TRIM16L 36372

Name: TRIM16L	Sequence: fasta or formatted (348aa)		NCBI GI: 82617564
Description: tripartite motif-containing 16-like		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 22 2 C cysteine 1.1 4 1 D aspartate 3.4 12 1 E glutamate 10.1 35 3 F phenylalanine 5.5 19 1 G glycine 5.2 18 2 H histidine 2.3 8 1 I isoleucine 4.9 17 1 K lysine 7.8 27 3 L leucine 8.9 31 2 M methionine 1.7 6 1 N asparagine 3.2 11 2 P proline 4.6 16 1 Q glutamine 5.2 18 2 R arginine 4.0 14 1 S serine 7.2 25 2 T threonine 5.7 20 2 V valine 5.5 19 1 W tryptophan 2.3 8 1 Y tyrosine 5.2 18 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tripartite motif-containing 16-like TRIM16 0.975 tripartite motif-containing 16 TRIM47 0.100 tripartite motif-containing 47 TRIM39 0.078 tripartite motif-containing 39 isoform 1 TRIM14 0.078 tripartite motif protein TRIM14 isoform alpha TRIM14 0.078 tripartite motif protein TRIM14 isoform alpha TRIM14 0.078 tripartite motif protein TRIM14 isoform alpha TRIM39 0.077 tripartite motif-containing 39 isoform 2 TRIM25 0.074 tripartite motif-containing 25 BTN2A1 0.073 butyrophilin, subfamily 2, member A1 isoform 1 precur... BTN2A2 0.071 butyrophilin, subfamily 2, member A2 isoform b [Homo... BTN2A2 0.071 butyrophilin, subfamily 2, member A2 isoform a TRIM27 0.070 ret finger protein BTN1A1 0.067 butyrophilin, subfamily 1, member A1 TRIM11 0.062 tripartite motif-containing 11 TRIM58 0.060 tripartite motif-containing 58 TRIM21 0.058 tripartite motif protein 21 BTNL9 0.055 butyrophilin-like 9 TRIM7 0.055 tripartite motif-containing 7 isoform 1 ERMAP 0.054 erythroblast membrane-associated protein precursor [... ERMAP 0.054 erythroblast membrane-associated protein precursor [... BTN3A3 0.054 butyrophilin, subfamily 3, member A3 isoform a BTN3A3 0.054 butyrophilin, subfamily 3, member A3 isoform b [Homo... TRIM41 0.051 tripartite motif-containing 41 isoform 1 TRIM4 0.051 tripartite motif protein TRIM4 isoform alpha TRIM4 0.051 tripartite motif protein TRIM4 isoform beta TRIM7 0.049 tripartite motif-containing 7 isoform 2 TRIM7 0.049 tripartite motif-containing 7 isoform 3 TRIM7 0.049 tripartite motif-containing 7 isoform 3 TRIM7 0.049 tripartite motif-containing 7 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.