| Name: HHLA3 | Sequence: fasta or formatted (114aa) | NCBI GI: 81295796 | |
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Description: HERV-H LTR-associating 3 isoform 2
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Referenced in: DNA Transposon and Retrovirus-related Sequences
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Other entries for this name:
alt prot [121aa] HERV-H LTR-associating 3 isoform 1 alt prot [76aa] HERV-H LTR-associating 3 isoform 3 | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 7.9 9 1 C cysteine 7.0 8 1 D aspartate 1.8 2 1 E glutamate 8.8 10 2 F phenylalanine 2.6 3 1 G glycine 5.3 6 1 H histidine 3.5 4 1 I isoleucine 2.6 3 1 K lysine 7.9 9 2 L leucine 5.3 6 2 M methionine 4.4 5 1 N asparagine 1.8 2 1 P proline 7.9 9 2 Q glutamine 5.3 6 1 R arginine 8.8 10 2 S serine 7.0 8 1 T threonine 7.0 8 1 V valine 2.6 3 1 W tryptophan 0.9 1 1 Y tyrosine 1.8 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 HERV-H LTR-associating 3 isoform 2 HHLA3 0.427 HERV-H LTR-associating 3 isoform 1 HHLA3 0.409 HERV-H LTR-associating 3 isoform 3 METTL3 0.045 methyltransferase like 3 HK3 0.023 hexokinase 3 INPP5B 0.014 inositol polyphosphate-5-phosphatase, 75kDa precurs... KCNQ2 0.014 potassium voltage-gated channel KQT-like protein 2 i... KCNQ2 0.014 potassium voltage-gated channel KQT-like protein 2 i... KCNQ2 0.014 potassium voltage-gated channel KQT-like protein 2 i... KCNQ2 0.014 potassium voltage-gated channel KQT-like protein 2 i... AMPD3 0.009 adenosine monophosphate deaminase 3 isoform 1A RTEL1 0.009 regulator of telomere elongation helicase 1 isoform ... RTEL1 0.009 regulator of telomere elongation helicase 1 isoform 1... ACSS2 0.009 acyl-CoA synthetase short-chain family member 2 iso... ACSS2 0.009 acyl-CoA synthetase short-chain family member 2 isofo... KIAA0776 0.009 hypothetical protein LOC23376 SKIV2L 0.009 superkiller viralicidic activity 2-like homolog [Hom... LSDP5 0.009 lipid storage droplet protein 5 SEMA5B 0.009 semaphorin 5B isoform 1 ERC2 0.005 cytomatrix protein p110 HCCA2 0.005 HCCA2 protein KIAA1244 0.005 brefeldin A-inhibited guanine nucleotide-exchange p...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
