ + HC I L EEE EEE L +LE + R++K + E
Sbjct: 2029 QDLLDFHQDLLAHC-------GIQLDGEEEEPEEETTLGSRLMSLLEKV--RLVKKKEEK 2079
Query: 721 FELDKSADFSQSTSI 735
E ++SA+ S+ S+
Sbjct: 2080 PEEERSAEESKPRSL 2094
>gi|23957698 luman-recruiting factor [Homo sapiens]
Length = 639
Score = 30.8 bits (68), Expect = 8.6
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Query: 685 LQQGEEEEEEEEAFYEDLDDILESITNRMIKSELEDFELDKSADFSQSTSI 735
L + EEEEEEEE + +D DD + + +E D D + TSI
Sbjct: 379 LSENEEEEEEEEDYEDDKDDDISDTFSE------PGYENDSVEDLKEVTSI 423
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,389,205
Number of Sequences: 37866
Number of extensions: 1773051
Number of successful extensions: 7866
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 7775
Number of HSP's gapped (non-prelim): 114
length of query: 1268
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1154
effective length of database: 13,930,794
effective search space: 16076136276
effective search space used: 16076136276
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.